Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:23:01 (30997): wrapper (7.7.26015): starting
22:23:01 (30997): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 22:23:01] Arguments: --nthreads 8
[2025-07-26 22:23:01] Threads: 8
[2025-07-26 22:23:01] Checking for CVMFS
[2025-07-26 22:23:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 22:23:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 22:23:01] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 22:23:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 22:23:01] 2.11.2.0 3213 516333 245684 148797 1 57 19943409 20275200 917 130560 0 179202645 99.988 22515392 19706 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 22:23:01] CVMFS is ok
[2025-07-26 22:23:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 22:23:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 22:23:01] Further information can be found at the LHC@home message board.
[2025-07-26 22:23:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 22:23:01] Checking for apptainer binary...
[2025-07-26 22:23:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 22:23:01] Running /usr/bin/apptainer --version
[2025-07-26 22:23:01] apptainer version 1.3.2-1.el7
[2025-07-26 22:23:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 22:23:01] c-205-38.aglt2.org
[2025-07-26 22:23:01] apptainer works
[2025-07-26 22:23:01] Set ATHENA_PROC_NUMBER=8
[2025-07-26 22:23:01] Set ATHENA_CORE_NUMBER=8
[2025-07-26 22:23:01] Starting ATLAS job with PandaID=6745735810
[2025-07-26 22:23:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 23:28:31]  *** The last 200 lines of the pilot log: ***
[2025-07-26 23:28:31]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-26 23:28:31]  is_altstaged=None
[2025-07-26 23:28:31]  is_tar=False
[2025-07-26 23:28:31]  lfn=log.45743349._044524.job.log.tgz.1
[2025-07-26 23:28:31]  mtime=0
[2025-07-26 23:28:31]  protocol_id=None
[2025-07-26 23:28:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 23:28:31]  replicas=None
[2025-07-26 23:28:31]  scope=mc23_13p6TeV
[2025-07-26 23:28:31]  status=None
[2025-07-26 23:28:31]  status_code=0
[2025-07-26 23:28:31]  storage_token=
[2025-07-26 23:28:31]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6745735810/log.45743349._044524.job.log.tgz.1
[2025-07-26 23:28:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bd/1e/log.45743349._044524.job.log.tgz.1
[2025-07-26 23:28:31]  workdir=None
[2025-07-26 23:28:31] ]
[2025-07-26 23:28:31] 2025-07-27 03:27:56,029 | INFO     | transferring file log.45743349._044524.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6745735810/log.45743349._044524.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 23:28:31] 2025-07-27 03:27:56,029 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6745735810/log.45743349._044524.job.log.tgz.1 /tmp/boinchome/slots/1/log.45743349._044524.job
[2025-07-26 23:28:31] 2025-07-27 03:27:56,048 | INFO     | adding to output.list: log.45743349._044524.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bd/1e/log.45743349._044524.job.log.tg
[2025-07-26 23:28:31] 2025-07-27 03:27:56,049 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 23:28:31] 2025-07-27 03:27:56,049 | INFO     | summary of transferred files:
[2025-07-26 23:28:31] 2025-07-27 03:27:56,049 | INFO     |  -- lfn=log.45743349._044524.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 23:28:31] 2025-07-27 03:27:56,049 | INFO     | stage-out finished correctly
[2025-07-26 23:28:31] 2025-07-27 03:27:56,215 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 23:28:31] 2025-07-27 03:27:56,298 | INFO     | job 6745735810 has state=finished
[2025-07-26 23:28:31] 2025-07-27 03:27:56,298 | INFO     | preparing for final server update for job 6745735810 in state='finished'
[2025-07-26 23:28:31] 2025-07-27 03:27:56,299 | INFO     | this job has now completed (state=finished)
[2025-07-26 23:28:31] 2025-07-27 03:27:56,299 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 23:28:31] 2025-07-27 03:27:56,299 | INFO     | log transfer has been attempted: DONE
[2025-07-26 23:28:31] 2025-07-27 03:27:56,299 | INFO     | job 6745735810 has finished - writing final server update
[2025-07-26 23:28:31] 2025-07-27 03:27:56,299 | INFO     | total number of processed events: 400 (read)
[2025-07-26 23:28:31] 2025-07-27 03:27:56,300 | INFO     | executing command: lscpu
[2025-07-26 23:28:31] 2025-07-27 03:27:56,327 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 23:28:31] 2025-07-27 03:27:57,301 | WARNING  | process 8721 can no longer be monitored (due to stat problems) - aborting
[2025-07-26 23:28:31] 2025-07-27 03:27:57,302 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6745735810/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 23:28:31] 2025-07-27 03:27:57,351 | INFO     | number of running child processes to parent process 8721: 1
[2025-07-26 23:28:31] 2025-07-27 03:27:57,351 | INFO     | maximum number of monitored processes: 6
[2025-07-26 23:28:31] 2025-07-27 03:27:58,649 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 23:28:31] 2025-07-27 03:27:58,651 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2692.7975624999995
[2025-07-26 23:28:31] 2025-07-27 03:27:58,652 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6745735810/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 23:28:31] 2025-07-27 03:27:58,652 | INFO     | extracted standard info from prmon json
[2025-07-26 23:28:31] 2025-07-27 03:27:58,652 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 23:28:31] 2025-07-27 03:27:58,652 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 23:28:31] 2025-07-27 03:27:58,653 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 23:28:31] 2025-07-27 03:27:58,653 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 23:28:31] 2025-07-27 03:27:58,654 | INFO     | fitting pss+swap vs Time
[2025-07-26 23:28:31] 2025-07-27 03:27:58,654 | INFO     | sum of square deviations: 57407588.0
[2025-07-26 23:28:31] 2025-07-27 03:27:58,654 | INFO     | sum of deviations: -3880575451.0000005
[2025-07-26 23:28:31] 2025-07-27 03:27:58,654 | INFO     | mean x: 1753585022.0
[2025-07-26 23:28:31] 2025-07-27 03:27:58,654 | INFO     | mean y: 2761055.807017544
[2025-07-26 23:28:31] 2025-07-27 03:27:58,654 | INFO     | -- intersect: 118539686655.51166
[2025-07-26 23:28:31] 2025-07-27 03:27:58,654 | INFO     | intersect: 118539686655.51166
[2025-07-26 23:28:31] 2025-07-27 03:27:58,654 | INFO     | chi2: 0.051974444036263494
[2025-07-26 23:28:31] 2025-07-27 03:27:58,654 | INFO     | -- intersect: 118539686655.51166
[2025-07-26 23:28:31] 2025-07-27 03:27:58,654 | INFO     | current memory leak: -67.60 B/s (using 57 data points, chi2=0.05)
[2025-07-26 23:28:31] 2025-07-27 03:27:58,654 | INFO     | could have reported an average CPU frequency of 3043 MHz (6 samples)
[2025-07-26 23:28:31] 2025-07-27 03:27:58,655 | INFO     | ..............................
[2025-07-26 23:28:31] 2025-07-27 03:27:58,655 | INFO     | . Timing measurements:
[2025-07-26 23:28:31] 2025-07-27 03:27:58,655 | INFO     | . get job = 0 s
[2025-07-26 23:28:31] 2025-07-27 03:27:58,655 | INFO     | . initial setup = 2 s
[2025-07-26 23:28:31] 2025-07-27 03:27:58,655 | INFO     | . payload setup = 4 s
[2025-07-26 23:28:31] 2025-07-27 03:27:58,655 | INFO     | . stage-in = 0 s
[2025-07-26 23:28:31] 2025-07-27 03:27:58,655 | INFO     | . payload execution = 3864 s
[2025-07-26 23:28:31] 2025-07-27 03:27:58,655 | INFO     | . stage-out = 0 s
[2025-07-26 23:28:31] 2025-07-27 03:27:58,655 | INFO     | . log creation = 0 s
[2025-07-26 23:28:31] 2025-07-27 03:27:58,655 | INFO     | ..............................
[2025-07-26 23:28:31] 2025-07-27 03:27:58,700 | INFO     | 
[2025-07-26 23:28:31] 2025-07-27 03:27:58,701 | INFO     | job summary report
[2025-07-26 23:28:31] 2025-07-27 03:27:58,701 | INFO     | --------------------------------------------------
[2025-07-26 23:28:31] 2025-07-27 03:27:58,701 | INFO     | PanDA job id: 6745735810
[2025-07-26 23:28:31] 2025-07-27 03:27:58,701 | INFO     | task id: 45743349
[2025-07-26 23:28:31] 2025-07-27 03:27:58,701 | INFO     | errors: (none)
[2025-07-26 23:28:31] 2025-07-27 03:27:58,701 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 23:28:31] 2025-07-27 03:27:58,701 | INFO     | pilot state: finished 
[2025-07-26 23:28:31] 2025-07-27 03:27:58,701 | INFO     | transexitcode: 0
[2025-07-26 23:28:31] 2025-07-27 03:27:58,701 | INFO     | exeerrorcode: 0
[2025-07-26 23:28:31] 2025-07-27 03:27:58,701 | INFO     | exeerrordiag: 
[2025-07-26 23:28:31] 2025-07-27 03:27:58,701 | INFO     | exitcode: 0
[2025-07-26 23:28:31] 2025-07-27 03:27:58,702 | INFO     | exitmsg: OK
[2025-07-26 23:28:31] 2025-07-27 03:27:58,702 | INFO     | cpuconsumptiontime: 28369 s
[2025-07-26 23:28:31] 2025-07-27 03:27:58,702 | INFO     | nevents: 400
[2025-07-26 23:28:31] 2025-07-27 03:27:58,702 | INFO     | neventsw: 0
[2025-07-26 23:28:31] 2025-07-27 03:27:58,702 | INFO     | pid: 8721
[2025-07-26 23:28:31] 2025-07-27 03:27:58,702 | INFO     | pgrp: 8721
[2025-07-26 23:28:31] 2025-07-27 03:27:58,702 | INFO     | corecount: 8
[2025-07-26 23:28:31] 2025-07-27 03:27:58,702 | INFO     | event service: False
[2025-07-26 23:28:31] 2025-07-27 03:27:58,702 | INFO     | sizes: {0: 2397475, 3: 2397737, 11: 2397765, 3872: 2423715, 3874: 2432769, 3876: 2432907}
[2025-07-26 23:28:31] 2025-07-27 03:27:58,702 | INFO     | --------------------------------------------------
[2025-07-26 23:28:31] 2025-07-27 03:27:58,702 | INFO     | 
[2025-07-26 23:28:31] 2025-07-27 03:27:58,703 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-26 23:28:31] 2025-07-27 03:27:58,720 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 23:28:31] 2025-07-27 03:27:58,720 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 23:28:31] 2025-07-27 03:27:58,720 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 23:28:31] 2025-07-27 03:27:58,720 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 23:28:31] 2025-07-27 03:27:58,721 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 23:28:31] 2025-07-27 03:27:58,721 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 23:28:31] 2025-07-27 03:27:58,721 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 23:28:31] 2025-07-27 03:27:58,721 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 23:28:31] 2025-07-27 03:27:58,721 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 23:28:31] 2025-07-27 03:27:58,721 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 23:28:31] 2025-07-27 03:27:58,721 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 23:28:31] 2025-07-27 03:27:58,721 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 23:28:31] 2025-07-27 03:27:58,721 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 23:28:31] 2025-07-27 03:27:58,722 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 23:28:31] 2025-07-27 03:27:58,722 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 23:28:31] 2025-07-27 03:27:58,722 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 23:28:31] 2025-07-27 03:27:58,722 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 23:28:31] 2025-07-27 03:27:58,722 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 23:28:31] 2025-07-27 03:27:58,722 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 23:28:31] 2025-07-27 03:27:58,722 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 23:28:31] 2025-07-27 03:27:58,723 | INFO     | job 6745735810 has completed (purged errors)
[2025-07-26 23:28:31] 2025-07-27 03:27:58,723 | INFO     | overall cleanup function is called
[2025-07-26 23:28:31] 2025-07-27 03:27:59,731 | INFO     | --- collectZombieJob: --- 10, [8721]
[2025-07-26 23:28:31] 2025-07-27 03:27:59,731 | INFO     | zombie collector waiting for pid 8721
[2025-07-26 23:28:31] 2025-07-27 03:27:59,731 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 23:28:31] 2025-07-27 03:27:59,731 | INFO     | collected zombie processes
[2025-07-26 23:28:31] 2025-07-27 03:27:59,731 | INFO     | will attempt to kill all subprocesses of pid=8721
[2025-07-26 23:28:31] 2025-07-27 03:27:59,826 | INFO     | process IDs to be killed: [8721] (in reverse order)
[2025-07-26 23:28:31] 2025-07-27 03:27:59,874 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 23:28:31] 2025-07-27 03:27:59,874 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 23:28:31] 2025-07-27 03:27:59,876 | INFO     | did not find any defunct processes belonging to 8721
[2025-07-26 23:28:31] 2025-07-27 03:27:59,877 | INFO     | did not find any defunct processes belonging to 8721
[2025-07-26 23:28:31] 2025-07-27 03:27:59,877 | INFO     | ready for new job
[2025-07-26 23:28:31] 2025-07-27 03:27:59,877 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 23:28:31] 2025-07-27 03:27:59,878 | INFO     | ***************************************
[2025-07-26 23:28:31] 2025-07-27 03:27:59,878 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 23:28:31] 2025-07-27 03:27:59,878 | INFO     | ***************************************
[2025-07-26 23:28:31] 2025-07-27 03:27:59,878 | INFO     | 
[2025-07-26 23:28:31] 2025-07-27 03:27:59,879 | INFO     | architecture information:
[2025-07-26 23:28:31] 2025-07-27 03:27:59,879 | INFO     | executing command: cat /etc/os-release
[2025-07-26 23:28:31] 2025-07-27 03:27:59,892 | INFO     | cat /etc/os-release:
[2025-07-26 23:28:31] NAME="CentOS Linux"
[2025-07-26 23:28:31] VERSION="7 (Core)"
[2025-07-26 23:28:31] ID="centos"
[2025-07-26 23:28:31] ID_LIKE="rhel fedora"
[2025-07-26 23:28:31] VERSION_ID="7"
[2025-07-26 23:28:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 23:28:31] ANSI_COLOR="0;31"
[2025-07-26 23:28:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 23:28:31] HOME_URL="https://www.centos.org/"
[2025-07-26 23:28:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 23:28:31] 
[2025-07-26 23:28:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 23:28:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 23:28:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 23:28:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 23:28:31] 
[2025-07-26 23:28:31] 2025-07-27 03:27:59,893 | INFO     | ***************************************
[2025-07-26 23:28:31] 2025-07-27 03:28:00,396 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-26 23:28:31] 2025-07-27 03:28:00,412 | INFO     | sufficient remaining disk space (32729202688 B)
[2025-07-26 23:28:31] 2025-07-27 03:28:00,412 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 23:28:31] 2025-07-27 03:28:00,412 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 23:28:31] 2025-07-27 03:28:00,412 | INFO     | update_server=False
[2025-07-26 23:28:31] 2025-07-27 03:28:00,412 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 23:28:31] 2025-07-27 03:28:00,413 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:28:31] 2025-07-27 03:28:00,452 | INFO     | all payload control threads have been joined
[2025-07-26 23:28:31] 2025-07-27 03:28:00,776 | INFO     | all data control threads have been joined
[2025-07-26 23:28:31] 2025-07-27 03:28:00,853 | INFO     | all job control threads have been joined
[2025-07-26 23:28:31] 2025-07-27 03:28:00,859 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:28:31] 2025-07-27 03:28:00,860 | INFO     | aborting loop
[2025-07-26 23:28:31] 2025-07-27 03:28:01,416 | INFO     | [job] retrieve thread has finished
[2025-07-26 23:28:31] 2025-07-27 03:28:01,417 | INFO     | [job] queue monitor thread has finished
[2025-07-26 23:28:31] 2025-07-27 03:28:01,432 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 23:28:31] 2025-07-27 03:28:01,457 | INFO     | [payload] control thread has finished
[2025-07-26 23:28:31] 2025-07-27 03:28:01,516 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 23:28:31] 2025-07-27 03:28:01,635 | INFO     | [payload] validate_post thread has finished
[2025-07-26 23:28:31] 2025-07-27 03:28:01,637 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 23:28:31] 2025-07-27 03:28:01,779 | INFO     | [payload] failed_post thread has finished
[2025-07-26 23:28:31] 2025-07-27 03:28:01,781 | INFO     | [data] control thread has finished
[2025-07-26 23:28:31] 2025-07-27 03:28:01,859 | INFO     | [job] control thread has finished
[2025-07-26 23:28:31] 2025-07-27 03:28:01,865 | INFO     | [job] job monitor thread has finished
[2025-07-26 23:28:31] 2025-07-27 03:28:02,303 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 23:28:31] 2025-07-27 03:28:02,341 | INFO     | [data] copytool_in thread has finished
[2025-07-26 23:28:31] 2025-07-27 03:28:02,644 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 23:28:31] 2025-07-27 03:28:02,665 | INFO     | [job] validate thread has finished
[2025-07-26 23:28:31] 2025-07-27 03:28:02,807 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 23:28:31] 2025-07-27 03:28:03,642 | INFO     | [data] copytool_out thread has finished
[2025-07-26 23:28:31] 2025-07-27 03:28:06,309 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 23:28:31] 2025-07-27 03:28:07,109 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140664518608704)>', '<ExcThread(monitor, started 140664230618880)>']
[2025-07-26 23:28:31] 2025-07-27 03:28:12,134 | INFO     | all workflow threads have been joined
[2025-07-26 23:28:31] 2025-07-27 03:28:12,134 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 23:28:31] 2025-07-27 03:28:12,135 | INFO     | traces error code: 0
[2025-07-26 23:28:31] 2025-07-27 03:28:12,135 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 23:28:31] 2025-07-27 03:28:31,590 | INFO     | PID=2191 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-26 23:28:31] 2025-07-27 03:28:31,591 | INFO     | .. there are 2 such processes running
[2025-07-26 23:28:31] 2025-07-27 03:28:31,591 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 23:28:31] 2025-07-27 03:28:31,591 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 23:28:31] 2025-07-27 03:28:31,591 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 23:28:31] 2025-07-27 03:28:31,591 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 23:28:31] 2025-07-27 03:28:31,591 | INFO     | [monitor] control thread has ended
[2025-07-26 23:28:31] 2025-07-27 03:28:31,684 [wrapper] ==== pilot stdout END ====
[2025-07-26 23:28:31] 2025-07-27 03:28:31,686 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 23:28:31] 2025-07-27 03:28:31,690 [wrapper] pilotpid: 2191
[2025-07-26 23:28:31] 2025-07-27 03:28:31,692 [wrapper] Pilot exit status: 0
[2025-07-26 23:28:31] 2025-07-27 03:28:31,702 [wrapper] pandaids: 6745735810
[2025-07-26 23:28:31] 2025-07-27 03:28:31,725 [wrapper] cleanup supervisor_pilot 20138 2192
[2025-07-26 23:28:31] 2025-07-27 03:28:31,728 [wrapper] Test setup, not cleaning
[2025-07-26 23:28:31] 2025-07-27 03:28:31,730 [wrapper] apfmon messages muted
[2025-07-26 23:28:31] 2025-07-27 03:28:31,733 [wrapper] ==== wrapper stdout END ====
[2025-07-26 23:28:31] 2025-07-27 03:28:31,735 [wrapper] ==== wrapper stderr END ====
[2025-07-26 23:28:31]  *** Error codes and diagnostics ***
[2025-07-26 23:28:31]     "exeErrorCode": 0,
[2025-07-26 23:28:31]     "exeErrorDiag": "",
[2025-07-26 23:28:31]     "pilotErrorCode": 0,
[2025-07-26 23:28:31]     "pilotErrorDiag": "",
[2025-07-26 23:28:31]  *** Listing of results directory ***
[2025-07-26 23:28:31] total 434212
[2025-07-26 23:28:31] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 17:12 pilot3.tar.gz
[2025-07-26 23:28:31] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 17:13 queuedata.json
[2025-07-26 23:28:31] -rwx------ 1 boincer umatlas     36292 Jul 26 17:16 runpilot2-wrapper.sh
[2025-07-26 23:28:31] -rw-r--r-- 1 boincer umatlas       100 Jul 26 22:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 23:28:31] -rwxr-xr-x 1 boincer umatlas      7986 Jul 26 22:23 run_atlas
[2025-07-26 23:28:31] -rw-r--r-- 1 boincer umatlas       105 Jul 26 22:23 job.xml
[2025-07-26 23:28:31] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 22:23 start_atlas.sh
[2025-07-26 23:28:31] drwxrwx--x 2 boincer umatlas      4096 Jul 26 22:23 shared
[2025-07-26 23:28:31] -rw-r--r-- 2 boincer umatlas    542892 Jul 26 22:23 input.tar.gz
[2025-07-26 23:28:31] -rw-r--r-- 2 boincer umatlas 228797797 Jul 26 22:23 EVNT.45743347._002550.pool.root.1
[2025-07-26 23:28:31] -rw-r--r-- 1 boincer umatlas         0 Jul 26 22:23 boinc_lockfile
[2025-07-26 23:28:31] -rw-r--r-- 1 boincer umatlas      2563 Jul 26 22:23 pandaJob.out
[2025-07-26 23:28:31] -rw------- 1 boincer umatlas    980117 Jul 26 22:23 agis_schedconf.cvmfs.json
[2025-07-26 23:28:31] -rw------- 1 boincer umatlas   1593052 Jul 26 22:23 agis_ddmendpoints.agis.ALL.json
[2025-07-26 23:28:31] drwx------ 4 boincer umatlas      4096 Jul 26 22:23 pilot3
[2025-07-26 23:28:31] -rw-r--r-- 1 boincer umatlas      6050 Jul 26 23:18 init_data.xml
[2025-07-26 23:28:31] -rw------- 1 boincer umatlas 210560383 Jul 26 23:27 HITS.45743349._044524.pool.root.1
[2025-07-26 23:28:31] -rw------- 1 boincer umatlas        95 Jul 26 23:27 pilot_heartbeat.json
[2025-07-26 23:28:31] -rw------- 1 boincer umatlas      1047 Jul 26 23:27 memory_monitor_summary.json
[2025-07-26 23:28:31] -rw-r--r-- 1 boincer umatlas       529 Jul 26 23:27 boinc_task_state.xml
[2025-07-26 23:28:31] -rw------- 1 boincer umatlas    304546 Jul 26 23:27 log.45743349._044524.job.log.tgz.1
[2025-07-26 23:28:31] -rw-r--r-- 1 boincer umatlas        27 Jul 26 23:27 wrapper_checkpoint.txt
[2025-07-26 23:28:31] -rw-r--r-- 1 boincer umatlas      8192 Jul 26 23:27 boinc_mmap_file
[2025-07-26 23:28:31] -rw------- 1 boincer umatlas      7842 Jul 26 23:27 heartbeat.json
[2025-07-26 23:28:31] -rw------- 1 boincer umatlas       819 Jul 26 23:28 pilotlog.txt
[2025-07-26 23:28:31] -rw------- 1 boincer umatlas    396349 Jul 26 23:28 log.45743349._044524.job.log.1
[2025-07-26 23:28:31] -rw------- 1 boincer umatlas       357 Jul 26 23:28 output.list
[2025-07-26 23:28:31] -rw-r--r-- 1 boincer umatlas       620 Jul 26 23:28 runtime_log
[2025-07-26 23:28:31] -rw------- 1 boincer umatlas    716800 Jul 26 23:28 result.tar.gz
[2025-07-26 23:28:31] -rw-r--r-- 1 boincer umatlas      8660 Jul 26 23:28 runtime_log.err
[2025-07-26 23:28:31] -rw------- 1 boincer umatlas       657 Jul 26 23:28 MRpNDmLR1z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQATLDmsHXXim.diag
[2025-07-26 23:28:31] -rw-r--r-- 1 boincer umatlas     21404 Jul 26 23:28 stderr.txt
[2025-07-26 23:28:31] HITS file was successfully produced:
[2025-07-26 23:28:31] -rw------- 1 boincer umatlas 210560383 Jul 26 23:27 shared/HITS.pool.root.1
[2025-07-26 23:28:31]  *** Contents of shared directory: ***
[2025-07-26 23:28:31] total 430320
[2025-07-26 23:28:31] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 22:23 start_atlas.sh
[2025-07-26 23:28:31] -rw-r--r-- 2 boincer umatlas    542892 Jul 26 22:23 input.tar.gz
[2025-07-26 23:28:31] -rw-r--r-- 2 boincer umatlas 228797797 Jul 26 22:23 ATLAS.root_0
[2025-07-26 23:28:31] -rw------- 1 boincer umatlas 210560383 Jul 26 23:27 HITS.pool.root.1
[2025-07-26 23:28:31] -rw------- 1 boincer umatlas    716800 Jul 26 23:28 result.tar.gz
23:28:33 (30997): run_atlas exited; CPU time 28319.947816
23:28:33 (30997): called boinc_finish(0)

</stderr_txt>
]]>

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