Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:33:29 (2787607): wrapper (7.7.26015): starting
22:33:29 (2787607): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 22:33:29] Arguments: --nthreads 8
[2025-07-26 22:33:29] Threads: 8
[2025-07-26 22:33:29] Checking for CVMFS
[2025-07-26 22:33:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 22:33:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 22:33:29] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 22:33:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 22:33:29] 2.13.1.0 3153527 7777 143756 148797 2 188 22172125 40960001 12841 16776704 0 105039420 99.999 279686 58831 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 22:33:29] CVMFS is ok
[2025-07-26 22:33:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 22:33:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 22:33:29] Further information can be found at the LHC@home message board.
[2025-07-26 22:33:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 22:33:29] Checking for apptainer binary...
[2025-07-26 22:33:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 22:33:29] Running /usr/bin/apptainer --version
[2025-07-26 22:33:29] apptainer version 1.4.1-1.el9
[2025-07-26 22:33:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 22:33:29] c-208-37.aglt2.org
[2025-07-26 22:33:29] apptainer works
[2025-07-26 22:33:29] Set ATHENA_PROC_NUMBER=8
[2025-07-26 22:33:29] Set ATHENA_CORE_NUMBER=8
[2025-07-26 22:33:29] Starting ATLAS job with PandaID=6745354375
[2025-07-26 22:33:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 23:29:29]  *** The last 200 lines of the pilot log: ***
[2025-07-26 23:29:29]  is_tar=False
[2025-07-26 23:29:29]  lfn=log.45743349._042552.job.log.tgz.1
[2025-07-26 23:29:29]  mtime=0
[2025-07-26 23:29:29]  protocol_id=None
[2025-07-26 23:29:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 23:29:29]  replicas=None
[2025-07-26 23:29:29]  scope=mc23_13p6TeV
[2025-07-26 23:29:29]  status=None
[2025-07-26 23:29:29]  status_code=0
[2025-07-26 23:29:29]  storage_token=
[2025-07-26 23:29:29]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-6745354375/log.45743349._042552.job.log.tgz.1
[2025-07-26 23:29:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/31/a0/log.45743349._042552.job.log.tgz.1
[2025-07-26 23:29:29]  workdir=None
[2025-07-26 23:29:29] ]
[2025-07-26 23:29:29] 2025-07-27 03:28:51,685 | INFO     | transferring file log.45743349._042552.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-6745354375/log.45743349._042552.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 23:29:29] 2025-07-27 03:28:51,685 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-6745354375/log.45743349._042552.job.log.tgz.1 /tmp/boinchome/slots/5/log.45743349._042552.job
[2025-07-26 23:29:29] 2025-07-27 03:28:51,704 | INFO     | adding to output.list: log.45743349._042552.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/31/a0/log.45743349._042552.job.log.tg
[2025-07-26 23:29:29] 2025-07-27 03:28:51,705 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 23:29:29] 2025-07-27 03:28:51,705 | INFO     | summary of transferred files:
[2025-07-26 23:29:29] 2025-07-27 03:28:51,705 | INFO     |  -- lfn=log.45743349._042552.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 23:29:29] 2025-07-27 03:28:51,705 | INFO     | stage-out finished correctly
[2025-07-26 23:29:29] 2025-07-27 03:28:51,761 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 23:29:29] 2025-07-27 03:28:53,735 | INFO     | job 6745354375 has state=finished
[2025-07-26 23:29:29] 2025-07-27 03:28:53,735 | INFO     | preparing for final server update for job 6745354375 in state='finished'
[2025-07-26 23:29:29] 2025-07-27 03:28:53,736 | INFO     | this job has now completed (state=finished)
[2025-07-26 23:29:29] 2025-07-27 03:28:53,736 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 23:29:29] 2025-07-27 03:28:53,736 | INFO     | log transfer has been attempted: DONE
[2025-07-26 23:29:29] 2025-07-27 03:28:53,736 | INFO     | job 6745354375 has finished - writing final server update
[2025-07-26 23:29:29] 2025-07-27 03:28:53,736 | INFO     | total number of processed events: 400 (read)
[2025-07-26 23:29:29] 2025-07-27 03:28:53,736 | INFO     | executing command: lscpu
[2025-07-26 23:29:29] 2025-07-27 03:28:53,791 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 23:29:29] 2025-07-27 03:28:53,972 | INFO     | 3317s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-26 23:29:29] 2025-07-27 03:28:55,340 | WARNING  | process 2797730 can no longer be monitored (due to stat problems) - aborting
[2025-07-26 23:29:29] 2025-07-27 03:28:55,340 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6745354375/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 23:29:29] 2025-07-27 03:28:55,662 | INFO     | number of running child processes to parent process 2797730: 1
[2025-07-26 23:29:29] 2025-07-27 03:28:55,662 | INFO     | maximum number of monitored processes: 6
[2025-07-26 23:29:29] 2025-07-27 03:28:57,460 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 23:29:29] 2025-07-27 03:28:57,465 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3757.223656250002
[2025-07-26 23:29:29] 2025-07-27 03:28:57,478 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6745354375/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 23:29:29] 2025-07-27 03:28:57,479 | INFO     | extracted standard info from prmon json
[2025-07-26 23:29:29] 2025-07-27 03:28:57,479 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 23:29:29] 2025-07-27 03:28:57,479 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 23:29:29] 2025-07-27 03:28:57,479 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 23:29:29] 2025-07-27 03:28:57,479 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 23:29:29] 2025-07-27 03:28:57,480 | INFO     | fitting pss+swap vs Time
[2025-07-26 23:29:29] 2025-07-27 03:28:57,480 | INFO     | sum of square deviations: 32179208.0
[2025-07-26 23:29:29] 2025-07-27 03:28:57,480 | INFO     | sum of deviations: -165477078.99999997
[2025-07-26 23:29:29] 2025-07-27 03:28:57,480 | INFO     | mean x: 1753585352.0
[2025-07-26 23:29:29] 2025-07-27 03:28:57,480 | INFO     | mean y: 2543023.787234043
[2025-07-26 23:29:29] 2025-07-27 03:28:57,480 | INFO     | -- intersect: 9020110573.1858
[2025-07-26 23:29:29] 2025-07-27 03:28:57,480 | INFO     | intersect: 9020110573.1858
[2025-07-26 23:29:29] 2025-07-27 03:28:57,481 | INFO     | chi2: 0.0003897352985659764
[2025-07-26 23:29:29] 2025-07-27 03:28:57,481 | INFO     | -- intersect: 9020110573.1858
[2025-07-26 23:29:29] 2025-07-27 03:28:57,481 | INFO     | current memory leak: -5.14 B/s (using 47 data points, chi2=0.00)
[2025-07-26 23:29:29] 2025-07-27 03:28:57,481 | INFO     | could have reported an average CPU frequency of 3767 MHz (5 samples)
[2025-07-26 23:29:29] 2025-07-27 03:28:57,481 | INFO     | ..............................
[2025-07-26 23:29:29] 2025-07-27 03:28:57,481 | INFO     | . Timing measurements:
[2025-07-26 23:29:29] 2025-07-27 03:28:57,481 | INFO     | . get job = 0 s
[2025-07-26 23:29:29] 2025-07-27 03:28:57,481 | INFO     | . initial setup = 2 s
[2025-07-26 23:29:29] 2025-07-27 03:28:57,481 | INFO     | . payload setup = 5 s
[2025-07-26 23:29:29] 2025-07-27 03:28:57,481 | INFO     | . stage-in = 0 s
[2025-07-26 23:29:29] 2025-07-27 03:28:57,481 | INFO     | . payload execution = 3288 s
[2025-07-26 23:29:29] 2025-07-27 03:28:57,481 | INFO     | . stage-out = 0 s
[2025-07-26 23:29:29] 2025-07-27 03:28:57,481 | INFO     | . log creation = 0 s
[2025-07-26 23:29:29] 2025-07-27 03:28:57,481 | INFO     | ..............................
[2025-07-26 23:29:29] 2025-07-27 03:28:57,539 | INFO     | 
[2025-07-26 23:29:29] 2025-07-27 03:28:57,540 | INFO     | job summary report
[2025-07-26 23:29:29] 2025-07-27 03:28:57,540 | INFO     | --------------------------------------------------
[2025-07-26 23:29:29] 2025-07-27 03:28:57,540 | INFO     | PanDA job id: 6745354375
[2025-07-26 23:29:29] 2025-07-27 03:28:57,540 | INFO     | task id: 45743349
[2025-07-26 23:29:29] 2025-07-27 03:28:57,540 | INFO     | errors: (none)
[2025-07-26 23:29:29] 2025-07-27 03:28:57,540 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 23:29:29] 2025-07-27 03:28:57,540 | INFO     | pilot state: finished 
[2025-07-26 23:29:29] 2025-07-27 03:28:57,540 | INFO     | transexitcode: 0
[2025-07-26 23:29:29] 2025-07-27 03:28:57,540 | INFO     | exeerrorcode: 0
[2025-07-26 23:29:29] 2025-07-27 03:28:57,540 | INFO     | exeerrordiag: 
[2025-07-26 23:29:29] 2025-07-27 03:28:57,540 | INFO     | exitcode: 0
[2025-07-26 23:29:29] 2025-07-27 03:28:57,540 | INFO     | exitmsg: OK
[2025-07-26 23:29:29] 2025-07-27 03:28:57,540 | INFO     | cpuconsumptiontime: 24758 s
[2025-07-26 23:29:29] 2025-07-27 03:28:57,540 | INFO     | nevents: 400
[2025-07-26 23:29:29] 2025-07-27 03:28:57,540 | INFO     | neventsw: 0
[2025-07-26 23:29:29] 2025-07-27 03:28:57,540 | INFO     | pid: 2797730
[2025-07-26 23:29:29] 2025-07-27 03:28:57,540 | INFO     | pgrp: 2797730
[2025-07-26 23:29:29] 2025-07-27 03:28:57,540 | INFO     | corecount: 8
[2025-07-26 23:29:29] 2025-07-27 03:28:57,540 | INFO     | event service: False
[2025-07-26 23:29:29] 2025-07-27 03:28:57,540 | INFO     | sizes: {0: 2397475, 4: 2397737, 11: 2397765, 3297: 2423317, 3298: 2432371, 3304: 2432541}
[2025-07-26 23:29:29] 2025-07-27 03:28:57,540 | INFO     | --------------------------------------------------
[2025-07-26 23:29:29] 2025-07-27 03:28:57,541 | INFO     | 
[2025-07-26 23:29:29] 2025-07-27 03:28:57,541 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-07-26 23:29:29] 2025-07-27 03:28:57,558 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 23:29:29] 2025-07-27 03:28:57,558 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 23:29:29] 2025-07-27 03:28:57,558 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 23:29:29] 2025-07-27 03:28:57,558 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 23:29:29] 2025-07-27 03:28:57,558 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 23:29:29] 2025-07-27 03:28:57,558 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 23:29:29] 2025-07-27 03:28:57,558 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 23:29:29] 2025-07-27 03:28:57,558 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 23:29:29] 2025-07-27 03:28:57,558 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 23:29:29] 2025-07-27 03:28:57,558 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 23:29:29] 2025-07-27 03:28:57,559 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 23:29:29] 2025-07-27 03:28:57,559 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 23:29:29] 2025-07-27 03:28:57,559 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 23:29:29] 2025-07-27 03:28:57,559 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 23:29:29] 2025-07-27 03:28:57,559 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 23:29:29] 2025-07-27 03:28:57,559 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 23:29:29] 2025-07-27 03:28:57,559 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 23:29:29] 2025-07-27 03:28:57,559 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 23:29:29] 2025-07-27 03:28:57,559 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 23:29:29] 2025-07-27 03:28:57,559 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 23:29:29] 2025-07-27 03:28:57,559 | INFO     | job 6745354375 has completed (purged errors)
[2025-07-26 23:29:29] 2025-07-27 03:28:57,559 | INFO     | overall cleanup function is called
[2025-07-26 23:29:29] 2025-07-27 03:28:58,570 | INFO     | --- collectZombieJob: --- 10, [2797730]
[2025-07-26 23:29:29] 2025-07-27 03:28:58,571 | INFO     | zombie collector waiting for pid 2797730
[2025-07-26 23:29:29] 2025-07-27 03:28:58,571 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 23:29:29] 2025-07-27 03:28:58,571 | INFO     | collected zombie processes
[2025-07-26 23:29:29] 2025-07-27 03:28:58,571 | INFO     | will attempt to kill all subprocesses of pid=2797730
[2025-07-26 23:29:29] 2025-07-27 03:28:58,920 | INFO     | process IDs to be killed: [2797730] (in reverse order)
[2025-07-26 23:29:29] 2025-07-27 03:28:59,040 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 23:29:29] 2025-07-27 03:28:59,041 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 23:29:29] 2025-07-27 03:28:59,057 | INFO     | did not find any defunct processes belonging to 2797730
[2025-07-26 23:29:29] 2025-07-27 03:28:59,071 | INFO     | did not find any defunct processes belonging to 2797730
[2025-07-26 23:29:29] 2025-07-27 03:28:59,071 | INFO     | ready for new job
[2025-07-26 23:29:29] 2025-07-27 03:28:59,071 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 23:29:29] 2025-07-27 03:28:59,072 | INFO     | ***************************************
[2025-07-26 23:29:29] 2025-07-27 03:28:59,072 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 23:29:29] 2025-07-27 03:28:59,072 | INFO     | ***************************************
[2025-07-26 23:29:29] 2025-07-27 03:28:59,073 | INFO     | 
[2025-07-26 23:29:29] 2025-07-27 03:28:59,077 | INFO     | architecture information:
[2025-07-26 23:29:29] 2025-07-27 03:28:59,077 | INFO     | executing command: cat /etc/os-release
[2025-07-26 23:29:29] 2025-07-27 03:28:59,093 | INFO     | cat /etc/os-release:
[2025-07-26 23:29:29] NAME="CentOS Linux"
[2025-07-26 23:29:29] VERSION="7 (Core)"
[2025-07-26 23:29:29] ID="centos"
[2025-07-26 23:29:29] ID_LIKE="rhel fedora"
[2025-07-26 23:29:29] VERSION_ID="7"
[2025-07-26 23:29:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 23:29:29] ANSI_COLOR="0;31"
[2025-07-26 23:29:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 23:29:29] HOME_URL="https://www.centos.org/"
[2025-07-26 23:29:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 23:29:29] 
[2025-07-26 23:29:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 23:29:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 23:29:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 23:29:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 23:29:29] 
[2025-07-26 23:29:29] 2025-07-27 03:28:59,093 | INFO     | ***************************************
[2025-07-26 23:29:29] 2025-07-27 03:28:59,594 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-07-26 23:29:29] 2025-07-27 03:28:59,611 | INFO     | sufficient remaining disk space (166671155200 B)
[2025-07-26 23:29:29] 2025-07-27 03:28:59,611 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 23:29:29] 2025-07-27 03:28:59,611 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 23:29:29] 2025-07-27 03:28:59,611 | INFO     | update_server=False
[2025-07-26 23:29:29] 2025-07-27 03:28:59,611 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 23:29:29] 2025-07-27 03:28:59,611 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:29:29] 2025-07-27 03:28:59,611 | INFO     | aborting loop
[2025-07-26 23:29:29] 2025-07-27 03:28:59,772 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 23:29:29] 2025-07-27 03:28:59,786 | INFO     | all data control threads have been joined
[2025-07-26 23:29:29] 2025-07-27 03:29:00,556 | INFO     | all job control threads have been joined
[2025-07-26 23:29:29] 2025-07-27 03:29:00,617 | INFO     | [job] job monitor thread has finished
[2025-07-26 23:29:29] 2025-07-27 03:29:00,617 | INFO     | [job] retrieve thread has finished
[2025-07-26 23:29:29] 2025-07-27 03:29:00,624 | INFO     | [job] validate thread has finished
[2025-07-26 23:29:29] 2025-07-27 03:29:00,743 | INFO     | all payload control threads have been joined
[2025-07-26 23:29:29] 2025-07-27 03:29:00,772 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 23:29:29] 2025-07-27 03:29:00,792 | INFO     | [data] control thread has finished
[2025-07-26 23:29:29] 2025-07-27 03:29:00,948 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 23:29:29] 2025-07-27 03:29:01,074 | INFO     | [payload] failed_post thread has finished
[2025-07-26 23:29:29] 2025-07-27 03:29:01,189 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 23:29:29] 2025-07-27 03:29:01,561 | INFO     | [job] control thread has finished
[2025-07-26 23:29:29] 2025-07-27 03:29:01,718 | INFO     | [data] copytool_in thread has finished
[2025-07-26 23:29:29] 2025-07-27 03:29:01,749 | INFO     | [payload] control thread has finished
[2025-07-26 23:29:29] 2025-07-27 03:29:01,780 | INFO     | [data] copytool_out thread has finished
[2025-07-26 23:29:29] 2025-07-27 03:29:01,814 | INFO     | [payload] validate_post thread has finished
[2025-07-26 23:29:29] 2025-07-27 03:29:02,328 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 23:29:29] 2025-07-27 03:29:02,550 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:29:29] 2025-07-27 03:29:03,554 | INFO     | [job] queue monitor thread has finished
[2025-07-26 23:29:29] 2025-07-27 03:29:06,333 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 23:29:29] 2025-07-27 03:29:10,353 | INFO     | job.realtimelogging is not enabled
[2025-07-26 23:29:29] 2025-07-27 03:29:11,354 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 23:29:29] 2025-07-27 03:29:13,310 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140522547222336)>', '<ExcThread(monitor, started 140521934681856)>']
[2025-07-26 23:29:29] 2025-07-27 03:29:18,336 | INFO     | all workflow threads have been joined
[2025-07-26 23:29:29] 2025-07-27 03:29:18,336 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 23:29:29] 2025-07-27 03:29:18,336 | INFO     | traces error code: 0
[2025-07-26 23:29:29] 2025-07-27 03:29:18,336 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 23:29:29] 2025-07-27 03:29:29,492 | INFO     | PID=2791220 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 23:29:29] 2025-07-27 03:29:29,492 | INFO     | .. there are 15 such processes running
[2025-07-26 23:29:29] 2025-07-27 03:29:29,492 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 23:29:29] 2025-07-27 03:29:29,492 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 23:29:29] 2025-07-27 03:29:29,492 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 23:29:29] 2025-07-27 03:29:29,492 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 23:29:29] 2025-07-27 03:29:29,492 | INFO     | [monitor] control thread has ended
[2025-07-26 23:29:29] 2025-07-27 03:29:29,572 [wrapper] ==== pilot stdout END ====
[2025-07-26 23:29:29] 2025-07-27 03:29:29,576 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 23:29:29] 2025-07-27 03:29:29,579 [wrapper] pilotpid: 2791220
[2025-07-26 23:29:29] 2025-07-27 03:29:29,582 [wrapper] Pilot exit status: 0
[2025-07-26 23:29:29] 2025-07-27 03:29:29,593 [wrapper] pandaids: 6745354375
[2025-07-26 23:29:29] 2025-07-27 03:29:29,675 [wrapper] cleanup supervisor_pilot 3044415 2791221
[2025-07-26 23:29:29] 2025-07-27 03:29:29,679 [wrapper] Test setup, not cleaning
[2025-07-26 23:29:29] 2025-07-27 03:29:29,682 [wrapper] apfmon messages muted
[2025-07-26 23:29:29] 2025-07-27 03:29:29,685 [wrapper] ==== wrapper stdout END ====
[2025-07-26 23:29:29] 2025-07-27 03:29:29,688 [wrapper] ==== wrapper stderr END ====
[2025-07-26 23:29:29]  *** Error codes and diagnostics ***
[2025-07-26 23:29:29]     "exeErrorCode": 0,
[2025-07-26 23:29:29]     "exeErrorDiag": "",
[2025-07-26 23:29:29]     "pilotErrorCode": 0,
[2025-07-26 23:29:29]     "pilotErrorDiag": "",
[2025-07-26 23:29:29]  *** Listing of results directory ***
[2025-07-26 23:29:29] total 352080
[2025-07-26 23:29:29] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 14:40 pilot3.tar.gz
[2025-07-26 23:29:29] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 14:50 queuedata.json
[2025-07-26 23:29:29] -rwx------. 1 boincer umatlas     36292 Jul 26 14:51 runpilot2-wrapper.sh
[2025-07-26 23:29:29] -rw-r--r--. 1 boincer umatlas       100 Jul 26 22:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 23:29:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 22:33 run_atlas
[2025-07-26 23:29:29] -rw-r--r--. 1 boincer umatlas       105 Jul 26 22:33 job.xml
[2025-07-26 23:29:29] -rw-r--r--. 2 boincer umatlas 143932545 Jul 26 22:33 EVNT.45743347._002401.pool.root.1
[2025-07-26 23:29:29] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 22:33 start_atlas.sh
[2025-07-26 23:29:29] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 22:33 shared
[2025-07-26 23:29:29] -rw-r--r--. 2 boincer umatlas    542893 Jul 26 22:33 input.tar.gz
[2025-07-26 23:29:29] -rw-r--r--. 1 boincer umatlas         0 Jul 26 22:33 boinc_lockfile
[2025-07-26 23:29:29] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 22:33 pandaJob.out
[2025-07-26 23:29:29] -rw-------. 1 boincer umatlas    980117 Jul 26 22:33 agis_schedconf.cvmfs.json
[2025-07-26 23:29:29] -rw-------. 1 boincer umatlas   1593052 Jul 26 22:33 agis_ddmendpoints.agis.ALL.json
[2025-07-26 23:29:29] drwx------. 4 boincer umatlas      4096 Jul 26 22:33 pilot3
[2025-07-26 23:29:29] -rw-------. 1 boincer umatlas 211459242 Jul 26 23:28 HITS.45743349._042552.pool.root.1
[2025-07-26 23:29:29] -rw-r--r--. 1 boincer umatlas       529 Jul 26 23:28 boinc_task_state.xml
[2025-07-26 23:29:29] -rw-------. 1 boincer umatlas      1025 Jul 26 23:28 memory_monitor_summary.json
[2025-07-26 23:29:29] -rw-------. 1 boincer umatlas        95 Jul 26 23:28 pilot_heartbeat.json
[2025-07-26 23:29:29] -rw-------. 1 boincer umatlas    290228 Jul 26 23:28 log.45743349._042552.job.log.tgz.1
[2025-07-26 23:29:29] -rw-------. 1 boincer umatlas      7760 Jul 26 23:28 heartbeat.json
[2025-07-26 23:29:29] -rw-r--r--. 1 boincer umatlas      7174 Jul 26 23:29 init_data.xml
[2025-07-26 23:29:29] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 23:29 boinc_mmap_file
[2025-07-26 23:29:29] -rw-r--r--. 1 boincer umatlas        27 Jul 26 23:29 wrapper_checkpoint.txt
[2025-07-26 23:29:29] -rw-------. 1 boincer umatlas       823 Jul 26 23:29 pilotlog.txt
[2025-07-26 23:29:29] -rw-------. 1 boincer umatlas    342586 Jul 26 23:29 log.45743349._042552.job.log.1
[2025-07-26 23:29:29] -rw-------. 1 boincer umatlas       357 Jul 26 23:29 output.list
[2025-07-26 23:29:29] -rw-r--r--. 1 boincer umatlas       620 Jul 26 23:29 runtime_log
[2025-07-26 23:29:29] -rw-------. 1 boincer umatlas    655360 Jul 26 23:29 result.tar.gz
[2025-07-26 23:29:29] -rw-r--r--. 1 boincer umatlas      8660 Jul 26 23:29 runtime_log.err
[2025-07-26 23:29:29] -rw-------. 1 boincer umatlas       651 Jul 26 23:29 3zeKDmQAzz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5qSLDmdGPnQo.diag
[2025-07-26 23:29:29] -rw-r--r--. 1 boincer umatlas     21559 Jul 26 23:29 stderr.txt
[2025-07-26 23:29:29] HITS file was successfully produced:
[2025-07-26 23:29:29] -rw-------. 1 boincer umatlas 211459242 Jul 26 23:28 shared/HITS.pool.root.1
[2025-07-26 23:29:29]  *** Contents of shared directory: ***
[2025-07-26 23:29:29] total 348256
[2025-07-26 23:29:29] -rw-r--r--. 2 boincer umatlas 143932545 Jul 26 22:33 ATLAS.root_0
[2025-07-26 23:29:29] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 22:33 start_atlas.sh
[2025-07-26 23:29:29] -rw-r--r--. 2 boincer umatlas    542893 Jul 26 22:33 input.tar.gz
[2025-07-26 23:29:29] -rw-------. 1 boincer umatlas 211459242 Jul 26 23:28 HITS.pool.root.1
[2025-07-26 23:29:29] -rw-------. 1 boincer umatlas    655360 Jul 26 23:29 result.tar.gz
23:29:31 (2787607): run_atlas exited; CPU time 24837.170500
23:29:31 (2787607): called boinc_finish(0)

</stderr_txt>
]]>

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