Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
15:36:00 (1398426): wrapper (7.7.26015): starting
15:36:00 (1398426): wrapper: running run_atlas (--nthreads 3)
[2025-07-27 15:36:00] Arguments: --nthreads 3
[2025-07-27 15:36:00] Threads: 3
[2025-07-27 15:36:00] Checking for CVMFS
[2025-07-27 15:36:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 15:36:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 15:36:00] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 15:36:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 15:36:00] 2.9.2.0 3414332 8199 84392 148813 1 57 29757443 36864001 0 130560 0 5553012 99.988 304008 2070 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-27 15:36:00] CVMFS is ok
[2025-07-27 15:36:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 15:36:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 15:36:00] Further information can be found at the LHC@home message board.
[2025-07-27 15:36:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 15:36:00] Checking for apptainer binary...
[2025-07-27 15:36:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 15:36:00] Running /usr/bin/apptainer --version
[2025-07-27 15:36:00] apptainer version 1.3.6-4.2
[2025-07-27 15:36:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 15:36:00] thA371b
[2025-07-27 15:36:00] apptainer works
[2025-07-27 15:36:00] Set ATHENA_PROC_NUMBER=3
[2025-07-27 15:36:00] Set ATHENA_CORE_NUMBER=3
[2025-07-27 15:36:00] Starting ATLAS job with PandaID=6745835129
[2025-07-27 15:36:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 17:08:25]  *** The last 200 lines of the pilot log: ***
[2025-07-27 17:08:25]  lfn=log.45743349._045337.job.log.tgz.1
[2025-07-27 17:08:25]  mtime=0
[2025-07-27 17:08:25]  protocol_id=None
[2025-07-27 17:08:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 17:08:25]  replicas=None
[2025-07-27 17:08:25]  scope=mc23_13p6TeV
[2025-07-27 17:08:25]  status=None
[2025-07-27 17:08:25]  status_code=0
[2025-07-27 17:08:25]  storage_token=
[2025-07-27 17:08:25]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6745835129/log.45743349._045337.job.log.tgz.1
[2025-07-27 17:08:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9f/71/log.45743349._045337.job.log.tgz.1
[2025-07-27 17:08:25]  workdir=None
[2025-07-27 17:08:25] ]
[2025-07-27 17:08:25] 2025-07-27 15:07:50,087 | INFO     | transferring file log.45743349._045337.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6745835129/log.45743349._045337.job.log.tgz.1 to /local/data/boinc/
[2025-07-27 17:08:25] 2025-07-27 15:07:50,087 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6745835129/log.45743349._045337.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0453
[2025-07-27 17:08:25] 2025-07-27 15:07:50,100 | INFO     | adding to output.list: log.45743349._045337.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9f/71/log.45743349._045337.job.log.tg
[2025-07-27 17:08:25] 2025-07-27 15:07:50,100 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 17:08:25] 2025-07-27 15:07:50,100 | INFO     | summary of transferred files:
[2025-07-27 17:08:25] 2025-07-27 15:07:50,100 | INFO     |  -- lfn=log.45743349._045337.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 17:08:25] 2025-07-27 15:07:50,100 | INFO     | stage-out finished correctly
[2025-07-27 17:08:25] 2025-07-27 15:07:50,131 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 17:08:25] 2025-07-27 15:07:50,158 | INFO     | job 6745835129 has state=finished
[2025-07-27 17:08:25] 2025-07-27 15:07:50,158 | INFO     | preparing for final server update for job 6745835129 in state='finished'
[2025-07-27 17:08:25] 2025-07-27 15:07:50,752 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-07-27 17:08:25] 2025-07-27 15:07:50,753 | INFO     | this job has now completed (state=finished)
[2025-07-27 17:08:25] 2025-07-27 15:07:50,753 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 17:08:25] 2025-07-27 15:07:50,753 | INFO     | log transfer has been attempted: DONE
[2025-07-27 17:08:25] 2025-07-27 15:07:50,753 | INFO     | job 6745835129 has finished - writing final server update
[2025-07-27 17:08:25] 2025-07-27 15:07:50,753 | INFO     | total number of processed events: 400 (read)
[2025-07-27 17:08:25] 2025-07-27 15:07:50,753 | INFO     | executing command: lscpu
[2025-07-27 17:08:25] 2025-07-27 15:07:50,766 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 17:08:25] 2025-07-27 15:07:50,964 | INFO     | PID=1402071 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 17:08:25] 2025-07-27 15:07:52,928 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 17:08:25] 2025-07-27 15:07:52,930 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3956.8154166666664
[2025-07-27 17:08:25] 2025-07-27 15:07:52,931 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745835129/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 17:08:25] 2025-07-27 15:07:52,931 | INFO     | extracted standard info from prmon json
[2025-07-27 17:08:25] 2025-07-27 15:07:52,931 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 17:08:25] 2025-07-27 15:07:52,931 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 17:08:25] 2025-07-27 15:07:52,931 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 17:08:25] 2025-07-27 15:07:52,931 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 17:08:25] 2025-07-27 15:07:52,932 | INFO     | fitting pss+swap vs Time
[2025-07-27 17:08:25] 2025-07-27 15:07:52,932 | INFO     | sum of square deviations: 177275882.0
[2025-07-27 17:08:25] 2025-07-27 15:07:52,932 | INFO     | sum of deviations: -16081361436.000002
[2025-07-27 17:08:25] 2025-07-27 15:07:52,932 | INFO     | mean x: 1753626191.0
[2025-07-27 17:08:25] 2025-07-27 15:07:52,932 | INFO     | mean y: 2464059.6506024096
[2025-07-27 17:08:25] 2025-07-27 15:07:52,932 | INFO     | -- intersect: 159080485745.12146
[2025-07-27 17:08:25] 2025-07-27 15:07:52,932 | INFO     | intersect: 159080485745.12146
[2025-07-27 17:08:25] 2025-07-27 15:07:52,932 | INFO     | chi2: 0.1809245843298534
[2025-07-27 17:08:25] 2025-07-27 15:07:52,932 | INFO     | -- intersect: 159080485745.12146
[2025-07-27 17:08:25] 2025-07-27 15:07:52,933 | INFO     | current memory leak: -90.71 B/s (using 83 data points, chi2=0.18)
[2025-07-27 17:08:25] 2025-07-27 15:07:52,933 | INFO     | could have reported an average CPU frequency of 3970 MHz (7 samples)
[2025-07-27 17:08:25] 2025-07-27 15:07:52,933 | INFO     | ..............................
[2025-07-27 17:08:25] 2025-07-27 15:07:52,933 | INFO     | . Timing measurements:
[2025-07-27 17:08:25] 2025-07-27 15:07:52,933 | INFO     | . get job = 0 s
[2025-07-27 17:08:25] 2025-07-27 15:07:52,933 | INFO     | . initial setup = 1 s
[2025-07-27 17:08:25] 2025-07-27 15:07:52,933 | INFO     | . payload setup = 3 s
[2025-07-27 17:08:25] 2025-07-27 15:07:52,933 | INFO     | . stage-in = 0 s
[2025-07-27 17:08:25] 2025-07-27 15:07:52,933 | INFO     | . payload execution = 5484 s
[2025-07-27 17:08:25] 2025-07-27 15:07:52,933 | INFO     | . stage-out = 0 s
[2025-07-27 17:08:25] 2025-07-27 15:07:52,933 | INFO     | . log creation = 0 s
[2025-07-27 17:08:25] 2025-07-27 15:07:52,933 | INFO     | ..............................
[2025-07-27 17:08:25] 2025-07-27 15:07:53,092 | INFO     | 
[2025-07-27 17:08:25] 2025-07-27 15:07:53,092 | INFO     | job summary report
[2025-07-27 17:08:25] 2025-07-27 15:07:53,092 | INFO     | --------------------------------------------------
[2025-07-27 17:08:25] 2025-07-27 15:07:53,092 | INFO     | PanDA job id: 6745835129
[2025-07-27 17:08:25] 2025-07-27 15:07:53,092 | INFO     | task id: 45743349
[2025-07-27 17:08:25] 2025-07-27 15:07:53,092 | INFO     | errors: (none)
[2025-07-27 17:08:25] 2025-07-27 15:07:53,093 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 17:08:25] 2025-07-27 15:07:53,093 | INFO     | pilot state: finished 
[2025-07-27 17:08:25] 2025-07-27 15:07:53,093 | INFO     | transexitcode: 0
[2025-07-27 17:08:25] 2025-07-27 15:07:53,093 | INFO     | exeerrorcode: 0
[2025-07-27 17:08:25] 2025-07-27 15:07:53,093 | INFO     | exeerrordiag: 
[2025-07-27 17:08:25] 2025-07-27 15:07:53,093 | INFO     | exitcode: 0
[2025-07-27 17:08:25] 2025-07-27 15:07:53,093 | INFO     | exitmsg: OK
[2025-07-27 17:08:25] 2025-07-27 15:07:53,093 | INFO     | cpuconsumptiontime: 15805 s
[2025-07-27 17:08:25] 2025-07-27 15:07:53,093 | INFO     | nevents: 400
[2025-07-27 17:08:25] 2025-07-27 15:07:53,093 | INFO     | neventsw: 0
[2025-07-27 17:08:25] 2025-07-27 15:07:53,093 | INFO     | pid: 1408564
[2025-07-27 17:08:25] 2025-07-27 15:07:53,093 | INFO     | pgrp: 1408564
[2025-07-27 17:08:25] 2025-07-27 15:07:53,093 | INFO     | corecount: 3
[2025-07-27 17:08:25] 2025-07-27 15:07:53,093 | INFO     | event service: False
[2025-07-27 17:08:25] 2025-07-27 15:07:53,093 | INFO     | sizes: {0: 2397472, 2: 2397734, 11: 2397762, 5491: 2433493, 5494: 2433631}
[2025-07-27 17:08:25] 2025-07-27 15:07:53,093 | INFO     | --------------------------------------------------
[2025-07-27 17:08:25] 2025-07-27 15:07:53,093 | INFO     | 
[2025-07-27 17:08:25] 2025-07-27 15:07:53,093 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-27 17:08:25] 2025-07-27 15:07:53,106 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 17:08:25] 2025-07-27 15:07:53,106 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 17:08:25] 2025-07-27 15:07:53,106 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 17:08:25] 2025-07-27 15:07:53,106 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 17:08:25] 2025-07-27 15:07:53,106 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 17:08:25] 2025-07-27 15:07:53,106 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 17:08:25] 2025-07-27 15:07:53,106 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 17:08:25] 2025-07-27 15:07:53,106 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 17:08:25] 2025-07-27 15:07:53,106 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 17:08:25] 2025-07-27 15:07:53,106 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 17:08:25] 2025-07-27 15:07:53,106 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 17:08:25] 2025-07-27 15:07:53,106 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 17:08:25] 2025-07-27 15:07:53,106 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 17:08:25] 2025-07-27 15:07:53,106 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 17:08:25] 2025-07-27 15:07:53,106 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 17:08:25] 2025-07-27 15:07:53,106 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 17:08:25] 2025-07-27 15:07:53,106 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 17:08:25] 2025-07-27 15:07:53,106 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 17:08:25] 2025-07-27 15:07:53,106 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 17:08:25] 2025-07-27 15:07:53,106 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 17:08:25] 2025-07-27 15:07:53,106 | INFO     | job 6745835129 has completed (purged errors)
[2025-07-27 17:08:25] 2025-07-27 15:07:53,107 | INFO     | overall cleanup function is called
[2025-07-27 17:08:25] 2025-07-27 15:07:54,113 | INFO     | --- collectZombieJob: --- 10, [1408564]
[2025-07-27 17:08:25] 2025-07-27 15:07:54,113 | INFO     | zombie collector waiting for pid 1408564
[2025-07-27 17:08:25] 2025-07-27 15:07:54,113 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 17:08:25] 2025-07-27 15:07:54,113 | INFO     | collected zombie processes
[2025-07-27 17:08:25] 2025-07-27 15:07:54,113 | INFO     | will attempt to kill all subprocesses of pid=1408564
[2025-07-27 17:08:25] 2025-07-27 15:07:54,160 | INFO     | process IDs to be killed: [1408564] (in reverse order)
[2025-07-27 17:08:25] 2025-07-27 15:07:54,184 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 17:08:25] 2025-07-27 15:07:54,184 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 17:08:25] 2025-07-27 15:07:54,188 | INFO     | did not find any defunct processes belonging to 1408564
[2025-07-27 17:08:25] 2025-07-27 15:07:54,190 | INFO     | did not find any defunct processes belonging to 1408564
[2025-07-27 17:08:25] 2025-07-27 15:07:54,190 | INFO     | ready for new job
[2025-07-27 17:08:25] 2025-07-27 15:07:54,190 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 17:08:25] 2025-07-27 15:07:54,191 | INFO     | ***************************************
[2025-07-27 17:08:25] 2025-07-27 15:07:54,191 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 17:08:25] 2025-07-27 15:07:54,191 | INFO     | ***************************************
[2025-07-27 17:08:25] 2025-07-27 15:07:54,191 | INFO     | 
[2025-07-27 17:08:25] 2025-07-27 15:07:54,191 | INFO     | architecture information:
[2025-07-27 17:08:25] 2025-07-27 15:07:54,192 | INFO     | executing command: cat /etc/os-release
[2025-07-27 17:08:25] 2025-07-27 15:07:54,201 | INFO     | cat /etc/os-release:
[2025-07-27 17:08:25] NAME="CentOS Linux"
[2025-07-27 17:08:25] VERSION="7 (Core)"
[2025-07-27 17:08:25] ID="centos"
[2025-07-27 17:08:25] ID_LIKE="rhel fedora"
[2025-07-27 17:08:25] VERSION_ID="7"
[2025-07-27 17:08:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 17:08:25] ANSI_COLOR="0;31"
[2025-07-27 17:08:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 17:08:25] HOME_URL="https://www.centos.org/"
[2025-07-27 17:08:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 17:08:25] 
[2025-07-27 17:08:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 17:08:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 17:08:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 17:08:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 17:08:25] 
[2025-07-27 17:08:25] 2025-07-27 15:07:54,201 | INFO     | ***************************************
[2025-07-27 17:08:25] 2025-07-27 15:07:54,239 | WARNING  | process 1408564 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 17:08:25] 2025-07-27 15:07:54,274 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 17:08:25] 2025-07-27 15:07:54,320 | INFO     | number of running child processes to parent process 1408564: 1
[2025-07-27 17:08:25] 2025-07-27 15:07:54,320 | INFO     | maximum number of monitored processes: 6
[2025-07-27 17:08:25] 2025-07-27 15:07:54,320 | INFO     | aborting job monitoring since job object (job id=6745835129) has expired
[2025-07-27 17:08:25] 2025-07-27 15:07:54,704 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-27 17:08:25] 2025-07-27 15:07:54,714 | INFO     | sufficient remaining disk space (230100566016 B)
[2025-07-27 17:08:25] 2025-07-27 15:07:54,714 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 17:08:25] 2025-07-27 15:07:54,714 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 17:08:25] 2025-07-27 15:07:54,714 | INFO     | update_server=False
[2025-07-27 17:08:25] 2025-07-27 15:07:54,714 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 17:08:25] 2025-07-27 15:07:54,714 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 17:08:25] 2025-07-27 15:07:54,714 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 17:08:25] 2025-07-27 15:07:54,714 | INFO     | will abort loop
[2025-07-27 17:08:25] 2025-07-27 15:07:54,956 | INFO     | all data control threads have been joined
[2025-07-27 17:08:25] 2025-07-27 15:07:55,607 | INFO     | all payload control threads have been joined
[2025-07-27 17:08:25] 2025-07-27 15:07:55,638 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 17:08:25] 2025-07-27 15:07:55,715 | INFO     | [job] retrieve thread has finished
[2025-07-27 17:08:25] 2025-07-27 15:07:55,719 | INFO     | [job] queue monitor thread has finished
[2025-07-27 17:08:25] 2025-07-27 15:07:55,719 | INFO     | [job] job monitor thread has finished
[2025-07-27 17:08:25] 2025-07-27 15:07:55,750 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 17:08:25] 2025-07-27 15:07:55,956 | INFO     | [data] control thread has finished
[2025-07-27 17:08:25] 2025-07-27 15:07:56,042 | INFO     | job.realtimelogging is not enabled
[2025-07-27 17:08:25] 2025-07-27 15:07:56,162 | INFO     | all job control threads have been joined
[2025-07-27 17:08:25] 2025-07-27 15:07:56,163 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 17:08:25] 2025-07-27 15:07:56,333 | INFO     | [payload] failed_post thread has finished
[2025-07-27 17:08:25] 2025-07-27 15:07:56,394 | INFO     | [data] copytool_in thread has finished
[2025-07-27 17:08:25] 2025-07-27 15:07:56,612 | INFO     | [payload] control thread has finished
[2025-07-27 17:08:25] 2025-07-27 15:07:56,800 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 17:08:25] 2025-07-27 15:07:57,046 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 17:08:25] 2025-07-27 15:07:57,091 | INFO     | [job] validate thread has finished
[2025-07-27 17:08:25] 2025-07-27 15:07:57,110 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 17:08:25] 2025-07-27 15:07:57,166 | INFO     | [job] control thread has finished
[2025-07-27 17:08:25] 2025-07-27 15:07:57,228 | INFO     | [payload] validate_post thread has finished
[2025-07-27 17:08:25] 2025-07-27 15:07:57,644 | INFO     | [data] copytool_out thread has finished
[2025-07-27 17:08:25] 2025-07-27 15:08:00,166 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 17:08:25] 2025-07-27 15:08:01,219 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139794825250624)>', '<ExcThread(monitor, started 139794197767936)>']
[2025-07-27 17:08:25] 2025-07-27 15:08:06,238 | INFO     | all workflow threads have been joined
[2025-07-27 17:08:25] 2025-07-27 15:08:06,238 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 17:08:25] 2025-07-27 15:08:06,238 | INFO     | traces error code: 0
[2025-07-27 17:08:25] 2025-07-27 15:08:06,238 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 17:08:25] 2025-07-27 15:08:25,096 | INFO     | PID=1402071 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 17:08:25] 2025-07-27 15:08:25,096 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 17:08:25] 2025-07-27 15:08:25,096 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 17:08:25] 2025-07-27 15:08:25,096 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 17:08:25] 2025-07-27 15:08:25,096 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 17:08:25] 2025-07-27 15:08:25,096 | INFO     | [monitor] control thread has ended
[2025-07-27 17:08:25] 2025-07-27 15:08:25,144 [wrapper] ==== pilot stdout END ====
[2025-07-27 17:08:25] 2025-07-27 15:08:25,146 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 17:08:25] 2025-07-27 15:08:25,149 [wrapper] pilotpid: 1402071
[2025-07-27 17:08:25] 2025-07-27 15:08:25,151 [wrapper] Pilot exit status: 0
[2025-07-27 17:08:25] 2025-07-27 15:08:25,158 [wrapper] pandaids: 6745835129
[2025-07-27 17:08:25] 2025-07-27 15:08:25,175 [wrapper] cleanup supervisor_pilot 1421390 1402072
[2025-07-27 17:08:25] 2025-07-27 15:08:25,177 [wrapper] Test setup, not cleaning
[2025-07-27 17:08:25] 2025-07-27 15:08:25,180 [wrapper] apfmon messages muted
[2025-07-27 17:08:25] 2025-07-27 15:08:25,182 [wrapper] ==== wrapper stdout END ====
[2025-07-27 17:08:25] 2025-07-27 15:08:25,184 [wrapper] ==== wrapper stderr END ====
[2025-07-27 17:08:25]  *** Error codes and diagnostics ***
[2025-07-27 17:08:25]     "exeErrorCode": 0,
[2025-07-27 17:08:25]     "exeErrorDiag": "",
[2025-07-27 17:08:25]     "pilotErrorCode": 0,
[2025-07-27 17:08:25]     "pilotErrorDiag": "",
[2025-07-27 17:08:25]  *** Listing of results directory ***
[2025-07-27 17:08:25] total 346732
[2025-07-27 17:08:25] -rw-r--r-- 1 boinc boinc    530466 Jul 27 00:18 pilot3.tar.gz
[2025-07-27 17:08:25] -rwx------ 1 boinc boinc     36292 Jul 27 00:23 runpilot2-wrapper.sh
[2025-07-27 17:08:25] -rw-r--r-- 1 boinc boinc      5112 Jul 27 00:23 queuedata.json
[2025-07-27 17:08:25] -rw-r--r-- 1 boinc boinc       100 Jul 27 15:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 17:08:25] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 15:36 run_atlas
[2025-07-27 17:08:25] -rw-r--r-- 1 boinc boinc       105 Jul 27 15:36 job.xml
[2025-07-27 17:08:25] -rw-r--r-- 2 boinc boinc 145682593 Jul 27 15:36 EVNT.45743347._002531.pool.root.1
[2025-07-27 17:08:25] -rw-r--r-- 1 boinc boinc      6921 Jul 27 15:36 init_data.xml
[2025-07-27 17:08:25] drwxrwx--x 2 boinc boinc      4096 Jul 27 15:36 shared
[2025-07-27 17:08:25] -rw-r--r-- 2 boinc boinc    542883 Jul 27 15:36 input.tar.gz
[2025-07-27 17:08:25] -rw-r--r-- 2 boinc boinc     15095 Jul 27 15:36 start_atlas.sh
[2025-07-27 17:08:25] -rw-r--r-- 1 boinc boinc         0 Jul 27 15:36 boinc_lockfile
[2025-07-27 17:08:25] -rw-r--r-- 1 boinc boinc      2560 Jul 27 15:36 pandaJob.out
[2025-07-27 17:08:25] -rw------- 1 boinc boinc    980117 Jul 27 15:36 agis_schedconf.cvmfs.json
[2025-07-27 17:08:25] -rw------- 1 boinc boinc   1593052 Jul 27 15:36 agis_ddmendpoints.agis.ALL.json
[2025-07-27 17:08:25] drwx------ 4 boinc boinc      4096 Jul 27 15:36 pilot3
[2025-07-27 17:08:25] -rw------- 1 boinc boinc 203993254 Jul 27 17:07 HITS.45743349._045337.pool.root.1
[2025-07-27 17:08:25] -rw------- 1 boinc boinc        95 Jul 27 17:07 pilot_heartbeat.json
[2025-07-27 17:08:25] -rw-r--r-- 1 boinc boinc       529 Jul 27 17:07 boinc_task_state.xml
[2025-07-27 17:08:25] -rw------- 1 boinc boinc      1022 Jul 27 17:07 memory_monitor_summary.json
[2025-07-27 17:08:25] -rw------- 1 boinc boinc    217822 Jul 27 17:07 log.45743349._045337.job.log.tgz.1
[2025-07-27 17:08:25] -rw------- 1 boinc boinc      7763 Jul 27 17:07 heartbeat.json
[2025-07-27 17:08:25] -rw-r--r-- 1 boinc boinc        27 Jul 27 17:08 wrapper_checkpoint.txt
[2025-07-27 17:08:25] -rw-r--r-- 1 boinc boinc      8192 Jul 27 17:08 boinc_mmap_file
[2025-07-27 17:08:25] -rw------- 1 boinc boinc       747 Jul 27 17:08 pilotlog.txt
[2025-07-27 17:08:25] -rw------- 1 boinc boinc    531637 Jul 27 17:08 log.45743349._045337.job.log.1
[2025-07-27 17:08:25] -rw------- 1 boinc boinc       357 Jul 27 17:08 output.list
[2025-07-27 17:08:25] -rw-r--r-- 1 boinc boinc       620 Jul 27 17:08 runtime_log
[2025-07-27 17:08:25] -rw------- 1 boinc boinc    768000 Jul 27 17:08 result.tar.gz
[2025-07-27 17:08:25] -rw------- 1 boinc boinc       660 Jul 27 17:08 uynMDmGU2z7n9Rq4apOajLDm4fhM0noT9bVof3QYDm3W1KDmct5umm.diag
[2025-07-27 17:08:25] -rw-r--r-- 1 boinc boinc      8739 Jul 27 17:08 runtime_log.err
[2025-07-27 17:08:25] -rw-r--r-- 1 boinc boinc     21720 Jul 27 17:08 stderr.txt
[2025-07-27 17:08:25] HITS file was successfully produced:
[2025-07-27 17:08:25] -rw------- 1 boinc boinc 203993254 Jul 27 17:07 shared/HITS.pool.root.1
[2025-07-27 17:08:25]  *** Contents of shared directory: ***
[2025-07-27 17:08:25] total 342792
[2025-07-27 17:08:25] -rw-r--r-- 2 boinc boinc 145682593 Jul 27 15:36 ATLAS.root_0
[2025-07-27 17:08:25] -rw-r--r-- 2 boinc boinc    542883 Jul 27 15:36 input.tar.gz
[2025-07-27 17:08:25] -rw-r--r-- 2 boinc boinc     15095 Jul 27 15:36 start_atlas.sh
[2025-07-27 17:08:25] -rw------- 1 boinc boinc 203993254 Jul 27 17:07 HITS.pool.root.1
[2025-07-27 17:08:25] -rw------- 1 boinc boinc    768000 Jul 27 17:08 result.tar.gz
17:08:46 (1398426): run_atlas exited; CPU time 15826.524903
17:08:46 (1398426): called boinc_finish(0)

</stderr_txt>
]]>

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