Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:23:12 (534116): wrapper (7.7.26015): starting
20:23:12 (534116): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 20:23:12] Arguments: --nthreads 12
[2025-07-26 20:23:12] Threads: 12
[2025-07-26 20:23:12] Checking for CVMFS
[2025-07-26 20:23:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 20:23:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 20:23:12] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 20:23:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 20:23:12] 2.11.5.0 7126 36596 172964 148797 1 370 34607305 45568001 6489 130560 0 288727214 99.756 209051395 23333 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-07-26 20:23:12] CVMFS is ok
[2025-07-26 20:23:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 20:23:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 20:23:12] Further information can be found at the LHC@home message board.
[2025-07-26 20:23:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 20:23:12] Checking for apptainer binary...
[2025-07-26 20:23:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 20:23:12] Running /usr/bin/apptainer --version
[2025-07-26 20:23:12] apptainer version 1.4.1-1.el9
[2025-07-26 20:23:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 20:23:13] wns0039.triumf.lcg
[2025-07-26 20:23:13] apptainer works
[2025-07-26 20:23:13] Set ATHENA_PROC_NUMBER=12
[2025-07-26 20:23:13] Set ATHENA_CORE_NUMBER=12
[2025-07-26 20:23:13] Starting ATLAS job with PandaID=6745919388
[2025-07-26 20:23:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 20:26:17]  *** The last 200 lines of the pilot log: ***
[2025-07-26 20:26:17] 2025-07-27 03:26:03,378 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 20:26:17] 2025-07-27 03:26:03,378 | WARNING  | found no stored workdir sizes
[2025-07-26 20:26:17] 2025-07-27 03:26:03,378 | INFO     | will not add max space = 0 B to job metrics
[2025-07-26 20:26:17] 2025-07-27 03:26:03,378 | WARNING  | wrong length of table data, x=[1753586627.0], y=[1322.0] (must be same and length>=4)
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | could have reported an average CPU frequency of 2624 MHz (4 samples)
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | ..............................
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | . Timing measurements:
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | . get job = 0 s
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | . initial setup = 7 s
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | . payload setup = 4 s
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | . stage-in = 0 s
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | . payload execution = 14 s
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | . stage-out = 0 s
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | . log creation = 0 s
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | ..............................
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745919388/pilotlog.txt
[2025-07-26 20:26:17] 2025-07-27 03:26:03,389 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-26 20:26:17] - Log from pilotlog.txt -
[2025-07-26 20:26:17] 2025-07-27 03:26:03,377 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 20:26:17] 2025-07-27 03:26:03,377 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 20:26:17] 2025-07-27 03:26:03,378 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 20:26:17] 2025-07-27 03:26:03,378 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 20:26:17] 2025-07-27 03:26:03,378 | WARNING  | found no stored workdir sizes
[2025-07-26 20:26:17] 2025-07-27 03:26:03,378 | INFO     | will not add max space = 0 B to job metrics
[2025-07-26 20:26:17] 2025-07-27 03:26:03,378 | WARNING  | wrong length of table data, x=[1753586627.0], y=[1322.0] (must be same and length>=4)
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | could have reported an average CPU frequency of 2624 MHz (4 samples)
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | ..............................
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | . Timing measurements:
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | . get job = 0 s
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | . initial setup = 7 s
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | . payload setup = 4 s
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | . stage-in = 0 s
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | . payload execution = 14 s
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | . stage-out = 0 s
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | . log creation = 0 s
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | ..............................
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745919388/pilotlog.txt
[2025-07-26 20:26:17] 2025-07-27 03:26:03,389 | WARNING  | 
[2025-07-26 20:26:17] [begin log extracts]
[2025-07-26 20:26:17] - Log from pilotlog.txt -
[2025-07-26 20:26:17] 2025-07-27 03:26:03,377 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 20:26:17] 2025-07-27 03:26:03,377 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 20:26:17] 2025-07-27 03:26:03,378 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 20:26:17] 2025-07-27 03:26:03,378 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 20:26:17] 2025-07-27 03:26:03,378 | WARNING  | found no stored workdir sizes
[2025-07-26 20:26:17] 2025-07-27 03:26:03,378 | INFO     | will not add max space = 0 B to job metrics
[2025-07-26 20:26:17] 2025-07-27 03:26:03,378 | WARNING  | wrong length of table data, x=[1753586627.0], y=[1322.0] (must be same and length>=4)
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | could have reported an average CPU frequency of 2624 MHz (4 samples)
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | ..............................
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | . Timing measurements:
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | . get job = 0 s
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | . initial setup = 7 s
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | . payload setup = 4 s
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | . stage-in = 0 s
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | . payload execution = 14 s
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | . stage-out = 0 s
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | . log creation = 0 s
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | ..............................
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-26 20:26:17] 2025-07-27 03:26:03,379 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745919388/pilotlog.txt
[2025-07-26 20:26:17] [end log extracts]
[2025-07-26 20:26:17] 2025-07-27 03:26:03,390 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-26 20:26:17] 2025-07-27 03:26:03,391 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-26 20:26:17] 2025-07-27 03:26:03,450 | INFO     | 
[2025-07-26 20:26:17] 2025-07-27 03:26:03,450 | INFO     | job summary report
[2025-07-26 20:26:17] 2025-07-27 03:26:03,450 | INFO     | --------------------------------------------------
[2025-07-26 20:26:17] 2025-07-27 03:26:03,450 | INFO     | PanDA job id: 6745919388
[2025-07-26 20:26:17] 2025-07-27 03:26:03,450 | INFO     | task id: 45759065
[2025-07-26 20:26:17] 2025-07-27 03:26:03,450 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-26 20:23:54,168 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-26 20:26:17] 2025-07-27 03:26:03,450 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 20:26:17] 2025-07-27 03:26:03,450 | INFO     | pilot state: failed 
[2025-07-26 20:26:17] 2025-07-27 03:26:03,450 | INFO     | transexitcode: 65
[2025-07-26 20:26:17] 2025-07-27 03:26:03,450 | INFO     | exeerrorcode: 65
[2025-07-26 20:26:17] 2025-07-27 03:26:03,450 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-26 20:26:17] 2025-07-27 03:26:03,450 | INFO     | exitcode: 65
[2025-07-26 20:26:17] 2025-07-27 03:26:03,450 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-26 20:26:17] 2025-07-27 03:26:03,450 | INFO     | cpuconsumptiontime: 15 s
[2025-07-26 20:26:17] 2025-07-27 03:26:03,450 | INFO     | nevents: 0
[2025-07-26 20:26:17] 2025-07-27 03:26:03,450 | INFO     | neventsw: 0
[2025-07-26 20:26:17] 2025-07-27 03:26:03,450 | INFO     | pid: 544098
[2025-07-26 20:26:17] 2025-07-27 03:26:03,451 | INFO     | pgrp: 544098
[2025-07-26 20:26:17] 2025-07-27 03:26:03,451 | INFO     | corecount: 12
[2025-07-26 20:26:17] 2025-07-27 03:26:03,451 | INFO     | event service: False
[2025-07-26 20:26:17] 2025-07-27 03:26:03,451 | INFO     | sizes: {0: 2397293, 1: 2397492, 4: 2397754, 11: 2397782, 21: 2421087, 22: 2421063, 23: 2425511, 24: 2425539, 143: 2425705}
[2025-07-26 20:26:17] 2025-07-27 03:26:03,451 | INFO     | --------------------------------------------------
[2025-07-26 20:26:17] 2025-07-27 03:26:03,451 | INFO     | 
[2025-07-26 20:26:17] 2025-07-27 03:26:03,451 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-26 20:26:17] 2025-07-27 03:26:03,465 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 20:26:17] 2025-07-27 03:26:03,466 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 20:26:17] 2025-07-27 03:26:03,466 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 20:26:17] 2025-07-27 03:26:03,466 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 20:26:17] 2025-07-27 03:26:03,466 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 20:26:17] 2025-07-27 03:26:03,466 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 20:26:17] 2025-07-27 03:26:03,466 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 20:26:17] 2025-07-27 03:26:03,466 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 20:26:17] 2025-07-27 03:26:03,466 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 20:26:17] 2025-07-27 03:26:03,466 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 20:26:17] 2025-07-27 03:26:03,466 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 20:26:17] 2025-07-27 03:26:03,466 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 20:26:17] 2025-07-27 03:26:03,466 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 20:26:17] 2025-07-27 03:26:03,466 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 20:26:17] 2025-07-27 03:26:03,466 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 20:26:17] 2025-07-27 03:26:03,466 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 20:26:17] 2025-07-27 03:26:03,467 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 20:26:17] 2025-07-27 03:26:03,467 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 20:26:17] 2025-07-27 03:26:03,467 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 20:26:17] 2025-07-27 03:26:03,467 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 20:26:17] 2025-07-27 03:26:03,467 | INFO     | job 6745919388 has completed (purged errors)
[2025-07-26 20:26:17] 2025-07-27 03:26:03,467 | INFO     | overall cleanup function is called
[2025-07-26 20:26:17] 2025-07-27 03:26:04,473 | INFO     | --- collectZombieJob: --- 10, [544098]
[2025-07-26 20:26:17] 2025-07-27 03:26:04,473 | INFO     | zombie collector waiting for pid 544098
[2025-07-26 20:26:17] 2025-07-27 03:26:04,473 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 20:26:17] 2025-07-27 03:26:04,473 | INFO     | collected zombie processes
[2025-07-26 20:26:17] 2025-07-27 03:26:04,473 | INFO     | will attempt to kill all subprocesses of pid=544098
[2025-07-26 20:26:17] 2025-07-27 03:26:04,599 | INFO     | process IDs to be killed: [544098] (in reverse order)
[2025-07-26 20:26:17] 2025-07-27 03:26:04,648 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 20:26:17] 2025-07-27 03:26:04,648 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 20:26:17] 2025-07-27 03:26:04,653 | INFO     | did not find any defunct processes belonging to 544098
[2025-07-26 20:26:17] 2025-07-27 03:26:04,657 | INFO     | did not find any defunct processes belonging to 544098
[2025-07-26 20:26:17] 2025-07-27 03:26:04,658 | INFO     | ready for new job
[2025-07-26 20:26:17] 2025-07-27 03:26:04,658 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 20:26:17] 2025-07-27 03:26:04,659 | INFO     | ***************************************
[2025-07-26 20:26:17] 2025-07-27 03:26:04,659 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 20:26:17] 2025-07-27 03:26:04,659 | INFO     | ***************************************
[2025-07-26 20:26:17] 2025-07-27 03:26:04,660 | INFO     | 
[2025-07-26 20:26:17] 2025-07-27 03:26:04,661 | INFO     | architecture information:
[2025-07-26 20:26:17] 2025-07-27 03:26:04,662 | INFO     | executing command: cat /etc/os-release
[2025-07-26 20:26:17] 2025-07-27 03:26:04,672 | INFO     | cat /etc/os-release:
[2025-07-26 20:26:17] NAME="CentOS Linux"
[2025-07-26 20:26:17] VERSION="7 (Core)"
[2025-07-26 20:26:17] ID="centos"
[2025-07-26 20:26:17] ID_LIKE="rhel fedora"
[2025-07-26 20:26:17] VERSION_ID="7"
[2025-07-26 20:26:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 20:26:17] ANSI_COLOR="0;31"
[2025-07-26 20:26:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 20:26:17] HOME_URL="https://www.centos.org/"
[2025-07-26 20:26:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 20:26:17] 
[2025-07-26 20:26:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 20:26:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 20:26:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 20:26:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 20:26:17] 
[2025-07-26 20:26:17] 2025-07-27 03:26:04,673 | INFO     | ***************************************
[2025-07-26 20:26:17] 2025-07-27 03:26:05,176 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-26 20:26:17] 2025-07-27 03:26:05,187 | INFO     | sufficient remaining disk space (2194694733824 B)
[2025-07-26 20:26:17] 2025-07-27 03:26:05,188 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 20:26:17] 2025-07-27 03:26:05,188 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 20:26:17] 2025-07-27 03:26:05,188 | INFO     | update_server=False
[2025-07-26 20:26:17] 2025-07-27 03:26:05,188 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 20:26:17] 2025-07-27 03:26:05,188 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-26 20:26:17] 2025-07-27 03:26:05,189 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 20:26:17] 2025-07-27 03:26:05,189 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 20:26:17] 2025-07-27 03:26:05,189 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 20:26:17] 2025-07-27 03:26:05,189 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 20:26:17] 2025-07-27 03:26:05,398 | INFO     | all payload control threads have been joined
[2025-07-26 20:26:17] 2025-07-27 03:26:05,661 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-26 20:26:17] 2025-07-27 03:26:05,661 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-26 20:26:17] 2025-07-27 03:26:05,661 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 20:26:17] 2025-07-27 03:26:05,661 | INFO     | will abort loop
[2025-07-26 20:26:17] 2025-07-27 03:26:05,716 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 20:26:17] 2025-07-27 03:26:05,915 | INFO     | all data control threads have been joined
[2025-07-26 20:26:17] 2025-07-27 03:26:06,193 | INFO     | [job] retrieve thread has finished
[2025-07-26 20:26:17] 2025-07-27 03:26:06,194 | INFO     | [job] queue monitor thread has finished
[2025-07-26 20:26:17] 2025-07-27 03:26:06,272 | INFO     | all job control threads have been joined
[2025-07-26 20:26:17] 2025-07-27 03:26:06,403 | INFO     | [payload] control thread has finished
[2025-07-26 20:26:17] 2025-07-27 03:26:06,666 | INFO     | [job] job monitor thread has finished
[2025-07-26 20:26:17] 2025-07-27 03:26:06,755 | INFO     | [job] validate thread has finished
[2025-07-26 20:26:17] 2025-07-27 03:26:06,900 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 20:26:17] 2025-07-27 03:26:06,920 | INFO     | [data] control thread has finished
[2025-07-26 20:26:17] 2025-07-27 03:26:06,940 | INFO     | [data] copytool_in thread has finished
[2025-07-26 20:26:17] 2025-07-27 03:26:07,001 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 20:26:17] 2025-07-27 03:26:07,081 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 20:26:17] 2025-07-27 03:26:07,122 | INFO     | [payload] validate_post thread has finished
[2025-07-26 20:26:17] 2025-07-27 03:26:07,277 | INFO     | [job] control thread has finished
[2025-07-26 20:26:17] 2025-07-27 03:26:07,468 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 20:26:17] 2025-07-27 03:26:07,564 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 20:26:17] 2025-07-27 03:26:07,669 | INFO     | [payload] failed_post thread has finished
[2025-07-26 20:26:17] 2025-07-27 03:26:07,721 | INFO     | [data] copytool_out thread has finished
[2025-07-26 20:26:17] 2025-07-27 03:26:11,474 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 20:26:17] 2025-07-27 03:26:12,609 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140616779753280)>', '<ExcThread(monitor, started 140616381998848)>']
[2025-07-26 20:26:17] 2025-07-27 03:26:13,229 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 20:26:17] 2025-07-27 03:26:13,229 | INFO     | [monitor] control thread has ended
[2025-07-26 20:26:17] 2025-07-27 03:26:17,630 | INFO     | all workflow threads have been joined
[2025-07-26 20:26:17] 2025-07-27 03:26:17,630 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 20:26:17] 2025-07-27 03:26:17,630 | INFO     | traces error code: 0
[2025-07-26 20:26:17] 2025-07-27 03:26:17,631 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 20:26:17] 2025-07-27 03:26:17,756 [wrapper] ==== pilot stdout END ====
[2025-07-26 20:26:17] 2025-07-27 03:26:17,758 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 20:26:17] 2025-07-27 03:26:17,760 [wrapper] pilotpid: 537720
[2025-07-26 20:26:17] 2025-07-27 03:26:17,762 [wrapper] Pilot exit status: 0
[2025-07-26 20:26:17] 2025-07-27 03:26:17,769 [wrapper] pandaids: 6745919388
[2025-07-26 20:26:17] 2025-07-27 03:26:17,801 [wrapper] cleanup supervisor_pilot  537726 537721
[2025-07-26 20:26:17] 2025-07-27 03:26:17,804 [wrapper] Test setup, not cleaning
[2025-07-26 20:26:17] 2025-07-27 03:26:17,806 [wrapper] apfmon messages muted
[2025-07-26 20:26:17] 2025-07-27 03:26:17,807 [wrapper] ==== wrapper stdout END ====
[2025-07-26 20:26:17] 2025-07-27 03:26:17,809 [wrapper] ==== wrapper stderr END ====
[2025-07-26 20:26:17]  *** Error codes and diagnostics ***
[2025-07-26 20:26:17]     "exeErrorCode": 65,
[2025-07-26 20:26:17]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-26 20:26:17]     "pilotErrorCode": 1305,
[2025-07-26 20:26:17]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-26 20:26:17]  *** Listing of results directory ***
[2025-07-26 20:26:17] total 235052
[2025-07-26 20:26:17] -rw-r--r--. 1 boinc boinc    530466 Jul 26 17:36 pilot3.tar.gz
[2025-07-26 20:26:17] -rw-r--r--. 1 boinc boinc      5112 Jul 26 17:41 queuedata.json
[2025-07-26 20:26:17] -rwx------. 1 boinc boinc     36292 Jul 26 17:42 runpilot2-wrapper.sh
[2025-07-26 20:26:17] -rw-r--r--. 1 boinc boinc       100 Jul 26 20:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 20:26:17] -rwxr-xr-x. 1 boinc boinc      7986 Jul 26 20:23 run_atlas
[2025-07-26 20:26:17] -rw-r--r--. 1 boinc boinc       105 Jul 26 20:23 job.xml
[2025-07-26 20:26:17] -rw-r--r--. 2 boinc boinc 236620615 Jul 26 20:23 EVNT.45759062._000005.pool.root.1
[2025-07-26 20:26:17] -rw-r--r--. 2 boinc boinc     15095 Jul 26 20:23 start_atlas.sh
[2025-07-26 20:26:17] drwxrwx--x. 2 boinc boinc      4096 Jul 26 20:23 shared
[2025-07-26 20:26:17] -rw-r--r--. 2 boinc boinc    542881 Jul 26 20:23 input.tar.gz
[2025-07-26 20:26:17] -rw-r--r--. 1 boinc boinc      6596 Jul 26 20:23 init_data.xml
[2025-07-26 20:26:17] -rw-r--r--. 1 boinc boinc         0 Jul 26 20:23 boinc_lockfile
[2025-07-26 20:26:17] -rw-r--r--. 1 boinc boinc      2558 Jul 26 20:23 pandaJob.out
[2025-07-26 20:26:17] -rw-------. 1 boinc boinc    980117 Jul 26 20:23 agis_schedconf.cvmfs.json
[2025-07-26 20:26:17] -rw-------. 1 boinc boinc   1593052 Jul 26 20:23 agis_ddmendpoints.agis.ALL.json
[2025-07-26 20:26:17] drwx------. 4 boinc boinc      4096 Jul 26 20:23 pilot3
[2025-07-26 20:26:17] -rw-r--r--. 1 boinc boinc       522 Jul 26 20:23 boinc_task_state.xml
[2025-07-26 20:26:17] -rw-------. 1 boinc boinc       978 Jul 26 20:23 memory_monitor_summary.json
[2025-07-26 20:26:17] -rw-------. 1 boinc boinc     20280 Jul 26 20:24 log.45759065._000119.job.log.tgz.1
[2025-07-26 20:26:17] -rw-------. 1 boinc boinc        95 Jul 26 20:25 pilot_heartbeat.json
[2025-07-26 20:26:17] -rw-------. 1 boinc boinc      8421 Jul 26 20:26 heartbeat.json
[2025-07-26 20:26:17] -rw-r--r--. 1 boinc boinc      8192 Jul 26 20:26 boinc_mmap_file
[2025-07-26 20:26:17] -rw-r--r--. 1 boinc boinc        22 Jul 26 20:26 wrapper_checkpoint.txt
[2025-07-26 20:26:17] -rw-------. 1 boinc boinc      4665 Jul 26 20:26 pilotlog.txt
[2025-07-26 20:26:17] -rw-------. 1 boinc boinc     74173 Jul 26 20:26 log.45759065._000119.job.log.1
[2025-07-26 20:26:17] -rw-------. 1 boinc boinc       188 Jul 26 20:26 output.list
[2025-07-26 20:26:17] -rw-r--r--. 1 boinc boinc       620 Jul 26 20:26 runtime_log
[2025-07-26 20:26:17] -rw-------. 1 boinc boinc    112640 Jul 26 20:26 result.tar.gz
[2025-07-26 20:26:17] -rw-r--r--. 1 boinc boinc      8485 Jul 26 20:26 runtime_log.err
[2025-07-26 20:26:17] -rw-------. 1 boinc boinc       644 Jul 26 20:26 kUIMDmxd4z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmagTLDmYblOUn.diag
[2025-07-26 20:26:17] -rw-r--r--. 1 boinc boinc     21606 Jul 26 20:26 stderr.txt
[2025-07-26 20:26:17] No HITS result produced
[2025-07-26 20:26:17]  *** Contents of shared directory: ***
[2025-07-26 20:26:17] total 231740
[2025-07-26 20:26:17] -rw-r--r--. 2 boinc boinc 236620615 Jul 26 20:23 ATLAS.root_0
[2025-07-26 20:26:17] -rw-r--r--. 2 boinc boinc     15095 Jul 26 20:23 start_atlas.sh
[2025-07-26 20:26:17] -rw-r--r--. 2 boinc boinc    542881 Jul 26 20:23 input.tar.gz
[2025-07-26 20:26:17] -rw-------. 1 boinc boinc    112640 Jul 26 20:26 result.tar.gz
20:26:19 (534116): run_atlas exited; CPU time 17.864450
20:26:19 (534116): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN