Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-28 09:34:58 (7780): Detected: vboxwrapper 26206
2025-07-28 09:34:58 (7780): Detected: BOINC client v7.16.20
2025-07-28 09:34:59 (7780): Detected: VirtualBox VboxManage Interface (Version: 6.0.14)
2025-07-28 09:35:00 (7780): Successfully copied 'init_data.xml' to the shared directory.
2025-07-28 09:35:00 (7780): Create VM. (boinc_9130a99bf142ba6b, slot#0)
2025-07-28 09:35:01 (7780): Setting Memory Size for VM. (4800MB)
2025-07-28 09:35:01 (7780): Setting CPU Count for VM. (8)
2025-07-28 09:35:02 (7780): Setting Chipset Options for VM.
2025-07-28 09:35:02 (7780): Setting Graphics Controller Options for VM.
2025-07-28 09:35:02 (7780): Setting Boot Options for VM.
2025-07-28 09:35:02 (7780): Setting Network Configuration for NAT.
2025-07-28 09:35:03 (7780): Enabling VM Network Access.
2025-07-28 09:35:03 (7780): Disabling USB Support for VM.
2025-07-28 09:35:03 (7780): Disabling COM Port Support for VM.
2025-07-28 09:35:03 (7780): Disabling LPT Port Support for VM.
2025-07-28 09:35:04 (7780): Disabling Audio Support for VM.
2025-07-28 09:35:04 (7780): Disabling Clipboard Support for VM.
2025-07-28 09:35:04 (7780): Disabling Drag and Drop Support for VM.
2025-07-28 09:35:04 (7780): Adding storage controller(s) to VM.
2025-07-28 09:35:05 (7780): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-28 09:35:06 (7780): Adding VirtualBox Guest Additions to VM.
2025-07-28 09:35:06 (7780): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-28 09:35:06 (7780): forwarding host port 55298 to guest port 80
2025-07-28 09:35:06 (7780): Enabling remote desktop for VM.
2025-07-28 09:35:07 (7780): Required extension pack not installed, remote desktop not enabled.
2025-07-28 09:35:07 (7780): Enabling shared directory for VM.
2025-07-28 09:35:07 (7780): Starting VM using VBoxManage interface. (boinc_9130a99bf142ba6b, slot#0)
2025-07-28 09:35:13 (7780): Successfully started VM. (PID = '1868')
2025-07-28 09:35:13 (7780): Reporting VM Process ID to BOINC.
2025-07-28 09:35:13 (7780): Guest Log: BIOS: VirtualBox 6.0.14
2025-07-28 09:35:13 (7780): Guest Log: CPUID EDX: 0x178bfbff
2025-07-28 09:35:13 (7780): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-28 09:35:13 (7780): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-28 09:35:13 (7780): Detected: Web Application Enabled (http://localhost:55298)
2025-07-28 09:35:13 (7780): Preference change detected
2025-07-28 09:35:13 (7780): Setting CPU throttle for VM. (100%)
2025-07-28 09:35:13 (7780): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-28 09:35:15 (7780): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-28 09:35:15 (7780): Guest Log: BIOS: Booting from Hard Disk...
2025-07-28 09:35:18 (7780): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-28 09:35:18 (7780): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-28 09:35:18 (7780): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-28 09:35:18 (7780): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-28 09:35:18 (7780): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-28 09:35:18 (7780): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-28 09:35:18 (7780): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-28 09:35:18 (7780): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-28 09:35:18 (7780): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-28 09:35:18 (7780): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-28 09:35:18 (7780): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-28 09:35:18 (7780): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-28 09:35:18 (7780): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-28 09:35:18 (7780): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-28 09:35:18 (7780): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-28 09:35:18 (7780): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-28 09:35:18 (7780): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-28 09:35:18 (7780): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-28 09:35:18 (7780): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-28 09:35:18 (7780): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-28 09:35:18 (7780): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-28 09:35:18 (7780): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-28 09:35:18 (7780): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-28 09:35:18 (7780): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-28 09:35:18 (7780): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-28 09:35:18 (7780): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-28 09:35:18 (7780): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-28 09:35:18 (7780): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-28 09:35:18 (7780): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-28 09:35:18 (7780): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-28 09:35:18 (7780): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-28 09:35:18 (7780): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-28 09:35:30 (7780): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-28 09:35:30 (7780): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-28 09:35:52 (7780): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-28 09:35:52 (7780): Guest Log: 00:00:00.000498 main     Log opened 2025-07-28T09:35:51.348990000Z
2025-07-28 09:35:52 (7780): Guest Log: 00:00:00.000723 main     OS Product: Linux
2025-07-28 09:35:52 (7780): Guest Log: 00:00:00.000899 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-28 09:35:52 (7780): Guest Log: 00:00:00.001000 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-28 09:35:52 (7780): Guest Log: 00:00:00.001149 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-28 09:35:52 (7780): Guest Log: 00:00:00.001153 main     Process ID: 1367
2025-07-28 09:35:52 (7780): Guest Log: 00:00:00.001155 main     Package type: LINUX_64BITS_GENERIC
2025-07-28 09:35:52 (7780): Guest Log: 00:00:00.003240 main     5.2.32 r132073 started. Verbose level = 0
2025-07-28 09:35:53 (7780): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-28 09:35:53 (7780): Guest Log: [INFO] Mounting shared directory
2025-07-28 09:35:53 (7780): Guest Log: [INFO] Checking for init_data.xml
2025-07-28 09:36:02 (7780): Guest Log: 00:00:10.007782 timesync vgsvcTimeSyncWorker: Radical guest time change: -28 789 230 443 000ns (GuestNow=1 753 666 562 124 888 000 ns GuestLast=1 753 695 351 355 331 000 ns fSetTimeLastLoop=true )
2025-07-28 09:36:17 (7780): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-28 09:36:17 (7780): Guest Log: [INFO] Detected branch: prod
2025-07-28 09:36:17 (7780): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-28 09:36:17 (7780): Guest Log: Copying input files
2025-07-28 09:36:19 (7780): Guest Log: Copied input files into RunAtlas.
2025-07-28 09:36:19 (7780): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-28 09:36:19 (7780): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-28 09:36:19 (7780): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-28 09:36:19 (7780): Guest Log: Further information can be found at the LHC@home message board.
2025-07-28 09:36:47 (7780): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-28 09:36:47 (7780): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-28 09:36:47 (7780): Guest Log: 2.6.3.0 1665 0 30160 148830 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-07-28 09:37:00 (7780): Guest Log: copied the webapp to /var/www
2025-07-28 09:37:00 (7780): Guest Log: ATHENA_PROC_NUMBER=8
2025-07-28 09:37:01 (7780): Guest Log: ATHENA_CORE_NUMBER=8
2025-07-28 09:37:01 (7780): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-28 09:37:01 (7780): Guest Log:  *** Starting ATLAS job. (PandaID=6745776815 taskID=45743349) ***
2025-07-28 10:10:09 (7780): Guest Log:  *** Job finished ***
2025-07-28 10:10:09 (7780): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-28 10:10:09 (7780): Guest Log: 2025-07-28 02:09:46,922 | INFO     | all workflow threads have been joined
2025-07-28 10:10:09 (7780): Guest Log: 2025-07-28 02:09:46,922 | INFO     | end of generic workflow (traces error code: 0)
2025-07-28 10:10:09 (7780): Guest Log: 2025-07-28 02:09:46,922 | INFO     | traces error code: 0
2025-07-28 10:10:09 (7780): Guest Log: 2025-07-28 02:09:46,923 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-28 10:10:09 (7780): Guest Log: 2025-07-28 02:10:05,034 | INFO     | PID=6031 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-07-28 10:10:09 (7780): Guest Log: 2025-07-28 02:10:05,035 | INFO     | found 0 job(s) in 20 queues
2025-07-28 10:10:09 (7780): Guest Log: 2025-07-28 02:10:05,036 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-07-28 10:10:09 (7780): Guest Log: 2025-07-28 02:10:05,036 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-07-28 10:10:09 (7780): Guest Log: 2025-07-28 02:10:05,036 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-28 10:10:09 (7780): Guest Log: 2025-07-28 02:10:05,036 | INFO     | [monitor] control thread has ended
2025-07-28 10:10:09 (7780): Guest Log: 2025-07-28 02:10:05,326 [wrapper] ==== pilot stdout END ====
2025-07-28 10:10:09 (7780): Guest Log: 2025-07-28 02:10:05,349 [wrapper] ==== wrapper stdout RESUME ====
2025-07-28 10:10:09 (7780): Guest Log: 2025-07-28 02:10:05,369 [wrapper] pilotpid: 6031
2025-07-28 10:10:09 (7780): Guest Log: 2025-07-28 02:10:05,387 [wrapper] Pilot exit status: 0
2025-07-28 10:10:09 (7780): Guest Log: 2025-07-28 02:10:06,873 [wrapper] pandaids: 6745776815
2025-07-28 10:10:09 (7780): Guest Log: 2025-07-28 02:10:06,971 [wrapper] cleanup supervisor_pilot 20925 6032
2025-07-28 10:10:09 (7780): Guest Log: 2025-07-28 02:10:06,987 [wrapper] Test setup, not cleaning
2025-07-28 10:10:09 (7780): Guest Log: 2025-07-28 02:10:07,004 [wrapper] apfmon messages muted
2025-07-28 10:10:09 (7780): Guest Log: 2025-07-28 02:10:07,019 [wrapper] ==== wrapper stdout END ====
2025-07-28 10:10:09 (7780): Guest Log: 2025-07-28 02:10:07,036 [wrapper] ==== wrapper stderr END ====
2025-07-28 10:10:09 (7780): Guest Log:  *** Error codes and diagnostics ***
2025-07-28 10:10:09 (7780): Guest Log:     "exeErrorCode": 65,
2025-07-28 10:10:09 (7780): Guest Log:     "exeErrorDiag": "EVNTtoHITS got a SIGTRAP signal (exit code 133); G4 exception at line 1319 (see jobReport for further details)",
2025-07-28 10:10:09 (7780): Guest Log:     "pilotErrorCode": 1305,
2025-07-28 10:10:09 (7780): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGTRAP signal (exit code 133); G4 exception at line 1319 (see jobReport for further details)",
2025-07-28 10:10:09 (7780): Guest Log:  *** Listing of results directory ***
2025-07-28 10:10:09 (7780): Guest Log: total 4272
2025-07-28 10:10:09 (7780): Guest Log: -rw-r--r--. 1 atlas atlas  530466 Jul 26 21:42 pilot3.tar.gz
2025-07-28 10:10:09 (7780): Guest Log: -rwx------. 1 atlas atlas   36292 Jul 26 21:49 runpilot2-wrapper.sh
2025-07-28 10:10:09 (7780): Guest Log: -rw-r--r--. 1 atlas atlas    5112 Jul 26 21:49 queuedata.json
2025-07-28 10:10:09 (7780): Guest Log: -rwxr-xr-x. 1 atlas atlas    6001 Jul 28 01:36 init_data.xml
2025-07-28 10:10:09 (7780): Guest Log: -rwxr-xr-x. 1 atlas atlas  542901 Jul 28 01:36 input.tar.gz
2025-07-28 10:10:09 (7780): Guest Log: -rwxr-xr-x. 1 atlas atlas   15095 Jul 28 01:36 start_atlas.sh
2025-07-28 10:10:09 (7780): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Jul 28 01:36 EVNT.45743347._000889.pool.root.1 -> /data/./ATLAS.root_0
2025-07-28 10:10:09 (7780): Guest Log: -rw-r--r--. 1 atlas atlas    2562 Jul 28 01:37 pandaJob.out
2025-07-28 10:10:09 (7780): Guest Log: -rw-------. 1 atlas atlas  980125 Jul 28 01:40 agis_schedconf.cvmfs.json
2025-07-28 10:10:09 (7780): Guest Log: -rw-------. 1 atlas atlas 1593052 Jul 28 01:40 agis_ddmendpoints.agis.ALL.json
2025-07-28 10:10:09 (7780): Guest Log: drwx------. 4 atlas atlas    4096 Jul 28 01:40 pilot3
2025-07-28 10:10:09 (7780): Guest Log: -rw-------. 1 atlas atlas    1026 Jul 28 02:07 memory_monitor_summary.json
2025-07-28 10:10:09 (7780): Guest Log: -rw-------. 1 atlas atlas   78510 Jul 28 02:07 log.45743349._045143.job.log.tgz.1
2025-07-28 10:10:09 (7780): Guest Log: -rw-------. 1 atlas atlas   10971 Jul 28 02:09 heartbeat.json
2025-07-28 10:10:09 (7780): Guest Log: -rw-------. 1 atlas atlas      95 Jul 28 02:09 pilot_heartbeat.json
2025-07-28 10:10:09 (7780): Guest Log: -rw-------. 1 atlas atlas     744 Jul 28 02:10 pilotlog.txt
2025-07-28 10:10:09 (7780): Guest Log: -rw-------. 1 atlas atlas  201981 Jul 28 02:10 log.45743349._045143.job.log.1
2025-07-28 10:10:09 (7780): Guest Log: -rw-------. 1 atlas atlas     188 Jul 28 02:10 output.list
2025-07-28 10:10:09 (7780): Guest Log: -rw-r--r--. 1 atlas atlas     620 Jul 28 02:10 runtime_log
2025-07-28 10:10:09 (7780): Guest Log: -rw-------. 1 atlas atlas  307200 Jul 28 02:10 result.tar.gz
2025-07-28 10:10:09 (7780): Guest Log: -rw-r--r--. 1 atlas atlas    8453 Jul 28 02:10 runtime_log.err
2025-07-28 10:10:09 (7780): Guest Log: -rw-------. 1 atlas atlas     651 Jul 28 02:10 lOLNDmKx1z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRGTLDm4b4hXo.diag
2025-07-28 10:10:09 (7780): Guest Log: Looking for outputfile HITS.45743349._045143.pool.root.1
2025-07-28 10:10:09 (7780): Guest Log: No HITS file was produced
2025-07-28 10:10:09 (7780): Guest Log: Successfully finished the ATLAS job!
2025-07-28 10:10:09 (7780): Guest Log: Copying the results back to the shared directory!
2025-07-28 10:10:09 (7780): Guest Log:  *** Contents of shared directory: ***
2025-07-28 10:10:09 (7780): Guest Log: total 140272
2025-07-28 10:10:09 (7780): Guest Log: -rwxrwxrwx. 1 root root 142761635 Jul 28 01:34 ATLAS.root_0
2025-07-28 10:10:09 (7780): Guest Log: -rwxrwxrwx. 1 root root      6001 Jul 28 01:34 init_data.xml
2025-07-28 10:10:09 (7780): Guest Log: -rwxrwxrwx. 1 root root    542901 Jul 27 03:06 input.tar.gz
2025-07-28 10:10:09 (7780): Guest Log: -rwxrwxrwx. 1 root root    307200 Jul 28 02:10 result.tar.gz
2025-07-28 10:10:09 (7780): Guest Log: -rwxrwxrwx. 1 root root     15095 Jul 27 03:06 start_atlas.sh
2025-07-28 10:10:09 (7780): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-28 10:10:09 (7780): VM Completion File Detected.
2025-07-28 10:10:09 (7780): Powering off VM.
2025-07-28 10:10:10 (7780): Successfully stopped VM.
2025-07-28 10:10:10 (7780): Deregistering VM. (boinc_9130a99bf142ba6b, slot#0)
2025-07-28 10:10:10 (7780): Removing network bandwidth throttle group from VM.
2025-07-28 10:10:10 (7780): Removing VM from VirtualBox.
10:10:16 (7780): called boinc_finish(0)

</stderr_txt>
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