Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:12:37 (2655885): wrapper (7.7.26015): starting
23:12:37 (2655885): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 23:12:37] Arguments: --nthreads 8
[2025-07-26 23:12:37] Threads: 8
[2025-07-26 23:12:37] Checking for CVMFS
[2025-07-26 23:12:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 23:12:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 23:12:38] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 23:12:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 23:12:39] 2.12.6.0 1539006 17807 344536 148797 1 370 32423999 32935936 20607 16776704 1 54141768 99.713 80566222 20104 http://cvmfs-s1.hpc.swin.edu.au:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 23:12:39] CVMFS is ok
[2025-07-26 23:12:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 23:12:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 23:12:39] Further information can be found at the LHC@home message board.
[2025-07-26 23:12:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 23:12:39] Checking for apptainer binary...
[2025-07-26 23:12:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 23:12:39] Running /usr/bin/apptainer --version
[2025-07-26 23:12:40] apptainer version 1.4.1-1.el9
[2025-07-26 23:12:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 23:12:40] c6-12-29-4.aglt2.org
[2025-07-26 23:12:40] apptainer works
[2025-07-26 23:12:40] Set ATHENA_PROC_NUMBER=8
[2025-07-26 23:12:40] Set ATHENA_CORE_NUMBER=8
[2025-07-26 23:12:40] Starting ATLAS job with PandaID=6745821866
[2025-07-26 23:12:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 02:13:58]  *** The last 200 lines of the pilot log: ***
[2025-07-27 02:13:58] 2025-07-27 06:13:23,579 | INFO     | PID=2659842 has CPU usage=12.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 02:13:58] 2025-07-27 06:13:23,579 | INFO     | .. there are 17 such processes running
[2025-07-27 02:13:58] 2025-07-27 06:13:25,549 [wrapper] supervise_pilot (15 min periods counter: 13)
[2025-07-27 02:13:58] 2025-07-27 06:13:25,841 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 02:13:58] 2025-07-27 06:13:25,856 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2543.594812500001
[2025-07-27 02:13:58] 2025-07-27 06:13:25,888 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6745821866/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 02:13:58] 2025-07-27 06:13:25,889 | INFO     | extracted standard info from prmon json
[2025-07-27 02:13:58] 2025-07-27 06:13:25,889 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 02:13:58] 2025-07-27 06:13:25,890 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 02:13:58] 2025-07-27 06:13:25,890 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 02:13:58] 2025-07-27 06:13:25,890 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 02:13:58] 2025-07-27 06:13:25,894 | INFO     | fitting pss+swap vs Time
[2025-07-27 02:13:58] 2025-07-27 06:13:25,895 | INFO     | sum of square deviations: 1661737020.3085723
[2025-07-27 02:13:58] 2025-07-27 06:13:25,896 | INFO     | sum of deviations: -20688731653.262867
[2025-07-27 02:13:58] 2025-07-27 06:13:25,897 | INFO     | mean x: 1753591454.2228572
[2025-07-27 02:13:58] 2025-07-27 06:13:25,897 | INFO     | mean y: 2218574.3657142855
[2025-07-27 02:13:58] 2025-07-27 06:13:25,897 | INFO     | -- intersect: 21834543775.338154
[2025-07-27 02:13:58] 2025-07-27 06:13:25,897 | INFO     | intersect: 21834543775.338154
[2025-07-27 02:13:58] 2025-07-27 06:13:25,897 | INFO     | chi2: 3.2099583779855445
[2025-07-27 02:13:58] 2025-07-27 06:13:25,898 | INFO     | sum of square deviations: 1523337017.5529432
[2025-07-27 02:13:58] 2025-07-27 06:13:25,899 | INFO     | sum of deviations: -9444692395.564695
[2025-07-27 02:13:58] 2025-07-27 06:13:25,899 | INFO     | mean x: 1753591301.7294118
[2025-07-27 02:13:58] 2025-07-27 06:13:25,899 | INFO     | mean y: 2230715.0529411766
[2025-07-27 02:13:58] 2025-07-27 06:13:25,899 | INFO     | -- intersect: 10874500108.845545
[2025-07-27 02:13:58] 2025-07-27 06:13:25,899 | INFO     | intersect: 10874500108.845545
[2025-07-27 02:13:58] 2025-07-27 06:13:25,900 | INFO     | chi2: 2.534068439966397
[2025-07-27 02:13:58] 2025-07-27 06:13:25,900 | INFO     | current chi2=2.534068439966397 (change=21.056034329121484 %)
[2025-07-27 02:13:58] 2025-07-27 06:13:25,900 | INFO     | right removable region: 169
[2025-07-27 02:13:58] 2025-07-27 06:13:25,900 | INFO     | sum of square deviations: 1523313227.5529432
[2025-07-27 02:13:58] 2025-07-27 06:13:25,901 | INFO     | sum of deviations: -53489897755.49411
[2025-07-27 02:13:58] 2025-07-27 06:13:25,901 | INFO     | mean x: 1753591606.7294118
[2025-07-27 02:13:58] 2025-07-27 06:13:25,901 | INFO     | mean y: 2254431.3588235294
[2025-07-27 02:13:58] 2025-07-27 06:13:25,902 | INFO     | -- intersect: 61578189079.76248
[2025-07-27 02:13:58] 2025-07-27 06:13:25,902 | INFO     | intersect: 61578189079.76248
[2025-07-27 02:13:58] 2025-07-27 06:13:25,902 | INFO     | chi2: 1.0732647802745567
[2025-07-27 02:13:58] 2025-07-27 06:13:25,902 | INFO     | current chi2=1.0732647802745567 (change=66.5645265796842 %)
[2025-07-27 02:13:58] 2025-07-27 06:13:25,902 | INFO     | sum of square deviations: 1392807051.2484922
[2025-07-27 02:13:58] 2025-07-27 06:13:25,903 | INFO     | sum of deviations: -56415359358.23633
[2025-07-27 02:13:58] 2025-07-27 06:13:25,904 | INFO     | mean x: 1753591759.230303
[2025-07-27 02:13:58] 2025-07-27 06:13:25,904 | INFO     | mean y: 2257743.9272727272
[2025-07-27 02:13:58] 2025-07-27 06:13:25,904 | INFO     | -- intersect: 71031126513.61105
[2025-07-27 02:13:58] 2025-07-27 06:13:25,904 | INFO     | intersect: 71031126513.61105
[2025-07-27 02:13:58] 2025-07-27 06:13:25,904 | INFO     | chi2: 0.9616826519834228
[2025-07-27 02:13:58] 2025-07-27 06:13:25,904 | INFO     | current chi2=0.9616826519834228 (change=10.396514480107095 %)
[2025-07-27 02:13:58] 2025-07-27 06:13:25,904 | INFO     | left removable region: 20
[2025-07-27 02:13:58] 2025-07-27 06:13:25,905 | INFO     | sum of square deviations: 1025638410.7785257
[2025-07-27 02:13:58] 2025-07-27 06:13:25,905 | INFO     | sum of deviations: -34280287866.825516
[2025-07-27 02:13:58] 2025-07-27 06:13:25,906 | INFO     | mean x: 1753591881.2348993
[2025-07-27 02:13:58] 2025-07-27 06:13:25,906 | INFO     | mean y: 2259838.966442953
[2025-07-27 02:13:58] 2025-07-27 06:13:25,906 | INFO     | -- intersect: 58613202894.45354
[2025-07-27 02:13:58] 2025-07-27 06:13:25,906 | INFO     | intersect: 58613202894.45354
[2025-07-27 02:13:58] 2025-07-27 06:13:25,906 | INFO     | chi2: 0.23526292839067373
[2025-07-27 02:13:58] 2025-07-27 06:13:25,906 | INFO     | -- intersect: 58613202894.45354
[2025-07-27 02:13:58] 2025-07-27 06:13:25,907 | INFO     | current memory leak: -33.42 B/s (using 149 data points, chi2=0.24)
[2025-07-27 02:13:58] 2025-07-27 06:13:25,907 | INFO     | could have reported an average CPU frequency of 2459 MHz (9 samples)
[2025-07-27 02:13:58] 2025-07-27 06:13:25,908 | INFO     | ..............................
[2025-07-27 02:13:58] 2025-07-27 06:13:25,908 | INFO     | . Timing measurements:
[2025-07-27 02:13:58] 2025-07-27 06:13:25,908 | INFO     | . get job = 0 s
[2025-07-27 02:13:58] 2025-07-27 06:13:25,908 | INFO     | . initial setup = 5 s
[2025-07-27 02:13:58] 2025-07-27 06:13:25,908 | INFO     | . payload setup = 46 s
[2025-07-27 02:13:58] 2025-07-27 06:13:25,908 | INFO     | . stage-in = 0 s
[2025-07-27 02:13:58] 2025-07-27 06:13:25,908 | INFO     | . payload execution = 10668 s
[2025-07-27 02:13:58] 2025-07-27 06:13:25,908 | INFO     | . stage-out = 0 s
[2025-07-27 02:13:58] 2025-07-27 06:13:25,908 | INFO     | . log creation = 0 s
[2025-07-27 02:13:58] 2025-07-27 06:13:25,909 | INFO     | ..............................
[2025-07-27 02:13:58] 2025-07-27 06:13:26,328 | INFO     | 
[2025-07-27 02:13:58] 2025-07-27 06:13:26,328 | INFO     | job summary report
[2025-07-27 02:13:58] 2025-07-27 06:13:26,328 | INFO     | --------------------------------------------------
[2025-07-27 02:13:58] 2025-07-27 06:13:26,328 | INFO     | PanDA job id: 6745821866
[2025-07-27 02:13:58] 2025-07-27 06:13:26,328 | INFO     | task id: 45758316
[2025-07-27 02:13:58] 2025-07-27 06:13:26,328 | INFO     | errors: (none)
[2025-07-27 02:13:58] 2025-07-27 06:13:26,329 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 02:13:58] 2025-07-27 06:13:26,329 | INFO     | pilot state: finished 
[2025-07-27 02:13:58] 2025-07-27 06:13:26,329 | INFO     | transexitcode: 0
[2025-07-27 02:13:58] 2025-07-27 06:13:26,329 | INFO     | exeerrorcode: 0
[2025-07-27 02:13:58] 2025-07-27 06:13:26,329 | INFO     | exeerrordiag: 
[2025-07-27 02:13:58] 2025-07-27 06:13:26,329 | INFO     | exitcode: 0
[2025-07-27 02:13:58] 2025-07-27 06:13:26,329 | INFO     | exitmsg: OK
[2025-07-27 02:13:58] 2025-07-27 06:13:26,329 | INFO     | cpuconsumptiontime: 58606 s
[2025-07-27 02:13:58] 2025-07-27 06:13:26,329 | INFO     | nevents: 400
[2025-07-27 02:13:58] 2025-07-27 06:13:26,329 | INFO     | neventsw: 0
[2025-07-27 02:13:58] 2025-07-27 06:13:26,329 | INFO     | pid: 2668566
[2025-07-27 02:13:58] 2025-07-27 06:13:26,329 | INFO     | pgrp: 2668566
[2025-07-27 02:13:58] 2025-07-27 06:13:26,330 | INFO     | corecount: 8
[2025-07-27 02:13:58] 2025-07-27 06:13:26,330 | INFO     | event service: False
[2025-07-27 02:13:58] 2025-07-27 06:13:26,330 | INFO     | sizes: {0: 2397198, 1: 2397254, 2: 2397310, 3: 2397509, 14: 2397509, 25: 2397537, 30: 2397955, 36: 2397983, 10718: 2426871, 10720: 2435869, 10721: 2435925, 10730: 
[2025-07-27 02:13:58] 2025-07-27 06:13:26,330 | INFO     | --------------------------------------------------
[2025-07-27 02:13:58] 2025-07-27 06:13:26,330 | INFO     | 
[2025-07-27 02:13:58] 2025-07-27 06:13:26,330 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-27 02:13:58] 2025-07-27 06:13:26,360 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 02:13:58] 2025-07-27 06:13:26,361 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 02:13:58] 2025-07-27 06:13:26,361 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 02:13:58] 2025-07-27 06:13:26,361 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 02:13:58] 2025-07-27 06:13:26,361 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 02:13:58] 2025-07-27 06:13:26,361 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 02:13:58] 2025-07-27 06:13:26,361 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 02:13:58] 2025-07-27 06:13:26,361 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 02:13:58] 2025-07-27 06:13:26,361 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 02:13:58] 2025-07-27 06:13:26,362 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 02:13:58] 2025-07-27 06:13:26,362 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 02:13:58] 2025-07-27 06:13:26,362 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 02:13:58] 2025-07-27 06:13:26,362 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 02:13:58] 2025-07-27 06:13:26,362 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 02:13:58] 2025-07-27 06:13:26,362 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 02:13:58] 2025-07-27 06:13:26,362 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 02:13:58] 2025-07-27 06:13:26,362 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 02:13:58] 2025-07-27 06:13:26,362 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 02:13:58] 2025-07-27 06:13:26,362 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 02:13:58] 2025-07-27 06:13:26,362 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 02:13:58] 2025-07-27 06:13:26,363 | INFO     | job 6745821866 has completed (purged errors)
[2025-07-27 02:13:58] 2025-07-27 06:13:26,363 | INFO     | overall cleanup function is called
[2025-07-27 02:13:58] 2025-07-27 06:13:27,371 | INFO     | --- collectZombieJob: --- 10, [2668566]
[2025-07-27 02:13:58] 2025-07-27 06:13:27,371 | INFO     | zombie collector waiting for pid 2668566
[2025-07-27 02:13:58] 2025-07-27 06:13:27,371 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 02:13:58] 2025-07-27 06:13:27,372 | INFO     | collected zombie processes
[2025-07-27 02:13:58] 2025-07-27 06:13:27,372 | INFO     | will attempt to kill all subprocesses of pid=2668566
[2025-07-27 02:13:58] 2025-07-27 06:13:27,800 | INFO     | process IDs to be killed: [2668566] (in reverse order)
[2025-07-27 02:13:58] 2025-07-27 06:13:27,938 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 02:13:58] 2025-07-27 06:13:27,938 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 02:13:58] 2025-07-27 06:13:27,956 | INFO     | did not find any defunct processes belonging to 2668566
[2025-07-27 02:13:58] 2025-07-27 06:13:27,980 | INFO     | did not find any defunct processes belonging to 2668566
[2025-07-27 02:13:58] 2025-07-27 06:13:27,981 | INFO     | ready for new job
[2025-07-27 02:13:58] 2025-07-27 06:13:27,981 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 02:13:58] 2025-07-27 06:13:27,984 | INFO     | ***************************************
[2025-07-27 02:13:58] 2025-07-27 06:13:27,985 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 02:13:58] 2025-07-27 06:13:27,985 | INFO     | ***************************************
[2025-07-27 02:13:58] 2025-07-27 06:13:27,985 | INFO     | 
[2025-07-27 02:13:58] 2025-07-27 06:13:28,003 | INFO     | architecture information:
[2025-07-27 02:13:58] 2025-07-27 06:13:28,004 | INFO     | executing command: cat /etc/os-release
[2025-07-27 02:13:58] 2025-07-27 06:13:28,030 | INFO     | cat /etc/os-release:
[2025-07-27 02:13:58] NAME="CentOS Linux"
[2025-07-27 02:13:58] VERSION="7 (Core)"
[2025-07-27 02:13:58] ID="centos"
[2025-07-27 02:13:58] ID_LIKE="rhel fedora"
[2025-07-27 02:13:58] VERSION_ID="7"
[2025-07-27 02:13:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 02:13:58] ANSI_COLOR="0;31"
[2025-07-27 02:13:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 02:13:58] HOME_URL="https://www.centos.org/"
[2025-07-27 02:13:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 02:13:58] 
[2025-07-27 02:13:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 02:13:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 02:13:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 02:13:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 02:13:58] 
[2025-07-27 02:13:58] 2025-07-27 06:13:28,030 | INFO     | ***************************************
[2025-07-27 02:13:58] 2025-07-27 06:13:28,533 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-27 02:13:58] 2025-07-27 06:13:28,564 | INFO     | sufficient remaining disk space (95347015680 B)
[2025-07-27 02:13:58] 2025-07-27 06:13:28,565 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 02:13:58] 2025-07-27 06:13:28,565 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 02:13:58] 2025-07-27 06:13:28,565 | INFO     | update_server=False
[2025-07-27 02:13:58] 2025-07-27 06:13:28,565 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 02:13:58] 2025-07-27 06:13:28,566 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 02:13:58] 2025-07-27 06:13:28,635 | INFO     | all data control threads have been joined
[2025-07-27 02:13:58] 2025-07-27 06:13:28,964 | INFO     | all payload control threads have been joined
[2025-07-27 02:13:58] 2025-07-27 06:13:29,123 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 02:13:58] 2025-07-27 06:13:29,139 | INFO     | all job control threads have been joined
[2025-07-27 02:13:58] 2025-07-27 06:13:29,492 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 02:13:58] 2025-07-27 06:13:29,493 | INFO     | aborting loop
[2025-07-27 02:13:58] 2025-07-27 06:13:29,571 | INFO     | [job] retrieve thread has finished
[2025-07-27 02:13:58] 2025-07-27 06:13:29,643 | INFO     | [data] control thread has finished
[2025-07-27 02:13:58] 2025-07-27 06:13:29,854 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 02:13:58] 2025-07-27 06:13:29,970 | INFO     | [payload] control thread has finished
[2025-07-27 02:13:58] 2025-07-27 06:13:30,000 | INFO     | [job] validate thread has finished
[2025-07-27 02:13:58] 2025-07-27 06:13:30,053 | INFO     | [payload] failed_post thread has finished
[2025-07-27 02:13:58] 2025-07-27 06:13:30,101 | INFO     | [data] copytool_in thread has finished
[2025-07-27 02:13:58] 2025-07-27 06:13:30,144 | INFO     | [job] control thread has finished
[2025-07-27 02:13:58] 2025-07-27 06:13:30,212 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 02:13:58] 2025-07-27 06:13:30,498 | INFO     | [job] job monitor thread has finished
[2025-07-27 02:13:58] 2025-07-27 06:13:30,866 | INFO     | [payload] validate_post thread has finished
[2025-07-27 02:13:58] 2025-07-27 06:13:31,014 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 02:13:58] 2025-07-27 06:13:31,036 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 02:13:58] 2025-07-27 06:13:31,129 | INFO     | [data] copytool_out thread has finished
[2025-07-27 02:13:58] 2025-07-27 06:13:32,041 | INFO     | [job] queue monitor thread has finished
[2025-07-27 02:13:58] 2025-07-27 06:13:32,575 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 02:13:58] 2025-07-27 06:13:39,099 | INFO     | job.realtimelogging is not enabled
[2025-07-27 02:13:58] 2025-07-27 06:13:40,104 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 02:13:58] 2025-07-27 06:13:41,512 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140196857579328)>', '<ExcThread(monitor, started 140196213401344)>']
[2025-07-27 02:13:58] 2025-07-27 06:13:46,539 | INFO     | all workflow threads have been joined
[2025-07-27 02:13:58] 2025-07-27 06:13:46,540 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 02:13:58] 2025-07-27 06:13:46,541 | INFO     | traces error code: 0
[2025-07-27 02:13:58] 2025-07-27 06:13:46,541 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 02:13:58] 2025-07-27 06:13:58,247 | INFO     | PID=2659842 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 02:13:58] 2025-07-27 06:13:58,248 | INFO     | .. there are 17 such processes running
[2025-07-27 02:13:58] 2025-07-27 06:13:58,251 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 02:13:58] 2025-07-27 06:13:58,251 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 02:13:58] 2025-07-27 06:13:58,251 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 02:13:58] 2025-07-27 06:13:58,251 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 02:13:58] 2025-07-27 06:13:58,251 | INFO     | [monitor] control thread has ended
[2025-07-27 02:13:58] 2025-07-27 06:13:58,496 [wrapper] ==== pilot stdout END ====
[2025-07-27 02:13:58] 2025-07-27 06:13:58,500 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 02:13:58] 2025-07-27 06:13:58,505 [wrapper] pilotpid: 2659842
[2025-07-27 02:13:58] 2025-07-27 06:13:58,509 [wrapper] Pilot exit status: 0
[2025-07-27 02:13:58] 2025-07-27 06:13:58,521 [wrapper] pandaids: 6745821866
[2025-07-27 02:13:58] 2025-07-27 06:13:58,609 [wrapper] cleanup supervisor_pilot 3202591 2659843
[2025-07-27 02:13:58] 2025-07-27 06:13:58,613 [wrapper] Test setup, not cleaning
[2025-07-27 02:13:58] 2025-07-27 06:13:58,617 [wrapper] apfmon messages muted
[2025-07-27 02:13:58] 2025-07-27 06:13:58,621 [wrapper] ==== wrapper stdout END ====
[2025-07-27 02:13:58] 2025-07-27 06:13:58,624 [wrapper] ==== wrapper stderr END ====
[2025-07-27 02:13:58]  *** Error codes and diagnostics ***
[2025-07-27 02:13:58]     "exeErrorCode": 0,
[2025-07-27 02:13:58]     "exeErrorDiag": "",
[2025-07-27 02:13:58]     "pilotErrorCode": 0,
[2025-07-27 02:13:58]     "pilotErrorDiag": "",
[2025-07-27 02:13:58]  *** Listing of results directory ***
[2025-07-27 02:13:58] total 414816
[2025-07-27 02:13:58] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 17:42 pilot3.tar.gz
[2025-07-27 02:13:58] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 17:58 queuedata.json
[2025-07-27 02:13:58] -rwx------. 1 boincer umatlas     36292 Jul 26 17:59 runpilot2-wrapper.sh
[2025-07-27 02:13:58] -rw-r--r--. 1 boincer umatlas       100 Jul 26 23:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 02:13:58] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 23:12 run_atlas
[2025-07-27 02:13:58] -rw-r--r--. 1 boincer umatlas       105 Jul 26 23:12 job.xml
[2025-07-27 02:13:58] -rw-r--r--. 2 boincer umatlas 240642478 Jul 26 23:12 EVNT.45758314._000003.pool.root.1
[2025-07-27 02:13:58] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 23:12 start_atlas.sh
[2025-07-27 02:13:58] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 23:12 shared
[2025-07-27 02:13:58] -rw-r--r--. 2 boincer umatlas    542890 Jul 26 23:12 input.tar.gz
[2025-07-27 02:13:58] -rw-r--r--. 1 boincer umatlas         0 Jul 26 23:12 boinc_lockfile
[2025-07-27 02:13:58] -rw-r--r--. 1 boincer umatlas      2568 Jul 26 23:12 pandaJob.out
[2025-07-27 02:13:58] -rw-------. 1 boincer umatlas    980117 Jul 26 23:13 agis_schedconf.cvmfs.json
[2025-07-27 02:13:58] -rw-------. 1 boincer umatlas   1593052 Jul 26 23:13 agis_ddmendpoints.agis.ALL.json
[2025-07-27 02:13:58] drwx------. 4 boincer umatlas      4096 Jul 26 23:13 pilot3
[2025-07-27 02:13:58] -rw-r--r--. 1 boincer umatlas      6860 Jul 27 02:11 init_data.xml
[2025-07-27 02:13:58] -rw-------. 1 boincer umatlas 177706748 Jul 27 02:12 HITS.45758316._000060.pool.root.1
[2025-07-27 02:13:58] -rw-r--r--. 1 boincer umatlas       530 Jul 27 02:12 boinc_task_state.xml
[2025-07-27 02:13:58] -rw-------. 1 boincer umatlas      1042 Jul 27 02:13 memory_monitor_summary.json
[2025-07-27 02:13:58] -rw-------. 1 boincer umatlas    359758 Jul 27 02:13 log.45758316._000060.job.log.tgz.1
[2025-07-27 02:13:58] -rw-------. 1 boincer umatlas      7824 Jul 27 02:13 heartbeat.json
[2025-07-27 02:13:58] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 02:13 boinc_mmap_file
[2025-07-27 02:13:58] -rw-r--r--. 1 boincer umatlas        28 Jul 27 02:13 wrapper_checkpoint.txt
[2025-07-27 02:13:58] -rw-------. 1 boincer umatlas        95 Jul 27 02:13 pilot_heartbeat.json
[2025-07-27 02:13:58] -rw-------. 1 boincer umatlas       823 Jul 27 02:13 pilotlog.txt
[2025-07-27 02:13:58] -rw-------. 1 boincer umatlas    916116 Jul 27 02:13 log.45758316._000060.job.log.1
[2025-07-27 02:13:58] -rw-------. 1 boincer umatlas       357 Jul 27 02:13 output.list
[2025-07-27 02:13:58] -rw-r--r--. 1 boincer umatlas       620 Jul 27 02:13 runtime_log
[2025-07-27 02:13:58] -rw-------. 1 boincer umatlas   1290240 Jul 27 02:13 result.tar.gz
[2025-07-27 02:13:58] -rw-------. 1 boincer umatlas       657 Jul 27 02:13 uyDNDmJ61z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjHTLDmwmzlVo.diag
[2025-07-27 02:13:58] -rw-r--r--. 1 boincer umatlas      8671 Jul 27 02:13 runtime_log.err
[2025-07-27 02:13:58] -rw-r--r--. 1 boincer umatlas     21292 Jul 27 02:13 stderr.txt
[2025-07-27 02:13:58] HITS file was successfully produced:
[2025-07-27 02:13:58] -rw-------. 1 boincer umatlas 177706748 Jul 27 02:12 shared/HITS.pool.root.1
[2025-07-27 02:13:58]  *** Contents of shared directory: ***
[2025-07-27 02:13:58] total 410364
[2025-07-27 02:13:58] -rw-r--r--. 2 boincer umatlas 240642478 Jul 26 23:12 ATLAS.root_0
[2025-07-27 02:13:58] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 23:12 start_atlas.sh
[2025-07-27 02:13:58] -rw-r--r--. 2 boincer umatlas    542890 Jul 26 23:12 input.tar.gz
[2025-07-27 02:13:58] -rw-------. 1 boincer umatlas 177706748 Jul 27 02:12 HITS.pool.root.1
[2025-07-27 02:13:58] -rw-------. 1 boincer umatlas   1290240 Jul 27 02:13 result.tar.gz
02:13:59 (2655885): run_atlas exited; CPU time 59082.087598
02:13:59 (2655885): called boinc_finish(0)

</stderr_txt>
]]>

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