Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
17:04:16 (2977844): wrapper (7.7.26015): starting
17:04:16 (2977844): wrapper: running run_atlas (--nthreads 3)
[2025-07-27 17:04:16] Arguments: --nthreads 3
[2025-07-27 17:04:16] Threads: 3
[2025-07-27 17:04:16] Checking for CVMFS
[2025-07-27 17:04:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 17:04:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 17:04:16] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 17:04:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 17:04:16] 2.9.2.0 1783837 4275 82064 148815 2 57 19596323 36864000 0 130560 0 3180438 99.990 151453 1687 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-27 17:04:16] CVMFS is ok
[2025-07-27 17:04:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 17:04:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 17:04:16] Further information can be found at the LHC@home message board.
[2025-07-27 17:04:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 17:04:16] Checking for apptainer binary...
[2025-07-27 17:04:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 17:04:16] Running /usr/bin/apptainer --version
[2025-07-27 17:04:16] apptainer version 1.3.6-6.1
[2025-07-27 17:04:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 17:04:16] atlasA223
[2025-07-27 17:04:16] apptainer works
[2025-07-27 17:04:16] Set ATHENA_PROC_NUMBER=3
[2025-07-27 17:04:16] Set ATHENA_CORE_NUMBER=3
[2025-07-27 17:04:16] Starting ATLAS job with PandaID=6745775584
[2025-07-27 17:04:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 18:42:39]  *** The last 200 lines of the pilot log: ***
[2025-07-27 18:42:39]  mtime=0
[2025-07-27 18:42:39]  protocol_id=None
[2025-07-27 18:42:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 18:42:39]  replicas=None
[2025-07-27 18:42:39]  scope=mc23_13p6TeV
[2025-07-27 18:42:39]  status=None
[2025-07-27 18:42:39]  status_code=0
[2025-07-27 18:42:39]  storage_token=
[2025-07-27 18:42:39]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6745775584/log.45743349._044951.job.log.tgz.1
[2025-07-27 18:42:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4a/43/log.45743349._044951.job.log.tgz.1
[2025-07-27 18:42:39]  workdir=None
[2025-07-27 18:42:39] ]
[2025-07-27 18:42:39] 2025-07-27 16:41:59,580 | INFO     | transferring file log.45743349._044951.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6745775584/log.45743349._044951.job.log.tgz.1 to /local/data/boinc/
[2025-07-27 18:42:39] 2025-07-27 16:41:59,580 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6745775584/log.45743349._044951.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0449
[2025-07-27 18:42:39] 2025-07-27 16:41:59,594 | INFO     | adding to output.list: log.45743349._044951.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4a/43/log.45743349._044951.job.log.tg
[2025-07-27 18:42:39] 2025-07-27 16:41:59,595 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 18:42:39] 2025-07-27 16:41:59,595 | INFO     | summary of transferred files:
[2025-07-27 18:42:39] 2025-07-27 16:41:59,595 | INFO     |  -- lfn=log.45743349._044951.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 18:42:39] 2025-07-27 16:41:59,595 | INFO     | stage-out finished correctly
[2025-07-27 18:42:39] 2025-07-27 16:42:00,741 | INFO     | PID=2981487 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 18:42:39] 2025-07-27 16:42:00,916 | INFO     | monitor loop #451: job 0:6745775584 is in state 'finished'
[2025-07-27 18:42:39] 2025-07-27 16:42:00,916 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 18:42:39] 2025-07-27 16:42:02,278 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 18:42:39] 2025-07-27 16:42:03,420 | INFO     | monitor loop #452: job 0:6745775584 is in state 'finished'
[2025-07-27 18:42:39] 2025-07-27 16:42:03,420 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 18:42:39] 2025-07-27 16:42:03,721 | INFO     | job 6745775584 has state=finished
[2025-07-27 18:42:39] 2025-07-27 16:42:03,721 | INFO     | preparing for final server update for job 6745775584 in state='finished'
[2025-07-27 18:42:39] 2025-07-27 16:42:03,721 | INFO     | this job has now completed (state=finished)
[2025-07-27 18:42:39] 2025-07-27 16:42:03,721 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 18:42:39] 2025-07-27 16:42:03,721 | INFO     | log transfer has been attempted: DONE
[2025-07-27 18:42:39] 2025-07-27 16:42:03,721 | INFO     | job 6745775584 has finished - writing final server update
[2025-07-27 18:42:39] 2025-07-27 16:42:03,722 | INFO     | total number of processed events: 400 (read)
[2025-07-27 18:42:39] 2025-07-27 16:42:03,722 | INFO     | executing command: lscpu
[2025-07-27 18:42:39] 2025-07-27 16:42:03,739 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 18:42:39] 2025-07-27 16:42:05,922 | INFO     | monitor loop #453: job 0:6745775584 is in state 'finished'
[2025-07-27 18:42:39] 2025-07-27 16:42:05,922 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 18:42:39] 2025-07-27 16:42:06,199 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 18:42:39] 2025-07-27 16:42:06,200 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3686.3885000000005
[2025-07-27 18:42:39] 2025-07-27 16:42:06,201 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745775584/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 18:42:39] 2025-07-27 16:42:06,202 | INFO     | extracted standard info from prmon json
[2025-07-27 18:42:39] 2025-07-27 16:42:06,202 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 18:42:39] 2025-07-27 16:42:06,202 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 18:42:39] 2025-07-27 16:42:06,202 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 18:42:39] 2025-07-27 16:42:06,202 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 18:42:39] 2025-07-27 16:42:06,203 | INFO     | fitting pss+swap vs Time
[2025-07-27 18:42:39] 2025-07-27 16:42:06,203 | INFO     | sum of square deviations: 218571540.0
[2025-07-27 18:42:39] 2025-07-27 16:42:06,203 | INFO     | sum of deviations: 1316472292.999999
[2025-07-27 18:42:39] 2025-07-27 16:42:06,203 | INFO     | mean x: 1753631671.0
[2025-07-27 18:42:39] 2025-07-27 16:42:06,203 | INFO     | mean y: 2362249.1235955055
[2025-07-27 18:42:39] 2025-07-27 16:42:06,203 | INFO     | -- intersect: -10559888934.16765
[2025-07-27 18:42:39] 2025-07-27 16:42:06,203 | INFO     | intersect: -10559888934.16765
[2025-07-27 18:42:39] 2025-07-27 16:42:06,203 | INFO     | chi2: 0.013233665991420633
[2025-07-27 18:42:39] 2025-07-27 16:42:06,203 | INFO     | -- intersect: -10559888934.16765
[2025-07-27 18:42:39] 2025-07-27 16:42:06,203 | INFO     | current memory leak: 6.02 B/s (using 89 data points, chi2=0.01)
[2025-07-27 18:42:39] 2025-07-27 16:42:06,203 | INFO     | could have reported an average CPU frequency of 3830 MHz (7 samples)
[2025-07-27 18:42:39] 2025-07-27 16:42:06,203 | INFO     | ..............................
[2025-07-27 18:42:39] 2025-07-27 16:42:06,203 | INFO     | . Timing measurements:
[2025-07-27 18:42:39] 2025-07-27 16:42:06,204 | INFO     | . get job = 0 s
[2025-07-27 18:42:39] 2025-07-27 16:42:06,204 | INFO     | . initial setup = 1 s
[2025-07-27 18:42:39] 2025-07-27 16:42:06,204 | INFO     | . payload setup = 3 s
[2025-07-27 18:42:39] 2025-07-27 16:42:06,204 | INFO     | . stage-in = 0 s
[2025-07-27 18:42:39] 2025-07-27 16:42:06,204 | INFO     | . payload execution = 5837 s
[2025-07-27 18:42:39] 2025-07-27 16:42:06,204 | INFO     | . stage-out = 0 s
[2025-07-27 18:42:39] 2025-07-27 16:42:06,204 | INFO     | . log creation = 0 s
[2025-07-27 18:42:39] 2025-07-27 16:42:06,204 | INFO     | ..............................
[2025-07-27 18:42:39] 2025-07-27 16:42:06,664 | INFO     | 
[2025-07-27 18:42:39] 2025-07-27 16:42:06,664 | INFO     | job summary report
[2025-07-27 18:42:39] 2025-07-27 16:42:06,664 | INFO     | --------------------------------------------------
[2025-07-27 18:42:39] 2025-07-27 16:42:06,664 | INFO     | PanDA job id: 6745775584
[2025-07-27 18:42:39] 2025-07-27 16:42:06,664 | INFO     | task id: 45743349
[2025-07-27 18:42:39] 2025-07-27 16:42:06,665 | INFO     | errors: (none)
[2025-07-27 18:42:39] 2025-07-27 16:42:06,665 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 18:42:39] 2025-07-27 16:42:06,665 | INFO     | pilot state: finished 
[2025-07-27 18:42:39] 2025-07-27 16:42:06,665 | INFO     | transexitcode: 0
[2025-07-27 18:42:39] 2025-07-27 16:42:06,665 | INFO     | exeerrorcode: 0
[2025-07-27 18:42:39] 2025-07-27 16:42:06,665 | INFO     | exeerrordiag: 
[2025-07-27 18:42:39] 2025-07-27 16:42:06,665 | INFO     | exitcode: 0
[2025-07-27 18:42:39] 2025-07-27 16:42:06,665 | INFO     | exitmsg: OK
[2025-07-27 18:42:39] 2025-07-27 16:42:06,665 | INFO     | cpuconsumptiontime: 16941 s
[2025-07-27 18:42:39] 2025-07-27 16:42:06,665 | INFO     | nevents: 400
[2025-07-27 18:42:39] 2025-07-27 16:42:06,665 | INFO     | neventsw: 0
[2025-07-27 18:42:39] 2025-07-27 16:42:06,665 | INFO     | pid: 2987979
[2025-07-27 18:42:39] 2025-07-27 16:42:06,665 | INFO     | pgrp: 2987979
[2025-07-27 18:42:39] 2025-07-27 16:42:06,665 | INFO     | corecount: 3
[2025-07-27 18:42:39] 2025-07-27 16:42:06,665 | INFO     | event service: False
[2025-07-27 18:42:39] 2025-07-27 16:42:06,665 | INFO     | sizes: {0: 2397478, 2: 2397740, 10: 2397768, 5844: 2433636, 5847: 2433636, 5851: 2433830}
[2025-07-27 18:42:39] 2025-07-27 16:42:06,665 | INFO     | --------------------------------------------------
[2025-07-27 18:42:39] 2025-07-27 16:42:06,665 | INFO     | 
[2025-07-27 18:42:39] 2025-07-27 16:42:06,665 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-27 18:42:39] 2025-07-27 16:42:06,681 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 18:42:39] 2025-07-27 16:42:06,681 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 18:42:39] 2025-07-27 16:42:06,682 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 18:42:39] 2025-07-27 16:42:06,682 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 18:42:39] 2025-07-27 16:42:06,682 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 18:42:39] 2025-07-27 16:42:06,682 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 18:42:39] 2025-07-27 16:42:06,682 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 18:42:39] 2025-07-27 16:42:06,682 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 18:42:39] 2025-07-27 16:42:06,682 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 18:42:39] 2025-07-27 16:42:06,682 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 18:42:39] 2025-07-27 16:42:06,682 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 18:42:39] 2025-07-27 16:42:06,682 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 18:42:39] 2025-07-27 16:42:06,682 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 18:42:39] 2025-07-27 16:42:06,682 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 18:42:39] 2025-07-27 16:42:06,682 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 18:42:39] 2025-07-27 16:42:06,682 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 18:42:39] 2025-07-27 16:42:06,682 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 18:42:39] 2025-07-27 16:42:06,682 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 18:42:39] 2025-07-27 16:42:06,682 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 18:42:39] 2025-07-27 16:42:06,682 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 18:42:39] 2025-07-27 16:42:06,682 | INFO     | job 6745775584 has completed (purged errors)
[2025-07-27 18:42:39] 2025-07-27 16:42:06,682 | INFO     | overall cleanup function is called
[2025-07-27 18:42:39] 2025-07-27 16:42:07,689 | INFO     | --- collectZombieJob: --- 10, [2987979]
[2025-07-27 18:42:39] 2025-07-27 16:42:07,689 | INFO     | zombie collector waiting for pid 2987979
[2025-07-27 18:42:39] 2025-07-27 16:42:07,689 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 18:42:39] 2025-07-27 16:42:07,689 | INFO     | collected zombie processes
[2025-07-27 18:42:39] 2025-07-27 16:42:07,689 | INFO     | will attempt to kill all subprocesses of pid=2987979
[2025-07-27 18:42:39] 2025-07-27 16:42:07,730 | INFO     | process IDs to be killed: [2987979] (in reverse order)
[2025-07-27 18:42:39] 2025-07-27 16:42:07,755 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 18:42:39] 2025-07-27 16:42:07,755 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 18:42:39] 2025-07-27 16:42:07,756 | INFO     | did not find any defunct processes belonging to 2987979
[2025-07-27 18:42:39] 2025-07-27 16:42:07,757 | INFO     | did not find any defunct processes belonging to 2987979
[2025-07-27 18:42:39] 2025-07-27 16:42:07,757 | INFO     | ready for new job
[2025-07-27 18:42:39] 2025-07-27 16:42:07,757 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 18:42:39] 2025-07-27 16:42:07,758 | INFO     | ***************************************
[2025-07-27 18:42:39] 2025-07-27 16:42:07,758 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 18:42:39] 2025-07-27 16:42:07,758 | INFO     | ***************************************
[2025-07-27 18:42:39] 2025-07-27 16:42:07,758 | INFO     | 
[2025-07-27 18:42:39] 2025-07-27 16:42:07,759 | INFO     | architecture information:
[2025-07-27 18:42:39] 2025-07-27 16:42:07,759 | INFO     | executing command: cat /etc/os-release
[2025-07-27 18:42:39] 2025-07-27 16:42:07,768 | INFO     | cat /etc/os-release:
[2025-07-27 18:42:39] NAME="CentOS Linux"
[2025-07-27 18:42:39] VERSION="7 (Core)"
[2025-07-27 18:42:39] ID="centos"
[2025-07-27 18:42:39] ID_LIKE="rhel fedora"
[2025-07-27 18:42:39] VERSION_ID="7"
[2025-07-27 18:42:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 18:42:39] ANSI_COLOR="0;31"
[2025-07-27 18:42:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 18:42:39] HOME_URL="https://www.centos.org/"
[2025-07-27 18:42:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 18:42:39] 
[2025-07-27 18:42:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 18:42:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 18:42:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 18:42:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 18:42:39] 
[2025-07-27 18:42:39] 2025-07-27 16:42:07,768 | INFO     | ***************************************
[2025-07-27 18:42:39] 2025-07-27 16:42:08,271 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-27 18:42:39] 2025-07-27 16:42:08,285 | INFO     | sufficient remaining disk space (380838608896 B)
[2025-07-27 18:42:39] 2025-07-27 16:42:08,285 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 18:42:39] 2025-07-27 16:42:08,285 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 18:42:39] 2025-07-27 16:42:08,285 | INFO     | update_server=False
[2025-07-27 18:42:39] 2025-07-27 16:42:08,285 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 18:42:39] 2025-07-27 16:42:08,285 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 18:42:39] 2025-07-27 16:42:08,317 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 18:42:39] 2025-07-27 16:42:08,426 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 18:42:39] 2025-07-27 16:42:08,427 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 18:42:39] 2025-07-27 16:42:08,427 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:42:39] 2025-07-27 16:42:08,427 | INFO     | will abort loop
[2025-07-27 18:42:39] 2025-07-27 16:42:09,212 | INFO     | all data control threads have been joined
[2025-07-27 18:42:39] 2025-07-27 16:42:09,291 | INFO     | [job] retrieve thread has finished
[2025-07-27 18:42:39] 2025-07-27 16:42:09,314 | INFO     | all payload control threads have been joined
[2025-07-27 18:42:39] 2025-07-27 16:42:09,322 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 18:42:39] 2025-07-27 16:42:09,432 | INFO     | [job] job monitor thread has finished
[2025-07-27 18:42:39] 2025-07-27 16:42:09,515 | INFO     | all job control threads have been joined
[2025-07-27 18:42:39] 2025-07-27 16:42:09,776 | INFO     | [payload] validate_post thread has finished
[2025-07-27 18:42:39] 2025-07-27 16:42:09,876 | INFO     | [payload] failed_post thread has finished
[2025-07-27 18:42:39] 2025-07-27 16:42:10,218 | INFO     | [data] control thread has finished
[2025-07-27 18:42:39] 2025-07-27 16:42:10,292 | INFO     | [data] copytool_out thread has finished
[2025-07-27 18:42:39] 2025-07-27 16:42:10,318 | INFO     | [payload] control thread has finished
[2025-07-27 18:42:39] 2025-07-27 16:42:10,353 | INFO     | [data] copytool_in thread has finished
[2025-07-27 18:42:39] 2025-07-27 16:42:10,521 | INFO     | [job] control thread has finished
[2025-07-27 18:42:39] 2025-07-27 16:42:10,649 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 18:42:39] 2025-07-27 16:42:10,686 | INFO     | [job] validate thread has finished
[2025-07-27 18:42:39] 2025-07-27 16:42:10,701 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 18:42:39] 2025-07-27 16:42:10,765 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 18:42:39] 2025-07-27 16:42:11,247 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:42:39] 2025-07-27 16:42:12,253 | INFO     | [job] queue monitor thread has finished
[2025-07-27 18:42:39] 2025-07-27 16:42:12,324 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 18:42:39] 2025-07-27 16:42:13,636 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140039662122816)>', '<ExcThread(monitor, started 140039304484608)>']
[2025-07-27 18:42:39] 2025-07-27 16:42:18,661 | INFO     | all workflow threads have been joined
[2025-07-27 18:42:39] 2025-07-27 16:42:18,662 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 18:42:39] 2025-07-27 16:42:18,662 | INFO     | traces error code: 0
[2025-07-27 18:42:39] 2025-07-27 16:42:18,662 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 18:42:39] 2025-07-27 16:42:38,888 | INFO     | PID=2981487 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 18:42:39] 2025-07-27 16:42:38,888 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 18:42:39] 2025-07-27 16:42:38,888 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 18:42:39] 2025-07-27 16:42:38,889 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 18:42:39] 2025-07-27 16:42:38,889 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 18:42:39] 2025-07-27 16:42:38,889 | INFO     | [monitor] control thread has ended
[2025-07-27 18:42:39] 2025-07-27 16:42:38,936 [wrapper] ==== pilot stdout END ====
[2025-07-27 18:42:39] 2025-07-27 16:42:38,939 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 18:42:39] 2025-07-27 16:42:38,941 [wrapper] pilotpid: 2981487
[2025-07-27 18:42:39] 2025-07-27 16:42:38,944 [wrapper] Pilot exit status: 0
[2025-07-27 18:42:39] 2025-07-27 16:42:38,952 [wrapper] pandaids: 6745775584
[2025-07-27 18:42:39] 2025-07-27 16:42:38,969 [wrapper] cleanup supervisor_pilot 3000115 2981488
[2025-07-27 18:42:39] 2025-07-27 16:42:38,971 [wrapper] Test setup, not cleaning
[2025-07-27 18:42:39] 2025-07-27 16:42:38,974 [wrapper] apfmon messages muted
[2025-07-27 18:42:39] 2025-07-27 16:42:38,977 [wrapper] ==== wrapper stdout END ====
[2025-07-27 18:42:39] 2025-07-27 16:42:38,979 [wrapper] ==== wrapper stderr END ====
[2025-07-27 18:42:39]  *** Error codes and diagnostics ***
[2025-07-27 18:42:39]     "exeErrorCode": 0,
[2025-07-27 18:42:39]     "exeErrorDiag": "",
[2025-07-27 18:42:39]     "pilotErrorCode": 0,
[2025-07-27 18:42:39]     "pilotErrorDiag": "",
[2025-07-27 18:42:39]  *** Listing of results directory ***
[2025-07-27 18:42:39] total 439652
[2025-07-27 18:42:39] -rw-r--r-- 1 boinc boinc    530466 Jul 26 23:23 pilot3.tar.gz
[2025-07-27 18:42:39] -rwx------ 1 boinc boinc     36292 Jul 26 23:34 runpilot2-wrapper.sh
[2025-07-27 18:42:39] -rw-r--r-- 1 boinc boinc      5112 Jul 26 23:34 queuedata.json
[2025-07-27 18:42:39] -rw-r--r-- 1 boinc boinc       100 Jul 27 17:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 18:42:39] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 17:04 run_atlas
[2025-07-27 18:42:39] -rw-r--r-- 1 boinc boinc       105 Jul 27 17:04 job.xml
[2025-07-27 18:42:39] -rw-r--r-- 2 boinc boinc 232892217 Jul 27 17:04 EVNT.45743347._002571.pool.root.1
[2025-07-27 18:42:39] -rw-r--r-- 1 boinc boinc      6931 Jul 27 17:04 init_data.xml
[2025-07-27 18:42:39] drwxrwx--x 2 boinc boinc      4096 Jul 27 17:04 shared
[2025-07-27 18:42:39] -rw-r--r-- 2 boinc boinc    542897 Jul 27 17:04 input.tar.gz
[2025-07-27 18:42:39] -rw-r--r-- 2 boinc boinc     15095 Jul 27 17:04 start_atlas.sh
[2025-07-27 18:42:39] -rw-r--r-- 1 boinc boinc         0 Jul 27 17:04 boinc_lockfile
[2025-07-27 18:42:39] -rw-r--r-- 1 boinc boinc      2563 Jul 27 17:04 pandaJob.out
[2025-07-27 18:42:39] -rw------- 1 boinc boinc    980109 Jul 27 17:04 agis_schedconf.cvmfs.json
[2025-07-27 18:42:39] -rw------- 1 boinc boinc   1593052 Jul 27 17:04 agis_ddmendpoints.agis.ALL.json
[2025-07-27 18:42:39] drwx------ 4 boinc boinc      4096 Jul 27 17:04 pilot3
[2025-07-27 18:42:39] -rw------- 1 boinc boinc 211839231 Jul 27 18:41 HITS.45743349._044951.pool.root.1
[2025-07-27 18:42:39] -rw-r--r-- 1 boinc boinc       529 Jul 27 18:41 boinc_task_state.xml
[2025-07-27 18:42:39] -rw------- 1 boinc boinc        95 Jul 27 18:41 pilot_heartbeat.json
[2025-07-27 18:42:39] -rw------- 1 boinc boinc      1015 Jul 27 18:41 memory_monitor_summary.json
[2025-07-27 18:42:39] -rw------- 1 boinc boinc    231456 Jul 27 18:41 log.45743349._044951.job.log.tgz.1
[2025-07-27 18:42:39] -rw------- 1 boinc boinc      7750 Jul 27 18:42 heartbeat.json
[2025-07-27 18:42:39] -rw-r--r-- 1 boinc boinc        27 Jul 27 18:42 wrapper_checkpoint.txt
[2025-07-27 18:42:39] -rw-r--r-- 1 boinc boinc      8192 Jul 27 18:42 boinc_mmap_file
[2025-07-27 18:42:39] -rw------- 1 boinc boinc       747 Jul 27 18:42 pilotlog.txt
[2025-07-27 18:42:39] -rw------- 1 boinc boinc    563813 Jul 27 18:42 log.45743349._044951.job.log.1
[2025-07-27 18:42:39] -rw------- 1 boinc boinc       357 Jul 27 18:42 output.list
[2025-07-27 18:42:39] -rw-r--r-- 1 boinc boinc       620 Jul 27 18:42 runtime_log
[2025-07-27 18:42:39] -rw------- 1 boinc boinc    819200 Jul 27 18:42 result.tar.gz
[2025-07-27 18:42:39] -rw------- 1 boinc boinc       661 Jul 27 18:42 wcONDm9h1z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmMU1KDm4lRXbm.diag
[2025-07-27 18:42:39] -rw-r--r-- 1 boinc boinc      8749 Jul 27 18:42 runtime_log.err
[2025-07-27 18:42:39] -rw-r--r-- 1 boinc boinc     21825 Jul 27 18:42 stderr.txt
[2025-07-27 18:42:39] HITS file was successfully produced:
[2025-07-27 18:42:39] -rw------- 1 boinc boinc 211839231 Jul 27 18:41 shared/HITS.pool.root.1
[2025-07-27 18:42:39]  *** Contents of shared directory: ***
[2025-07-27 18:42:39] total 435668
[2025-07-27 18:42:39] -rw-r--r-- 2 boinc boinc 232892217 Jul 27 17:04 ATLAS.root_0
[2025-07-27 18:42:39] -rw-r--r-- 2 boinc boinc    542897 Jul 27 17:04 input.tar.gz
[2025-07-27 18:42:39] -rw-r--r-- 2 boinc boinc     15095 Jul 27 17:04 start_atlas.sh
[2025-07-27 18:42:39] -rw------- 1 boinc boinc 211839231 Jul 27 18:41 HITS.pool.root.1
[2025-07-27 18:42:39] -rw------- 1 boinc boinc    819200 Jul 27 18:42 result.tar.gz
18:42:40 (2977844): run_atlas exited; CPU time 16959.294240
18:42:40 (2977844): called boinc_finish(0)

</stderr_txt>
]]>

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