Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:12:25 (1043): wrapper (7.7.26015): starting
23:12:25 (1043): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 23:12:25] Arguments: --nthreads 8
[2025-07-26 23:12:25] Threads: 8
[2025-07-26 23:12:25] Checking for CVMFS
[2025-07-26 23:12:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 23:12:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 23:12:25] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 23:12:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 23:12:25] 2.11.2.0 3213 516383 243316 148797 0 188 19943937 20275200 917 130560 0 179287590 99.988 22515399 19706 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 23:12:25] CVMFS is ok
[2025-07-26 23:12:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 23:12:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 23:12:25] Further information can be found at the LHC@home message board.
[2025-07-26 23:12:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 23:12:25] Checking for apptainer binary...
[2025-07-26 23:12:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 23:12:25] Running /usr/bin/apptainer --version
[2025-07-26 23:12:25] apptainer version 1.3.2-1.el7
[2025-07-26 23:12:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 23:12:26] c-205-38.aglt2.org
[2025-07-26 23:12:26] apptainer works
[2025-07-26 23:12:26] Set ATHENA_PROC_NUMBER=8
[2025-07-26 23:12:26] Set ATHENA_CORE_NUMBER=8
[2025-07-26 23:12:26] Starting ATLAS job with PandaID=6745821883
[2025-07-26 23:12:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 00:14:35]  *** The last 200 lines of the pilot log: ***
[2025-07-27 00:14:35]  lfn=log.45758316._000077.job.log.tgz.1
[2025-07-27 00:14:35]  mtime=0
[2025-07-27 00:14:35]  protocol_id=None
[2025-07-27 00:14:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 00:14:35]  replicas=None
[2025-07-27 00:14:35]  scope=mc23_13p6TeV
[2025-07-27 00:14:35]  status=None
[2025-07-27 00:14:35]  status_code=0
[2025-07-27 00:14:35]  storage_token=
[2025-07-27 00:14:35]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745821883/log.45758316._000077.job.log.tgz.1
[2025-07-27 00:14:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a2/04/log.45758316._000077.job.log.tgz.1
[2025-07-27 00:14:35]  workdir=None
[2025-07-27 00:14:35] ]
[2025-07-27 00:14:35] 2025-07-27 04:13:58,700 | INFO     | transferring file log.45758316._000077.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745821883/log.45758316._000077.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 00:14:35] 2025-07-27 04:13:58,701 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745821883/log.45758316._000077.job.log.tgz.1 /tmp/boinchome/slots/0/log.45758316._000077.job
[2025-07-27 00:14:35] 2025-07-27 04:13:58,717 | INFO     | adding to output.list: log.45758316._000077.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a2/04/log.45758316._000077.job.log.tg
[2025-07-27 00:14:35] 2025-07-27 04:13:58,718 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 00:14:35] 2025-07-27 04:13:58,718 | INFO     | summary of transferred files:
[2025-07-27 00:14:35] 2025-07-27 04:13:58,719 | INFO     |  -- lfn=log.45758316._000077.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 00:14:35] 2025-07-27 04:13:58,719 | INFO     | stage-out finished correctly
[2025-07-27 00:14:35] 2025-07-27 04:13:58,815 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 00:14:35] 2025-07-27 04:13:59,828 | WARNING  | process 11199 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 00:14:35] 2025-07-27 04:13:59,829 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745821883/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 00:14:35] 2025-07-27 04:13:59,891 | INFO     | number of running child processes to parent process 11199: 1
[2025-07-27 00:14:35] 2025-07-27 04:13:59,892 | INFO     | maximum number of monitored processes: 6
[2025-07-27 00:14:35] 2025-07-27 04:14:00,485 | INFO     | job 6745821883 has state=finished
[2025-07-27 00:14:35] 2025-07-27 04:14:00,485 | INFO     | preparing for final server update for job 6745821883 in state='finished'
[2025-07-27 00:14:35] 2025-07-27 04:14:00,486 | INFO     | this job has now completed (state=finished)
[2025-07-27 00:14:35] 2025-07-27 04:14:00,486 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 00:14:35] 2025-07-27 04:14:00,486 | INFO     | log transfer has been attempted: DONE
[2025-07-27 00:14:35] 2025-07-27 04:14:00,486 | INFO     | job 6745821883 has finished - writing final server update
[2025-07-27 00:14:35] 2025-07-27 04:14:00,486 | INFO     | total number of processed events: 400 (read)
[2025-07-27 00:14:35] 2025-07-27 04:14:00,487 | INFO     | executing command: lscpu
[2025-07-27 00:14:35] 2025-07-27 04:14:00,518 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 00:14:35] 2025-07-27 04:14:02,394 | INFO     | monitor loop #279: job 0:6745821883 is in state 'finished'
[2025-07-27 00:14:35] 2025-07-27 04:14:02,394 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 00:14:35] 2025-07-27 04:14:02,969 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 00:14:35] 2025-07-27 04:14:02,971 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2889.0011250000002
[2025-07-27 00:14:35] 2025-07-27 04:14:02,973 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745821883/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 00:14:35] 2025-07-27 04:14:02,974 | INFO     | extracted standard info from prmon json
[2025-07-27 00:14:35] 2025-07-27 04:14:02,974 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 00:14:35] 2025-07-27 04:14:02,974 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 00:14:35] 2025-07-27 04:14:02,974 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 00:14:35] 2025-07-27 04:14:02,974 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 00:14:35] 2025-07-27 04:14:02,976 | INFO     | fitting pss+swap vs Time
[2025-07-27 00:14:35] 2025-07-27 04:14:02,976 | INFO     | sum of square deviations: 48810217.5
[2025-07-27 00:14:35] 2025-07-27 04:14:02,976 | INFO     | sum of deviations: 670348520.0
[2025-07-27 00:14:35] 2025-07-27 04:14:02,976 | INFO     | mean x: 1753587895.5
[2025-07-27 00:14:35] 2025-07-27 04:14:02,976 | INFO     | mean y: 2536102.4814814813
[2025-07-27 00:14:35] 2025-07-27 04:14:02,976 | INFO     | -- intersect: -24080844604.40309
[2025-07-27 00:14:35] 2025-07-27 04:14:02,976 | INFO     | intersect: -24080844604.40309
[2025-07-27 00:14:35] 2025-07-27 04:14:02,977 | INFO     | chi2: 0.00076200714770174
[2025-07-27 00:14:35] 2025-07-27 04:14:02,977 | INFO     | -- intersect: -24080844604.40309
[2025-07-27 00:14:35] 2025-07-27 04:14:02,977 | INFO     | current memory leak: 13.73 B/s (using 54 data points, chi2=0.00)
[2025-07-27 00:14:35] 2025-07-27 04:14:02,977 | INFO     | could have reported an average CPU frequency of 2958 MHz (6 samples)
[2025-07-27 00:14:35] 2025-07-27 04:14:02,977 | INFO     | ..............................
[2025-07-27 00:14:35] 2025-07-27 04:14:02,977 | INFO     | . Timing measurements:
[2025-07-27 00:14:35] 2025-07-27 04:14:02,977 | INFO     | . get job = 0 s
[2025-07-27 00:14:35] 2025-07-27 04:14:02,977 | INFO     | . initial setup = 2 s
[2025-07-27 00:14:35] 2025-07-27 04:14:02,977 | INFO     | . payload setup = 4 s
[2025-07-27 00:14:35] 2025-07-27 04:14:02,977 | INFO     | . stage-in = 0 s
[2025-07-27 00:14:35] 2025-07-27 04:14:02,977 | INFO     | . payload execution = 3663 s
[2025-07-27 00:14:35] 2025-07-27 04:14:02,977 | INFO     | . stage-out = 0 s
[2025-07-27 00:14:35] 2025-07-27 04:14:02,978 | INFO     | . log creation = 0 s
[2025-07-27 00:14:35] 2025-07-27 04:14:02,978 | INFO     | ..............................
[2025-07-27 00:14:35] 2025-07-27 04:14:03,307 | INFO     | 
[2025-07-27 00:14:35] 2025-07-27 04:14:03,308 | INFO     | job summary report
[2025-07-27 00:14:35] 2025-07-27 04:14:03,308 | INFO     | --------------------------------------------------
[2025-07-27 00:14:35] 2025-07-27 04:14:03,308 | INFO     | PanDA job id: 6745821883
[2025-07-27 00:14:35] 2025-07-27 04:14:03,308 | INFO     | task id: 45758316
[2025-07-27 00:14:35] 2025-07-27 04:14:03,308 | INFO     | errors: (none)
[2025-07-27 00:14:35] 2025-07-27 04:14:03,308 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 00:14:35] 2025-07-27 04:14:03,309 | INFO     | pilot state: finished 
[2025-07-27 00:14:35] 2025-07-27 04:14:03,309 | INFO     | transexitcode: 0
[2025-07-27 00:14:35] 2025-07-27 04:14:03,309 | INFO     | exeerrorcode: 0
[2025-07-27 00:14:35] 2025-07-27 04:14:03,309 | INFO     | exeerrordiag: 
[2025-07-27 00:14:35] 2025-07-27 04:14:03,309 | INFO     | exitcode: 0
[2025-07-27 00:14:35] 2025-07-27 04:14:03,309 | INFO     | exitmsg: OK
[2025-07-27 00:14:35] 2025-07-27 04:14:03,309 | INFO     | cpuconsumptiontime: 27537 s
[2025-07-27 00:14:35] 2025-07-27 04:14:03,309 | INFO     | nevents: 400
[2025-07-27 00:14:35] 2025-07-27 04:14:03,309 | INFO     | neventsw: 0
[2025-07-27 00:14:35] 2025-07-27 04:14:03,310 | INFO     | pid: 11199
[2025-07-27 00:14:35] 2025-07-27 04:14:03,310 | INFO     | pgrp: 11199
[2025-07-27 00:14:35] 2025-07-27 04:14:03,310 | INFO     | corecount: 8
[2025-07-27 00:14:35] 2025-07-27 04:14:03,310 | INFO     | event service: False
[2025-07-27 00:14:35] 2025-07-27 04:14:03,310 | INFO     | sizes: {0: 2397474, 3: 2397736, 11: 2397764, 3672: 2432593, 3677: 2432731}
[2025-07-27 00:14:35] 2025-07-27 04:14:03,310 | INFO     | --------------------------------------------------
[2025-07-27 00:14:35] 2025-07-27 04:14:03,310 | INFO     | 
[2025-07-27 00:14:35] 2025-07-27 04:14:03,310 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 00:14:35] 2025-07-27 04:14:03,331 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 00:14:35] 2025-07-27 04:14:03,331 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 00:14:35] 2025-07-27 04:14:03,332 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 00:14:35] 2025-07-27 04:14:03,332 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 00:14:35] 2025-07-27 04:14:03,332 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 00:14:35] 2025-07-27 04:14:03,332 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 00:14:35] 2025-07-27 04:14:03,332 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 00:14:35] 2025-07-27 04:14:03,332 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 00:14:35] 2025-07-27 04:14:03,332 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 00:14:35] 2025-07-27 04:14:03,332 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 00:14:35] 2025-07-27 04:14:03,333 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 00:14:35] 2025-07-27 04:14:03,333 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 00:14:35] 2025-07-27 04:14:03,333 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 00:14:35] 2025-07-27 04:14:03,333 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 00:14:35] 2025-07-27 04:14:03,333 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 00:14:35] 2025-07-27 04:14:03,333 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 00:14:35] 2025-07-27 04:14:03,333 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 00:14:35] 2025-07-27 04:14:03,333 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 00:14:35] 2025-07-27 04:14:03,333 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 00:14:35] 2025-07-27 04:14:03,334 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 00:14:35] 2025-07-27 04:14:03,334 | INFO     | job 6745821883 has completed (purged errors)
[2025-07-27 00:14:35] 2025-07-27 04:14:03,334 | INFO     | overall cleanup function is called
[2025-07-27 00:14:35] 2025-07-27 04:14:04,342 | INFO     | --- collectZombieJob: --- 10, [11199]
[2025-07-27 00:14:35] 2025-07-27 04:14:04,342 | INFO     | zombie collector waiting for pid 11199
[2025-07-27 00:14:35] 2025-07-27 04:14:04,342 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 00:14:35] 2025-07-27 04:14:04,342 | INFO     | collected zombie processes
[2025-07-27 00:14:35] 2025-07-27 04:14:04,343 | INFO     | will attempt to kill all subprocesses of pid=11199
[2025-07-27 00:14:35] 2025-07-27 04:14:04,443 | INFO     | process IDs to be killed: [11199] (in reverse order)
[2025-07-27 00:14:35] 2025-07-27 04:14:04,487 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 00:14:35] 2025-07-27 04:14:04,487 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 00:14:35] 2025-07-27 04:14:04,489 | INFO     | did not find any defunct processes belonging to 11199
[2025-07-27 00:14:35] 2025-07-27 04:14:04,491 | INFO     | did not find any defunct processes belonging to 11199
[2025-07-27 00:14:35] 2025-07-27 04:14:04,492 | INFO     | ready for new job
[2025-07-27 00:14:35] 2025-07-27 04:14:04,492 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 00:14:35] 2025-07-27 04:14:04,493 | INFO     | ***************************************
[2025-07-27 00:14:35] 2025-07-27 04:14:04,494 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 00:14:35] 2025-07-27 04:14:04,494 | INFO     | ***************************************
[2025-07-27 00:14:35] 2025-07-27 04:14:04,494 | INFO     | 
[2025-07-27 00:14:35] 2025-07-27 04:14:04,495 | INFO     | architecture information:
[2025-07-27 00:14:35] 2025-07-27 04:14:04,495 | INFO     | executing command: cat /etc/os-release
[2025-07-27 00:14:35] 2025-07-27 04:14:04,509 | INFO     | cat /etc/os-release:
[2025-07-27 00:14:35] NAME="CentOS Linux"
[2025-07-27 00:14:35] VERSION="7 (Core)"
[2025-07-27 00:14:35] ID="centos"
[2025-07-27 00:14:35] ID_LIKE="rhel fedora"
[2025-07-27 00:14:35] VERSION_ID="7"
[2025-07-27 00:14:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 00:14:35] ANSI_COLOR="0;31"
[2025-07-27 00:14:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 00:14:35] HOME_URL="https://www.centos.org/"
[2025-07-27 00:14:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 00:14:35] 
[2025-07-27 00:14:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 00:14:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 00:14:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 00:14:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 00:14:35] 
[2025-07-27 00:14:35] 2025-07-27 04:14:04,509 | INFO     | ***************************************
[2025-07-27 00:14:35] 2025-07-27 04:14:05,012 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 00:14:35] 2025-07-27 04:14:05,030 | INFO     | sufficient remaining disk space (32648462336 B)
[2025-07-27 00:14:35] 2025-07-27 04:14:05,030 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 00:14:35] 2025-07-27 04:14:05,031 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 00:14:35] 2025-07-27 04:14:05,031 | INFO     | update_server=False
[2025-07-27 00:14:35] 2025-07-27 04:14:05,031 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 00:14:35] 2025-07-27 04:14:05,031 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 00:14:35] 2025-07-27 04:14:05,031 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 00:14:35] 2025-07-27 04:14:05,032 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 00:14:35] 2025-07-27 04:14:05,484 | INFO     | all job control threads have been joined
[2025-07-27 00:14:35] 2025-07-27 04:14:05,903 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 00:14:35] 2025-07-27 04:14:05,903 | INFO     | aborting loop
[2025-07-27 00:14:35] 2025-07-27 04:14:06,033 | INFO     | [job] retrieve thread has finished
[2025-07-27 00:14:35] 2025-07-27 04:14:06,036 | INFO     | [job] queue monitor thread has finished
[2025-07-27 00:14:35] 2025-07-27 04:14:06,107 | INFO     | [payload] failed_post thread has finished
[2025-07-27 00:14:35] 2025-07-27 04:14:06,108 | INFO     | all data control threads have been joined
[2025-07-27 00:14:35] 2025-07-27 04:14:06,231 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 00:14:35] 2025-07-27 04:14:06,242 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 00:14:35] 2025-07-27 04:14:06,336 | INFO     | all payload control threads have been joined
[2025-07-27 00:14:35] 2025-07-27 04:14:06,484 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 00:14:35] 2025-07-27 04:14:06,489 | INFO     | [job] control thread has finished
[2025-07-27 00:14:35] 2025-07-27 04:14:06,908 | INFO     | [job] job monitor thread has finished
[2025-07-27 00:14:35] 2025-07-27 04:14:07,033 | INFO     | [data] copytool_out thread has finished
[2025-07-27 00:14:35] 2025-07-27 04:14:07,069 | INFO     | [payload] validate_post thread has finished
[2025-07-27 00:14:35] 2025-07-27 04:14:07,113 | INFO     | [data] control thread has finished
[2025-07-27 00:14:35] 2025-07-27 04:14:07,324 | INFO     | [data] copytool_in thread has finished
[2025-07-27 00:14:35] 2025-07-27 04:14:07,325 | INFO     | [job] validate thread has finished
[2025-07-27 00:14:35] 2025-07-27 04:14:07,339 | INFO     | [payload] control thread has finished
[2025-07-27 00:14:35] 2025-07-27 04:14:09,038 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 00:14:35] 2025-07-27 04:14:15,825 | INFO     | job.realtimelogging is not enabled
[2025-07-27 00:14:35] 2025-07-27 04:14:16,829 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 00:14:35] 2025-07-27 04:14:18,482 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140503273412416)>', '<ExcThread(monitor, started 140502825408256)>']
[2025-07-27 00:14:35] 2025-07-27 04:14:23,504 | INFO     | all workflow threads have been joined
[2025-07-27 00:14:35] 2025-07-27 04:14:23,504 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 00:14:35] 2025-07-27 04:14:23,505 | INFO     | traces error code: 0
[2025-07-27 00:14:35] 2025-07-27 04:14:23,505 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 00:14:35] 2025-07-27 04:14:34,970 | INFO     | PID=4778 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-27 00:14:35] 2025-07-27 04:14:34,970 | INFO     | .. there are 2 such processes running
[2025-07-27 00:14:35] 2025-07-27 04:14:34,971 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 00:14:35] 2025-07-27 04:14:34,971 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 00:14:35] 2025-07-27 04:14:34,971 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 00:14:35] 2025-07-27 04:14:34,971 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 00:14:35] 2025-07-27 04:14:34,971 | INFO     | [monitor] control thread has ended
[2025-07-27 00:14:35] 2025-07-27 04:14:35,065 [wrapper] ==== pilot stdout END ====
[2025-07-27 00:14:35] 2025-07-27 04:14:35,068 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 00:14:35] 2025-07-27 04:14:35,071 [wrapper] pilotpid: 4778
[2025-07-27 00:14:35] 2025-07-27 04:14:35,073 [wrapper] Pilot exit status: 0
[2025-07-27 00:14:35] 2025-07-27 04:14:35,083 [wrapper] pandaids: 6745821883
[2025-07-27 00:14:35] 2025-07-27 04:14:35,116 [wrapper] cleanup supervisor_pilot 23047 4779
[2025-07-27 00:14:35] 2025-07-27 04:14:35,119 [wrapper] Test setup, not cleaning
[2025-07-27 00:14:35] 2025-07-27 04:14:35,122 [wrapper] apfmon messages muted
[2025-07-27 00:14:35] 2025-07-27 04:14:35,125 [wrapper] ==== wrapper stdout END ====
[2025-07-27 00:14:35] 2025-07-27 04:14:35,128 [wrapper] ==== wrapper stderr END ====
[2025-07-27 00:14:35]  *** Error codes and diagnostics ***
[2025-07-27 00:14:35]     "exeErrorCode": 0,
[2025-07-27 00:14:35]     "exeErrorDiag": "",
[2025-07-27 00:14:35]     "pilotErrorCode": 0,
[2025-07-27 00:14:35]     "pilotErrorDiag": "",
[2025-07-27 00:14:35]  *** Listing of results directory ***
[2025-07-27 00:14:35] total 415924
[2025-07-27 00:14:35] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 17:42 pilot3.tar.gz
[2025-07-27 00:14:35] -rwx------ 1 boincer umatlas     36292 Jul 26 18:03 runpilot2-wrapper.sh
[2025-07-27 00:14:35] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 18:03 queuedata.json
[2025-07-27 00:14:35] -rw-r--r-- 1 boincer umatlas       100 Jul 26 23:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 00:14:35] -rwxr-xr-x 1 boincer umatlas      7986 Jul 26 23:12 run_atlas
[2025-07-27 00:14:35] -rw-r--r-- 1 boincer umatlas       105 Jul 26 23:12 job.xml
[2025-07-27 00:14:35] -rw-r--r-- 2 boincer umatlas 243860166 Jul 26 23:12 EVNT.45758314._000004.pool.root.1
[2025-07-27 00:14:35] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 23:12 start_atlas.sh
[2025-07-27 00:14:35] drwxrwx--x 2 boincer umatlas      4096 Jul 26 23:12 shared
[2025-07-27 00:14:35] -rw-r--r-- 2 boincer umatlas    542883 Jul 26 23:12 input.tar.gz
[2025-07-27 00:14:35] -rw-r--r-- 1 boincer umatlas         0 Jul 26 23:12 boinc_lockfile
[2025-07-27 00:14:35] -rw-r--r-- 1 boincer umatlas      2568 Jul 26 23:12 pandaJob.out
[2025-07-27 00:14:35] -rw------- 1 boincer umatlas    980117 Jul 26 23:12 agis_schedconf.cvmfs.json
[2025-07-27 00:14:35] -rw------- 1 boincer umatlas   1593052 Jul 26 23:12 agis_ddmendpoints.agis.ALL.json
[2025-07-27 00:14:35] drwx------ 4 boincer umatlas      4096 Jul 26 23:12 pilot3
[2025-07-27 00:14:35] -rw-r--r-- 1 boincer umatlas      6050 Jul 27 00:09 init_data.xml
[2025-07-27 00:14:35] -rw------- 1 boincer umatlas 176837134 Jul 27 00:13 HITS.45758316._000077.pool.root.1
[2025-07-27 00:14:35] -rw-r--r-- 1 boincer umatlas       529 Jul 27 00:13 boinc_task_state.xml
[2025-07-27 00:14:35] -rw------- 1 boincer umatlas      1045 Jul 27 00:13 memory_monitor_summary.json
[2025-07-27 00:14:35] -rw------- 1 boincer umatlas    283083 Jul 27 00:13 log.45758316._000077.job.log.tgz.1
[2025-07-27 00:14:35] -rw------- 1 boincer umatlas      7827 Jul 27 00:14 heartbeat.json
[2025-07-27 00:14:35] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 00:14 boinc_mmap_file
[2025-07-27 00:14:35] -rw-r--r-- 1 boincer umatlas        27 Jul 27 00:14 wrapper_checkpoint.txt
[2025-07-27 00:14:35] -rw------- 1 boincer umatlas        95 Jul 27 00:14 pilot_heartbeat.json
[2025-07-27 00:14:35] -rw------- 1 boincer umatlas       819 Jul 27 00:14 pilotlog.txt
[2025-07-27 00:14:35] -rw------- 1 boincer umatlas    379789 Jul 27 00:14 log.45758316._000077.job.log.1
[2025-07-27 00:14:35] -rw------- 1 boincer umatlas       357 Jul 27 00:14 output.list
[2025-07-27 00:14:35] -rw-r--r-- 1 boincer umatlas       620 Jul 27 00:14 runtime_log
[2025-07-27 00:14:35] -rw------- 1 boincer umatlas    686080 Jul 27 00:14 result.tar.gz
[2025-07-27 00:14:35] -rw-r--r-- 1 boincer umatlas      8660 Jul 27 00:14 runtime_log.err
[2025-07-27 00:14:35] -rw------- 1 boincer umatlas       656 Jul 27 00:14 lpTMDmNA2z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNITLDmITrZ3m.diag
[2025-07-27 00:14:35] -rw-r--r-- 1 boincer umatlas     21587 Jul 27 00:14 stderr.txt
[2025-07-27 00:14:35] HITS file was successfully produced:
[2025-07-27 00:14:35] -rw------- 1 boincer umatlas 176837134 Jul 27 00:13 shared/HITS.pool.root.1
[2025-07-27 00:14:35]  *** Contents of shared directory: ***
[2025-07-27 00:14:35] total 412068
[2025-07-27 00:14:35] -rw-r--r-- 2 boincer umatlas 243860166 Jul 26 23:12 ATLAS.root_0
[2025-07-27 00:14:35] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 23:12 start_atlas.sh
[2025-07-27 00:14:35] -rw-r--r-- 2 boincer umatlas    542883 Jul 26 23:12 input.tar.gz
[2025-07-27 00:14:35] -rw------- 1 boincer umatlas 176837134 Jul 27 00:13 HITS.pool.root.1
[2025-07-27 00:14:35] -rw------- 1 boincer umatlas    686080 Jul 27 00:14 result.tar.gz
00:14:36 (1043): run_atlas exited; CPU time 27520.232987
00:14:36 (1043): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN