Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:20:15 (28357): wrapper (7.7.26015): starting
23:20:15 (28357): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 23:20:15] Arguments: --nthreads 8
[2025-07-26 23:20:15] Threads: 8
[2025-07-26 23:20:15] Checking for CVMFS
[2025-07-26 23:20:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 23:20:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 23:20:15] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 23:20:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 23:20:16] 2.11.2.0 2991 111454 83492 148799 0 56 15889736 20275201 1 130560 0 27839280 99.961 9238799 10664 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 23:20:16] CVMFS is ok
[2025-07-26 23:20:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 23:20:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 23:20:16] Further information can be found at the LHC@home message board.
[2025-07-26 23:20:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 23:20:16] Checking for apptainer binary...
[2025-07-26 23:20:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 23:20:16] Running /usr/bin/apptainer --version
[2025-07-26 23:20:16] apptainer version 1.3.2-1.el7
[2025-07-26 23:20:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 23:20:17] c-115-15.aglt2.org
[2025-07-26 23:20:17] apptainer works
[2025-07-26 23:20:17] Set ATHENA_PROC_NUMBER=8
[2025-07-26 23:20:17] Set ATHENA_CORE_NUMBER=8
[2025-07-26 23:20:17] Starting ATLAS job with PandaID=6745016216
[2025-07-26 23:20:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 01:29:42]  *** The last 200 lines of the pilot log: ***
[2025-07-27 01:29:42] 2025-07-27 05:29:09,936 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 01:29:42] 2025-07-27 05:29:09,937 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 01:29:42] 2025-07-27 05:29:09,937 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 01:29:42] 2025-07-27 05:29:09,941 | INFO     | fitting pss+swap vs Time
[2025-07-27 01:29:42] 2025-07-27 05:29:09,941 | INFO     | sum of square deviations: 620244187.5
[2025-07-27 01:29:42] 2025-07-27 05:29:09,942 | INFO     | sum of deviations: -7626035170.0
[2025-07-27 01:29:42] 2025-07-27 05:29:09,942 | INFO     | mean x: 1753590278.5
[2025-07-27 01:29:42] 2025-07-27 05:29:09,943 | INFO     | mean y: 2577276.365079365
[2025-07-27 01:29:42] 2025-07-27 05:29:09,943 | INFO     | -- intersect: 21563345449.804985
[2025-07-27 01:29:42] 2025-07-27 05:29:09,943 | INFO     | intersect: 21563345449.804985
[2025-07-27 01:29:42] 2025-07-27 05:29:09,943 | INFO     | chi2: 1.5974268546176196
[2025-07-27 01:29:42] 2025-07-27 05:29:09,944 | INFO     | sum of square deviations: 549294020.0
[2025-07-27 01:29:42] 2025-07-27 05:29:09,944 | INFO     | sum of deviations: -6457560528.000006
[2025-07-27 01:29:42] 2025-07-27 05:29:09,945 | INFO     | mean x: 1753590126.0
[2025-07-27 01:29:42] 2025-07-27 05:29:09,945 | INFO     | mean y: 2579789.247933884
[2025-07-27 01:29:42] 2025-07-27 05:29:09,945 | INFO     | -- intersect: 20617976949.311966
[2025-07-27 01:29:42] 2025-07-27 05:29:09,945 | INFO     | intersect: 20617976949.311966
[2025-07-27 01:29:42] 2025-07-27 05:29:09,946 | INFO     | chi2: 1.598643982797387
[2025-07-27 01:29:42] 2025-07-27 05:29:09,946 | INFO     | sufficient remaining disk space (18748538880 B)
[2025-07-27 01:29:42] 2025-07-27 05:29:09,946 | INFO     | current chi2=1.598643982797387 (change=-0.07619304610093322 %)
[2025-07-27 01:29:42] 2025-07-27 05:29:09,947 | INFO     | right removable region: 120
[2025-07-27 01:29:42] 2025-07-27 05:29:09,947 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-27 01:29:42] 2025-07-27 05:29:09,947 | INFO     | sum of square deviations: 549294020.0
[2025-07-27 01:29:42] 2025-07-27 05:29:09,948 | INFO     | sum of deviations: -26695884511.0
[2025-07-27 01:29:42] 2025-07-27 05:29:09,948 | INFO     | mean x: 1753590431.0
[2025-07-27 01:29:42] 2025-07-27 05:29:09,948 | INFO     | mean y: 2617531.884297521
[2025-07-27 01:29:42] 2025-07-27 05:29:09,949 | INFO     | -- intersect: 85227735448.82559
[2025-07-27 01:29:42] 2025-07-27 05:29:09,949 | INFO     | intersect: 85227735448.82559
[2025-07-27 01:29:42] 2025-07-27 05:29:09,949 | INFO     | chi2: 0.12807667599252073
[2025-07-27 01:29:42] 2025-07-27 05:29:09,949 | INFO     | current chi2=0.12807667599252073 (change=91.98231357997429 %)
[2025-07-27 01:29:42] 2025-07-27 05:29:09,950 | INFO     | sum of square deviations: 483971865.0
[2025-07-27 01:29:42] 2025-07-27 05:29:09,950 | INFO     | sum of deviations: -25804023122.5
[2025-07-27 01:29:42] 2025-07-27 05:29:09,951 | INFO     | mean x: 1753590583.5
[2025-07-27 01:29:42] 2025-07-27 05:29:09,951 | INFO     | mean y: 2615346.9913793104
[2025-07-27 01:29:42] 2025-07-27 05:29:09,951 | INFO     | -- intersect: 93499149415.21097
[2025-07-27 01:29:42] 2025-07-27 05:29:09,951 | INFO     | intersect: 93499149415.21097
[2025-07-27 01:29:42] 2025-07-27 05:29:09,951 | INFO     | chi2: 0.10649596730579461
[2025-07-27 01:29:42] 2025-07-27 05:29:09,952 | INFO     | current chi2=0.10649596730579461 (change=16.849835084716258 %)
[2025-07-27 01:29:42] 2025-07-27 05:29:09,952 | INFO     | left removable region: 20
[2025-07-27 01:29:42] 2025-07-27 05:29:09,952 | INFO     | sum of square deviations: 310052325.0
[2025-07-27 01:29:42] 2025-07-27 05:29:09,953 | INFO     | sum of deviations: -18521710203.5
[2025-07-27 01:29:42] 2025-07-27 05:29:09,953 | INFO     | mean x: 1753590705.5
[2025-07-27 01:29:42] 2025-07-27 05:29:09,953 | INFO     | mean y: 2605240.13
[2025-07-27 01:29:42] 2025-07-27 05:29:09,953 | INFO     | -- intersect: 104757500604.3951
[2025-07-27 01:29:42] 2025-07-27 05:29:09,954 | INFO     | intersect: 104757500604.3951
[2025-07-27 01:29:42] 2025-07-27 05:29:09,954 | INFO     | chi2: 0.0983620877515858
[2025-07-27 01:29:42] 2025-07-27 05:29:09,954 | INFO     | -- intersect: 104757500604.3951
[2025-07-27 01:29:42] 2025-07-27 05:29:09,954 | INFO     | current memory leak: -59.74 B/s (using 100 data points, chi2=0.10)
[2025-07-27 01:29:42] 2025-07-27 05:29:09,955 | INFO     | could have reported an average CPU frequency of 2153 MHz (8 samples)
[2025-07-27 01:29:42] 2025-07-27 05:29:09,955 | INFO     | ..............................
[2025-07-27 01:29:42] 2025-07-27 05:29:09,955 | INFO     | . Timing measurements:
[2025-07-27 01:29:42] 2025-07-27 05:29:09,955 | INFO     | . get job = 0 s
[2025-07-27 01:29:42] 2025-07-27 05:29:09,956 | INFO     | . initial setup = 2 s
[2025-07-27 01:29:42] 2025-07-27 05:29:09,956 | INFO     | . payload setup = 11 s
[2025-07-27 01:29:42] 2025-07-27 05:29:09,956 | INFO     | . stage-in = 0 s
[2025-07-27 01:29:42] 2025-07-27 05:29:09,956 | INFO     | . payload execution = 7678 s
[2025-07-27 01:29:42] 2025-07-27 05:29:09,956 | INFO     | . stage-out = 0 s
[2025-07-27 01:29:42] 2025-07-27 05:29:09,956 | INFO     | . log creation = 0 s
[2025-07-27 01:29:42] 2025-07-27 05:29:09,957 | INFO     | ..............................
[2025-07-27 01:29:42] 2025-07-27 05:29:09,978 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6745016216: 3220015 B (within 2537553920 B limit)
[2025-07-27 01:29:42] 2025-07-27 05:29:09,994 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6745016216/HITS.45743349._020470.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-27 01:29:42] 2025-07-27 05:29:10,004 | INFO     | total size of present files: 0 B (workdir size: 3220015 B)
[2025-07-27 01:29:42] 2025-07-27 05:29:10,015 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6745016216/HITS.45743349._020470.pool.root.1 since it does not exist
[2025-07-27 01:29:42] 2025-07-27 05:29:10,051 | INFO     | 
[2025-07-27 01:29:42] 2025-07-27 05:29:10,051 | INFO     | job summary report
[2025-07-27 01:29:42] 2025-07-27 05:29:10,051 | INFO     | --------------------------------------------------
[2025-07-27 01:29:42] 2025-07-27 05:29:10,051 | INFO     | PanDA job id: 6745016216
[2025-07-27 01:29:42] 2025-07-27 05:29:10,052 | INFO     | task id: 45743349
[2025-07-27 01:29:42] 2025-07-27 05:29:10,052 | INFO     | errors: (none)
[2025-07-27 01:29:42] 2025-07-27 05:29:10,052 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 01:29:42] 2025-07-27 05:29:10,052 | INFO     | pilot state: finished 
[2025-07-27 01:29:42] 2025-07-27 05:29:10,053 | INFO     | transexitcode: 0
[2025-07-27 01:29:42] 2025-07-27 05:29:10,053 | INFO     | exeerrorcode: 0
[2025-07-27 01:29:42] 2025-07-27 05:29:10,053 | INFO     | exeerrordiag: 
[2025-07-27 01:29:42] 2025-07-27 05:29:10,053 | INFO     | exitcode: 0
[2025-07-27 01:29:42] 2025-07-27 05:29:10,053 | INFO     | exitmsg: OK
[2025-07-27 01:29:42] 2025-07-27 05:29:10,054 | INFO     | cpuconsumptiontime: 57599 s
[2025-07-27 01:29:42] 2025-07-27 05:29:10,054 | INFO     | nevents: 400
[2025-07-27 01:29:42] 2025-07-27 05:29:10,054 | INFO     | neventsw: 0
[2025-07-27 01:29:42] 2025-07-27 05:29:10,054 | INFO     | pid: 6165
[2025-07-27 01:29:42] 2025-07-27 05:29:10,054 | INFO     | pgrp: 6165
[2025-07-27 01:29:42] 2025-07-27 05:29:10,054 | INFO     | corecount: 8
[2025-07-27 01:29:42] 2025-07-27 05:29:10,055 | INFO     | event service: False
[2025-07-27 01:29:42] 2025-07-27 05:29:10,055 | INFO     | sizes: {0: 2397471, 6: 2397733, 11: 2397761, 7693: 2425329, 7695: 2434383, 7701: 2434549}
[2025-07-27 01:29:42] 2025-07-27 05:29:10,055 | INFO     | --------------------------------------------------
[2025-07-27 01:29:42] 2025-07-27 05:29:10,055 | INFO     | 
[2025-07-27 01:29:42] 2025-07-27 05:29:10,055 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 01:29:42] 2025-07-27 05:29:10,082 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 01:29:42] 2025-07-27 05:29:10,083 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 01:29:42] 2025-07-27 05:29:10,083 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 01:29:42] 2025-07-27 05:29:10,083 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 01:29:42] 2025-07-27 05:29:10,083 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 01:29:42] 2025-07-27 05:29:10,083 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 01:29:42] 2025-07-27 05:29:10,083 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 01:29:42] 2025-07-27 05:29:10,084 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 01:29:42] 2025-07-27 05:29:10,084 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 01:29:42] 2025-07-27 05:29:10,084 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 01:29:42] 2025-07-27 05:29:10,084 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 01:29:42] 2025-07-27 05:29:10,084 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 01:29:42] 2025-07-27 05:29:10,085 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 01:29:42] 2025-07-27 05:29:10,085 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 01:29:42] 2025-07-27 05:29:10,085 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 01:29:42] 2025-07-27 05:29:10,085 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 01:29:42] 2025-07-27 05:29:10,085 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 01:29:42] 2025-07-27 05:29:10,086 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 01:29:42] 2025-07-27 05:29:10,086 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 01:29:42] 2025-07-27 05:29:10,086 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 01:29:42] 2025-07-27 05:29:10,086 | INFO     | job 6745016216 has completed (purged errors)
[2025-07-27 01:29:42] 2025-07-27 05:29:10,086 | INFO     | overall cleanup function is called
[2025-07-27 01:29:42] 2025-07-27 05:29:10,157 | INFO     | number of running child processes to parent process 6165: 1
[2025-07-27 01:29:42] 2025-07-27 05:29:10,157 | INFO     | maximum number of monitored processes: 6
[2025-07-27 01:29:42] 2025-07-27 05:29:10,157 | INFO     | aborting job monitoring since job object (job id=6745016216) has expired
[2025-07-27 01:29:42] 2025-07-27 05:29:11,094 | INFO     | --- collectZombieJob: --- 10, [6165]
[2025-07-27 01:29:42] 2025-07-27 05:29:11,095 | INFO     | zombie collector waiting for pid 6165
[2025-07-27 01:29:42] 2025-07-27 05:29:11,095 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 01:29:42] 2025-07-27 05:29:11,095 | INFO     | collected zombie processes
[2025-07-27 01:29:42] 2025-07-27 05:29:11,095 | INFO     | will attempt to kill all subprocesses of pid=6165
[2025-07-27 01:29:42] 2025-07-27 05:29:11,178 | INFO     | process IDs to be killed: [6165] (in reverse order)
[2025-07-27 01:29:42] 2025-07-27 05:29:11,233 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 01:29:42] 2025-07-27 05:29:11,234 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 01:29:42] 2025-07-27 05:29:11,238 | INFO     | did not find any defunct processes belonging to 6165
[2025-07-27 01:29:42] 2025-07-27 05:29:11,241 | INFO     | did not find any defunct processes belonging to 6165
[2025-07-27 01:29:42] 2025-07-27 05:29:11,242 | INFO     | ready for new job
[2025-07-27 01:29:42] 2025-07-27 05:29:11,242 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 01:29:42] 2025-07-27 05:29:11,243 | INFO     | ***************************************
[2025-07-27 01:29:42] 2025-07-27 05:29:11,243 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 01:29:42] 2025-07-27 05:29:11,243 | INFO     | ***************************************
[2025-07-27 01:29:42] 2025-07-27 05:29:11,243 | INFO     | 
[2025-07-27 01:29:42] 2025-07-27 05:29:11,244 | INFO     | architecture information:
[2025-07-27 01:29:42] 2025-07-27 05:29:11,244 | INFO     | executing command: cat /etc/os-release
[2025-07-27 01:29:42] 2025-07-27 05:29:11,278 | INFO     | cat /etc/os-release:
[2025-07-27 01:29:42] NAME="CentOS Linux"
[2025-07-27 01:29:42] VERSION="7 (Core)"
[2025-07-27 01:29:42] ID="centos"
[2025-07-27 01:29:42] ID_LIKE="rhel fedora"
[2025-07-27 01:29:42] VERSION_ID="7"
[2025-07-27 01:29:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 01:29:42] ANSI_COLOR="0;31"
[2025-07-27 01:29:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 01:29:42] HOME_URL="https://www.centos.org/"
[2025-07-27 01:29:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 01:29:42] 
[2025-07-27 01:29:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 01:29:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 01:29:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 01:29:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 01:29:42] 
[2025-07-27 01:29:42] 2025-07-27 05:29:11,278 | INFO     | ***************************************
[2025-07-27 01:29:42] 2025-07-27 05:29:11,792 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 01:29:42] 2025-07-27 05:29:11,813 | INFO     | sufficient remaining disk space (18752733184 B)
[2025-07-27 01:29:42] 2025-07-27 05:29:11,813 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 01:29:42] 2025-07-27 05:29:11,814 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 01:29:42] 2025-07-27 05:29:11,814 | INFO     | update_server=False
[2025-07-27 01:29:42] 2025-07-27 05:29:11,814 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 01:29:42] 2025-07-27 05:29:11,814 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 01:29:42] 2025-07-27 05:29:11,815 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 01:29:42] 2025-07-27 05:29:11,815 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 01:29:42] 2025-07-27 05:29:11,815 | INFO     | aborting loop
[2025-07-27 01:29:42] 2025-07-27 05:29:12,044 | INFO     | all payload control threads have been joined
[2025-07-27 01:29:42] 2025-07-27 05:29:12,195 | INFO     | all data control threads have been joined
[2025-07-27 01:29:42] 2025-07-27 05:29:12,820 | INFO     | [job] retrieve thread has finished
[2025-07-27 01:29:42] 2025-07-27 05:29:12,820 | INFO     | [job] queue monitor thread has finished
[2025-07-27 01:29:42] 2025-07-27 05:29:12,821 | INFO     | [job] job monitor thread has finished
[2025-07-27 01:29:42] 2025-07-27 05:29:12,861 | INFO     | [job] validate thread has finished
[2025-07-27 01:29:42] 2025-07-27 05:29:12,966 | INFO     | all job control threads have been joined
[2025-07-27 01:29:42] 2025-07-27 05:29:13,049 | INFO     | [payload] control thread has finished
[2025-07-27 01:29:42] 2025-07-27 05:29:13,074 | INFO     | [data] copytool_in thread has finished
[2025-07-27 01:29:42] 2025-07-27 05:29:13,075 | INFO     | [payload] failed_post thread has finished
[2025-07-27 01:29:42] 2025-07-27 05:29:13,159 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 01:29:42] 2025-07-27 05:29:13,159 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 01:29:42] 2025-07-27 05:29:13,200 | INFO     | [data] control thread has finished
[2025-07-27 01:29:42] 2025-07-27 05:29:13,325 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 01:29:42] 2025-07-27 05:29:13,821 | INFO     | [data] copytool_out thread has finished
[2025-07-27 01:29:42] 2025-07-27 05:29:13,972 | INFO     | [job] control thread has finished
[2025-07-27 01:29:42] 2025-07-27 05:29:14,036 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 01:29:42] 2025-07-27 05:29:14,099 | INFO     | [payload] validate_post thread has finished
[2025-07-27 01:29:42] 2025-07-27 05:29:14,273 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 01:29:42] 2025-07-27 05:29:18,042 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 01:29:42] 2025-07-27 05:29:18,628 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140228701800256)>', '<ExcThread(monitor, started 140227947501312)>']
[2025-07-27 01:29:42] 2025-07-27 05:29:23,649 | INFO     | all workflow threads have been joined
[2025-07-27 01:29:42] 2025-07-27 05:29:23,649 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 01:29:42] 2025-07-27 05:29:23,650 | INFO     | traces error code: 0
[2025-07-27 01:29:42] 2025-07-27 05:29:23,652 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 01:29:42] 2025-07-27 05:29:42,582 | INFO     | PID=31952 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 01:29:42] 2025-07-27 05:29:42,584 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 01:29:42] 2025-07-27 05:29:42,584 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 01:29:42] 2025-07-27 05:29:42,584 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 01:29:42] 2025-07-27 05:29:42,584 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 01:29:42] 2025-07-27 05:29:42,584 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 01:29:42] 2025-07-27 05:29:42,584 | INFO     | [monitor] control thread has ended
[2025-07-27 01:29:42] 2025-07-27 05:29:42,699 [wrapper] ==== pilot stdout END ====
[2025-07-27 01:29:42] 2025-07-27 05:29:42,703 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 01:29:42] 2025-07-27 05:29:42,709 [wrapper] pilotpid: 31952
[2025-07-27 01:29:42] 2025-07-27 05:29:42,714 [wrapper] Pilot exit status: 0
[2025-07-27 01:29:42] 2025-07-27 05:29:42,732 [wrapper] pandaids: 6745016216
[2025-07-27 01:29:42] 2025-07-27 05:29:42,780 [wrapper] cleanup supervisor_pilot 21305 31953
[2025-07-27 01:29:42] 2025-07-27 05:29:42,785 [wrapper] Test setup, not cleaning
[2025-07-27 01:29:42] 2025-07-27 05:29:42,789 [wrapper] apfmon messages muted
[2025-07-27 01:29:42] 2025-07-27 05:29:42,793 [wrapper] ==== wrapper stdout END ====
[2025-07-27 01:29:42] 2025-07-27 05:29:42,797 [wrapper] ==== wrapper stderr END ====
[2025-07-27 01:29:42]  *** Error codes and diagnostics ***
[2025-07-27 01:29:42]     "exeErrorCode": 0,
[2025-07-27 01:29:42]     "exeErrorDiag": "",
[2025-07-27 01:29:42]     "pilotErrorCode": 0,
[2025-07-27 01:29:42]     "pilotErrorDiag": "",
[2025-07-27 01:29:42]  *** Listing of results directory ***
[2025-07-27 01:29:42] total 343640
[2025-07-27 01:29:42] -rw-r--r-- 1 boincer umatlas    530466 Jul 25 07:25 pilot3.tar.gz
[2025-07-27 01:29:42] -rw-r--r-- 1 boincer umatlas      5112 Jul 25 07:33 queuedata.json
[2025-07-27 01:29:42] -rwx------ 1 boincer umatlas     36292 Jul 25 07:35 runpilot2-wrapper.sh
[2025-07-27 01:29:42] -rw-r--r-- 1 boincer umatlas       100 Jul 26 23:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 01:29:42] -rwxr-xr-x 1 boincer umatlas      7986 Jul 26 23:20 run_atlas
[2025-07-27 01:29:42] -rw-r--r-- 1 boincer umatlas       105 Jul 26 23:20 job.xml
[2025-07-27 01:29:42] -rw-r--r-- 2 boincer umatlas 141292885 Jul 26 23:20 EVNT.45743347._001173.pool.root.1
[2025-07-27 01:29:42] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 23:20 start_atlas.sh
[2025-07-27 01:29:42] drwxrwx--x 2 boincer umatlas      4096 Jul 26 23:20 shared
[2025-07-27 01:29:42] -rw-r--r-- 2 boincer umatlas    542891 Jul 26 23:20 input.tar.gz
[2025-07-27 01:29:42] -rw-r--r-- 1 boincer umatlas         0 Jul 26 23:20 boinc_lockfile
[2025-07-27 01:29:42] -rw-r--r-- 1 boincer umatlas      2561 Jul 26 23:20 pandaJob.out
[2025-07-27 01:29:42] -rw------- 1 boincer umatlas    980125 Jul 26 23:20 agis_schedconf.cvmfs.json
[2025-07-27 01:29:42] -rw------- 1 boincer umatlas   1593052 Jul 26 23:20 agis_ddmendpoints.agis.ALL.json
[2025-07-27 01:29:42] drwx------ 4 boincer umatlas      4096 Jul 26 23:20 pilot3
[2025-07-27 01:29:42] -rw-r--r-- 1 boincer umatlas      5825 Jul 27 01:18 init_data.xml
[2025-07-27 01:29:42] -rw------- 1 boincer umatlas 204665444 Jul 27 01:28 HITS.45743349._020470.pool.root.1
[2025-07-27 01:29:42] -rw-r--r-- 1 boincer umatlas       530 Jul 27 01:28 boinc_task_state.xml
[2025-07-27 01:29:42] -rw------- 1 boincer umatlas      1049 Jul 27 01:28 memory_monitor_summary.json
[2025-07-27 01:29:42] -rw------- 1 boincer umatlas    320908 Jul 27 01:29 log.45743349._020470.job.log.tgz.1
[2025-07-27 01:29:42] -rw------- 1 boincer umatlas      7848 Jul 27 01:29 heartbeat.json
[2025-07-27 01:29:42] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 01:29 boinc_mmap_file
[2025-07-27 01:29:42] -rw-r--r-- 1 boincer umatlas        27 Jul 27 01:29 wrapper_checkpoint.txt
[2025-07-27 01:29:42] -rw------- 1 boincer umatlas        95 Jul 27 01:29 pilot_heartbeat.json
[2025-07-27 01:29:42] -rw------- 1 boincer umatlas       815 Jul 27 01:29 pilotlog.txt
[2025-07-27 01:29:42] -rw------- 1 boincer umatlas    705928 Jul 27 01:29 log.45743349._020470.job.log.1
[2025-07-27 01:29:42] -rw------- 1 boincer umatlas       357 Jul 27 01:29 output.list
[2025-07-27 01:29:42] -rw-r--r-- 1 boincer umatlas       620 Jul 27 01:29 runtime_log
[2025-07-27 01:29:42] -rw------- 1 boincer umatlas   1044480 Jul 27 01:29 result.tar.gz
[2025-07-27 01:29:42] -rw-r--r-- 1 boincer umatlas      8660 Jul 27 01:29 runtime_log.err
[2025-07-27 01:29:42] -rw------- 1 boincer umatlas       660 Jul 27 01:29 F6XNDmPtVz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkRPLDmEgUV5n.diag
[2025-07-27 01:29:42] -rw-r--r-- 1 boincer umatlas     21264 Jul 27 01:29 stderr.txt
[2025-07-27 01:29:42] HITS file was successfully produced:
[2025-07-27 01:29:42] -rw------- 1 boincer umatlas 204665444 Jul 27 01:28 shared/HITS.pool.root.1
[2025-07-27 01:29:42]  *** Contents of shared directory: ***
[2025-07-27 01:29:42] total 339428
[2025-07-27 01:29:42] -rw-r--r-- 2 boincer umatlas 141292885 Jul 26 23:20 ATLAS.root_0
[2025-07-27 01:29:42] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 23:20 start_atlas.sh
[2025-07-27 01:29:42] -rw-r--r-- 2 boincer umatlas    542891 Jul 26 23:20 input.tar.gz
[2025-07-27 01:29:42] -rw------- 1 boincer umatlas 204665444 Jul 27 01:28 HITS.pool.root.1
[2025-07-27 01:29:42] -rw------- 1 boincer umatlas   1044480 Jul 27 01:29 result.tar.gz
01:29:43 (28357): run_atlas exited; CPU time 57540.577556
01:29:43 (28357): called boinc_finish(0)

</stderr_txt>
]]>

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