Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:48:05 (464530): wrapper (7.7.26015): starting
23:48:05 (464530): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 23:48:05] Arguments: --nthreads 12
[2025-07-26 23:48:05] Threads: 12
[2025-07-26 23:48:05] Checking for CVMFS
[2025-07-26 23:48:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 23:48:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 23:48:05] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 23:48:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 23:48:05] 2.12.6.0 418423 17845 311728 148799 1 64 21287533 32935937 9806 16776704 0 31979295 99.645 53138378 33451 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 23:48:05] CVMFS is ok
[2025-07-26 23:48:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 23:48:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 23:48:05] Further information can be found at the LHC@home message board.
[2025-07-26 23:48:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 23:48:05] Checking for apptainer binary...
[2025-07-26 23:48:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 23:48:05] Running /usr/bin/apptainer --version
[2025-07-26 23:48:05] apptainer version 1.4.1-1.el9
[2025-07-26 23:48:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 23:48:05] c6-1-26-2.aglt2.org
[2025-07-26 23:48:05] apptainer works
[2025-07-26 23:48:05] Set ATHENA_PROC_NUMBER=12
[2025-07-26 23:48:05] Set ATHENA_CORE_NUMBER=12
[2025-07-26 23:48:05] Starting ATLAS job with PandaID=6745736065
[2025-07-26 23:48:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 01:01:01]  *** The last 200 lines of the pilot log: ***
[2025-07-27 01:01:01]  is_altstaged=None
[2025-07-27 01:01:01]  is_tar=False
[2025-07-27 01:01:01]  lfn=log.45743349._044660.job.log.tgz.1
[2025-07-27 01:01:01]  mtime=0
[2025-07-27 01:01:01]  protocol_id=None
[2025-07-27 01:01:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 01:01:01]  replicas=None
[2025-07-27 01:01:01]  scope=mc23_13p6TeV
[2025-07-27 01:01:01]  status=None
[2025-07-27 01:01:01]  status_code=0
[2025-07-27 01:01:01]  storage_token=
[2025-07-27 01:01:01]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745736065/log.45743349._044660.job.log.tgz.1
[2025-07-27 01:01:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a5/16/log.45743349._044660.job.log.tgz.1
[2025-07-27 01:01:01]  workdir=None
[2025-07-27 01:01:01] ]
[2025-07-27 01:01:01] 2025-07-27 05:00:23,348 | INFO     | transferring file log.45743349._044660.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745736065/log.45743349._044660.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 01:01:01] 2025-07-27 05:00:23,348 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745736065/log.45743349._044660.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._044660.job
[2025-07-27 01:01:01] 2025-07-27 05:00:23,369 | INFO     | adding to output.list: log.45743349._044660.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a5/16/log.45743349._044660.job.log.tg
[2025-07-27 01:01:01] 2025-07-27 05:00:23,370 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 01:01:01] 2025-07-27 05:00:23,370 | INFO     | summary of transferred files:
[2025-07-27 01:01:01] 2025-07-27 05:00:23,370 | INFO     |  -- lfn=log.45743349._044660.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 01:01:01] 2025-07-27 05:00:23,371 | INFO     | stage-out finished correctly
[2025-07-27 01:01:01] 2025-07-27 05:00:24,314 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 01:01:01] 2025-07-27 05:00:24,388 | INFO     | job 6745736065 has state=finished
[2025-07-27 01:01:01] 2025-07-27 05:00:24,388 | INFO     | preparing for final server update for job 6745736065 in state='finished'
[2025-07-27 01:01:01] 2025-07-27 05:00:24,389 | INFO     | this job has now completed (state=finished)
[2025-07-27 01:01:01] 2025-07-27 05:00:24,389 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 01:01:01] 2025-07-27 05:00:24,389 | INFO     | log transfer has been attempted: DONE
[2025-07-27 01:01:01] 2025-07-27 05:00:24,389 | INFO     | job 6745736065 has finished - writing final server update
[2025-07-27 01:01:01] 2025-07-27 05:00:24,389 | INFO     | total number of processed events: 400 (read)
[2025-07-27 01:01:01] 2025-07-27 05:00:24,390 | INFO     | executing command: lscpu
[2025-07-27 01:01:01] 2025-07-27 05:00:24,441 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 01:01:01] 2025-07-27 05:00:24,460 | INFO     | monitor loop #323: job 0:6745736065 is in state 'finished'
[2025-07-27 01:01:01] 2025-07-27 05:00:24,461 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 01:01:01] 2025-07-27 05:00:26,964 | INFO     | monitor loop #324: job 0:6745736065 is in state 'finished'
[2025-07-27 01:01:01] 2025-07-27 05:00:26,964 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 01:01:01] 2025-07-27 05:00:28,615 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 01:01:01] 2025-07-27 05:00:28,618 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2646.2324107142854
[2025-07-27 01:01:01] 2025-07-27 05:00:28,627 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745736065/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 01:01:01] 2025-07-27 05:00:28,627 | INFO     | extracted standard info from prmon json
[2025-07-27 01:01:01] 2025-07-27 05:00:28,627 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 01:01:01] 2025-07-27 05:00:28,628 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 01:01:01] 2025-07-27 05:00:28,628 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 01:01:01] 2025-07-27 05:00:28,628 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 01:01:01] 2025-07-27 05:00:28,630 | INFO     | fitting pss+swap vs Time
[2025-07-27 01:01:01] 2025-07-27 05:00:28,630 | INFO     | sum of square deviations: 81266640.0
[2025-07-27 01:01:01] 2025-07-27 05:00:28,630 | INFO     | sum of deviations: -7923259469.5
[2025-07-27 01:01:01] 2025-07-27 05:00:28,630 | INFO     | mean x: 1753590353.5
[2025-07-27 01:01:01] 2025-07-27 05:00:28,630 | INFO     | mean y: 2511439.328125
[2025-07-27 01:01:01] 2025-07-27 05:00:28,631 | INFO     | -- intersect: 170972436786.21988
[2025-07-27 01:01:01] 2025-07-27 05:00:28,631 | INFO     | intersect: 170972436786.21988
[2025-07-27 01:01:01] 2025-07-27 05:00:28,631 | INFO     | chi2: 0.17730196001876553
[2025-07-27 01:01:01] 2025-07-27 05:00:28,631 | INFO     | -- intersect: 170972436786.21988
[2025-07-27 01:01:01] 2025-07-27 05:00:28,631 | INFO     | current memory leak: -97.50 B/s (using 64 data points, chi2=0.18)
[2025-07-27 01:01:01] 2025-07-27 05:00:28,631 | INFO     | could have reported an average CPU frequency of 2692 MHz (6 samples)
[2025-07-27 01:01:01] 2025-07-27 05:00:28,631 | INFO     | ..............................
[2025-07-27 01:01:01] 2025-07-27 05:00:28,631 | INFO     | . Timing measurements:
[2025-07-27 01:01:01] 2025-07-27 05:00:28,632 | INFO     | . get job = 0 s
[2025-07-27 01:01:01] 2025-07-27 05:00:28,632 | INFO     | . initial setup = 2 s
[2025-07-27 01:01:01] 2025-07-27 05:00:28,632 | INFO     | . payload setup = 7 s
[2025-07-27 01:01:01] 2025-07-27 05:00:28,632 | INFO     | . stage-in = 0 s
[2025-07-27 01:01:01] 2025-07-27 05:00:28,632 | INFO     | . payload execution = 4297 s
[2025-07-27 01:01:01] 2025-07-27 05:00:28,632 | INFO     | . stage-out = 0 s
[2025-07-27 01:01:01] 2025-07-27 05:00:28,632 | INFO     | . log creation = 0 s
[2025-07-27 01:01:01] 2025-07-27 05:00:28,632 | INFO     | ..............................
[2025-07-27 01:01:01] 2025-07-27 05:00:28,763 | INFO     | 
[2025-07-27 01:01:01] 2025-07-27 05:00:28,764 | INFO     | job summary report
[2025-07-27 01:01:01] 2025-07-27 05:00:28,764 | INFO     | --------------------------------------------------
[2025-07-27 01:01:01] 2025-07-27 05:00:28,764 | INFO     | PanDA job id: 6745736065
[2025-07-27 01:01:01] 2025-07-27 05:00:28,764 | INFO     | task id: 45743349
[2025-07-27 01:01:01] 2025-07-27 05:00:28,764 | INFO     | errors: (none)
[2025-07-27 01:01:01] 2025-07-27 05:00:28,764 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 01:01:01] 2025-07-27 05:00:28,764 | INFO     | pilot state: finished 
[2025-07-27 01:01:01] 2025-07-27 05:00:28,764 | INFO     | transexitcode: 0
[2025-07-27 01:01:01] 2025-07-27 05:00:28,764 | INFO     | exeerrorcode: 0
[2025-07-27 01:01:01] 2025-07-27 05:00:28,764 | INFO     | exeerrordiag: 
[2025-07-27 01:01:01] 2025-07-27 05:00:28,764 | INFO     | exitcode: 0
[2025-07-27 01:01:01] 2025-07-27 05:00:28,764 | INFO     | exitmsg: OK
[2025-07-27 01:01:01] 2025-07-27 05:00:28,765 | INFO     | cpuconsumptiontime: 45719 s
[2025-07-27 01:01:01] 2025-07-27 05:00:28,765 | INFO     | nevents: 400
[2025-07-27 01:01:01] 2025-07-27 05:00:28,765 | INFO     | neventsw: 0
[2025-07-27 01:01:01] 2025-07-27 05:00:28,765 | INFO     | pid: 475014
[2025-07-27 01:01:01] 2025-07-27 05:00:28,765 | INFO     | pgrp: 475014
[2025-07-27 01:01:01] 2025-07-27 05:00:28,765 | INFO     | corecount: 12
[2025-07-27 01:01:01] 2025-07-27 05:00:28,765 | INFO     | event service: False
[2025-07-27 01:01:01] 2025-07-27 05:00:28,765 | INFO     | sizes: {0: 2397304, 1: 2397503, 6: 2397765, 11: 2397793, 4308: 2423783, 4310: 2432965, 4315: 2433103}
[2025-07-27 01:01:01] 2025-07-27 05:00:28,765 | INFO     | --------------------------------------------------
[2025-07-27 01:01:01] 2025-07-27 05:00:28,765 | INFO     | 
[2025-07-27 01:01:01] 2025-07-27 05:00:28,765 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 01:01:01] 2025-07-27 05:00:28,785 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 01:01:01] 2025-07-27 05:00:28,785 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 01:01:01] 2025-07-27 05:00:28,785 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 01:01:01] 2025-07-27 05:00:28,785 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 01:01:01] 2025-07-27 05:00:28,785 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 01:01:01] 2025-07-27 05:00:28,786 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 01:01:01] 2025-07-27 05:00:28,786 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 01:01:01] 2025-07-27 05:00:28,786 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 01:01:01] 2025-07-27 05:00:28,786 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 01:01:01] 2025-07-27 05:00:28,786 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 01:01:01] 2025-07-27 05:00:28,786 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 01:01:01] 2025-07-27 05:00:28,786 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 01:01:01] 2025-07-27 05:00:28,786 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 01:01:01] 2025-07-27 05:00:28,786 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 01:01:01] 2025-07-27 05:00:28,786 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 01:01:01] 2025-07-27 05:00:28,786 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 01:01:01] 2025-07-27 05:00:28,786 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 01:01:01] 2025-07-27 05:00:28,787 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 01:01:01] 2025-07-27 05:00:28,787 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 01:01:01] 2025-07-27 05:00:28,787 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 01:01:01] 2025-07-27 05:00:28,787 | INFO     | job 6745736065 has completed (purged errors)
[2025-07-27 01:01:01] 2025-07-27 05:00:28,787 | INFO     | overall cleanup function is called
[2025-07-27 01:01:01] 2025-07-27 05:00:29,795 | INFO     | --- collectZombieJob: --- 10, [475014]
[2025-07-27 01:01:01] 2025-07-27 05:00:29,795 | INFO     | zombie collector waiting for pid 475014
[2025-07-27 01:01:01] 2025-07-27 05:00:29,795 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 01:01:01] 2025-07-27 05:00:29,796 | INFO     | collected zombie processes
[2025-07-27 01:01:01] 2025-07-27 05:00:29,796 | INFO     | will attempt to kill all subprocesses of pid=475014
[2025-07-27 01:01:01] 2025-07-27 05:00:29,997 | INFO     | process IDs to be killed: [475014] (in reverse order)
[2025-07-27 01:01:01] 2025-07-27 05:00:30,080 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 01:01:01] 2025-07-27 05:00:30,081 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 01:01:01] 2025-07-27 05:00:30,092 | INFO     | did not find any defunct processes belonging to 475014
[2025-07-27 01:01:01] 2025-07-27 05:00:30,102 | INFO     | did not find any defunct processes belonging to 475014
[2025-07-27 01:01:01] 2025-07-27 05:00:30,103 | INFO     | ready for new job
[2025-07-27 01:01:01] 2025-07-27 05:00:30,103 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 01:01:01] 2025-07-27 05:00:30,105 | INFO     | ***************************************
[2025-07-27 01:01:01] 2025-07-27 05:00:30,105 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 01:01:01] 2025-07-27 05:00:30,105 | INFO     | ***************************************
[2025-07-27 01:01:01] 2025-07-27 05:00:30,105 | INFO     | 
[2025-07-27 01:01:01] 2025-07-27 05:00:30,108 | INFO     | architecture information:
[2025-07-27 01:01:01] 2025-07-27 05:00:30,109 | INFO     | executing command: cat /etc/os-release
[2025-07-27 01:01:01] 2025-07-27 05:00:30,123 | INFO     | cat /etc/os-release:
[2025-07-27 01:01:01] NAME="CentOS Linux"
[2025-07-27 01:01:01] VERSION="7 (Core)"
[2025-07-27 01:01:01] ID="centos"
[2025-07-27 01:01:01] ID_LIKE="rhel fedora"
[2025-07-27 01:01:01] VERSION_ID="7"
[2025-07-27 01:01:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 01:01:01] ANSI_COLOR="0;31"
[2025-07-27 01:01:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 01:01:01] HOME_URL="https://www.centos.org/"
[2025-07-27 01:01:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 01:01:01] 
[2025-07-27 01:01:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 01:01:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 01:01:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 01:01:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 01:01:01] 
[2025-07-27 01:01:01] 2025-07-27 05:00:30,124 | INFO     | ***************************************
[2025-07-27 01:01:01] 2025-07-27 05:00:30,626 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 01:01:01] 2025-07-27 05:00:30,642 | INFO     | sufficient remaining disk space (76361498624 B)
[2025-07-27 01:01:01] 2025-07-27 05:00:30,643 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 01:01:01] 2025-07-27 05:00:30,643 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 01:01:01] 2025-07-27 05:00:30,643 | INFO     | update_server=False
[2025-07-27 01:01:01] 2025-07-27 05:00:30,643 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 01:01:01] 2025-07-27 05:00:30,644 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 01:01:01] 2025-07-27 05:00:30,644 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 01:01:01] 2025-07-27 05:00:30,644 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 01:01:01] 2025-07-27 05:00:30,644 | INFO     | aborting loop
[2025-07-27 01:01:01] 2025-07-27 05:00:31,355 | INFO     | all payload control threads have been joined
[2025-07-27 01:01:01] 2025-07-27 05:00:31,460 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 01:01:01] 2025-07-27 05:00:31,556 | INFO     | all data control threads have been joined
[2025-07-27 01:01:01] 2025-07-27 05:00:31,648 | INFO     | [job] retrieve thread has finished
[2025-07-27 01:01:01] 2025-07-27 05:00:31,649 | INFO     | [job] job monitor thread has finished
[2025-07-27 01:01:01] 2025-07-27 05:00:31,649 | INFO     | [job] queue monitor thread has finished
[2025-07-27 01:01:01] 2025-07-27 05:00:31,973 | INFO     | [data] copytool_in thread has finished
[2025-07-27 01:01:01] 2025-07-27 05:00:32,042 | INFO     | all job control threads have been joined
[2025-07-27 01:01:01] 2025-07-27 05:00:32,149 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 01:01:01] 2025-07-27 05:00:32,303 | INFO     | [job] validate thread has finished
[2025-07-27 01:01:01] 2025-07-27 05:00:32,360 | INFO     | [payload] control thread has finished
[2025-07-27 01:01:01] 2025-07-27 05:00:32,437 | INFO     | [payload] failed_post thread has finished
[2025-07-27 01:01:01] 2025-07-27 05:00:32,561 | INFO     | [data] control thread has finished
[2025-07-27 01:01:01] 2025-07-27 05:00:32,631 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 01:01:01] 2025-07-27 05:00:32,816 | INFO     | [payload] validate_post thread has finished
[2025-07-27 01:01:01] 2025-07-27 05:00:32,931 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 01:01:01] 2025-07-27 05:00:33,047 | INFO     | [job] control thread has finished
[2025-07-27 01:01:01] 2025-07-27 05:00:33,465 | INFO     | [data] copytool_out thread has finished
[2025-07-27 01:01:01] 2025-07-27 05:00:34,649 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 01:01:01] 2025-07-27 05:00:41,042 | INFO     | job.realtimelogging is not enabled
[2025-07-27 01:01:01] 2025-07-27 05:00:42,047 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 01:01:01] 2025-07-27 05:00:42,823 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140600887207744)>', '<ExcThread(monitor, started 140600183617280)>']
[2025-07-27 01:01:01] 2025-07-27 05:00:47,849 | INFO     | all workflow threads have been joined
[2025-07-27 01:01:01] 2025-07-27 05:00:47,849 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 01:01:01] 2025-07-27 05:00:47,849 | INFO     | traces error code: 0
[2025-07-27 01:01:01] 2025-07-27 05:00:47,850 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 01:01:01] 2025-07-27 05:01:01,044 | INFO     | PID=468123 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 01:01:01] 2025-07-27 05:01:01,045 | INFO     | .. there are 14 such processes running
[2025-07-27 01:01:01] 2025-07-27 05:01:01,045 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 01:01:01] 2025-07-27 05:01:01,046 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 01:01:01] 2025-07-27 05:01:01,046 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 01:01:01] 2025-07-27 05:01:01,046 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 01:01:01] 2025-07-27 05:01:01,046 | INFO     | [monitor] control thread has ended
[2025-07-27 01:01:01] 2025-07-27 05:01:01,163 [wrapper] ==== pilot stdout END ====
[2025-07-27 01:01:01] 2025-07-27 05:01:01,165 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 01:01:01] 2025-07-27 05:01:01,168 [wrapper] pilotpid: 468123
[2025-07-27 01:01:01] 2025-07-27 05:01:01,171 [wrapper] Pilot exit status: 0
[2025-07-27 01:01:01] 2025-07-27 05:01:01,182 [wrapper] pandaids: 6745736065
[2025-07-27 01:01:01] 2025-07-27 05:01:01,240 [wrapper] cleanup supervisor_pilot  566202 468124
[2025-07-27 01:01:01] 2025-07-27 05:01:01,243 [wrapper] Test setup, not cleaning
[2025-07-27 01:01:01] 2025-07-27 05:01:01,246 [wrapper] apfmon messages muted
[2025-07-27 01:01:01] 2025-07-27 05:01:01,249 [wrapper] ==== wrapper stdout END ====
[2025-07-27 01:01:01] 2025-07-27 05:01:01,252 [wrapper] ==== wrapper stderr END ====
[2025-07-27 01:01:01]  *** Error codes and diagnostics ***
[2025-07-27 01:01:01]     "exeErrorCode": 0,
[2025-07-27 01:01:01]     "exeErrorDiag": "",
[2025-07-27 01:01:01]     "pilotErrorCode": 0,
[2025-07-27 01:01:01]     "pilotErrorDiag": "",
[2025-07-27 01:01:01]  *** Listing of results directory ***
[2025-07-27 01:01:01] total 394460
[2025-07-27 01:01:01] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 17:23 pilot3.tar.gz
[2025-07-27 01:01:01] -rwx------. 1 boincer umatlas     36292 Jul 26 17:24 runpilot2-wrapper.sh
[2025-07-27 01:01:01] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 17:24 queuedata.json
[2025-07-27 01:01:01] -rw-r--r--. 1 boincer umatlas       100 Jul 26 23:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 01:01:01] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 23:48 run_atlas
[2025-07-27 01:01:01] -rw-r--r--. 1 boincer umatlas       105 Jul 26 23:48 job.xml
[2025-07-27 01:01:01] -rw-r--r--. 2 boincer umatlas 189776288 Jul 26 23:48 EVNT.45743347._002556.pool.root.1
[2025-07-27 01:01:01] -rw-r--r--. 2 boincer umatlas    542895 Jul 26 23:48 input.tar.gz
[2025-07-27 01:01:01] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 23:48 start_atlas.sh
[2025-07-27 01:01:01] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 23:48 shared
[2025-07-27 01:01:01] -rw-r--r--. 1 boincer umatlas         0 Jul 26 23:48 boinc_lockfile
[2025-07-27 01:01:01] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 23:48 pandaJob.out
[2025-07-27 01:01:01] -rw-------. 1 boincer umatlas    980125 Jul 26 23:48 agis_schedconf.cvmfs.json
[2025-07-27 01:01:01] -rw-------. 1 boincer umatlas   1593052 Jul 26 23:48 agis_ddmendpoints.agis.ALL.json
[2025-07-27 01:01:01] drwx------. 4 boincer umatlas      4096 Jul 26 23:48 pilot3
[2025-07-27 01:01:01] -rw-r--r--. 1 boincer umatlas      6843 Jul 27 00:55 init_data.xml
[2025-07-27 01:01:01] -rw-r--r--. 1 boincer umatlas       529 Jul 27 00:59 boinc_task_state.xml
[2025-07-27 01:01:01] -rw-------. 1 boincer umatlas 208676951 Jul 27 00:59 HITS.45743349._044660.pool.root.1
[2025-07-27 01:01:01] -rw-------. 1 boincer umatlas      1047 Jul 27 01:00 memory_monitor_summary.json
[2025-07-27 01:01:01] -rw-------. 1 boincer umatlas    363441 Jul 27 01:00 log.45743349._044660.job.log.tgz.1
[2025-07-27 01:01:01] -rw-------. 1 boincer umatlas      7820 Jul 27 01:00 heartbeat.json
[2025-07-27 01:01:01] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 01:00 boinc_mmap_file
[2025-07-27 01:01:01] -rw-r--r--. 1 boincer umatlas        27 Jul 27 01:01 wrapper_checkpoint.txt
[2025-07-27 01:01:01] -rw-------. 1 boincer umatlas        95 Jul 27 01:01 pilot_heartbeat.json
[2025-07-27 01:01:01] -rw-------. 1 boincer umatlas       822 Jul 27 01:01 pilotlog.txt
[2025-07-27 01:01:01] -rw-------. 1 boincer umatlas    435707 Jul 27 01:01 log.45743349._044660.job.log.1
[2025-07-27 01:01:01] -rw-------. 1 boincer umatlas       357 Jul 27 01:01 output.list
[2025-07-27 01:01:01] -rw-r--r--. 1 boincer umatlas       620 Jul 27 01:01 runtime_log
[2025-07-27 01:01:01] -rw-------. 1 boincer umatlas    819200 Jul 27 01:01 result.tar.gz
[2025-07-27 01:01:01] -rw-r--r--. 1 boincer umatlas      8667 Jul 27 01:01 runtime_log.err
[2025-07-27 01:01:01] -rw-------. 1 boincer umatlas       654 Jul 27 01:01 7KQMDmBZ1z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmYT1KDm7iBKsm.diag
[2025-07-27 01:01:01] -rw-r--r--. 1 boincer umatlas     21462 Jul 27 01:01 stderr.txt
[2025-07-27 01:01:01] HITS file was successfully produced:
[2025-07-27 01:01:01] -rw-------. 1 boincer umatlas 208676951 Jul 27 00:59 shared/HITS.pool.root.1
[2025-07-27 01:01:01]  *** Contents of shared directory: ***
[2025-07-27 01:01:01] total 390472
[2025-07-27 01:01:01] -rw-r--r--. 2 boincer umatlas 189776288 Jul 26 23:48 ATLAS.root_0
[2025-07-27 01:01:01] -rw-r--r--. 2 boincer umatlas    542895 Jul 26 23:48 input.tar.gz
[2025-07-27 01:01:01] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 23:48 start_atlas.sh
[2025-07-27 01:01:01] -rw-------. 1 boincer umatlas 208676951 Jul 27 00:59 HITS.pool.root.1
[2025-07-27 01:01:01] -rw-------. 1 boincer umatlas    819200 Jul 27 01:01 result.tar.gz
01:01:02 (464530): run_atlas exited; CPU time 45757.188745
01:01:02 (464530): called boinc_finish(0)

</stderr_txt>
]]>

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