Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:44:27 (4075405): wrapper (7.7.26015): starting
00:44:27 (4075405): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 00:44:27] Arguments: --nthreads 12
[2025-07-27 00:44:27] Threads: 12
[2025-07-27 00:44:27] Checking for CVMFS
[2025-07-27 00:44:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 00:44:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 00:44:27] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 00:44:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 00:44:27] 2.13.0.0 1889558 17901 304280 148800 0 217 39694724 40960000 11835 16776704 1 51365991 99.817 41613057 29399 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 00:44:27] CVMFS is ok
[2025-07-27 00:44:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 00:44:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 00:44:27] Further information can be found at the LHC@home message board.
[2025-07-27 00:44:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 00:44:27] Checking for apptainer binary...
[2025-07-27 00:44:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 00:44:27] Running /usr/bin/apptainer --version
[2025-07-27 00:44:27] apptainer version 1.4.1-1.el9
[2025-07-27 00:44:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 00:44:28] c6-5-7-1.aglt2.org
[2025-07-27 00:44:28] apptainer works
[2025-07-27 00:44:28] Set ATHENA_PROC_NUMBER=12
[2025-07-27 00:44:28] Set ATHENA_CORE_NUMBER=12
[2025-07-27 00:44:28] Starting ATLAS job with PandaID=6745821905
[2025-07-27 00:44:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 02:14:46]  *** The last 200 lines of the pilot log: ***
[2025-07-27 02:14:46]  mtime=0
[2025-07-27 02:14:46]  protocol_id=None
[2025-07-27 02:14:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 02:14:46]  replicas=None
[2025-07-27 02:14:46]  scope=mc23_13p6TeV
[2025-07-27 02:14:46]  status=None
[2025-07-27 02:14:46]  status_code=0
[2025-07-27 02:14:46]  storage_token=
[2025-07-27 02:14:46]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745821905/log.45758316._000099.job.log.tgz.1
[2025-07-27 02:14:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6c/93/log.45758316._000099.job.log.tgz.1
[2025-07-27 02:14:46]  workdir=None
[2025-07-27 02:14:46] ]
[2025-07-27 02:14:46] 2025-07-27 06:14:08,075 | INFO     | transferring file log.45758316._000099.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745821905/log.45758316._000099.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 02:14:46] 2025-07-27 06:14:08,076 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745821905/log.45758316._000099.job.log.tgz.1 /tmp/boinchome/slots/0/log.45758316._000099.job
[2025-07-27 02:14:46] 2025-07-27 06:14:08,099 | INFO     | adding to output.list: log.45758316._000099.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6c/93/log.45758316._000099.job.log.tg
[2025-07-27 02:14:46] 2025-07-27 06:14:08,100 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 02:14:46] 2025-07-27 06:14:08,100 | INFO     | summary of transferred files:
[2025-07-27 02:14:46] 2025-07-27 06:14:08,100 | INFO     |  -- lfn=log.45758316._000099.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 02:14:46] 2025-07-27 06:14:08,100 | INFO     | stage-out finished correctly
[2025-07-27 02:14:46] 2025-07-27 06:14:08,198 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 02:14:46] 2025-07-27 06:14:08,293 | INFO     | job 6745821905 has state=finished
[2025-07-27 02:14:46] 2025-07-27 06:14:08,293 | INFO     | preparing for final server update for job 6745821905 in state='finished'
[2025-07-27 02:14:46] 2025-07-27 06:14:08,294 | INFO     | this job has now completed (state=finished)
[2025-07-27 02:14:46] 2025-07-27 06:14:08,294 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 02:14:46] 2025-07-27 06:14:08,294 | INFO     | log transfer has been attempted: DONE
[2025-07-27 02:14:46] 2025-07-27 06:14:08,294 | INFO     | job 6745821905 has finished - writing final server update
[2025-07-27 02:14:46] 2025-07-27 06:14:08,294 | INFO     | total number of processed events: 400 (read)
[2025-07-27 02:14:46] 2025-07-27 06:14:08,295 | INFO     | executing command: lscpu
[2025-07-27 02:14:46] 2025-07-27 06:14:08,360 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 02:14:46] 2025-07-27 06:14:10,694 | WARNING  | process 4086799 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 02:14:46] 2025-07-27 06:14:10,694 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745821905/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 02:14:46] 2025-07-27 06:14:10,932 | INFO     | number of running child processes to parent process 4086799: 1
[2025-07-27 02:14:46] 2025-07-27 06:14:10,932 | INFO     | maximum number of monitored processes: 6
[2025-07-27 02:14:46] 2025-07-27 06:14:13,435 | INFO     | monitor loop #391: job 0:6745821905 is in state 'finished'
[2025-07-27 02:14:46] 2025-07-27 06:14:13,435 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 02:14:46] 2025-07-27 06:14:13,650 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 02:14:46] 2025-07-27 06:14:13,657 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2768.2585892857146
[2025-07-27 02:14:46] 2025-07-27 06:14:13,666 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745821905/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 02:14:46] 2025-07-27 06:14:13,666 | INFO     | extracted standard info from prmon json
[2025-07-27 02:14:46] 2025-07-27 06:14:13,666 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 02:14:46] 2025-07-27 06:14:13,666 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 02:14:46] 2025-07-27 06:14:13,667 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 02:14:46] 2025-07-27 06:14:13,667 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 02:14:46] 2025-07-27 06:14:13,668 | INFO     | fitting pss+swap vs Time
[2025-07-27 02:14:46] 2025-07-27 06:14:13,669 | INFO     | sum of square deviations: 164762708.98765457
[2025-07-27 02:14:46] 2025-07-27 06:14:13,669 | INFO     | sum of deviations: -12934529222.407406
[2025-07-27 02:14:46] 2025-07-27 06:14:13,669 | INFO     | mean x: 1753594252.0123458
[2025-07-27 02:14:46] 2025-07-27 06:14:13,669 | INFO     | mean y: 2477002.407407407
[2025-07-27 02:14:46] 2025-07-27 06:14:13,669 | INFO     | -- intersect: 137666613725.2314
[2025-07-27 02:14:46] 2025-07-27 06:14:13,669 | INFO     | intersect: 137666613725.2314
[2025-07-27 02:14:46] 2025-07-27 06:14:13,670 | INFO     | chi2: 0.17554391674233946
[2025-07-27 02:14:46] 2025-07-27 06:14:13,670 | INFO     | -- intersect: 137666613725.2314
[2025-07-27 02:14:46] 2025-07-27 06:14:13,670 | INFO     | current memory leak: -78.50 B/s (using 81 data points, chi2=0.18)
[2025-07-27 02:14:46] 2025-07-27 06:14:13,670 | INFO     | could have reported an average CPU frequency of 2728 MHz (6 samples)
[2025-07-27 02:14:46] 2025-07-27 06:14:13,670 | INFO     | ..............................
[2025-07-27 02:14:46] 2025-07-27 06:14:13,670 | INFO     | . Timing measurements:
[2025-07-27 02:14:46] 2025-07-27 06:14:13,670 | INFO     | . get job = 0 s
[2025-07-27 02:14:46] 2025-07-27 06:14:13,670 | INFO     | . initial setup = 2 s
[2025-07-27 02:14:46] 2025-07-27 06:14:13,670 | INFO     | . payload setup = 7 s
[2025-07-27 02:14:46] 2025-07-27 06:14:13,671 | INFO     | . stage-in = 0 s
[2025-07-27 02:14:46] 2025-07-27 06:14:13,671 | INFO     | . payload execution = 5341 s
[2025-07-27 02:14:46] 2025-07-27 06:14:13,671 | INFO     | . stage-out = 0 s
[2025-07-27 02:14:46] 2025-07-27 06:14:13,671 | INFO     | . log creation = 0 s
[2025-07-27 02:14:46] 2025-07-27 06:14:13,671 | INFO     | ..............................
[2025-07-27 02:14:46] 2025-07-27 06:14:13,965 | INFO     | 
[2025-07-27 02:14:46] 2025-07-27 06:14:13,965 | INFO     | job summary report
[2025-07-27 02:14:46] 2025-07-27 06:14:13,965 | INFO     | --------------------------------------------------
[2025-07-27 02:14:46] 2025-07-27 06:14:13,965 | INFO     | PanDA job id: 6745821905
[2025-07-27 02:14:46] 2025-07-27 06:14:13,966 | INFO     | task id: 45758316
[2025-07-27 02:14:46] 2025-07-27 06:14:13,966 | INFO     | errors: (none)
[2025-07-27 02:14:46] 2025-07-27 06:14:13,966 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 02:14:46] 2025-07-27 06:14:13,966 | INFO     | pilot state: finished 
[2025-07-27 02:14:46] 2025-07-27 06:14:13,966 | INFO     | transexitcode: 0
[2025-07-27 02:14:46] 2025-07-27 06:14:13,966 | INFO     | exeerrorcode: 0
[2025-07-27 02:14:46] 2025-07-27 06:14:13,966 | INFO     | exeerrordiag: 
[2025-07-27 02:14:46] 2025-07-27 06:14:13,966 | INFO     | exitcode: 0
[2025-07-27 02:14:46] 2025-07-27 06:14:13,966 | INFO     | exitmsg: OK
[2025-07-27 02:14:46] 2025-07-27 06:14:13,966 | INFO     | cpuconsumptiontime: 49437 s
[2025-07-27 02:14:46] 2025-07-27 06:14:13,966 | INFO     | nevents: 400
[2025-07-27 02:14:46] 2025-07-27 06:14:13,966 | INFO     | neventsw: 0
[2025-07-27 02:14:46] 2025-07-27 06:14:13,967 | INFO     | pid: 4086799
[2025-07-27 02:14:46] 2025-07-27 06:14:13,967 | INFO     | pgrp: 4086799
[2025-07-27 02:14:46] 2025-07-27 06:14:13,967 | INFO     | corecount: 12
[2025-07-27 02:14:46] 2025-07-27 06:14:13,967 | INFO     | event service: False
[2025-07-27 02:14:46] 2025-07-27 06:14:13,967 | INFO     | sizes: {0: 2397304, 1: 2397503, 5: 2397765, 11: 2397821, 5352: 2424239, 5353: 2433421, 5359: 2433559}
[2025-07-27 02:14:46] 2025-07-27 06:14:13,967 | INFO     | --------------------------------------------------
[2025-07-27 02:14:46] 2025-07-27 06:14:13,967 | INFO     | 
[2025-07-27 02:14:46] 2025-07-27 06:14:13,967 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 02:14:46] 2025-07-27 06:14:13,987 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 02:14:46] 2025-07-27 06:14:13,988 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 02:14:46] 2025-07-27 06:14:13,988 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 02:14:46] 2025-07-27 06:14:13,988 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 02:14:46] 2025-07-27 06:14:13,988 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 02:14:46] 2025-07-27 06:14:13,988 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 02:14:46] 2025-07-27 06:14:13,988 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 02:14:46] 2025-07-27 06:14:13,989 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 02:14:46] 2025-07-27 06:14:13,989 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 02:14:46] 2025-07-27 06:14:13,989 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 02:14:46] 2025-07-27 06:14:13,989 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 02:14:46] 2025-07-27 06:14:13,989 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 02:14:46] 2025-07-27 06:14:13,989 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 02:14:46] 2025-07-27 06:14:13,989 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 02:14:46] 2025-07-27 06:14:13,989 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 02:14:46] 2025-07-27 06:14:13,989 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 02:14:46] 2025-07-27 06:14:13,989 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 02:14:46] 2025-07-27 06:14:13,990 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 02:14:46] 2025-07-27 06:14:13,990 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 02:14:46] 2025-07-27 06:14:13,990 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 02:14:46] 2025-07-27 06:14:13,990 | INFO     | job 6745821905 has completed (purged errors)
[2025-07-27 02:14:46] 2025-07-27 06:14:13,990 | INFO     | overall cleanup function is called
[2025-07-27 02:14:46] 2025-07-27 06:14:14,999 | INFO     | --- collectZombieJob: --- 10, [4086799]
[2025-07-27 02:14:46] 2025-07-27 06:14:15,000 | INFO     | zombie collector waiting for pid 4086799
[2025-07-27 02:14:46] 2025-07-27 06:14:15,000 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 02:14:46] 2025-07-27 06:14:15,000 | INFO     | collected zombie processes
[2025-07-27 02:14:46] 2025-07-27 06:14:15,000 | INFO     | will attempt to kill all subprocesses of pid=4086799
[2025-07-27 02:14:46] 2025-07-27 06:14:15,339 | INFO     | process IDs to be killed: [4086799] (in reverse order)
[2025-07-27 02:14:46] 2025-07-27 06:14:15,444 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 02:14:46] 2025-07-27 06:14:15,444 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 02:14:46] 2025-07-27 06:14:15,458 | INFO     | did not find any defunct processes belonging to 4086799
[2025-07-27 02:14:46] 2025-07-27 06:14:15,471 | INFO     | did not find any defunct processes belonging to 4086799
[2025-07-27 02:14:46] 2025-07-27 06:14:15,472 | INFO     | ready for new job
[2025-07-27 02:14:46] 2025-07-27 06:14:15,472 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 02:14:46] 2025-07-27 06:14:15,474 | INFO     | ***************************************
[2025-07-27 02:14:46] 2025-07-27 06:14:15,474 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 02:14:46] 2025-07-27 06:14:15,474 | INFO     | ***************************************
[2025-07-27 02:14:46] 2025-07-27 06:14:15,474 | INFO     | 
[2025-07-27 02:14:46] 2025-07-27 06:14:15,491 | INFO     | architecture information:
[2025-07-27 02:14:46] 2025-07-27 06:14:15,491 | INFO     | executing command: cat /etc/os-release
[2025-07-27 02:14:46] 2025-07-27 06:14:15,507 | INFO     | cat /etc/os-release:
[2025-07-27 02:14:46] NAME="CentOS Linux"
[2025-07-27 02:14:46] VERSION="7 (Core)"
[2025-07-27 02:14:46] ID="centos"
[2025-07-27 02:14:46] ID_LIKE="rhel fedora"
[2025-07-27 02:14:46] VERSION_ID="7"
[2025-07-27 02:14:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 02:14:46] ANSI_COLOR="0;31"
[2025-07-27 02:14:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 02:14:46] HOME_URL="https://www.centos.org/"
[2025-07-27 02:14:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 02:14:46] 
[2025-07-27 02:14:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 02:14:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 02:14:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 02:14:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 02:14:46] 
[2025-07-27 02:14:46] 2025-07-27 06:14:15,508 | INFO     | ***************************************
[2025-07-27 02:14:46] 2025-07-27 06:14:16,011 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 02:14:46] 2025-07-27 06:14:16,027 | INFO     | sufficient remaining disk space (71163707392 B)
[2025-07-27 02:14:46] 2025-07-27 06:14:16,027 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 02:14:46] 2025-07-27 06:14:16,027 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 02:14:46] 2025-07-27 06:14:16,027 | INFO     | update_server=False
[2025-07-27 02:14:46] 2025-07-27 06:14:16,027 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 02:14:46] 2025-07-27 06:14:16,215 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 02:14:46] 2025-07-27 06:14:16,535 | INFO     | all data control threads have been joined
[2025-07-27 02:14:46] 2025-07-27 06:14:16,943 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 02:14:46] 2025-07-27 06:14:16,943 | INFO     | aborting loop
[2025-07-27 02:14:46] 2025-07-27 06:14:17,032 | INFO     | [job] retrieve thread has finished
[2025-07-27 02:14:46] 2025-07-27 06:14:17,322 | INFO     | all job control threads have been joined
[2025-07-27 02:14:46] 2025-07-27 06:14:17,364 | INFO     | [payload] validate_post thread has finished
[2025-07-27 02:14:46] 2025-07-27 06:14:17,367 | INFO     | all payload control threads have been joined
[2025-07-27 02:14:46] 2025-07-27 06:14:17,536 | INFO     | [data] copytool_in thread has finished
[2025-07-27 02:14:46] 2025-07-27 06:14:17,540 | INFO     | [data] control thread has finished
[2025-07-27 02:14:46] 2025-07-27 06:14:17,669 | INFO     | [job] validate thread has finished
[2025-07-27 02:14:46] 2025-07-27 06:14:17,948 | INFO     | [job] job monitor thread has finished
[2025-07-27 02:14:46] 2025-07-27 06:14:17,975 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 02:14:46] 2025-07-27 06:14:18,183 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 02:14:46] 2025-07-27 06:14:18,220 | INFO     | [data] copytool_out thread has finished
[2025-07-27 02:14:46] 2025-07-27 06:14:18,327 | INFO     | [job] control thread has finished
[2025-07-27 02:14:46] 2025-07-27 06:14:18,345 | INFO     | [payload] failed_post thread has finished
[2025-07-27 02:14:46] 2025-07-27 06:14:18,360 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 02:14:46] 2025-07-27 06:14:18,372 | INFO     | [payload] control thread has finished
[2025-07-27 02:14:46] 2025-07-27 06:14:18,764 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 02:14:46] 2025-07-27 06:14:18,804 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 02:14:46] 2025-07-27 06:14:19,769 | INFO     | [job] queue monitor thread has finished
[2025-07-27 02:14:46] 2025-07-27 06:14:22,810 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 02:14:46] 2025-07-27 06:14:27,060 | INFO     | job.realtimelogging is not enabled
[2025-07-27 02:14:46] 2025-07-27 06:14:28,065 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 02:14:46] 2025-07-27 06:14:29,281 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140204737292096)>', '<ExcThread(monitor, started 140203939313408)>']
[2025-07-27 02:14:46] 2025-07-27 06:14:34,306 | INFO     | all workflow threads have been joined
[2025-07-27 02:14:46] 2025-07-27 06:14:34,306 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 02:14:46] 2025-07-27 06:14:34,307 | INFO     | traces error code: 0
[2025-07-27 02:14:46] 2025-07-27 06:14:34,307 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 02:14:46] 2025-07-27 06:14:35,782 [wrapper] supervise_pilot (15 min periods counter: 7)
[2025-07-27 02:14:46] 2025-07-27 06:14:46,145 | INFO     | PID=4079175 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 02:14:46] 2025-07-27 06:14:46,146 | INFO     | .. there are 15 such processes running
[2025-07-27 02:14:46] 2025-07-27 06:14:46,147 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 02:14:46] 2025-07-27 06:14:46,147 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 02:14:46] 2025-07-27 06:14:46,147 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 02:14:46] 2025-07-27 06:14:46,147 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 02:14:46] 2025-07-27 06:14:46,147 | INFO     | [monitor] control thread has ended
[2025-07-27 02:14:46] 2025-07-27 06:14:46,311 [wrapper] ==== pilot stdout END ====
[2025-07-27 02:14:46] 2025-07-27 06:14:46,315 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 02:14:46] 2025-07-27 06:14:46,317 [wrapper] pilotpid: 4079175
[2025-07-27 02:14:46] 2025-07-27 06:14:46,320 [wrapper] Pilot exit status: 0
[2025-07-27 02:14:46] 2025-07-27 06:14:46,338 [wrapper] pandaids: 6745821905
[2025-07-27 02:14:46] 2025-07-27 06:14:46,406 [wrapper] cleanup supervisor_pilot  290436 4079176
[2025-07-27 02:14:46] 2025-07-27 06:14:46,409 [wrapper] Test setup, not cleaning
[2025-07-27 02:14:46] 2025-07-27 06:14:46,412 [wrapper] apfmon messages muted
[2025-07-27 02:14:46] 2025-07-27 06:14:46,415 [wrapper] ==== wrapper stdout END ====
[2025-07-27 02:14:46] 2025-07-27 06:14:46,418 [wrapper] ==== wrapper stderr END ====
[2025-07-27 02:14:46]  *** Error codes and diagnostics ***
[2025-07-27 02:14:46]     "exeErrorCode": 0,
[2025-07-27 02:14:46]     "exeErrorDiag": "",
[2025-07-27 02:14:46]     "pilotErrorCode": 0,
[2025-07-27 02:14:46]     "pilotErrorDiag": "",
[2025-07-27 02:14:46]  *** Listing of results directory ***
[2025-07-27 02:14:46] total 409244
[2025-07-27 02:14:46] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 17:42 pilot3.tar.gz
[2025-07-27 02:14:46] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 18:00 queuedata.json
[2025-07-27 02:14:46] -rwx------. 1 boincer umatlas     36292 Jul 26 18:01 runpilot2-wrapper.sh
[2025-07-27 02:14:46] -rw-r--r--. 1 boincer umatlas       100 Jul 27 00:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 02:14:46] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 00:44 run_atlas
[2025-07-27 02:14:46] -rw-r--r--. 1 boincer umatlas       105 Jul 27 00:44 job.xml
[2025-07-27 02:14:46] -rw-r--r--. 2 boincer umatlas 243860166 Jul 27 00:44 EVNT.45758314._000004.pool.root.1
[2025-07-27 02:14:46] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 00:44 start_atlas.sh
[2025-07-27 02:14:46] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 00:44 shared
[2025-07-27 02:14:46] -rw-r--r--. 2 boincer umatlas    542895 Jul 27 00:44 input.tar.gz
[2025-07-27 02:14:46] -rw-r--r--. 1 boincer umatlas         0 Jul 27 00:44 boinc_lockfile
[2025-07-27 02:14:46] -rw-r--r--. 1 boincer umatlas      2568 Jul 27 00:44 pandaJob.out
[2025-07-27 02:14:46] -rw-------. 1 boincer umatlas    980125 Jul 27 00:44 agis_schedconf.cvmfs.json
[2025-07-27 02:14:46] -rw-------. 1 boincer umatlas   1593052 Jul 27 00:44 agis_ddmendpoints.agis.ALL.json
[2025-07-27 02:14:46] drwx------. 4 boincer umatlas      4096 Jul 27 00:44 pilot3
[2025-07-27 02:14:46] -rw-r--r--. 1 boincer umatlas      6839 Jul 27 02:10 init_data.xml
[2025-07-27 02:14:46] -rw-r--r--. 1 boincer umatlas       529 Jul 27 02:13 boinc_task_state.xml
[2025-07-27 02:14:46] -rw-------. 1 boincer umatlas 169523696 Jul 27 02:13 HITS.45758316._000099.pool.root.1
[2025-07-27 02:14:46] -rw-------. 1 boincer umatlas      1039 Jul 27 02:14 memory_monitor_summary.json
[2025-07-27 02:14:46] -rw-------. 1 boincer umatlas    385557 Jul 27 02:14 log.45758316._000099.job.log.tgz.1
[2025-07-27 02:14:46] -rw-------. 1 boincer umatlas      7816 Jul 27 02:14 heartbeat.json
[2025-07-27 02:14:46] -rw-r--r--. 1 boincer umatlas        27 Jul 27 02:14 wrapper_checkpoint.txt
[2025-07-27 02:14:46] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 02:14 boinc_mmap_file
[2025-07-27 02:14:46] -rw-------. 1 boincer umatlas        95 Jul 27 02:14 pilot_heartbeat.json
[2025-07-27 02:14:46] -rw-------. 1 boincer umatlas       823 Jul 27 02:14 pilotlog.txt
[2025-07-27 02:14:46] -rw-------. 1 boincer umatlas    518504 Jul 27 02:14 log.45758316._000099.job.log.1
[2025-07-27 02:14:46] -rw-------. 1 boincer umatlas       357 Jul 27 02:14 output.list
[2025-07-27 02:14:46] -rw-r--r--. 1 boincer umatlas       620 Jul 27 02:14 runtime_log
[2025-07-27 02:14:46] -rw-------. 1 boincer umatlas    921600 Jul 27 02:14 result.tar.gz
[2025-07-27 02:14:46] -rw-------. 1 boincer umatlas       653 Jul 27 02:14 wmkLDmF81z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4HTLDm2yj7Nn.diag
[2025-07-27 02:14:46] -rw-r--r--. 1 boincer umatlas      8662 Jul 27 02:14 runtime_log.err
[2025-07-27 02:14:46] -rw-r--r--. 1 boincer umatlas     21720 Jul 27 02:14 stderr.txt
[2025-07-27 02:14:46] HITS file was successfully produced:
[2025-07-27 02:14:46] -rw-------. 1 boincer umatlas 169523696 Jul 27 02:13 shared/HITS.pool.root.1
[2025-07-27 02:14:46]  *** Contents of shared directory: ***
[2025-07-27 02:14:46] total 405152
[2025-07-27 02:14:46] -rw-r--r--. 2 boincer umatlas 243860166 Jul 27 00:44 ATLAS.root_0
[2025-07-27 02:14:46] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 00:44 start_atlas.sh
[2025-07-27 02:14:46] -rw-r--r--. 2 boincer umatlas    542895 Jul 27 00:44 input.tar.gz
[2025-07-27 02:14:46] -rw-------. 1 boincer umatlas 169523696 Jul 27 02:13 HITS.pool.root.1
[2025-07-27 02:14:46] -rw-------. 1 boincer umatlas    921600 Jul 27 02:14 result.tar.gz
02:14:47 (4075405): run_atlas exited; CPU time 49456.811937
02:14:47 (4075405): called boinc_finish(0)

</stderr_txt>
]]>

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