Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:06:12 (479): wrapper (7.7.26015): starting
16:06:12 (479): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 16:06:12] Arguments: --nthreads 8
[2025-07-27 16:06:12] Threads: 8
[2025-07-27 16:06:12] Checking for CVMFS
[2025-07-27 16:06:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 16:06:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 16:06:15] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 16:06:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 16:06:16] 2.11.2.0 17097 109614 138168 148813 0 11 19346110 25165825 4632 130560 0 77484371 99.873 50731430 3640 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-27 16:06:16] CVMFS is ok
[2025-07-27 16:06:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 16:06:16] Checking for apptainer binary...
[2025-07-27 16:06:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 16:06:16] Running /usr/bin/apptainer --version
[2025-07-27 16:06:16] apptainer version 1.3.2-1.el7
[2025-07-27 16:06:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 16:27:36] cg-vwn442.simple-grid.lan
[2025-07-27 16:27:36] apptainer works
[2025-07-27 16:27:36] Set ATHENA_PROC_NUMBER=8
[2025-07-27 16:27:36] Set ATHENA_CORE_NUMBER=8
[2025-07-27 16:27:36] Starting ATLAS job with PandaID=6745775498
[2025-07-27 16:27:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 21:01:22]  *** The last 200 lines of the pilot log: ***
[2025-07-27 21:01:22] 2025-07-27 19:00:47,231 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 21:01:22] 2025-07-27 19:00:48,983 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 21:01:22] 2025-07-27 19:00:48,984 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-07-27 21:01:22] 2025-07-27 19:00:48,986 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6745775498/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 21:01:22] 2025-07-27 19:00:48,987 | INFO     | extracted standard info from prmon json
[2025-07-27 21:01:22] 2025-07-27 19:00:48,987 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 21:01:22] 2025-07-27 19:00:48,987 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 21:01:22] 2025-07-27 19:00:48,988 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 21:01:22] 2025-07-27 19:00:48,988 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 21:01:22] 2025-07-27 19:00:48,994 | INFO     | fitting pss+swap vs Time
[2025-07-27 21:01:22] 2025-07-27 19:00:48,995 | INFO     | sum of square deviations: 5902093918.0
[2025-07-27 21:01:22] 2025-07-27 19:00:48,998 | INFO     | sum of deviations: -12409091651.999998
[2025-07-27 21:01:22] 2025-07-27 19:00:48,998 | INFO     | mean x: 1753634654.0
[2025-07-27 21:01:22] 2025-07-27 19:00:48,998 | INFO     | mean y: 2517380.9288389515
[2025-07-27 21:01:22] 2025-07-27 19:00:48,998 | INFO     | -- intersect: 3689516172.8733935
[2025-07-27 21:01:22] 2025-07-27 19:00:48,998 | INFO     | intersect: 3689516172.8733935
[2025-07-27 21:01:22] 2025-07-27 19:00:48,999 | INFO     | chi2: 2.033950414968568
[2025-07-27 21:01:22] 2025-07-27 19:00:49,000 | INFO     | sum of square deviations: 5576683165.5
[2025-07-27 21:01:22] 2025-07-27 19:00:49,002 | INFO     | sum of deviations: -12033710980.499996
[2025-07-27 21:01:22] 2025-07-27 19:00:49,002 | INFO     | mean x: 1753634501.5
[2025-07-27 21:01:22] 2025-07-27 19:00:49,002 | INFO     | mean y: 2517556.8664122135
[2025-07-27 21:01:22] 2025-07-27 19:00:49,003 | INFO     | -- intersect: 3786618272.330339
[2025-07-27 21:01:22] 2025-07-27 19:00:49,003 | INFO     | intersect: 3786618272.330339
[2025-07-27 21:01:22] 2025-07-27 19:00:49,003 | INFO     | chi2: 2.033454208299902
[2025-07-27 21:01:22] 2025-07-27 19:00:49,003 | INFO     | current chi2=2.033454208299902 (change=0.024396202828447847 %)
[2025-07-27 21:01:22] 2025-07-27 19:00:49,003 | INFO     | right removable region: 261
[2025-07-27 21:01:22] 2025-07-27 19:00:49,004 | INFO     | sum of square deviations: 5576683165.5
[2025-07-27 21:01:22] 2025-07-27 19:00:49,006 | INFO     | sum of deviations: -62772089558.500084
[2025-07-27 21:01:22] 2025-07-27 19:00:49,007 | INFO     | mean x: 1753634806.5
[2025-07-27 21:01:22] 2025-07-27 19:00:49,007 | INFO     | mean y: 2540829.354961832
[2025-07-27 21:01:22] 2025-07-27 19:00:49,007 | INFO     | -- intersect: 19741751012.1252
[2025-07-27 21:01:22] 2025-07-27 19:00:49,007 | INFO     | intersect: 19741751012.1252
[2025-07-27 21:01:22] 2025-07-27 19:00:49,008 | INFO     | chi2: 0.234200785970633
[2025-07-27 21:01:22] 2025-07-27 19:00:49,008 | INFO     | current chi2=0.234200785970633 (change=88.48542303455062 %)
[2025-07-27 21:01:22] 2025-07-27 19:00:49,008 | INFO     | sum of square deviations: 5263458688.0
[2025-07-27 21:01:22] 2025-07-27 19:00:49,011 | INFO     | sum of deviations: -59595492812.000046
[2025-07-27 21:01:22] 2025-07-27 19:00:49,011 | INFO     | mean x: 1753634959.0
[2025-07-27 21:01:22] 2025-07-27 19:00:49,011 | INFO     | mean y: 2539261.6887159534
[2025-07-27 21:01:22] 2025-07-27 19:00:49,011 | INFO     | -- intersect: 19858065026.946987
[2025-07-27 21:01:22] 2025-07-27 19:00:49,011 | INFO     | intersect: 19858065026.946987
[2025-07-27 21:01:22] 2025-07-27 19:00:49,012 | INFO     | chi2: 0.2247241655010979
[2025-07-27 21:01:22] 2025-07-27 19:00:49,012 | INFO     | current chi2=0.2247241655010979 (change=4.04636578406847 %)
[2025-07-27 21:01:22] 2025-07-27 19:00:49,012 | INFO     | left removable region: 20
[2025-07-27 21:01:22] 2025-07-27 19:00:49,013 | INFO     | sum of square deviations: 4340323240.0
[2025-07-27 21:01:22] 2025-07-27 19:00:49,015 | INFO     | sum of deviations: -42773301260.00001
[2025-07-27 21:01:22] 2025-07-27 19:00:49,015 | INFO     | mean x: 1753635081.0
[2025-07-27 21:01:22] 2025-07-27 19:00:49,015 | INFO     | mean y: 2531670.5020746887
[2025-07-27 21:01:22] 2025-07-27 19:00:49,015 | INFO     | -- intersect: 17284369329.14556
[2025-07-27 21:01:22] 2025-07-27 19:00:49,016 | INFO     | intersect: 17284369329.14556
[2025-07-27 21:01:22] 2025-07-27 19:00:49,016 | INFO     | chi2: 0.20035527122085162
[2025-07-27 21:01:22] 2025-07-27 19:00:49,016 | INFO     | -- intersect: 17284369329.14556
[2025-07-27 21:01:22] 2025-07-27 19:00:49,016 | INFO     | current memory leak: -9.85 B/s (using 241 data points, chi2=0.20)
[2025-07-27 21:01:22] 2025-07-27 19:00:49,017 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-07-27 21:01:22] 2025-07-27 19:00:49,018 | INFO     | ..............................
[2025-07-27 21:01:22] 2025-07-27 19:00:49,018 | INFO     | . Timing measurements:
[2025-07-27 21:01:22] 2025-07-27 19:00:49,018 | INFO     | . get job = 0 s
[2025-07-27 21:01:22] 2025-07-27 19:00:49,018 | INFO     | . initial setup = 2 s
[2025-07-27 21:01:22] 2025-07-27 19:00:49,018 | INFO     | . payload setup = 16 s
[2025-07-27 21:01:22] 2025-07-27 19:00:49,018 | INFO     | . stage-in = 0 s
[2025-07-27 21:01:22] 2025-07-27 19:00:49,018 | INFO     | . payload execution = 16307 s
[2025-07-27 21:01:22] 2025-07-27 19:00:49,018 | INFO     | . stage-out = 1 s
[2025-07-27 21:01:22] 2025-07-27 19:00:49,018 | INFO     | . log creation = 0 s
[2025-07-27 21:01:22] 2025-07-27 19:00:49,019 | INFO     | ..............................
[2025-07-27 21:01:22] 2025-07-27 19:00:49,160 | INFO     | 
[2025-07-27 21:01:22] 2025-07-27 19:00:49,161 | INFO     | job summary report
[2025-07-27 21:01:22] 2025-07-27 19:00:49,161 | INFO     | --------------------------------------------------
[2025-07-27 21:01:22] 2025-07-27 19:00:49,161 | INFO     | PanDA job id: 6745775498
[2025-07-27 21:01:22] 2025-07-27 19:00:49,161 | INFO     | task id: 45743349
[2025-07-27 21:01:22] 2025-07-27 19:00:49,161 | INFO     | errors: (none)
[2025-07-27 21:01:22] 2025-07-27 19:00:49,161 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 21:01:22] 2025-07-27 19:00:49,161 | INFO     | pilot state: finished 
[2025-07-27 21:01:22] 2025-07-27 19:00:49,161 | INFO     | transexitcode: 0
[2025-07-27 21:01:22] 2025-07-27 19:00:49,161 | INFO     | exeerrorcode: 0
[2025-07-27 21:01:22] 2025-07-27 19:00:49,162 | INFO     | exeerrordiag: 
[2025-07-27 21:01:22] 2025-07-27 19:00:49,162 | INFO     | exitcode: 0
[2025-07-27 21:01:22] 2025-07-27 19:00:49,162 | INFO     | exitmsg: OK
[2025-07-27 21:01:22] 2025-07-27 19:00:49,162 | INFO     | cpuconsumptiontime: 63227 s
[2025-07-27 21:01:22] 2025-07-27 19:00:49,162 | INFO     | nevents: 400
[2025-07-27 21:01:22] 2025-07-27 19:00:49,162 | INFO     | neventsw: 0
[2025-07-27 21:01:22] 2025-07-27 19:00:49,162 | INFO     | pid: 11467
[2025-07-27 21:01:22] 2025-07-27 19:00:49,162 | INFO     | pgrp: 11467
[2025-07-27 21:01:22] 2025-07-27 19:00:49,162 | INFO     | corecount: 8
[2025-07-27 21:01:22] 2025-07-27 19:00:49,162 | INFO     | event service: False
[2025-07-27 21:01:22] 2025-07-27 19:00:49,163 | INFO     | sizes: {0: 2397298, 1: 2397497, 12: 2397787, 16327: 2428862, 16328: 2428861, 16330: 2437915, 16333: 2438099, 16348: 2438293}
[2025-07-27 21:01:22] 2025-07-27 19:00:49,163 | INFO     | --------------------------------------------------
[2025-07-27 21:01:22] 2025-07-27 19:00:49,163 | INFO     | 
[2025-07-27 21:01:22] 2025-07-27 19:00:49,163 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-07-27 21:01:22] 2025-07-27 19:00:49,402 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 21:01:22] 2025-07-27 19:00:49,403 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 21:01:22] 2025-07-27 19:00:49,403 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 21:01:22] 2025-07-27 19:00:49,403 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 21:01:22] 2025-07-27 19:00:49,403 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 21:01:22] 2025-07-27 19:00:49,403 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 21:01:22] 2025-07-27 19:00:49,403 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 21:01:22] 2025-07-27 19:00:49,404 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 21:01:22] 2025-07-27 19:00:49,404 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 21:01:22] 2025-07-27 19:00:49,404 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 21:01:22] 2025-07-27 19:00:49,404 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 21:01:22] 2025-07-27 19:00:49,404 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 21:01:22] 2025-07-27 19:00:49,404 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 21:01:22] 2025-07-27 19:00:49,404 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 21:01:22] 2025-07-27 19:00:49,404 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 21:01:22] 2025-07-27 19:00:49,404 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 21:01:22] 2025-07-27 19:00:49,404 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 21:01:22] 2025-07-27 19:00:49,404 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 21:01:22] 2025-07-27 19:00:49,405 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 21:01:22] 2025-07-27 19:00:49,405 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 21:01:22] 2025-07-27 19:00:49,405 | INFO     | job 6745775498 has completed (purged errors)
[2025-07-27 21:01:22] 2025-07-27 19:00:49,405 | INFO     | overall cleanup function is called
[2025-07-27 21:01:22] 2025-07-27 19:00:50,096 | INFO     | PID=4926 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-27 21:01:22] 2025-07-27 19:00:50,096 | INFO     | .. there are 9 such processes running
[2025-07-27 21:01:22] 2025-07-27 19:00:50,414 | INFO     | --- collectZombieJob: --- 10, [11467]
[2025-07-27 21:01:22] 2025-07-27 19:00:50,414 | INFO     | zombie collector waiting for pid 11467
[2025-07-27 21:01:22] 2025-07-27 19:00:50,415 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 21:01:22] 2025-07-27 19:00:50,415 | INFO     | collected zombie processes
[2025-07-27 21:01:22] 2025-07-27 19:00:50,415 | INFO     | will attempt to kill all subprocesses of pid=11467
[2025-07-27 21:01:22] 2025-07-27 19:00:50,512 | INFO     | process IDs to be killed: [11467] (in reverse order)
[2025-07-27 21:01:22] 2025-07-27 19:00:50,629 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 21:01:22] 2025-07-27 19:00:50,629 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 21:01:22] 2025-07-27 19:00:50,632 | INFO     | did not find any defunct processes belonging to 11467
[2025-07-27 21:01:22] 2025-07-27 19:00:50,635 | INFO     | did not find any defunct processes belonging to 11467
[2025-07-27 21:01:22] 2025-07-27 19:00:50,636 | INFO     | ready for new job
[2025-07-27 21:01:22] 2025-07-27 19:00:50,636 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 21:01:22] 2025-07-27 19:00:50,638 | INFO     | ***************************************
[2025-07-27 21:01:22] 2025-07-27 19:00:50,638 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 21:01:22] 2025-07-27 19:00:50,638 | INFO     | ***************************************
[2025-07-27 21:01:22] 2025-07-27 19:00:50,638 | INFO     | 
[2025-07-27 21:01:22] 2025-07-27 19:00:50,639 | INFO     | pilot is running in a VM
[2025-07-27 21:01:22] 2025-07-27 19:00:50,639 | INFO     | architecture information:
[2025-07-27 21:01:22] 2025-07-27 19:00:50,640 | INFO     | executing command: cat /etc/os-release
[2025-07-27 21:01:22] 2025-07-27 19:00:50,673 | INFO     | cat /etc/os-release:
[2025-07-27 21:01:22] NAME="CentOS Linux"
[2025-07-27 21:01:22] VERSION="7 (Core)"
[2025-07-27 21:01:22] ID="centos"
[2025-07-27 21:01:22] ID_LIKE="rhel fedora"
[2025-07-27 21:01:22] VERSION_ID="7"
[2025-07-27 21:01:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 21:01:22] ANSI_COLOR="0;31"
[2025-07-27 21:01:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 21:01:22] HOME_URL="https://www.centos.org/"
[2025-07-27 21:01:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 21:01:22] 
[2025-07-27 21:01:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 21:01:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 21:01:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 21:01:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 21:01:22] 
[2025-07-27 21:01:22] 2025-07-27 19:00:50,673 | INFO     | ***************************************
[2025-07-27 21:01:22] 2025-07-27 19:00:51,175 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-07-27 21:01:22] 2025-07-27 19:00:51,195 | INFO     | sufficient remaining disk space (496826843136 B)
[2025-07-27 21:01:22] 2025-07-27 19:00:51,196 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 21:01:22] 2025-07-27 19:00:51,196 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 21:01:22] 2025-07-27 19:00:51,196 | INFO     | update_server=False
[2025-07-27 21:01:22] 2025-07-27 19:00:51,196 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 21:01:22] 2025-07-27 19:00:51,197 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 21:01:22] 2025-07-27 19:00:51,197 | INFO     | aborting loop
[2025-07-27 21:01:22] 2025-07-27 19:00:51,344 | INFO     | all data control threads have been joined
[2025-07-27 21:01:22] 2025-07-27 19:00:52,047 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 21:01:22] 2025-07-27 19:00:52,202 | INFO     | [job] retrieve thread has finished
[2025-07-27 21:01:22] 2025-07-27 19:00:52,203 | INFO     | [job] job monitor thread has finished
[2025-07-27 21:01:22] 2025-07-27 19:00:52,203 | INFO     | all job control threads have been joined
[2025-07-27 21:01:22] 2025-07-27 19:00:52,257 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 21:01:22] 2025-07-27 19:00:52,316 | INFO     | all payload control threads have been joined
[2025-07-27 21:01:22] 2025-07-27 19:00:52,350 | INFO     | [data] control thread has finished
[2025-07-27 21:01:22] 2025-07-27 19:00:52,445 | INFO     | [data] copytool_in thread has finished
[2025-07-27 21:01:22] 2025-07-27 19:00:52,849 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 21:01:22] 2025-07-27 19:00:53,147 | INFO     | [job] validate thread has finished
[2025-07-27 21:01:22] 2025-07-27 19:00:53,209 | INFO     | [job] control thread has finished
[2025-07-27 21:01:22] 2025-07-27 19:00:53,322 | INFO     | [payload] control thread has finished
[2025-07-27 21:01:22] 2025-07-27 19:00:53,461 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 21:01:22] 2025-07-27 19:00:53,589 | INFO     | [payload] failed_post thread has finished
[2025-07-27 21:01:22] 2025-07-27 19:00:53,661 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 21:01:22] 2025-07-27 19:00:53,756 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 21:01:22] 2025-07-27 19:00:53,782 | INFO     | [payload] validate_post thread has finished
[2025-07-27 21:01:22] 2025-07-27 19:00:54,054 | INFO     | [data] copytool_out thread has finished
[2025-07-27 21:01:22] 2025-07-27 19:00:54,174 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 21:01:22] 2025-07-27 19:00:55,180 | INFO     | [job] queue monitor thread has finished
[2025-07-27 21:01:22] 2025-07-27 19:00:57,764 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 21:01:22] 2025-07-27 19:00:58,250 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140697058240320)>', '<ExcThread(monitor, started 140696468051712)>']
[2025-07-27 21:01:22] 2025-07-27 19:01:03,275 | INFO     | all workflow threads have been joined
[2025-07-27 21:01:22] 2025-07-27 19:01:03,275 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 21:01:22] 2025-07-27 19:01:03,276 | INFO     | traces error code: 0
[2025-07-27 21:01:22] 2025-07-27 19:01:03,276 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 21:01:22] 2025-07-27 19:01:22,253 | INFO     | PID=4926 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-27 21:01:22] 2025-07-27 19:01:22,254 | INFO     | .. there are 8 such processes running
[2025-07-27 21:01:22] 2025-07-27 19:01:22,254 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 21:01:22] 2025-07-27 19:01:22,254 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 21:01:22] 2025-07-27 19:01:22,254 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 21:01:22] 2025-07-27 19:01:22,254 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 21:01:22] 2025-07-27 19:01:22,254 | INFO     | [monitor] control thread has ended
[2025-07-27 21:01:22] 2025-07-27 19:01:22,510 [wrapper] ==== pilot stdout END ====
[2025-07-27 21:01:22] 2025-07-27 19:01:22,545 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 21:01:22] 2025-07-27 19:01:22,577 [wrapper] pilotpid: 4926
[2025-07-27 21:01:22] 2025-07-27 19:01:22,588 [wrapper] Pilot exit status: 0
[2025-07-27 21:01:22] 2025-07-27 19:01:22,620 [wrapper] pandaids: 6745775498
[2025-07-27 21:01:22] 2025-07-27 19:01:22,660 [wrapper] cleanup supervisor_pilot  6605 4927
[2025-07-27 21:01:22] 2025-07-27 19:01:22,664 [wrapper] Test setup, not cleaning
[2025-07-27 21:01:22] 2025-07-27 19:01:22,669 [wrapper] apfmon messages muted
[2025-07-27 21:01:22] 2025-07-27 19:01:22,672 [wrapper] ==== wrapper stdout END ====
[2025-07-27 21:01:22] 2025-07-27 19:01:22,677 [wrapper] ==== wrapper stderr END ====
[2025-07-27 21:01:22]  *** Error codes and diagnostics ***
[2025-07-27 21:01:22]     "exeErrorCode": 0,
[2025-07-27 21:01:22]     "exeErrorDiag": "",
[2025-07-27 21:01:22]     "pilotErrorCode": 0,
[2025-07-27 21:01:22]     "pilotErrorDiag": "",
[2025-07-27 21:01:22]  *** Listing of results directory ***
[2025-07-27 21:01:22] total 352816
[2025-07-27 21:01:22] -rw-r--r--. 1 boinc boinc    530466 Jul 26 23:23 pilot3.tar.gz
[2025-07-27 21:01:22] -rw-r--r--. 1 boinc boinc      5112 Jul 26 23:27 queuedata.json
[2025-07-27 21:01:22] -rwx------. 1 boinc boinc     36292 Jul 26 23:28 runpilot2-wrapper.sh
[2025-07-27 21:01:22] -rw-r--r--. 1 boinc boinc       100 Jul 27 16:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 21:01:22] -rwxr-xr-x. 1 boinc boinc      7986 Jul 27 16:06 run_atlas
[2025-07-27 21:01:22] -rw-r--r--. 1 boinc boinc       105 Jul 27 16:06 job.xml
[2025-07-27 21:01:22] -rw-r--r--. 2 boinc boinc 147218661 Jul 27 16:06 EVNT.45743347._002567.pool.root.1
[2025-07-27 21:01:22] -rw-r--r--. 1 boinc boinc      6392 Jul 27 16:06 init_data.xml
[2025-07-27 21:01:22] -rw-r--r--. 2 boinc boinc     15095 Jul 27 16:06 start_atlas.sh
[2025-07-27 21:01:22] drwxrwx--x. 2 boinc boinc        68 Jul 27 16:06 shared
[2025-07-27 21:01:22] -rw-r--r--. 2 boinc boinc    542886 Jul 27 16:06 input.tar.gz
[2025-07-27 21:01:22] -rw-r--r--. 1 boinc boinc         0 Jul 27 16:06 boinc_lockfile
[2025-07-27 21:01:22] -rw-r--r--. 1 boinc boinc      2560 Jul 27 16:27 pandaJob.out
[2025-07-27 21:01:22] -rw-------. 1 boinc boinc    980109 Jul 27 16:27 agis_schedconf.cvmfs.json
[2025-07-27 21:01:22] drwx------. 4 boinc boinc      4096 Jul 27 16:28 pilot3
[2025-07-27 21:01:22] -rw-------. 1 boinc boinc 206615743 Jul 27 20:59 HITS.45743349._044865.pool.root.1
[2025-07-27 21:01:22] -rw-r--r--. 1 boinc boinc       531 Jul 27 21:00 boinc_task_state.xml
[2025-07-27 21:01:22] -rw-------. 1 boinc boinc      1027 Jul 27 21:00 memory_monitor_summary.json
[2025-07-27 21:01:22] -rw-------. 1 boinc boinc   1593052 Jul 27 21:00 agis_ddmendpoints.agis.ALL.json
[2025-07-27 21:01:22] -rw-------. 1 boinc boinc    391511 Jul 27 21:00 log.45743349._044865.job.log.tgz.1
[2025-07-27 21:01:22] -rw-------. 1 boinc boinc        95 Jul 27 21:00 pilot_heartbeat.json
[2025-07-27 21:01:22] -rw-------. 1 boinc boinc      7771 Jul 27 21:00 heartbeat.json
[2025-07-27 21:01:22] -rw-r--r--. 1 boinc boinc      8192 Jul 27 21:01 boinc_mmap_file
[2025-07-27 21:01:22] -rw-r--r--. 1 boinc boinc        28 Jul 27 21:01 wrapper_checkpoint.txt
[2025-07-27 21:01:22] -rw-------. 1 boinc boinc       819 Jul 27 21:01 pilotlog.txt
[2025-07-27 21:01:22] -rw-------. 1 boinc boinc   1398664 Jul 27 21:01 log.45743349._044865.job.log.1
[2025-07-27 21:01:22] -rw-------. 1 boinc boinc       357 Jul 27 21:01 output.list
[2025-07-27 21:01:22] -rw-r--r--. 1 boinc boinc       620 Jul 27 21:01 runtime_log
[2025-07-27 21:01:22] -rw-------. 1 boinc boinc   1812480 Jul 27 21:01 result.tar.gz
[2025-07-27 21:01:22] -rw-r--r--. 1 boinc boinc      8660 Jul 27 21:01 runtime_log.err
[2025-07-27 21:01:22] -rw-------. 1 boinc boinc       657 Jul 27 21:01 OatKDmGc1z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDCTLDm3fAZ0m.diag
[2025-07-27 21:01:22] -rw-r--r--. 1 boinc boinc     20878 Jul 27 21:01 stderr.txt
[2025-07-27 21:01:22] HITS file was successfully produced:
[2025-07-27 21:01:22] -rw-------. 1 boinc boinc 206615743 Jul 27 20:59 shared/HITS.pool.root.1
[2025-07-27 21:01:22]  *** Contents of shared directory: ***
[2025-07-27 21:01:22] total 347868
[2025-07-27 21:01:22] -rw-r--r--. 2 boinc boinc 147218661 Jul 27 16:06 ATLAS.root_0
[2025-07-27 21:01:22] -rw-r--r--. 2 boinc boinc     15095 Jul 27 16:06 start_atlas.sh
[2025-07-27 21:01:22] -rw-r--r--. 2 boinc boinc    542886 Jul 27 16:06 input.tar.gz
[2025-07-27 21:01:22] -rw-------. 1 boinc boinc 206615743 Jul 27 20:59 HITS.pool.root.1
[2025-07-27 21:01:22] -rw-------. 1 boinc boinc   1812480 Jul 27 21:01 result.tar.gz
21:01:24 (479): run_atlas exited; CPU time 63431.279020
21:01:24 (479): called boinc_finish(0)

</stderr_txt>
]]>

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