Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:14:44 (3124610): wrapper (7.7.26015): starting
23:14:44 (3124610): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 23:14:45] Arguments: --nthreads 8
[2025-07-26 23:14:45] Threads: 8
[2025-07-26 23:14:45] Checking for CVMFS
[2025-07-26 23:14:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 23:14:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 23:14:45] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 23:14:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 23:14:46] 2.13.0.0 97728 26680 304464 148799 2 61 31225416 32935936 25604 16776704 2 248789706 99.592 303552079 18374 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 23:14:46] CVMFS is ok
[2025-07-26 23:14:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 23:14:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 23:14:46] Further information can be found at the LHC@home message board.
[2025-07-26 23:14:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 23:14:46] Checking for apptainer binary...
[2025-07-26 23:14:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 23:14:46] Running /usr/bin/apptainer --version
[2025-07-26 23:14:47] apptainer version 1.4.1-1.el9
[2025-07-26 23:14:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 23:14:47] c7-2-37.aglt2.org
[2025-07-26 23:14:47] apptainer works
[2025-07-26 23:14:47] Set ATHENA_PROC_NUMBER=8
[2025-07-26 23:14:47] Set ATHENA_CORE_NUMBER=8
[2025-07-26 23:14:48] Starting ATLAS job with PandaID=6745355603
[2025-07-26 23:14:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 01:13:08]  *** The last 200 lines of the pilot log: ***
[2025-07-27 01:13:08] 2025-07-27 05:12:33,846 | INFO     | sum of square deviations: 390583559.6666671
[2025-07-27 01:13:08] 2025-07-27 05:12:33,847 | INFO     | sum of deviations: 4383116345.500011
[2025-07-27 01:13:08] 2025-07-27 05:12:33,847 | INFO     | mean x: 1753589531.6111112
[2025-07-27 01:13:08] 2025-07-27 05:12:33,847 | INFO     | mean y: 2241456.4166666665
[2025-07-27 01:13:08] 2025-07-27 05:12:33,847 | INFO     | -- intersect: -19676484770.21186
[2025-07-27 01:13:08] 2025-07-27 05:12:33,847 | INFO     | intersect: -19676484770.21186
[2025-07-27 01:13:08] 2025-07-27 05:12:33,847 | INFO     | chi2: 3.296274688258724
[2025-07-27 01:13:08] 2025-07-27 05:12:33,847 | INFO     | current chi2=3.296274688258724 (change=0.23472747706466018 %)
[2025-07-27 01:13:08] 2025-07-27 05:12:33,847 | INFO     | right removable region: 107
[2025-07-27 01:13:08] 2025-07-27 05:12:33,848 | INFO     | sum of square deviations: 390576239.6666671
[2025-07-27 01:13:08] 2025-07-27 05:12:33,848 | INFO     | sum of deviations: -23763971697.77778
[2025-07-27 01:13:08] 2025-07-27 05:12:33,848 | INFO     | mean x: 1753589836.6111112
[2025-07-27 01:13:08] 2025-07-27 05:12:33,848 | INFO     | mean y: 2302285.314814815
[2025-07-27 01:13:08] 2025-07-27 05:12:33,848 | INFO     | -- intersect: 106696604228.26436
[2025-07-27 01:13:08] 2025-07-27 05:12:33,848 | INFO     | intersect: 106696604228.26436
[2025-07-27 01:13:08] 2025-07-27 05:12:33,849 | INFO     | chi2: 0.37111489642770357
[2025-07-27 01:13:08] 2025-07-27 05:12:33,849 | INFO     | current chi2=0.37111489642770357 (change=88.76781145961196 %)
[2025-07-27 01:13:08] 2025-07-27 05:12:33,849 | INFO     | sum of square deviations: 338794864.6019429
[2025-07-27 01:13:08] 2025-07-27 05:12:33,849 | INFO     | sum of deviations: -26916918959.116505
[2025-07-27 01:13:08] 2025-07-27 05:12:33,849 | INFO     | mean x: 1753589989.116505
[2025-07-27 01:13:08] 2025-07-27 05:12:33,849 | INFO     | mean y: 2311288.009708738
[2025-07-27 01:13:08] 2025-07-27 05:12:33,850 | INFO     | -- intersect: 139323312153.90143
[2025-07-27 01:13:08] 2025-07-27 05:12:33,850 | INFO     | intersect: 139323312153.90143
[2025-07-27 01:13:08] 2025-07-27 05:12:33,850 | INFO     | chi2: 0.1792767691279551
[2025-07-27 01:13:08] 2025-07-27 05:12:33,850 | INFO     | current chi2=0.1792767691279551 (change=51.69238129386709 %)
[2025-07-27 01:13:08] 2025-07-27 05:12:33,850 | INFO     | sum of square deviations: 291804277.0306116
[2025-07-27 01:13:08] 2025-07-27 05:12:33,850 | INFO     | sum of deviations: -25287350132.877556
[2025-07-27 01:13:08] 2025-07-27 05:12:33,850 | INFO     | mean x: 1753590141.622449
[2025-07-27 01:13:08] 2025-07-27 05:12:33,851 | INFO     | mean y: 2305965.4897959186
[2025-07-27 01:13:08] 2025-07-27 05:12:33,851 | INFO     | -- intersect: 151965972680.75647
[2025-07-27 01:13:08] 2025-07-27 05:12:33,852 | INFO     | intersect: 151965972680.75647
[2025-07-27 01:13:08] 2025-07-27 05:12:33,852 | INFO     | chi2: 0.16101839011459101
[2025-07-27 01:13:08] 2025-07-27 05:12:33,852 | INFO     | current chi2=0.16101839011459101 (change=10.18446455844624 %)
[2025-07-27 01:13:08] 2025-07-27 05:12:33,852 | INFO     | left removable region: 30
[2025-07-27 01:13:08] 2025-07-27 05:12:33,852 | INFO     | sum of square deviations: 141537819.94805166
[2025-07-27 01:13:08] 2025-07-27 05:12:33,852 | INFO     | sum of deviations: -13308724443.961042
[2025-07-27 01:13:08] 2025-07-27 05:12:33,852 | INFO     | mean x: 1753590416.116883
[2025-07-27 01:13:08] 2025-07-27 05:12:33,853 | INFO     | mean y: 2281342.662337662
[2025-07-27 01:13:08] 2025-07-27 05:12:33,853 | INFO     | -- intersect: 164891437076.7007
[2025-07-27 01:13:08] 2025-07-27 05:12:33,853 | INFO     | intersect: 164891437076.7007
[2025-07-27 01:13:08] 2025-07-27 05:12:33,853 | INFO     | chi2: 0.1301582878406671
[2025-07-27 01:13:08] 2025-07-27 05:12:33,853 | INFO     | -- intersect: 164891437076.7007
[2025-07-27 01:13:08] 2025-07-27 05:12:33,853 | INFO     | current memory leak: -94.03 B/s (using 77 data points, chi2=0.13)
[2025-07-27 01:13:08] 2025-07-27 05:12:33,853 | INFO     | could have reported an average CPU frequency of 3168 MHz (7 samples)
[2025-07-27 01:13:08] 2025-07-27 05:12:33,854 | INFO     | ..............................
[2025-07-27 01:13:08] 2025-07-27 05:12:33,854 | INFO     | . Timing measurements:
[2025-07-27 01:13:08] 2025-07-27 05:12:33,854 | INFO     | . get job = 0 s
[2025-07-27 01:13:08] 2025-07-27 05:12:33,854 | INFO     | . initial setup = 6 s
[2025-07-27 01:13:08] 2025-07-27 05:12:33,854 | INFO     | . payload setup = 46 s
[2025-07-27 01:13:08] 2025-07-27 05:12:33,854 | INFO     | . stage-in = 0 s
[2025-07-27 01:13:08] 2025-07-27 05:12:33,854 | INFO     | . payload execution = 6888 s
[2025-07-27 01:13:08] 2025-07-27 05:12:33,854 | INFO     | . stage-out = 1 s
[2025-07-27 01:13:08] 2025-07-27 05:12:33,854 | INFO     | . log creation = 0 s
[2025-07-27 01:13:08] 2025-07-27 05:12:33,854 | INFO     | ..............................
[2025-07-27 01:13:08] 2025-07-27 05:12:33,884 | INFO     | sufficient remaining disk space (75707187200 B)
[2025-07-27 01:13:08] 2025-07-27 05:12:33,885 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-27 01:13:08] 2025-07-27 05:12:33,886 | INFO     | size of work directory /tmp/boinchome/slots/1/PanDA_Pilot-6745355603: 3610947 B (within 2537553920 B limit)
[2025-07-27 01:13:08] 2025-07-27 05:12:33,886 | INFO     | pfn file=/tmp/boinchome/slots/1/PanDA_Pilot-6745355603/HITS.45743349._043286.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-27 01:13:08] 2025-07-27 05:12:33,886 | INFO     | total size of present files: 0 B (workdir size: 3610947 B)
[2025-07-27 01:13:08] 2025-07-27 05:12:33,886 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6745355603/HITS.45743349._043286.pool.root.1 since it does not exist
[2025-07-27 01:13:08] 2025-07-27 05:12:34,038 | INFO     | 
[2025-07-27 01:13:08] 2025-07-27 05:12:34,040 | INFO     | job summary report
[2025-07-27 01:13:08] 2025-07-27 05:12:34,040 | INFO     | --------------------------------------------------
[2025-07-27 01:13:08] 2025-07-27 05:12:34,040 | INFO     | PanDA job id: 6745355603
[2025-07-27 01:13:08] 2025-07-27 05:12:34,040 | INFO     | task id: 45743349
[2025-07-27 01:13:08] 2025-07-27 05:12:34,040 | INFO     | errors: (none)
[2025-07-27 01:13:08] 2025-07-27 05:12:34,041 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 01:13:08] 2025-07-27 05:12:34,041 | INFO     | pilot state: finished 
[2025-07-27 01:13:08] 2025-07-27 05:12:34,041 | INFO     | transexitcode: 0
[2025-07-27 01:13:08] 2025-07-27 05:12:34,041 | INFO     | exeerrorcode: 0
[2025-07-27 01:13:08] 2025-07-27 05:12:34,041 | INFO     | exeerrordiag: 
[2025-07-27 01:13:08] 2025-07-27 05:12:34,041 | INFO     | exitcode: 0
[2025-07-27 01:13:08] 2025-07-27 05:12:34,041 | INFO     | exitmsg: OK
[2025-07-27 01:13:08] 2025-07-27 05:12:34,041 | INFO     | cpuconsumptiontime: 35640 s
[2025-07-27 01:13:08] 2025-07-27 05:12:34,041 | INFO     | nevents: 400
[2025-07-27 01:13:08] 2025-07-27 05:12:34,041 | INFO     | neventsw: 0
[2025-07-27 01:13:08] 2025-07-27 05:12:34,041 | INFO     | pid: 3159169
[2025-07-27 01:13:08] 2025-07-27 05:12:34,041 | INFO     | pgrp: 3159169
[2025-07-27 01:13:08] 2025-07-27 05:12:34,042 | INFO     | corecount: 8
[2025-07-27 01:13:08] 2025-07-27 05:12:34,042 | INFO     | event service: False
[2025-07-27 01:13:08] 2025-07-27 05:12:34,042 | INFO     | sizes: {0: 2396647, 1: 2397332, 2: 2397531, 13: 2397531, 24: 2397587, 25: 2397877, 35: 2398033, 6938: 2425121, 6940: 2434119, 6943: 2434175, 6956: 2434397}
[2025-07-27 01:13:08] 2025-07-27 05:12:34,042 | INFO     | --------------------------------------------------
[2025-07-27 01:13:08] 2025-07-27 05:12:34,042 | INFO     | 
[2025-07-27 01:13:08] 2025-07-27 05:12:34,042 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-27 01:13:08] 2025-07-27 05:12:34,113 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 01:13:08] 2025-07-27 05:12:34,113 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 01:13:08] 2025-07-27 05:12:34,114 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 01:13:08] 2025-07-27 05:12:34,114 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 01:13:08] 2025-07-27 05:12:34,114 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 01:13:08] 2025-07-27 05:12:34,114 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 01:13:08] 2025-07-27 05:12:34,114 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 01:13:08] 2025-07-27 05:12:34,114 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 01:13:08] 2025-07-27 05:12:34,114 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 01:13:08] 2025-07-27 05:12:34,114 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 01:13:08] 2025-07-27 05:12:34,114 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 01:13:08] 2025-07-27 05:12:34,115 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 01:13:08] 2025-07-27 05:12:34,115 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 01:13:08] 2025-07-27 05:12:34,115 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 01:13:08] 2025-07-27 05:12:34,115 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 01:13:08] 2025-07-27 05:12:34,115 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 01:13:08] 2025-07-27 05:12:34,115 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 01:13:08] 2025-07-27 05:12:34,115 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 01:13:08] 2025-07-27 05:12:34,115 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 01:13:08] 2025-07-27 05:12:34,115 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 01:13:08] 2025-07-27 05:12:34,116 | INFO     | job 6745355603 has completed (purged errors)
[2025-07-27 01:13:08] 2025-07-27 05:12:34,116 | INFO     | overall cleanup function is called
[2025-07-27 01:13:08] 2025-07-27 05:12:34,672 | INFO     | number of running child processes to parent process 3159169: 1
[2025-07-27 01:13:08] 2025-07-27 05:12:34,672 | INFO     | maximum number of monitored processes: 6
[2025-07-27 01:13:08] 2025-07-27 05:12:34,672 | INFO     | aborting job monitoring since job object (job id=6745355603) has expired
[2025-07-27 01:13:08] 2025-07-27 05:12:35,124 | INFO     | --- collectZombieJob: --- 10, [3159169]
[2025-07-27 01:13:08] 2025-07-27 05:12:35,124 | INFO     | zombie collector waiting for pid 3159169
[2025-07-27 01:13:08] 2025-07-27 05:12:35,125 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 01:13:08] 2025-07-27 05:12:35,125 | INFO     | collected zombie processes
[2025-07-27 01:13:08] 2025-07-27 05:12:35,125 | INFO     | will attempt to kill all subprocesses of pid=3159169
[2025-07-27 01:13:08] 2025-07-27 05:12:36,142 | INFO     | process IDs to be killed: [3159169] (in reverse order)
[2025-07-27 01:13:08] 2025-07-27 05:12:36,338 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 01:13:08] 2025-07-27 05:12:36,339 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 01:13:08] 2025-07-27 05:12:36,368 | INFO     | did not find any defunct processes belonging to 3159169
[2025-07-27 01:13:08] 2025-07-27 05:12:36,408 | INFO     | did not find any defunct processes belonging to 3159169
[2025-07-27 01:13:08] 2025-07-27 05:12:36,408 | INFO     | ready for new job
[2025-07-27 01:13:08] 2025-07-27 05:12:36,408 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 01:13:08] 2025-07-27 05:12:36,411 | INFO     | ***************************************
[2025-07-27 01:13:08] 2025-07-27 05:12:36,411 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 01:13:08] 2025-07-27 05:12:36,411 | INFO     | ***************************************
[2025-07-27 01:13:08] 2025-07-27 05:12:36,411 | INFO     | 
[2025-07-27 01:13:08] 2025-07-27 05:12:36,474 | INFO     | architecture information:
[2025-07-27 01:13:08] 2025-07-27 05:12:36,498 | INFO     | executing command: cat /etc/os-release
[2025-07-27 01:13:08] 2025-07-27 05:12:36,570 | INFO     | cat /etc/os-release:
[2025-07-27 01:13:08] NAME="CentOS Linux"
[2025-07-27 01:13:08] VERSION="7 (Core)"
[2025-07-27 01:13:08] ID="centos"
[2025-07-27 01:13:08] ID_LIKE="rhel fedora"
[2025-07-27 01:13:08] VERSION_ID="7"
[2025-07-27 01:13:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 01:13:08] ANSI_COLOR="0;31"
[2025-07-27 01:13:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 01:13:08] HOME_URL="https://www.centos.org/"
[2025-07-27 01:13:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 01:13:08] 
[2025-07-27 01:13:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 01:13:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 01:13:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 01:13:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 01:13:08] 
[2025-07-27 01:13:08] 2025-07-27 05:12:36,570 | INFO     | ***************************************
[2025-07-27 01:13:08] 2025-07-27 05:12:37,074 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-27 01:13:08] 2025-07-27 05:12:37,100 | INFO     | sufficient remaining disk space (75711381504 B)
[2025-07-27 01:13:08] 2025-07-27 05:12:37,101 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 01:13:08] 2025-07-27 05:12:37,101 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 01:13:08] 2025-07-27 05:12:37,101 | INFO     | update_server=False
[2025-07-27 01:13:08] 2025-07-27 05:12:37,101 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 01:13:08] 2025-07-27 05:12:37,200 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 01:13:08] 2025-07-27 05:12:37,200 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 01:13:08] 2025-07-27 05:12:37,204 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 01:13:08] 2025-07-27 05:12:37,204 | INFO     | will abort loop
[2025-07-27 01:13:08] 2025-07-27 05:12:37,539 | INFO     | all data control threads have been joined
[2025-07-27 01:13:08] 2025-07-27 05:12:37,597 | INFO     | all payload control threads have been joined
[2025-07-27 01:13:08] 2025-07-27 05:12:38,107 | INFO     | [job] retrieve thread has finished
[2025-07-27 01:13:08] 2025-07-27 05:12:38,129 | INFO     | [payload] validate_post thread has finished
[2025-07-27 01:13:08] 2025-07-27 05:12:38,156 | INFO     | all job control threads have been joined
[2025-07-27 01:13:08] 2025-07-27 05:12:38,160 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 01:13:08] 2025-07-27 05:12:38,210 | INFO     | [job] job monitor thread has finished
[2025-07-27 01:13:08] 2025-07-27 05:12:38,395 | INFO     | [data] copytool_in thread has finished
[2025-07-27 01:13:08] 2025-07-27 05:12:38,403 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 01:13:08] 2025-07-27 05:12:38,526 | INFO     | [payload] failed_post thread has finished
[2025-07-27 01:13:08] 2025-07-27 05:12:38,534 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 01:13:08] 2025-07-27 05:12:38,545 | INFO     | [data] control thread has finished
[2025-07-27 01:13:08] 2025-07-27 05:12:38,603 | INFO     | [payload] control thread has finished
[2025-07-27 01:13:08] 2025-07-27 05:12:39,058 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 01:13:08] 2025-07-27 05:12:39,166 | INFO     | [job] control thread has finished
[2025-07-27 01:13:08] 2025-07-27 05:12:39,546 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 01:13:08] 2025-07-27 05:12:39,548 | INFO     | [job] validate thread has finished
[2025-07-27 01:13:08] 2025-07-27 05:12:40,066 | INFO     | [job] queue monitor thread has finished
[2025-07-27 01:13:08] 2025-07-27 05:12:40,409 | INFO     | [data] copytool_out thread has finished
[2025-07-27 01:13:08] 2025-07-27 05:12:40,605 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 01:13:08] 2025-07-27 05:12:44,619 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 01:13:08] 2025-07-27 05:12:47,974 | INFO     | job.realtimelogging is not enabled
[2025-07-27 01:13:08] 2025-07-27 05:12:48,980 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 01:13:08] 2025-07-27 05:12:50,726 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140349901887296)>', '<ExcThread(monitor, started 140349330683648)>']
[2025-07-27 01:13:08] 2025-07-27 05:12:55,752 | INFO     | all workflow threads have been joined
[2025-07-27 01:13:08] 2025-07-27 05:12:55,753 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 01:13:08] 2025-07-27 05:12:55,754 | INFO     | traces error code: 0
[2025-07-27 01:13:08] 2025-07-27 05:12:55,755 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 01:13:08] 2025-07-27 05:13:08,075 | INFO     | PID=3131890 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 01:13:08] 2025-07-27 05:13:08,075 | INFO     | .. there are 27 such processes running
[2025-07-27 01:13:08] 2025-07-27 05:13:08,076 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 01:13:08] 2025-07-27 05:13:08,076 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 01:13:08] 2025-07-27 05:13:08,076 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 01:13:08] 2025-07-27 05:13:08,076 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 01:13:08] 2025-07-27 05:13:08,077 | INFO     | [monitor] control thread has ended
[2025-07-27 01:13:08] 2025-07-27 05:13:08,387 [wrapper] ==== pilot stdout END ====
[2025-07-27 01:13:08] 2025-07-27 05:13:08,405 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 01:13:08] 2025-07-27 05:13:08,414 [wrapper] pilotpid: 3131890
[2025-07-27 01:13:08] 2025-07-27 05:13:08,421 [wrapper] Pilot exit status: 0
[2025-07-27 01:13:08] 2025-07-27 05:13:08,472 [wrapper] pandaids: 6745355603
[2025-07-27 01:13:08] 2025-07-27 05:13:08,689 [wrapper] cleanup supervisor_pilot 1751201 3131891
[2025-07-27 01:13:08] 2025-07-27 05:13:08,696 [wrapper] Test setup, not cleaning
[2025-07-27 01:13:08] 2025-07-27 05:13:08,720 [wrapper] apfmon messages muted
[2025-07-27 01:13:08] 2025-07-27 05:13:08,739 [wrapper] ==== wrapper stdout END ====
[2025-07-27 01:13:08] 2025-07-27 05:13:08,743 [wrapper] ==== wrapper stderr END ====
[2025-07-27 01:13:08]  *** Error codes and diagnostics ***
[2025-07-27 01:13:08]     "exeErrorCode": 0,
[2025-07-27 01:13:08]     "exeErrorDiag": "",
[2025-07-27 01:13:08]     "pilotErrorCode": 0,
[2025-07-27 01:13:08]     "pilotErrorDiag": "",
[2025-07-27 01:13:08]  *** Listing of results directory ***
[2025-07-27 01:13:08] total 347812
[2025-07-27 01:13:08] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 15:34 pilot3.tar.gz
[2025-07-27 01:13:08] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 15:37 queuedata.json
[2025-07-27 01:13:08] -rwx------. 1 boincer umatlas     36292 Jul 26 15:38 runpilot2-wrapper.sh
[2025-07-27 01:13:08] -rw-r--r--. 1 boincer umatlas       100 Jul 26 23:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 01:13:08] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 23:14 run_atlas
[2025-07-27 01:13:08] -rw-r--r--. 1 boincer umatlas       105 Jul 26 23:14 job.xml
[2025-07-27 01:13:08] -rw-r--r--. 2 boincer umatlas 144555245 Jul 26 23:14 EVNT.45743347._002471.pool.root.1
[2025-07-27 01:13:08] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 23:14 start_atlas.sh
[2025-07-27 01:13:08] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 23:14 shared
[2025-07-27 01:13:08] -rw-r--r--. 2 boincer umatlas    542898 Jul 26 23:14 input.tar.gz
[2025-07-27 01:13:08] -rw-r--r--. 1 boincer umatlas         0 Jul 26 23:14 boinc_lockfile
[2025-07-27 01:13:08] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 23:14 pandaJob.out
[2025-07-27 01:13:08] -rw-------. 1 boincer umatlas    980125 Jul 26 23:15 agis_schedconf.cvmfs.json
[2025-07-27 01:13:08] -rw-------. 1 boincer umatlas   1593052 Jul 26 23:15 agis_ddmendpoints.agis.ALL.json
[2025-07-27 01:13:08] drwx------. 4 boincer umatlas      4096 Jul 26 23:15 pilot3
[2025-07-27 01:13:08] -rw-------. 1 boincer umatlas 205882091 Jul 27 01:11 HITS.45743349._043286.pool.root.1
[2025-07-27 01:13:08] -rw-r--r--. 1 boincer umatlas       529 Jul 27 01:11 boinc_task_state.xml
[2025-07-27 01:13:08] -rw-------. 1 boincer umatlas      1034 Jul 27 01:12 memory_monitor_summary.json
[2025-07-27 01:13:08] -rw-------. 1 boincer umatlas    323296 Jul 27 01:12 log.45743349._043286.job.log.tgz.1
[2025-07-27 01:13:08] -rw-r--r--. 1 boincer umatlas      6932 Jul 27 01:12 init_data.xml
[2025-07-27 01:13:08] -rw-------. 1 boincer umatlas      7779 Jul 27 01:12 heartbeat.json
[2025-07-27 01:13:08] -rw-------. 1 boincer umatlas       823 Jul 27 01:13 pilotlog.txt
[2025-07-27 01:13:08] -rw-------. 1 boincer umatlas        95 Jul 27 01:13 pilot_heartbeat.json
[2025-07-27 01:13:08] -rw-r--r--. 1 boincer umatlas        27 Jul 27 01:13 wrapper_checkpoint.txt
[2025-07-27 01:13:08] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 01:13 boinc_mmap_file
[2025-07-27 01:13:08] -rw-------. 1 boincer umatlas    603697 Jul 27 01:13 log.45743349._043286.job.log.1
[2025-07-27 01:13:08] -rw-------. 1 boincer umatlas       357 Jul 27 01:13 output.list
[2025-07-27 01:13:08] -rw-r--r--. 1 boincer umatlas       620 Jul 27 01:13 runtime_log
[2025-07-27 01:13:08] -rw-------. 1 boincer umatlas    942080 Jul 27 01:13 result.tar.gz
[2025-07-27 01:13:08] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 01:13 runtime_log.err
[2025-07-27 01:13:08] -rw-------. 1 boincer umatlas       651 Jul 27 01:13 RRPMDmttzz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGxSLDmZDYKkn.diag
[2025-07-27 01:13:08] -rw-r--r--. 1 boincer umatlas     21527 Jul 27 01:13 stderr.txt
[2025-07-27 01:13:08] HITS file was successfully produced:
[2025-07-27 01:13:09] -rw-------. 1 boincer umatlas 205882091 Jul 27 01:11 shared/HITS.pool.root.1
[2025-07-27 01:13:09]  *** Contents of shared directory: ***
[2025-07-27 01:13:09] total 343700
[2025-07-27 01:13:09] -rw-r--r--. 2 boincer umatlas 144555245 Jul 26 23:14 ATLAS.root_0
[2025-07-27 01:13:09] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 23:14 start_atlas.sh
[2025-07-27 01:13:09] -rw-r--r--. 2 boincer umatlas    542898 Jul 26 23:14 input.tar.gz
[2025-07-27 01:13:09] -rw-------. 1 boincer umatlas 205882091 Jul 27 01:11 HITS.pool.root.1
[2025-07-27 01:13:09] -rw-------. 1 boincer umatlas    942080 Jul 27 01:13 result.tar.gz
01:13:10 (3124610): run_atlas exited; CPU time 35903.228919
01:13:10 (3124610): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN