Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:23:43 (212445): wrapper (7.7.26015): starting
22:23:43 (212445): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 22:23:43] Arguments: --nthreads 8
[2025-07-26 22:23:43] Threads: 8
[2025-07-26 22:23:43] Checking for CVMFS
[2025-07-26 22:23:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 22:23:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 22:23:43] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 22:23:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 22:23:43] 2.13.1.0 2445429 3728 92148 148797 3 188 34731674 40960000 13740 16776704 0 59716189 99.999 133303 60345 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 22:23:43] CVMFS is ok
[2025-07-26 22:23:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 22:23:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 22:23:43] Further information can be found at the LHC@home message board.
[2025-07-26 22:23:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 22:23:43] Checking for apptainer binary...
[2025-07-26 22:23:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 22:23:43] Running /usr/bin/apptainer --version
[2025-07-26 22:23:43] apptainer version 1.4.1-1.el9
[2025-07-26 22:23:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 22:23:43] c-208-40.aglt2.org
[2025-07-26 22:23:43] apptainer works
[2025-07-26 22:23:44] Set ATHENA_PROC_NUMBER=8
[2025-07-26 22:23:44] Set ATHENA_CORE_NUMBER=8
[2025-07-26 22:23:44] Starting ATLAS job with PandaID=6745735982
[2025-07-26 22:23:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 23:20:40]  *** The last 200 lines of the pilot log: ***
[2025-07-26 23:20:40]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-26 23:20:40]  is_altstaged=None
[2025-07-26 23:20:40]  is_tar=False
[2025-07-26 23:20:40]  lfn=log.45743349._044577.job.log.tgz.1
[2025-07-26 23:20:40]  mtime=0
[2025-07-26 23:20:40]  protocol_id=None
[2025-07-26 23:20:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 23:20:40]  replicas=None
[2025-07-26 23:20:40]  scope=mc23_13p6TeV
[2025-07-26 23:20:40]  status=None
[2025-07-26 23:20:40]  status_code=0
[2025-07-26 23:20:40]  storage_token=
[2025-07-26 23:20:40]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6745735982/log.45743349._044577.job.log.tgz.1
[2025-07-26 23:20:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/e6/log.45743349._044577.job.log.tgz.1
[2025-07-26 23:20:40]  workdir=None
[2025-07-26 23:20:40] ]
[2025-07-26 23:20:40] 2025-07-27 03:20:04,482 | INFO     | transferring file log.45743349._044577.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6745735982/log.45743349._044577.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 23:20:40] 2025-07-27 03:20:04,483 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6745735982/log.45743349._044577.job.log.tgz.1 /tmp/boinchome/slots/1/log.45743349._044577.job
[2025-07-26 23:20:40] 2025-07-27 03:20:04,501 | INFO     | adding to output.list: log.45743349._044577.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/e6/log.45743349._044577.job.log.tg
[2025-07-26 23:20:40] 2025-07-27 03:20:04,502 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 23:20:40] 2025-07-27 03:20:04,502 | INFO     | summary of transferred files:
[2025-07-26 23:20:40] 2025-07-27 03:20:04,502 | INFO     |  -- lfn=log.45743349._044577.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 23:20:40] 2025-07-27 03:20:04,502 | INFO     | stage-out finished correctly
[2025-07-26 23:20:40] 2025-07-27 03:20:04,562 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 23:20:40] 2025-07-27 03:20:04,764 | INFO     | job 6745735982 has state=finished
[2025-07-26 23:20:40] 2025-07-27 03:20:04,764 | INFO     | preparing for final server update for job 6745735982 in state='finished'
[2025-07-26 23:20:40] 2025-07-27 03:20:04,765 | INFO     | this job has now completed (state=finished)
[2025-07-26 23:20:40] 2025-07-27 03:20:04,765 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 23:20:40] 2025-07-27 03:20:04,765 | INFO     | log transfer has been attempted: DONE
[2025-07-26 23:20:40] 2025-07-27 03:20:04,765 | INFO     | job 6745735982 has finished - writing final server update
[2025-07-26 23:20:40] 2025-07-27 03:20:04,765 | INFO     | total number of processed events: 400 (read)
[2025-07-26 23:20:40] 2025-07-27 03:20:04,766 | INFO     | executing command: lscpu
[2025-07-26 23:20:40] 2025-07-27 03:20:04,774 | INFO     | number of running child processes to parent process 224053: 1
[2025-07-26 23:20:40] 2025-07-27 03:20:04,775 | INFO     | maximum number of monitored processes: 6
[2025-07-26 23:20:40] 2025-07-27 03:20:04,823 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 23:20:40] 2025-07-27 03:20:07,278 | INFO     | monitor loop #248: job 0:6745735982 is in state 'finished'
[2025-07-26 23:20:40] 2025-07-27 03:20:07,278 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 23:20:40] 2025-07-27 03:20:08,729 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 23:20:40] 2025-07-27 03:20:08,733 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3795.6611796875
[2025-07-26 23:20:40] 2025-07-27 03:20:08,745 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6745735982/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 23:20:40] 2025-07-27 03:20:08,746 | INFO     | extracted standard info from prmon json
[2025-07-26 23:20:40] 2025-07-27 03:20:08,746 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 23:20:40] 2025-07-27 03:20:08,746 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 23:20:40] 2025-07-27 03:20:08,746 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 23:20:40] 2025-07-27 03:20:08,746 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 23:20:40] 2025-07-27 03:20:08,747 | INFO     | fitting pss+swap vs Time
[2025-07-26 23:20:40] 2025-07-27 03:20:08,747 | INFO     | sum of square deviations: 34277852.0
[2025-07-26 23:20:40] 2025-07-27 03:20:08,747 | INFO     | sum of deviations: -496366577.0
[2025-07-26 23:20:40] 2025-07-27 03:20:08,747 | INFO     | mean x: 1753584796.5
[2025-07-26 23:20:40] 2025-07-27 03:20:08,747 | INFO     | mean y: 2557571.75
[2025-07-26 23:20:40] 2025-07-27 03:20:08,747 | INFO     | -- intersect: 25395656384.299473
[2025-07-26 23:20:40] 2025-07-27 03:20:08,748 | INFO     | intersect: 25395656384.299473
[2025-07-26 23:20:40] 2025-07-27 03:20:08,748 | INFO     | chi2: 0.000685440691960378
[2025-07-26 23:20:40] 2025-07-27 03:20:08,748 | INFO     | -- intersect: 25395656384.299473
[2025-07-26 23:20:40] 2025-07-27 03:20:08,748 | INFO     | current memory leak: -14.48 B/s (using 48 data points, chi2=0.00)
[2025-07-26 23:20:40] 2025-07-27 03:20:08,748 | INFO     | could have reported an average CPU frequency of 3795 MHz (5 samples)
[2025-07-26 23:20:40] 2025-07-27 03:20:08,748 | INFO     | ..............................
[2025-07-26 23:20:40] 2025-07-27 03:20:08,748 | INFO     | . Timing measurements:
[2025-07-26 23:20:40] 2025-07-27 03:20:08,748 | INFO     | . get job = 0 s
[2025-07-26 23:20:40] 2025-07-27 03:20:08,748 | INFO     | . initial setup = 2 s
[2025-07-26 23:20:40] 2025-07-27 03:20:08,748 | INFO     | . payload setup = 5 s
[2025-07-26 23:20:40] 2025-07-27 03:20:08,748 | INFO     | . stage-in = 0 s
[2025-07-26 23:20:40] 2025-07-27 03:20:08,748 | INFO     | . payload execution = 3346 s
[2025-07-26 23:20:40] 2025-07-27 03:20:08,748 | INFO     | . stage-out = 0 s
[2025-07-26 23:20:40] 2025-07-27 03:20:08,748 | INFO     | . log creation = 0 s
[2025-07-26 23:20:40] 2025-07-27 03:20:08,748 | INFO     | ..............................
[2025-07-26 23:20:40] 2025-07-27 03:20:08,807 | INFO     | 
[2025-07-26 23:20:40] 2025-07-27 03:20:08,807 | INFO     | job summary report
[2025-07-26 23:20:40] 2025-07-27 03:20:08,807 | INFO     | --------------------------------------------------
[2025-07-26 23:20:40] 2025-07-27 03:20:08,807 | INFO     | PanDA job id: 6745735982
[2025-07-26 23:20:40] 2025-07-27 03:20:08,808 | INFO     | task id: 45743349
[2025-07-26 23:20:40] 2025-07-27 03:20:08,808 | INFO     | errors: (none)
[2025-07-26 23:20:40] 2025-07-27 03:20:08,808 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 23:20:40] 2025-07-27 03:20:08,808 | INFO     | pilot state: finished 
[2025-07-26 23:20:40] 2025-07-27 03:20:08,808 | INFO     | transexitcode: 0
[2025-07-26 23:20:40] 2025-07-27 03:20:08,808 | INFO     | exeerrorcode: 0
[2025-07-26 23:20:40] 2025-07-27 03:20:08,808 | INFO     | exeerrordiag: 
[2025-07-26 23:20:40] 2025-07-27 03:20:08,808 | INFO     | exitcode: 0
[2025-07-26 23:20:40] 2025-07-27 03:20:08,808 | INFO     | exitmsg: OK
[2025-07-26 23:20:40] 2025-07-27 03:20:08,808 | INFO     | cpuconsumptiontime: 24962 s
[2025-07-26 23:20:40] 2025-07-27 03:20:08,808 | INFO     | nevents: 400
[2025-07-26 23:20:40] 2025-07-27 03:20:08,808 | INFO     | neventsw: 0
[2025-07-26 23:20:40] 2025-07-27 03:20:08,808 | INFO     | pid: 224053
[2025-07-26 23:20:40] 2025-07-27 03:20:08,808 | INFO     | pgrp: 224053
[2025-07-26 23:20:40] 2025-07-27 03:20:08,808 | INFO     | corecount: 8
[2025-07-26 23:20:40] 2025-07-27 03:20:08,808 | INFO     | event service: False
[2025-07-26 23:20:40] 2025-07-27 03:20:08,808 | INFO     | sizes: {0: 2397475, 4: 2397737, 11: 2397765, 3355: 2423444, 3357: 2432498, 3361: 2432668}
[2025-07-26 23:20:40] 2025-07-27 03:20:08,808 | INFO     | --------------------------------------------------
[2025-07-26 23:20:40] 2025-07-27 03:20:08,808 | INFO     | 
[2025-07-26 23:20:40] 2025-07-27 03:20:08,808 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-26 23:20:40] 2025-07-27 03:20:08,829 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 23:20:40] 2025-07-27 03:20:08,830 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 23:20:40] 2025-07-27 03:20:08,830 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 23:20:40] 2025-07-27 03:20:08,830 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 23:20:40] 2025-07-27 03:20:08,830 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 23:20:40] 2025-07-27 03:20:08,830 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 23:20:40] 2025-07-27 03:20:08,830 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 23:20:40] 2025-07-27 03:20:08,830 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 23:20:40] 2025-07-27 03:20:08,830 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 23:20:40] 2025-07-27 03:20:08,830 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 23:20:40] 2025-07-27 03:20:08,830 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 23:20:40] 2025-07-27 03:20:08,830 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 23:20:40] 2025-07-27 03:20:08,830 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 23:20:40] 2025-07-27 03:20:08,830 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 23:20:40] 2025-07-27 03:20:08,830 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 23:20:40] 2025-07-27 03:20:08,830 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 23:20:40] 2025-07-27 03:20:08,830 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 23:20:40] 2025-07-27 03:20:08,830 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 23:20:40] 2025-07-27 03:20:08,831 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 23:20:40] 2025-07-27 03:20:08,831 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 23:20:40] 2025-07-27 03:20:08,831 | INFO     | job 6745735982 has completed (purged errors)
[2025-07-26 23:20:40] 2025-07-27 03:20:08,831 | INFO     | overall cleanup function is called
[2025-07-26 23:20:40] 2025-07-27 03:20:09,839 | INFO     | --- collectZombieJob: --- 10, [224053]
[2025-07-26 23:20:40] 2025-07-27 03:20:09,839 | INFO     | zombie collector waiting for pid 224053
[2025-07-26 23:20:40] 2025-07-27 03:20:09,839 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 23:20:40] 2025-07-27 03:20:09,839 | INFO     | collected zombie processes
[2025-07-26 23:20:40] 2025-07-27 03:20:09,839 | INFO     | will attempt to kill all subprocesses of pid=224053
[2025-07-26 23:20:40] 2025-07-27 03:20:10,183 | INFO     | process IDs to be killed: [224053] (in reverse order)
[2025-07-26 23:20:40] 2025-07-27 03:20:10,298 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 23:20:40] 2025-07-27 03:20:10,299 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 23:20:40] 2025-07-27 03:20:10,315 | INFO     | did not find any defunct processes belonging to 224053
[2025-07-26 23:20:40] 2025-07-27 03:20:10,330 | INFO     | did not find any defunct processes belonging to 224053
[2025-07-26 23:20:40] 2025-07-27 03:20:10,330 | INFO     | ready for new job
[2025-07-26 23:20:40] 2025-07-27 03:20:10,330 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 23:20:40] 2025-07-27 03:20:10,331 | INFO     | ***************************************
[2025-07-26 23:20:40] 2025-07-27 03:20:10,331 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 23:20:40] 2025-07-27 03:20:10,331 | INFO     | ***************************************
[2025-07-26 23:20:40] 2025-07-27 03:20:10,331 | INFO     | 
[2025-07-26 23:20:40] 2025-07-27 03:20:10,335 | INFO     | architecture information:
[2025-07-26 23:20:40] 2025-07-27 03:20:10,336 | INFO     | executing command: cat /etc/os-release
[2025-07-26 23:20:40] 2025-07-27 03:20:10,349 | INFO     | cat /etc/os-release:
[2025-07-26 23:20:40] NAME="CentOS Linux"
[2025-07-26 23:20:40] VERSION="7 (Core)"
[2025-07-26 23:20:40] ID="centos"
[2025-07-26 23:20:40] ID_LIKE="rhel fedora"
[2025-07-26 23:20:40] VERSION_ID="7"
[2025-07-26 23:20:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 23:20:40] ANSI_COLOR="0;31"
[2025-07-26 23:20:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 23:20:40] HOME_URL="https://www.centos.org/"
[2025-07-26 23:20:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 23:20:40] 
[2025-07-26 23:20:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 23:20:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 23:20:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 23:20:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 23:20:40] 
[2025-07-26 23:20:40] 2025-07-27 03:20:10,350 | INFO     | ***************************************
[2025-07-26 23:20:40] 2025-07-27 03:20:10,850 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-26 23:20:40] 2025-07-27 03:20:10,866 | INFO     | sufficient remaining disk space (166179373056 B)
[2025-07-26 23:20:40] 2025-07-27 03:20:10,867 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 23:20:40] 2025-07-27 03:20:10,867 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 23:20:40] 2025-07-27 03:20:10,867 | INFO     | update_server=False
[2025-07-26 23:20:40] 2025-07-27 03:20:10,867 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 23:20:40] 2025-07-27 03:20:10,867 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 23:20:40] 2025-07-27 03:20:10,867 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:20:40] 2025-07-27 03:20:10,868 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 23:20:40] 2025-07-27 03:20:10,868 | INFO     | aborting loop
[2025-07-26 23:20:40] 2025-07-27 03:20:11,357 | INFO     | all payload control threads have been joined
[2025-07-26 23:20:40] 2025-07-27 03:20:11,389 | INFO     | all data control threads have been joined
[2025-07-26 23:20:40] 2025-07-27 03:20:11,774 | INFO     | all job control threads have been joined
[2025-07-26 23:20:40] 2025-07-27 03:20:11,872 | INFO     | [job] retrieve thread has finished
[2025-07-26 23:20:40] 2025-07-27 03:20:11,873 | INFO     | [job] job monitor thread has finished
[2025-07-26 23:20:40] 2025-07-27 03:20:12,362 | INFO     | [payload] control thread has finished
[2025-07-26 23:20:40] 2025-07-27 03:20:12,394 | INFO     | [data] control thread has finished
[2025-07-26 23:20:40] 2025-07-27 03:20:12,443 | INFO     | [data] copytool_in thread has finished
[2025-07-26 23:20:40] 2025-07-27 03:20:12,577 | INFO     | [payload] failed_post thread has finished
[2025-07-26 23:20:40] 2025-07-27 03:20:12,617 | INFO     | [job] validate thread has finished
[2025-07-26 23:20:40] 2025-07-27 03:20:12,694 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 23:20:40] 2025-07-27 03:20:12,779 | INFO     | [job] control thread has finished
[2025-07-26 23:20:40] 2025-07-27 03:20:12,842 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 23:20:40] 2025-07-27 03:20:12,874 | INFO     | [data] copytool_out thread has finished
[2025-07-26 23:20:40] 2025-07-27 03:20:13,067 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 23:20:40] 2025-07-27 03:20:13,321 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 23:20:40] 2025-07-27 03:20:13,350 | INFO     | [payload] validate_post thread has finished
[2025-07-26 23:20:40] 2025-07-27 03:20:13,819 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:20:40] 2025-07-27 03:20:14,825 | INFO     | [job] queue monitor thread has finished
[2025-07-26 23:20:40] 2025-07-27 03:20:14,873 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 23:20:40] 2025-07-27 03:20:16,828 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140309739341632)>', '<ExcThread(monitor, started 140309233121024)>']
[2025-07-26 23:20:40] 2025-07-27 03:20:21,854 | INFO     | all workflow threads have been joined
[2025-07-26 23:20:40] 2025-07-27 03:20:21,854 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 23:20:40] 2025-07-27 03:20:21,854 | INFO     | traces error code: 0
[2025-07-26 23:20:40] 2025-07-27 03:20:21,854 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 23:20:40] 2025-07-27 03:20:40,692 | INFO     | PID=216022 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-26 23:20:40] 2025-07-27 03:20:40,693 | INFO     | .. there are 16 such processes running
[2025-07-26 23:20:40] 2025-07-27 03:20:40,693 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 23:20:40] 2025-07-27 03:20:40,693 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 23:20:40] 2025-07-27 03:20:40,693 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 23:20:40] 2025-07-27 03:20:40,693 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 23:20:40] 2025-07-27 03:20:40,693 | INFO     | [monitor] control thread has ended
[2025-07-26 23:20:40] 2025-07-27 03:20:40,789 [wrapper] ==== pilot stdout END ====
[2025-07-26 23:20:40] 2025-07-27 03:20:40,791 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 23:20:40] 2025-07-27 03:20:40,793 [wrapper] pilotpid: 216022
[2025-07-26 23:20:40] 2025-07-27 03:20:40,796 [wrapper] Pilot exit status: 0
[2025-07-26 23:20:40] 2025-07-27 03:20:40,804 [wrapper] pandaids: 6745735982
[2025-07-26 23:20:40] 2025-07-27 03:20:40,887 [wrapper] cleanup supervisor_pilot  520174 216023
[2025-07-26 23:20:40] 2025-07-27 03:20:40,891 [wrapper] Test setup, not cleaning
[2025-07-26 23:20:40] 2025-07-27 03:20:40,894 [wrapper] apfmon messages muted
[2025-07-26 23:20:40] 2025-07-27 03:20:40,896 [wrapper] ==== wrapper stdout END ====
[2025-07-26 23:20:40] 2025-07-27 03:20:40,897 [wrapper] ==== wrapper stderr END ====
[2025-07-26 23:20:40]  *** Error codes and diagnostics ***
[2025-07-26 23:20:40]     "exeErrorCode": 0,
[2025-07-26 23:20:40]     "exeErrorDiag": "",
[2025-07-26 23:20:40]     "pilotErrorCode": 0,
[2025-07-26 23:20:40]     "pilotErrorDiag": "",
[2025-07-26 23:20:40]  *** Listing of results directory ***
[2025-07-26 23:20:40] total 435240
[2025-07-26 23:20:40] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 17:12 pilot3.tar.gz
[2025-07-26 23:20:40] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 17:19 queuedata.json
[2025-07-26 23:20:40] -rwx------. 1 boincer umatlas     36292 Jul 26 17:20 runpilot2-wrapper.sh
[2025-07-26 23:20:40] -rw-r--r--. 1 boincer umatlas       100 Jul 26 22:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 23:20:40] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 22:23 run_atlas
[2025-07-26 23:20:40] -rw-r--r--. 1 boincer umatlas       105 Jul 26 22:23 job.xml
[2025-07-26 23:20:40] -rw-r--r--. 2 boincer umatlas 227912353 Jul 26 22:23 EVNT.45743347._002552.pool.root.1
[2025-07-26 23:20:40] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 22:23 start_atlas.sh
[2025-07-26 23:20:40] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 22:23 shared
[2025-07-26 23:20:40] -rw-r--r--. 2 boincer umatlas    542899 Jul 26 22:23 input.tar.gz
[2025-07-26 23:20:40] -rw-r--r--. 1 boincer umatlas         0 Jul 26 22:23 boinc_lockfile
[2025-07-26 23:20:40] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 22:23 pandaJob.out
[2025-07-26 23:20:40] -rw-------. 1 boincer umatlas    980117 Jul 26 22:23 agis_schedconf.cvmfs.json
[2025-07-26 23:20:40] -rw-------. 1 boincer umatlas   1593052 Jul 26 22:23 agis_ddmendpoints.agis.ALL.json
[2025-07-26 23:20:40] drwx------. 4 boincer umatlas      4096 Jul 26 22:23 pilot3
[2025-07-26 23:20:40] -rw-------. 1 boincer umatlas 212602976 Jul 26 23:19 HITS.45743349._044577.pool.root.1
[2025-07-26 23:20:40] -rw-r--r--. 1 boincer umatlas       529 Jul 26 23:19 boinc_task_state.xml
[2025-07-26 23:20:40] -rw-r--r--. 1 boincer umatlas      7172 Jul 26 23:19 init_data.xml
[2025-07-26 23:20:40] -rw-------. 1 boincer umatlas      1029 Jul 26 23:19 memory_monitor_summary.json
[2025-07-26 23:20:40] -rw-------. 1 boincer umatlas        95 Jul 26 23:20 pilot_heartbeat.json
[2025-07-26 23:20:40] -rw-------. 1 boincer umatlas    301163 Jul 26 23:20 log.45743349._044577.job.log.tgz.1
[2025-07-26 23:20:40] -rw-------. 1 boincer umatlas      7768 Jul 26 23:20 heartbeat.json
[2025-07-26 23:20:40] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 23:20 boinc_mmap_file
[2025-07-26 23:20:40] -rw-r--r--. 1 boincer umatlas        27 Jul 26 23:20 wrapper_checkpoint.txt
[2025-07-26 23:20:40] -rw-------. 1 boincer umatlas       822 Jul 26 23:20 pilotlog.txt
[2025-07-26 23:20:40] -rw-------. 1 boincer umatlas    345650 Jul 26 23:20 log.45743349._044577.job.log.1
[2025-07-26 23:20:40] -rw-------. 1 boincer umatlas       357 Jul 26 23:20 output.list
[2025-07-26 23:20:40] -rw-r--r--. 1 boincer umatlas       620 Jul 26 23:20 runtime_log
[2025-07-26 23:20:40] -rw-------. 1 boincer umatlas    665600 Jul 26 23:20 result.tar.gz
[2025-07-26 23:20:40] -rw-r--r--. 1 boincer umatlas      8660 Jul 26 23:20 runtime_log.err
[2025-07-26 23:20:40] -rw-------. 1 boincer umatlas       651 Jul 26 23:20 8RhMDmGV1z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8ATLDmNDtKSo.diag
[2025-07-26 23:20:40] -rw-r--r--. 1 boincer umatlas     21382 Jul 26 23:20 stderr.txt
[2025-07-26 23:20:40] HITS file was successfully produced:
[2025-07-26 23:20:40] -rw-------. 1 boincer umatlas 212602976 Jul 26 23:19 shared/HITS.pool.root.1
[2025-07-26 23:20:40]  *** Contents of shared directory: ***
[2025-07-26 23:20:40] total 431400
[2025-07-26 23:20:40] -rw-r--r--. 2 boincer umatlas 227912353 Jul 26 22:23 ATLAS.root_0
[2025-07-26 23:20:40] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 22:23 start_atlas.sh
[2025-07-26 23:20:40] -rw-r--r--. 2 boincer umatlas    542899 Jul 26 22:23 input.tar.gz
[2025-07-26 23:20:40] -rw-------. 1 boincer umatlas 212602976 Jul 26 23:19 HITS.pool.root.1
[2025-07-26 23:20:40] -rw-------. 1 boincer umatlas    665600 Jul 26 23:20 result.tar.gz
23:20:42 (212445): run_atlas exited; CPU time 25028.149399
23:20:42 (212445): called boinc_finish(0)

</stderr_txt>
]]>

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