Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-27 05:09:57 (1274264): Detected: vboxwrapper 26206
2025-07-27 05:09:57 (1274264): Detected: BOINC client v8.2.5
2025-07-27 05:09:57 (1274264): Detected: VirtualBox VboxManage Interface (Version: 7.0.20)
2025-07-27 05:09:57 (1274264): Successfully copied 'init_data.xml' to the shared directory.
2025-07-27 05:09:57 (1274264): Create VM. (boinc_aac776e8f0c70310, slot#15)
2025-07-27 05:09:57 (1274264): Setting Memory Size for VM. (4096MB)
2025-07-27 05:09:57 (1274264): Setting CPU Count for VM. (1)
2025-07-27 05:09:57 (1274264): Setting Chipset Options for VM.
2025-07-27 05:09:58 (1274264): Setting Graphics Controller Options for VM.
2025-07-27 05:09:58 (1274264): Setting Boot Options for VM.
2025-07-27 05:09:58 (1274264): Setting Network Configuration for NAT.
2025-07-27 05:09:58 (1274264): Enabling VM Network Access.
2025-07-27 05:09:58 (1274264): Disabling USB Support for VM.
2025-07-27 05:09:58 (1274264): Disabling COM Port Support for VM.
2025-07-27 05:09:58 (1274264): Disabling LPT Port Support for VM.
2025-07-27 05:09:58 (1274264): Disabling Audio Support for VM.
2025-07-27 05:09:58 (1274264): Disabling Clipboard Support for VM.
2025-07-27 05:09:58 (1274264): Disabling Drag and Drop Support for VM.
2025-07-27 05:09:59 (1274264): Adding storage controller(s) to VM.
2025-07-27 05:09:59 (1274264): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-27 05:09:59 (1274264): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-27 05:09:59 (1274264): forwarding host port 53179 to guest port 80
2025-07-27 05:09:59 (1274264): Enabling remote desktop for VM.
2025-07-27 05:09:59 (1274264): Enabling shared directory for VM.
2025-07-27 05:10:00 (1274264): Starting VM using VBoxManage interface. (boinc_aac776e8f0c70310, slot#15)
2025-07-27 05:10:01 (1274264): Successfully started VM. (PID = '1274652')
2025-07-27 05:10:01 (1274264): Reporting VM Process ID to BOINC.
2025-07-27 05:10:01 (1274264): Guest Log: BIOS: VirtualBox 7.0.20
2025-07-27 05:10:01 (1274264): Guest Log: CPUID EDX: 0x178bfbff
2025-07-27 05:10:01 (1274264): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-27 05:10:01 (1274264): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-27 05:10:01 (1274264): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-27 05:10:01 (1274264): Detected: Web Application Enabled (http://localhost:53179)
2025-07-27 05:10:01 (1274264): Detected: Remote Desktop Enabled (localhost:56543)
2025-07-27 05:10:01 (1274264): Preference change detected
2025-07-27 05:10:01 (1274264): Setting CPU throttle for VM. (100%)
2025-07-27 05:10:01 (1274264): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-27 05:10:03 (1274264): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-27 05:10:03 (1274264): Guest Log: BIOS: Booting from Hard Disk...
2025-07-27 05:10:06 (1274264): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-27 05:10:06 (1274264): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-27 05:10:06 (1274264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-27 05:10:06 (1274264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-27 05:10:06 (1274264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-27 05:10:06 (1274264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-27 05:10:06 (1274264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-27 05:10:06 (1274264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-27 05:10:06 (1274264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-27 05:10:06 (1274264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-27 05:10:06 (1274264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-27 05:10:06 (1274264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-27 05:10:06 (1274264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-27 05:10:06 (1274264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-27 05:10:06 (1274264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-27 05:10:06 (1274264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-27 05:10:06 (1274264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-27 05:10:06 (1274264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-27 05:10:06 (1274264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-27 05:10:06 (1274264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-27 05:10:06 (1274264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-27 05:10:06 (1274264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-27 05:10:06 (1274264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-27 05:10:06 (1274264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-27 05:10:06 (1274264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-27 05:10:06 (1274264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-27 05:10:06 (1274264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-27 05:10:06 (1274264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-27 05:10:06 (1274264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-27 05:10:06 (1274264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-27 05:10:06 (1274264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-27 05:10:06 (1274264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-27 05:10:12 (1274264): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-27 05:10:12 (1274264): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-27 05:10:23 (1274264): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-27 05:10:23 (1274264): Guest Log: 00:00:00.000241 main     Log opened 2025-07-27T03:10:22.152517000Z
2025-07-27 05:10:23 (1274264): Guest Log: 00:00:00.000444 main     OS Product: Linux
2025-07-27 05:10:23 (1274264): Guest Log: 00:00:00.000522 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-27 05:10:23 (1274264): Guest Log: 00:00:00.000590 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-27 05:10:23 (1274264): Guest Log: 00:00:00.000656 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-27 05:10:23 (1274264): Guest Log: 00:00:00.000657 main     Process ID: 1236
2025-07-27 05:10:23 (1274264): Guest Log: 00:00:00.000658 main     Package type: LINUX_64BITS_GENERIC
2025-07-27 05:10:23 (1274264): Guest Log: 00:00:00.003117 main     5.2.32 r132073 started. Verbose level = 0
2025-07-27 05:10:24 (1274264): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-27 05:10:24 (1274264): Guest Log: [INFO] Mounting shared directory
2025-07-27 05:10:24 (1274264): Guest Log: [INFO] Checking for init_data.xml
2025-07-27 05:10:27 (1274264): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-27 05:10:27 (1274264): Guest Log: [INFO] Detected branch: prod
2025-07-27 05:10:27 (1274264): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-27 05:10:27 (1274264): Guest Log: Copying input files
2025-07-27 05:10:29 (1274264): Guest Log: Copied input files into RunAtlas.
2025-07-27 05:10:29 (1274264): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2025-07-27 05:10:39 (1274264): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-27 05:10:39 (1274264): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-27 05:10:39 (1274264): Guest Log: 2.6.3.0 1504 0 31536 148797 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2025-07-27 05:10:40 (1274264): Guest Log: copied the webapp to /var/www
2025-07-27 05:10:40 (1274264): Guest Log: core_number=1
2025-07-27 05:10:40 (1274264): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-27 05:10:40 (1274264): Guest Log:  *** Starting ATLAS job. (PandaID=6745835037 taskID=45743349) ***
2025-07-27 06:49:01 (1274264): Status Report: Elapsed Time: '6000.000000'
2025-07-27 06:49:01 (1274264): Status Report: CPU Time: '5903.100000'
2025-07-27 08:28:02 (1274264): Status Report: Elapsed Time: '12000.000000'
2025-07-27 08:28:02 (1274264): Status Report: CPU Time: '11846.750000'
2025-07-27 10:07:03 (1274264): Status Report: Elapsed Time: '18000.000000'
2025-07-27 10:07:03 (1274264): Status Report: CPU Time: '17789.990000'
2025-07-27 11:46:03 (1274264): Status Report: Elapsed Time: '24000.000000'
2025-07-27 11:46:03 (1274264): Status Report: CPU Time: '23733.670000'
2025-07-27 13:25:04 (1274264): Status Report: Elapsed Time: '30000.000000'
2025-07-27 13:25:04 (1274264): Status Report: CPU Time: '29677.870000'
2025-07-27 15:04:04 (1274264): Status Report: Elapsed Time: '36000.000000'
2025-07-27 15:04:04 (1274264): Status Report: CPU Time: '35621.860000'
2025-07-27 16:43:05 (1274264): Status Report: Elapsed Time: '42000.000000'
2025-07-27 16:43:05 (1274264): Status Report: CPU Time: '41565.730000'
2025-07-27 16:58:02 (1274264): Guest Log:  *** Job finished ***
2025-07-27 16:58:02 (1274264): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-27 16:58:02 (1274264): Guest Log: 2025-07-27 14:57:43,375 | INFO     | all workflow threads have been joined
2025-07-27 16:58:02 (1274264): Guest Log: 2025-07-27 14:57:43,376 | INFO     | end of generic workflow (traces error code: 0)
2025-07-27 16:58:02 (1274264): Guest Log: 2025-07-27 14:57:43,376 | INFO     | traces error code: 0
2025-07-27 16:58:02 (1274264): Guest Log: 2025-07-27 14:57:43,376 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-27 16:58:02 (1274264): Guest Log: 2025-07-27 14:58:01,386 | INFO     | PID=5753 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-07-27 16:58:02 (1274264): Guest Log: 2025-07-27 14:58:01,387 | INFO     | found 0 job(s) in 20 queues
2025-07-27 16:58:02 (1274264): Guest Log: 2025-07-27 14:58:01,387 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-07-27 16:58:02 (1274264): Guest Log: 2025-07-27 14:58:01,388 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-07-27 16:58:02 (1274264): Guest Log: 2025-07-27 14:58:01,388 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-27 16:58:02 (1274264): Guest Log: 2025-07-27 14:58:01,388 | INFO     | [monitor] control thread has ended
2025-07-27 16:58:02 (1274264): Guest Log: 2025-07-27 14:58:01,594 [wrapper] ==== pilot stdout END ====
2025-07-27 16:58:02 (1274264): Guest Log: 2025-07-27 14:58:01,605 [wrapper] ==== wrapper stdout RESUME ====
2025-07-27 16:58:02 (1274264): Guest Log: 2025-07-27 14:58:01,611 [wrapper] pilotpid: 5753
2025-07-27 16:58:02 (1274264): Guest Log: 2025-07-27 14:58:01,616 [wrapper] Pilot exit status: 0
2025-07-27 16:58:02 (1274264): Guest Log: 2025-07-27 14:58:01,666 [wrapper] pandaids: 6745835037
2025-07-27 16:58:02 (1274264): Guest Log: 2025-07-27 14:58:01,703 [wrapper] cleanup supervisor_pilot 27099 5754
2025-07-27 16:58:02 (1274264): Guest Log: 2025-07-27 14:58:01,708 [wrapper] Test setup, not cleaning
2025-07-27 16:58:02 (1274264): Guest Log: 2025-07-27 14:58:01,714 [wrapper] apfmon messages muted
2025-07-27 16:58:02 (1274264): Guest Log: 2025-07-27 14:58:01,719 [wrapper] ==== wrapper stdout END ====
2025-07-27 16:58:02 (1274264): Guest Log: 2025-07-27 14:58:01,724 [wrapper] ==== wrapper stderr END ====
2025-07-27 16:58:02 (1274264): Guest Log:  *** Error codes and diagnostics ***
2025-07-27 16:58:02 (1274264): Guest Log:     "exeErrorCode": 0,
2025-07-27 16:58:02 (1274264): Guest Log:     "exeErrorDiag": "",
2025-07-27 16:58:02 (1274264): Guest Log:     "pilotErrorCode": 0,
2025-07-27 16:58:02 (1274264): Guest Log:     "pilotErrorDiag": "",
2025-07-27 16:58:02 (1274264): Guest Log:  *** Listing of results directory ***
2025-07-27 16:58:02 (1274264): Guest Log: total 220012
2025-07-27 16:58:02 (1274264): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 26 21:42 pilot3.tar.gz
2025-07-27 16:58:02 (1274264): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 26 22:10 runpilot2-wrapper.sh
2025-07-27 16:58:02 (1274264): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 26 22:10 queuedata.json
2025-07-27 16:58:02 (1274264): Guest Log: -rw-r--r--. 1 atlas atlas      9914 Jul 27 03:10 init_data.xml
2025-07-27 16:58:02 (1274264): Guest Log: -rw-r--r--. 1 atlas atlas    542892 Jul 27 03:10 input.tar.gz
2025-07-27 16:58:02 (1274264): Guest Log: -rw-r--r--. 1 atlas atlas     15095 Jul 27 03:10 start_atlas.sh
2025-07-27 16:58:02 (1274264): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 27 03:10 EVNT.45743347._002524.pool.root.1 -> /data/./ATLAS.root_0
2025-07-27 16:58:02 (1274264): Guest Log: -rw-r--r--. 1 atlas atlas      2563 Jul 27 03:10 pandaJob.out
2025-07-27 16:58:02 (1274264): Guest Log: -rw-------. 1 atlas atlas    980117 Jul 27 03:11 agis_schedconf.cvmfs.json
2025-07-27 16:58:02 (1274264): Guest Log: drwx------. 4 atlas atlas      4096 Jul 27 03:11 pilot3
2025-07-27 16:58:02 (1274264): Guest Log: -rw-------. 1 atlas atlas 213066635 Jul 27 14:56 HITS.45743349._045245.pool.root.1
2025-07-27 16:58:02 (1274264): Guest Log: -rw-------. 1 atlas atlas      1022 Jul 27 14:57 memory_monitor_summary.json
2025-07-27 16:58:02 (1274264): Guest Log: -rw-------. 1 atlas atlas   1593052 Jul 27 14:57 agis_ddmendpoints.agis.ALL.json
2025-07-27 16:58:02 (1274264): Guest Log: -rw-------. 1 atlas atlas    536289 Jul 27 14:57 log.45743349._045245.job.log.tgz.1
2025-07-27 16:58:02 (1274264): Guest Log: -rw-------. 1 atlas atlas      7805 Jul 27 14:57 heartbeat.json
2025-07-27 16:58:02 (1274264): Guest Log: -rw-------. 1 atlas atlas       744 Jul 27 14:58 pilotlog.txt
2025-07-27 16:58:02 (1274264): Guest Log: -rw-------. 1 atlas atlas        95 Jul 27 14:58 pilot_heartbeat.json
2025-07-27 16:58:02 (1274264): Guest Log: -rw-------. 1 atlas atlas   3669560 Jul 27 14:58 log.45743349._045245.job.log.1
2025-07-27 16:58:02 (1274264): Guest Log: -rw-------. 1 atlas atlas       357 Jul 27 14:58 output.list
2025-07-27 16:58:02 (1274264): Guest Log: -rw-------. 1 atlas atlas       657 Jul 27 14:58 XIUKDmPH2z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTJTLDm1fBIrm.diag
2025-07-27 16:58:02 (1274264): Guest Log: -rw-r--r--. 1 atlas atlas      8473 Jul 27 14:58 runtime_log.err
2025-07-27 16:58:02 (1274264): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 27 14:58 runtime_log
2025-07-27 16:58:02 (1274264): Guest Log: -rw-------. 1 atlas atlas   4229120 Jul 27 14:58 result.tar.gz
2025-07-27 16:58:02 (1274264): Guest Log: Looking for outputfile HITS.45743349._045245.pool.root.1
2025-07-27 16:58:02 (1274264): Guest Log: HITS file was successfully produced
2025-07-27 16:58:02 (1274264): Guest Log: -rw-------. 1 atlas atlas 213066635 Jul 27 14:56 /home/atlas/RunAtlas/HITS.45743349._045245.pool.root.1
2025-07-27 16:58:02 (1274264): Guest Log: Successfully finished the ATLAS job!
2025-07-27 16:58:02 (1274264): Guest Log: Copying the results back to the shared directory!
2025-07-27 16:58:02 (1274264): Guest Log:  *** Contents of shared directory: ***
2025-07-27 16:58:02 (1274264): Guest Log: total 147984
2025-07-27 16:58:03 (1274264): Guest Log: -rw-r--r--. 1 root root 146725196 Jul 27 03:09 ATLAS.root_0
2025-07-27 16:58:03 (1274264): Guest Log: -rw-r--r--. 1 root root      9914 Jul 27 03:09 init_data.xml
2025-07-27 16:58:03 (1274264): Guest Log: -rw-r--r--. 1 root root    542892 Jul 27 03:09 input.tar.gz
2025-07-27 16:58:03 (1274264): Guest Log: -rw-r--r--. 1 root root   4229120 Jul 27 14:58 result.tar.gz
2025-07-27 16:58:03 (1274264): Guest Log: -rw-r--r--. 1 root root     15095 Jul 27 03:09 start_atlas.sh
2025-07-27 16:58:03 (1274264): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-27 16:58:03 (1274264): VM Completion File Detected.
2025-07-27 16:58:03 (1274264): Powering off VM.
2025-07-27 16:58:04 (1274264): Successfully stopped VM.
2025-07-27 16:58:04 (1274264): Deregistering VM. (boinc_aac776e8f0c70310, slot#15)
2025-07-27 16:58:04 (1274264): Removing network bandwidth throttle group from VM.
2025-07-27 16:58:04 (1274264): Removing VM from VirtualBox.
16:58:09 (1274264): called boinc_finish(0)

</stderr_txt>
]]>

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