Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:25:50 (2197862): wrapper (7.7.26015): starting
22:25:50 (2197862): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 22:25:50] Arguments: --nthreads 8
[2025-07-26 22:25:50] Threads: 8
[2025-07-26 22:25:50] Checking for CVMFS
[2025-07-26 22:25:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 22:25:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 22:25:50] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 22:25:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 22:25:51] 2.13.0.0 1923533 19062 293700 148797 1 120 20346908 32935937 17069 16776704 0 89386816 99.552 142420496 19384 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 22:25:51] CVMFS is ok
[2025-07-26 22:25:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 22:25:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 22:25:51] Further information can be found at the LHC@home message board.
[2025-07-26 22:25:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 22:25:51] Checking for apptainer binary...
[2025-07-26 22:25:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 22:25:51] Running /usr/bin/apptainer --version
[2025-07-26 22:25:51] apptainer version 1.4.1-1.el9
[2025-07-26 22:25:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 22:25:51] c7-3-17.aglt2.org
[2025-07-26 22:25:51] apptainer works
[2025-07-26 22:25:51] Set ATHENA_PROC_NUMBER=8
[2025-07-26 22:25:51] Set ATHENA_CORE_NUMBER=8
[2025-07-26 22:25:51] Starting ATLAS job with PandaID=6745735813
[2025-07-26 22:25:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 23:55:24]  *** The last 200 lines of the pilot log: ***
[2025-07-26 23:55:24]  status=None
[2025-07-26 23:55:24]  status_code=0
[2025-07-26 23:55:24]  storage_token=
[2025-07-26 23:55:24]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6745735813/log.45743349._044527.job.log.tgz.1
[2025-07-26 23:55:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3a/f1/log.45743349._044527.job.log.tgz.1
[2025-07-26 23:55:24]  workdir=None
[2025-07-26 23:55:24] ]
[2025-07-26 23:55:24] 2025-07-27 03:54:41,672 | INFO     | transferring file log.45743349._044527.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6745735813/log.45743349._044527.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 23:55:24] 2025-07-27 03:54:41,674 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6745735813/log.45743349._044527.job.log.tgz.1 /tmp/boinchome/slots/2/log.45743349._044527.job
[2025-07-26 23:55:24] 2025-07-27 03:54:41,706 | INFO     | adding to output.list: log.45743349._044527.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3a/f1/log.45743349._044527.job.log.tg
[2025-07-26 23:55:24] 2025-07-27 03:54:41,707 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 23:55:24] 2025-07-27 03:54:41,708 | INFO     | summary of transferred files:
[2025-07-26 23:55:24] 2025-07-27 03:54:41,708 | INFO     |  -- lfn=log.45743349._044527.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 23:55:24] 2025-07-27 03:54:41,708 | INFO     | stage-out finished correctly
[2025-07-26 23:55:24] 2025-07-27 03:54:42,143 | WARNING  | process 2208553 can no longer be monitored (due to stat problems) - aborting
[2025-07-26 23:55:24] 2025-07-27 03:54:42,143 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6745735813/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 23:55:24] 2025-07-27 03:54:42,544 | INFO     | number of running child processes to parent process 2208553: 1
[2025-07-26 23:55:24] 2025-07-27 03:54:42,545 | INFO     | maximum number of monitored processes: 6
[2025-07-26 23:55:24] 2025-07-27 03:54:43,699 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 23:55:24] 2025-07-27 03:54:45,049 | INFO     | monitor loop #383: job 0:6745735813 is in state 'finished'
[2025-07-26 23:55:24] 2025-07-27 03:54:45,049 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 23:55:24] 2025-07-27 03:54:46,036 | INFO     | job 6745735813 has state=finished
[2025-07-26 23:55:24] 2025-07-27 03:54:46,036 | INFO     | preparing for final server update for job 6745735813 in state='finished'
[2025-07-26 23:55:24] 2025-07-27 03:54:46,036 | INFO     | this job has now completed (state=finished)
[2025-07-26 23:55:24] 2025-07-27 03:54:46,037 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 23:55:24] 2025-07-27 03:54:46,037 | INFO     | log transfer has been attempted: DONE
[2025-07-26 23:55:24] 2025-07-27 03:54:46,037 | INFO     | job 6745735813 has finished - writing final server update
[2025-07-26 23:55:24] 2025-07-27 03:54:46,037 | INFO     | total number of processed events: 400 (read)
[2025-07-26 23:55:24] 2025-07-27 03:54:46,037 | INFO     | executing command: lscpu
[2025-07-26 23:55:24] 2025-07-27 03:54:46,105 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 23:55:24] 2025-07-27 03:54:47,552 | INFO     | monitor loop #384: job 0:6745735813 is in state 'finished'
[2025-07-26 23:55:24] 2025-07-27 03:54:47,553 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 23:55:24] 2025-07-27 03:54:49,413 | INFO     | PID=2201742 has CPU usage=14.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-26 23:55:24] 2025-07-27 03:54:49,413 | INFO     | .. there are 17 such processes running
[2025-07-26 23:55:24] 2025-07-27 03:54:50,057 | INFO     | monitor loop #385: job 0:6745735813 is in state 'finished'
[2025-07-26 23:55:24] 2025-07-27 03:54:50,057 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 23:55:24] 2025-07-27 03:54:51,802 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 23:55:24] 2025-07-27 03:54:51,812 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3035.106739583334
[2025-07-26 23:55:24] 2025-07-27 03:54:51,829 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6745735813/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 23:55:24] 2025-07-27 03:54:51,830 | INFO     | extracted standard info from prmon json
[2025-07-26 23:55:24] 2025-07-27 03:54:51,830 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 23:55:24] 2025-07-27 03:54:51,830 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 23:55:24] 2025-07-27 03:54:51,830 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 23:55:24] 2025-07-27 03:54:51,831 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 23:55:24] 2025-07-27 03:54:51,832 | INFO     | fitting pss+swap vs Time
[2025-07-26 23:55:24] 2025-07-27 03:54:51,832 | INFO     | sum of square deviations: 158737860.0
[2025-07-26 23:55:24] 2025-07-27 03:54:51,833 | INFO     | sum of deviations: -18143718274.5
[2025-07-26 23:55:24] 2025-07-27 03:54:51,833 | INFO     | mean x: 1753585906.5
[2025-07-26 23:55:24] 2025-07-27 03:54:51,833 | INFO     | mean y: 2388945.9375
[2025-07-26 23:55:24] 2025-07-27 03:54:51,833 | INFO     | -- intersect: 200437046800.52682
[2025-07-26 23:55:24] 2025-07-27 03:54:51,833 | INFO     | intersect: 200437046800.52682
[2025-07-26 23:55:24] 2025-07-27 03:54:51,833 | INFO     | chi2: 0.1475158894241561
[2025-07-26 23:55:24] 2025-07-27 03:54:51,833 | INFO     | -- intersect: 200437046800.52682
[2025-07-26 23:55:24] 2025-07-27 03:54:51,833 | INFO     | current memory leak: -114.30 B/s (using 80 data points, chi2=0.15)
[2025-07-26 23:55:24] 2025-07-27 03:54:51,834 | INFO     | could have reported an average CPU frequency of 3004 MHz (6 samples)
[2025-07-26 23:55:24] 2025-07-27 03:54:51,834 | INFO     | ..............................
[2025-07-26 23:55:24] 2025-07-27 03:54:51,834 | INFO     | . Timing measurements:
[2025-07-26 23:55:24] 2025-07-27 03:54:51,834 | INFO     | . get job = 0 s
[2025-07-26 23:55:24] 2025-07-27 03:54:51,834 | INFO     | . initial setup = 2 s
[2025-07-26 23:55:24] 2025-07-27 03:54:51,834 | INFO     | . payload setup = 7 s
[2025-07-26 23:55:24] 2025-07-27 03:54:51,834 | INFO     | . stage-in = 0 s
[2025-07-26 23:55:24] 2025-07-27 03:54:51,834 | INFO     | . payload execution = 5290 s
[2025-07-26 23:55:24] 2025-07-27 03:54:51,834 | INFO     | . stage-out = 0 s
[2025-07-26 23:55:24] 2025-07-27 03:54:51,834 | INFO     | . log creation = 0 s
[2025-07-26 23:55:24] 2025-07-27 03:54:51,834 | INFO     | ..............................
[2025-07-26 23:55:24] 2025-07-27 03:54:51,906 | INFO     | 
[2025-07-26 23:55:24] 2025-07-27 03:54:51,906 | INFO     | job summary report
[2025-07-26 23:55:24] 2025-07-27 03:54:51,906 | INFO     | --------------------------------------------------
[2025-07-26 23:55:24] 2025-07-27 03:54:51,906 | INFO     | PanDA job id: 6745735813
[2025-07-26 23:55:24] 2025-07-27 03:54:51,906 | INFO     | task id: 45743349
[2025-07-26 23:55:24] 2025-07-27 03:54:51,906 | INFO     | errors: (none)
[2025-07-26 23:55:24] 2025-07-27 03:54:51,907 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 23:55:24] 2025-07-27 03:54:51,907 | INFO     | pilot state: finished 
[2025-07-26 23:55:24] 2025-07-27 03:54:51,907 | INFO     | transexitcode: 0
[2025-07-26 23:55:24] 2025-07-27 03:54:51,907 | INFO     | exeerrorcode: 0
[2025-07-26 23:55:24] 2025-07-27 03:54:51,907 | INFO     | exeerrordiag: 
[2025-07-26 23:55:24] 2025-07-27 03:54:51,907 | INFO     | exitcode: 0
[2025-07-26 23:55:24] 2025-07-27 03:54:51,907 | INFO     | exitmsg: OK
[2025-07-26 23:55:24] 2025-07-27 03:54:51,907 | INFO     | cpuconsumptiontime: 37154 s
[2025-07-26 23:55:24] 2025-07-27 03:54:51,907 | INFO     | nevents: 400
[2025-07-26 23:55:24] 2025-07-27 03:54:51,907 | INFO     | neventsw: 0
[2025-07-26 23:55:24] 2025-07-27 03:54:51,907 | INFO     | pid: 2208553
[2025-07-26 23:55:24] 2025-07-27 03:54:51,907 | INFO     | pgrp: 2208553
[2025-07-26 23:55:24] 2025-07-27 03:54:51,908 | INFO     | corecount: 8
[2025-07-26 23:55:24] 2025-07-27 03:54:51,908 | INFO     | event service: False
[2025-07-26 23:55:24] 2025-07-27 03:54:51,908 | INFO     | sizes: {0: 2397304, 1: 2397503, 6: 2397765, 11: 2397793, 5302: 2424217, 5303: 2433215, 5305: 2433399, 5313: 2433593}
[2025-07-26 23:55:24] 2025-07-27 03:54:51,908 | INFO     | --------------------------------------------------
[2025-07-26 23:55:24] 2025-07-27 03:54:51,908 | INFO     | 
[2025-07-26 23:55:24] 2025-07-27 03:54:51,908 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-26 23:55:24] 2025-07-27 03:54:51,942 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 23:55:24] 2025-07-27 03:54:51,942 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 23:55:24] 2025-07-27 03:54:51,942 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 23:55:24] 2025-07-27 03:54:51,942 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 23:55:24] 2025-07-27 03:54:51,942 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 23:55:24] 2025-07-27 03:54:51,942 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 23:55:24] 2025-07-27 03:54:51,942 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 23:55:24] 2025-07-27 03:54:51,942 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 23:55:24] 2025-07-27 03:54:51,943 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 23:55:24] 2025-07-27 03:54:51,943 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 23:55:24] 2025-07-27 03:54:51,943 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 23:55:24] 2025-07-27 03:54:51,943 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 23:55:24] 2025-07-27 03:54:51,943 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 23:55:24] 2025-07-27 03:54:51,943 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 23:55:24] 2025-07-27 03:54:51,943 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 23:55:24] 2025-07-27 03:54:51,943 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 23:55:24] 2025-07-27 03:54:51,943 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 23:55:24] 2025-07-27 03:54:51,943 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 23:55:24] 2025-07-27 03:54:51,943 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 23:55:24] 2025-07-27 03:54:51,943 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 23:55:24] 2025-07-27 03:54:51,944 | INFO     | job 6745735813 has completed (purged errors)
[2025-07-26 23:55:24] 2025-07-27 03:54:51,944 | INFO     | overall cleanup function is called
[2025-07-26 23:55:24] 2025-07-27 03:54:52,951 | INFO     | --- collectZombieJob: --- 10, [2208553]
[2025-07-26 23:55:24] 2025-07-27 03:54:52,951 | INFO     | zombie collector waiting for pid 2208553
[2025-07-26 23:55:24] 2025-07-27 03:54:52,952 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 23:55:24] 2025-07-27 03:54:52,952 | INFO     | collected zombie processes
[2025-07-26 23:55:24] 2025-07-27 03:54:52,952 | INFO     | will attempt to kill all subprocesses of pid=2208553
[2025-07-26 23:55:24] 2025-07-27 03:54:53,417 | INFO     | process IDs to be killed: [2208553] (in reverse order)
[2025-07-26 23:55:24] 2025-07-27 03:54:53,564 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 23:55:24] 2025-07-27 03:54:53,565 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 23:55:24] 2025-07-27 03:54:53,582 | INFO     | did not find any defunct processes belonging to 2208553
[2025-07-26 23:55:24] 2025-07-27 03:54:53,596 | INFO     | did not find any defunct processes belonging to 2208553
[2025-07-26 23:55:24] 2025-07-27 03:54:53,597 | INFO     | ready for new job
[2025-07-26 23:55:24] 2025-07-27 03:54:53,597 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 23:55:24] 2025-07-27 03:54:53,598 | INFO     | ***************************************
[2025-07-26 23:55:24] 2025-07-27 03:54:53,599 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 23:55:24] 2025-07-27 03:54:53,599 | INFO     | ***************************************
[2025-07-26 23:55:24] 2025-07-27 03:54:53,599 | INFO     | 
[2025-07-26 23:55:24] 2025-07-27 03:54:53,615 | INFO     | architecture information:
[2025-07-26 23:55:24] 2025-07-27 03:54:53,616 | INFO     | executing command: cat /etc/os-release
[2025-07-26 23:55:24] 2025-07-27 03:54:53,634 | INFO     | cat /etc/os-release:
[2025-07-26 23:55:24] NAME="CentOS Linux"
[2025-07-26 23:55:24] VERSION="7 (Core)"
[2025-07-26 23:55:24] ID="centos"
[2025-07-26 23:55:24] ID_LIKE="rhel fedora"
[2025-07-26 23:55:24] VERSION_ID="7"
[2025-07-26 23:55:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 23:55:24] ANSI_COLOR="0;31"
[2025-07-26 23:55:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 23:55:24] HOME_URL="https://www.centos.org/"
[2025-07-26 23:55:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 23:55:24] 
[2025-07-26 23:55:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 23:55:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 23:55:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 23:55:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 23:55:24] 
[2025-07-26 23:55:24] 2025-07-27 03:54:53,634 | INFO     | ***************************************
[2025-07-26 23:55:24] 2025-07-27 03:54:54,136 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-26 23:55:24] 2025-07-27 03:54:54,159 | INFO     | sufficient remaining disk space (75742838784 B)
[2025-07-26 23:55:24] 2025-07-27 03:54:54,159 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 23:55:24] 2025-07-27 03:54:54,160 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 23:55:24] 2025-07-27 03:54:54,160 | INFO     | update_server=False
[2025-07-26 23:55:24] 2025-07-27 03:54:54,160 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 23:55:24] 2025-07-27 03:54:54,160 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:55:24] 2025-07-27 03:54:54,161 | INFO     | aborting loop
[2025-07-26 23:55:24] 2025-07-27 03:54:54,206 | INFO     | all data control threads have been joined
[2025-07-26 23:55:24] 2025-07-27 03:54:54,288 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 23:55:24] 2025-07-27 03:54:54,527 | INFO     | all payload control threads have been joined
[2025-07-26 23:55:24] 2025-07-27 03:54:54,818 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 23:55:24] 2025-07-27 03:54:55,046 | INFO     | all job control threads have been joined
[2025-07-26 23:55:24] 2025-07-27 03:54:55,164 | INFO     | [job] retrieve thread has finished
[2025-07-26 23:55:24] 2025-07-27 03:54:55,165 | INFO     | [job] job monitor thread has finished
[2025-07-26 23:55:24] 2025-07-27 03:54:55,212 | INFO     | [data] control thread has finished
[2025-07-26 23:55:24] 2025-07-27 03:54:55,381 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 23:55:24] 2025-07-27 03:54:55,424 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 23:55:24] 2025-07-27 03:54:55,532 | INFO     | [payload] control thread has finished
[2025-07-26 23:55:24] 2025-07-27 03:54:55,620 | INFO     | [data] copytool_in thread has finished
[2025-07-26 23:55:24] 2025-07-27 03:54:56,047 | INFO     | [job] control thread has finished
[2025-07-26 23:55:24] 2025-07-27 03:54:56,115 | INFO     | [payload] failed_post thread has finished
[2025-07-26 23:55:24] 2025-07-27 03:54:56,374 | INFO     | [job] validate thread has finished
[2025-07-26 23:55:24] 2025-07-27 03:54:56,400 | INFO     | [payload] validate_post thread has finished
[2025-07-26 23:55:24] 2025-07-27 03:54:56,546 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 23:55:24] 2025-07-27 03:54:56,824 | INFO     | [data] copytool_out thread has finished
[2025-07-26 23:55:24] 2025-07-27 03:54:56,916 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:55:24] 2025-07-27 03:54:57,922 | INFO     | [job] queue monitor thread has finished
[2025-07-26 23:55:24] 2025-07-27 03:54:58,294 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 23:55:24] 2025-07-27 03:55:05,211 | INFO     | job.realtimelogging is not enabled
[2025-07-26 23:55:24] 2025-07-27 03:55:06,216 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 23:55:24] 2025-07-27 03:55:07,829 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140569946654528)>', '<ExcThread(monitor, started 140569162536704)>']
[2025-07-26 23:55:24] 2025-07-27 03:55:12,854 | INFO     | all workflow threads have been joined
[2025-07-26 23:55:24] 2025-07-27 03:55:12,854 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 23:55:24] 2025-07-27 03:55:12,855 | INFO     | traces error code: 0
[2025-07-26 23:55:24] 2025-07-27 03:55:12,855 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 23:55:24] 2025-07-27 03:55:23,978 | INFO     | PID=2201742 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 23:55:24] 2025-07-27 03:55:23,979 | INFO     | .. there are 17 such processes running
[2025-07-26 23:55:24] 2025-07-27 03:55:23,979 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 23:55:24] 2025-07-27 03:55:23,979 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 23:55:24] 2025-07-27 03:55:23,979 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 23:55:24] 2025-07-27 03:55:23,979 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 23:55:24] 2025-07-27 03:55:23,979 | INFO     | [monitor] control thread has ended
[2025-07-26 23:55:24] 2025-07-27 03:55:24,121 [wrapper] ==== pilot stdout END ====
[2025-07-26 23:55:24] 2025-07-27 03:55:24,124 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 23:55:24] 2025-07-27 03:55:24,133 [wrapper] pilotpid: 2201742
[2025-07-26 23:55:24] 2025-07-27 03:55:24,137 [wrapper] Pilot exit status: 0
[2025-07-26 23:55:24] 2025-07-27 03:55:24,154 [wrapper] pandaids: 6745735813
[2025-07-26 23:55:24] 2025-07-27 03:55:24,272 [wrapper] cleanup supervisor_pilot 2616578 2201743
[2025-07-26 23:55:24] 2025-07-27 03:55:24,277 [wrapper] Test setup, not cleaning
[2025-07-26 23:55:24] 2025-07-27 03:55:24,282 [wrapper] apfmon messages muted
[2025-07-26 23:55:24] 2025-07-27 03:55:24,286 [wrapper] ==== wrapper stdout END ====
[2025-07-26 23:55:24] 2025-07-27 03:55:24,289 [wrapper] ==== wrapper stderr END ====
[2025-07-26 23:55:24]  *** Error codes and diagnostics ***
[2025-07-26 23:55:24]     "exeErrorCode": 0,
[2025-07-26 23:55:24]     "exeErrorDiag": "",
[2025-07-26 23:55:24]     "pilotErrorCode": 0,
[2025-07-26 23:55:24]     "pilotErrorDiag": "",
[2025-07-26 23:55:24]  *** Listing of results directory ***
[2025-07-26 23:55:24] total 431348
[2025-07-26 23:55:24] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 17:12 pilot3.tar.gz
[2025-07-26 23:55:24] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 17:13 queuedata.json
[2025-07-26 23:55:24] -rwx------. 1 boincer umatlas     36292 Jul 26 17:16 runpilot2-wrapper.sh
[2025-07-26 23:55:24] -rw-r--r--. 1 boincer umatlas       100 Jul 26 22:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 23:55:24] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 22:25 run_atlas
[2025-07-26 23:55:24] -rw-r--r--. 1 boincer umatlas       105 Jul 26 22:25 job.xml
[2025-07-26 23:55:24] -rw-r--r--. 2 boincer umatlas 228797797 Jul 26 22:25 EVNT.45743347._002550.pool.root.1
[2025-07-26 23:55:24] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 22:25 start_atlas.sh
[2025-07-26 23:55:24] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 22:25 shared
[2025-07-26 23:55:24] -rw-r--r--. 2 boincer umatlas    542897 Jul 26 22:25 input.tar.gz
[2025-07-26 23:55:24] -rw-r--r--. 1 boincer umatlas         0 Jul 26 22:25 boinc_lockfile
[2025-07-26 23:55:24] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 22:25 pandaJob.out
[2025-07-26 23:55:24] -rw-------. 1 boincer umatlas    980117 Jul 26 22:26 agis_schedconf.cvmfs.json
[2025-07-26 23:55:24] -rw-------. 1 boincer umatlas   1593052 Jul 26 22:26 agis_ddmendpoints.agis.ALL.json
[2025-07-26 23:55:24] drwx------. 4 boincer umatlas      4096 Jul 26 22:26 pilot3
[2025-07-26 23:55:24] -rw-------. 1 boincer umatlas 207360377 Jul 26 23:54 HITS.45743349._044527.pool.root.1
[2025-07-26 23:55:24] -rw-r--r--. 1 boincer umatlas       529 Jul 26 23:54 boinc_task_state.xml
[2025-07-26 23:55:24] -rw-------. 1 boincer umatlas        95 Jul 26 23:54 pilot_heartbeat.json
[2025-07-26 23:55:24] -rw-r--r--. 1 boincer umatlas      6931 Jul 26 23:54 init_data.xml
[2025-07-26 23:55:24] -rw-------. 1 boincer umatlas      1031 Jul 26 23:54 memory_monitor_summary.json
[2025-07-26 23:55:24] -rw-------. 1 boincer umatlas    319797 Jul 26 23:54 log.45743349._044527.job.log.tgz.1
[2025-07-26 23:55:24] -rw-------. 1 boincer umatlas      7774 Jul 26 23:54 heartbeat.json
[2025-07-26 23:55:24] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 23:55 boinc_mmap_file
[2025-07-26 23:55:24] -rw-r--r--. 1 boincer umatlas        27 Jul 26 23:55 wrapper_checkpoint.txt
[2025-07-26 23:55:24] -rw-------. 1 boincer umatlas       823 Jul 26 23:55 pilotlog.txt
[2025-07-26 23:55:24] -rw-------. 1 boincer umatlas    511894 Jul 26 23:55 log.45743349._044527.job.log.1
[2025-07-26 23:55:24] -rw-------. 1 boincer umatlas       357 Jul 26 23:55 output.list
[2025-07-26 23:55:24] -rw-r--r--. 1 boincer umatlas       620 Jul 26 23:55 runtime_log
[2025-07-26 23:55:24] -rw-------. 1 boincer umatlas    849920 Jul 26 23:55 result.tar.gz
[2025-07-26 23:55:24] -rw-------. 1 boincer umatlas       653 Jul 26 23:55 X9tNDmLR1z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTATLDmQTV3Xm.diag
[2025-07-26 23:55:24] -rw-r--r--. 1 boincer umatlas      8655 Jul 26 23:55 runtime_log.err
[2025-07-26 23:55:24] -rw-r--r--. 1 boincer umatlas     22142 Jul 26 23:55 stderr.txt
[2025-07-26 23:55:24] HITS file was successfully produced:
[2025-07-26 23:55:24] -rw-------. 1 boincer umatlas 207360377 Jul 26 23:54 shared/HITS.pool.root.1
[2025-07-26 23:55:24]  *** Contents of shared directory: ***
[2025-07-26 23:55:24] total 427328
[2025-07-26 23:55:24] -rw-r--r--. 2 boincer umatlas 228797797 Jul 26 22:25 ATLAS.root_0
[2025-07-26 23:55:24] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 22:25 start_atlas.sh
[2025-07-26 23:55:24] -rw-r--r--. 2 boincer umatlas    542897 Jul 26 22:25 input.tar.gz
[2025-07-26 23:55:24] -rw-------. 1 boincer umatlas 207360377 Jul 26 23:54 HITS.pool.root.1
[2025-07-26 23:55:24] -rw-------. 1 boincer umatlas    849920 Jul 26 23:55 result.tar.gz
23:55:25 (2197862): run_atlas exited; CPU time 37312.613756
23:55:25 (2197862): called boinc_finish(0)

</stderr_txt>
]]>

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