Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:23:16 (1414333): wrapper (7.7.26015): starting
22:23:16 (1414333): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 22:23:16] Arguments: --nthreads 8
[2025-07-26 22:23:16] Threads: 8
[2025-07-26 22:23:16] Checking for CVMFS
[2025-07-26 22:23:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 22:23:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 22:23:17] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 22:23:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 22:23:17] 2.12.6.0 126724 13557 360596 148797 2 68 25080434 32935936 21896 16776704 2 43666606 99.661 70908906 11541 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 22:23:17] CVMFS is ok
[2025-07-26 22:23:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 22:23:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 22:23:17] Further information can be found at the LHC@home message board.
[2025-07-26 22:23:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 22:23:17] Checking for apptainer binary...
[2025-07-26 22:23:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 22:23:17] Running /usr/bin/apptainer --version
[2025-07-26 22:23:17] apptainer version 1.4.1-1.el9
[2025-07-26 22:23:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 22:23:17] c6-12-27-3.aglt2.org
[2025-07-26 22:23:17] apptainer works
[2025-07-26 22:23:17] Set ATHENA_PROC_NUMBER=8
[2025-07-26 22:23:17] Set ATHENA_CORE_NUMBER=8
[2025-07-26 22:23:17] Starting ATLAS job with PandaID=6745354634
[2025-07-26 22:23:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 00:14:34]  *** The last 200 lines of the pilot log: ***
[2025-07-27 00:14:34] 2025-07-27 04:13:58,287 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 00:14:34] 2025-07-27 04:14:00,456 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 00:14:34] 2025-07-27 04:14:00,468 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2680.6350312499994
[2025-07-27 00:14:34] 2025-07-27 04:14:00,485 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6745354634/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 00:14:34] 2025-07-27 04:14:00,485 | INFO     | extracted standard info from prmon json
[2025-07-27 00:14:34] 2025-07-27 04:14:00,486 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 00:14:34] 2025-07-27 04:14:00,486 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 00:14:34] 2025-07-27 04:14:00,486 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 00:14:34] 2025-07-27 04:14:00,486 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 00:14:34] 2025-07-27 04:14:00,489 | INFO     | fitting pss+swap vs Time
[2025-07-27 00:14:34] 2025-07-27 04:14:00,489 | INFO     | sum of square deviations: 390582207.0
[2025-07-27 00:14:34] 2025-07-27 04:14:00,489 | INFO     | sum of deviations: 4524853852.0
[2025-07-27 00:14:34] 2025-07-27 04:14:00,490 | INFO     | mean x: 1753586308.5
[2025-07-27 00:14:34] 2025-07-27 04:14:00,490 | INFO     | mean y: 2217231.925925926
[2025-07-27 00:14:34] 2025-07-27 04:14:00,490 | INFO     | -- intersect: -20312896003.200745
[2025-07-27 00:14:34] 2025-07-27 04:14:00,490 | INFO     | intersect: -20312896003.200745
[2025-07-27 00:14:34] 2025-07-27 04:14:00,490 | INFO     | chi2: 1.558376986744105
[2025-07-27 00:14:34] 2025-07-27 04:14:00,490 | INFO     | sum of square deviations: 338804492.0
[2025-07-27 00:14:34] 2025-07-27 04:14:00,491 | INFO     | sum of deviations: 5186961089.0
[2025-07-27 00:14:34] 2025-07-27 04:14:00,491 | INFO     | mean x: 1753586156.0
[2025-07-27 00:14:34] 2025-07-27 04:14:00,491 | INFO     | mean y: 2219168.6893203883
[2025-07-27 00:14:34] 2025-07-27 04:14:00,491 | INFO     | -- intersect: -26844482608.16045
[2025-07-27 00:14:34] 2025-07-27 04:14:00,491 | INFO     | intersect: -26844482608.16045
[2025-07-27 00:14:34] 2025-07-27 04:14:00,491 | INFO     | chi2: 1.5600181681595169
[2025-07-27 00:14:34] 2025-07-27 04:14:00,491 | INFO     | current chi2=1.5600181681595169 (change=-0.10531350432995706 %)
[2025-07-27 00:14:34] 2025-07-27 04:14:00,491 | INFO     | right removable region: 102
[2025-07-27 00:14:34] 2025-07-27 04:14:00,492 | INFO     | sum of square deviations: 338804492.0
[2025-07-27 00:14:34] 2025-07-27 04:14:00,492 | INFO     | sum of deviations: -10351356570.0
[2025-07-27 00:14:34] 2025-07-27 04:14:00,492 | INFO     | mean x: 1753586461.0
[2025-07-27 00:14:34] 2025-07-27 04:14:00,492 | INFO     | mean y: 2260247.980582524
[2025-07-27 00:14:34] 2025-07-27 04:14:00,492 | INFO     | -- intersect: 53578877922.032555
[2025-07-27 00:14:34] 2025-07-27 04:14:00,492 | INFO     | intersect: 53578877922.032555
[2025-07-27 00:14:34] 2025-07-27 04:14:00,493 | INFO     | chi2: 0.09860333229323834
[2025-07-27 00:14:34] 2025-07-27 04:14:00,493 | INFO     | current chi2=0.09860333229323834 (change=93.67269068190947 %)
[2025-07-27 00:14:34] 2025-07-27 04:14:00,493 | INFO     | sum of square deviations: 291817564.5
[2025-07-27 00:14:34] 2025-07-27 04:14:00,493 | INFO     | sum of deviations: -8897248086.000002
[2025-07-27 00:14:34] 2025-07-27 04:14:00,493 | INFO     | mean x: 1753586613.5
[2025-07-27 00:14:34] 2025-07-27 04:14:00,494 | INFO     | mean y: 2255526.551020408
[2025-07-27 00:14:34] 2025-07-27 04:14:00,494 | INFO     | -- intersect: 53467492162.77173
[2025-07-27 00:14:34] 2025-07-27 04:14:00,494 | INFO     | intersect: 53467492162.77173
[2025-07-27 00:14:34] 2025-07-27 04:14:00,494 | INFO     | chi2: 0.08007513418896803
[2025-07-27 00:14:34] 2025-07-27 04:14:00,494 | INFO     | current chi2=0.08007513418896803 (change=18.790640917863655 %)
[2025-07-27 00:14:34] 2025-07-27 04:14:00,494 | INFO     | left removable region: 20
[2025-07-27 00:14:34] 2025-07-27 04:14:00,494 | INFO     | sum of square deviations: 170944600.5
[2025-07-27 00:14:34] 2025-07-27 04:14:00,495 | INFO     | sum of deviations: -6874435961.5
[2025-07-27 00:14:34] 2025-07-27 04:14:00,495 | INFO     | mean x: 1753586735.5
[2025-07-27 00:14:34] 2025-07-27 04:14:00,495 | INFO     | mean y: 2256414.5
[2025-07-27 00:14:34] 2025-07-27 04:14:00,495 | INFO     | -- intersect: 70521709388.56798
[2025-07-27 00:14:34] 2025-07-27 04:14:00,495 | INFO     | intersect: 70521709388.56798
[2025-07-27 00:14:34] 2025-07-27 04:14:00,495 | INFO     | chi2: 0.062423675565059566
[2025-07-27 00:14:34] 2025-07-27 04:14:00,495 | INFO     | -- intersect: 70521709388.56798
[2025-07-27 00:14:34] 2025-07-27 04:14:00,495 | INFO     | current memory leak: -40.21 B/s (using 82 data points, chi2=0.06)
[2025-07-27 00:14:34] 2025-07-27 04:14:00,496 | INFO     | could have reported an average CPU frequency of 2653 MHz (7 samples)
[2025-07-27 00:14:34] 2025-07-27 04:14:00,496 | INFO     | ..............................
[2025-07-27 00:14:34] 2025-07-27 04:14:00,496 | INFO     | . Timing measurements:
[2025-07-27 00:14:34] 2025-07-27 04:14:00,496 | INFO     | . get job = 0 s
[2025-07-27 00:14:34] 2025-07-27 04:14:00,496 | INFO     | . initial setup = 2 s
[2025-07-27 00:14:34] 2025-07-27 04:14:00,496 | INFO     | . payload setup = 9 s
[2025-07-27 00:14:34] 2025-07-27 04:14:00,496 | INFO     | . stage-in = 0 s
[2025-07-27 00:14:34] 2025-07-27 04:14:00,497 | INFO     | . payload execution = 6584 s
[2025-07-27 00:14:34] 2025-07-27 04:14:00,497 | INFO     | . stage-out = 0 s
[2025-07-27 00:14:34] 2025-07-27 04:14:00,497 | INFO     | . log creation = 0 s
[2025-07-27 00:14:34] 2025-07-27 04:14:00,497 | INFO     | ..............................
[2025-07-27 00:14:34] 2025-07-27 04:14:00,605 | INFO     | 
[2025-07-27 00:14:34] 2025-07-27 04:14:00,606 | INFO     | job summary report
[2025-07-27 00:14:34] 2025-07-27 04:14:00,607 | INFO     | --------------------------------------------------
[2025-07-27 00:14:34] 2025-07-27 04:14:00,607 | INFO     | PanDA job id: 6745354634
[2025-07-27 00:14:34] 2025-07-27 04:14:00,607 | INFO     | task id: 45743349
[2025-07-27 00:14:34] 2025-07-27 04:14:00,607 | INFO     | errors: (none)
[2025-07-27 00:14:34] 2025-07-27 04:14:00,607 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 00:14:34] 2025-07-27 04:14:00,607 | INFO     | pilot state: finished 
[2025-07-27 00:14:34] 2025-07-27 04:14:00,607 | INFO     | transexitcode: 0
[2025-07-27 00:14:34] 2025-07-27 04:14:00,607 | INFO     | exeerrorcode: 0
[2025-07-27 00:14:34] 2025-07-27 04:14:00,608 | INFO     | exeerrordiag: 
[2025-07-27 00:14:34] 2025-07-27 04:14:00,608 | INFO     | exitcode: 0
[2025-07-27 00:14:34] 2025-07-27 04:14:00,608 | INFO     | exitmsg: OK
[2025-07-27 00:14:34] 2025-07-27 04:14:00,608 | INFO     | cpuconsumptiontime: 49342 s
[2025-07-27 00:14:34] 2025-07-27 04:14:00,608 | INFO     | nevents: 400
[2025-07-27 00:14:34] 2025-07-27 04:14:00,608 | INFO     | neventsw: 0
[2025-07-27 00:14:34] 2025-07-27 04:14:00,608 | INFO     | pid: 1425825
[2025-07-27 00:14:34] 2025-07-27 04:14:00,608 | INFO     | pgrp: 1425825
[2025-07-27 00:14:34] 2025-07-27 04:14:00,608 | INFO     | corecount: 8
[2025-07-27 00:14:34] 2025-07-27 04:14:00,608 | INFO     | event service: False
[2025-07-27 00:14:34] 2025-07-27 04:14:00,608 | INFO     | sizes: {0: 2397304, 1: 2397503, 7: 2397765, 12: 2397793, 6598: 2424736, 6600: 2433762, 6604: 2433946, 6611: 2434140}
[2025-07-27 00:14:34] 2025-07-27 04:14:00,609 | INFO     | --------------------------------------------------
[2025-07-27 00:14:34] 2025-07-27 04:14:00,609 | INFO     | 
[2025-07-27 00:14:34] 2025-07-27 04:14:00,609 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-27 00:14:34] 2025-07-27 04:14:00,636 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 00:14:34] 2025-07-27 04:14:00,637 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 00:14:34] 2025-07-27 04:14:00,637 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 00:14:34] 2025-07-27 04:14:00,637 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 00:14:34] 2025-07-27 04:14:00,637 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 00:14:34] 2025-07-27 04:14:00,637 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 00:14:34] 2025-07-27 04:14:00,637 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 00:14:34] 2025-07-27 04:14:00,637 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 00:14:34] 2025-07-27 04:14:00,637 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 00:14:34] 2025-07-27 04:14:00,637 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 00:14:34] 2025-07-27 04:14:00,637 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 00:14:34] 2025-07-27 04:14:00,637 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 00:14:34] 2025-07-27 04:14:00,637 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 00:14:34] 2025-07-27 04:14:00,637 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 00:14:34] 2025-07-27 04:14:00,637 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 00:14:34] 2025-07-27 04:14:00,637 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 00:14:34] 2025-07-27 04:14:00,638 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 00:14:34] 2025-07-27 04:14:00,638 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 00:14:34] 2025-07-27 04:14:00,638 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 00:14:34] 2025-07-27 04:14:00,638 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 00:14:34] 2025-07-27 04:14:00,638 | INFO     | job 6745354634 has completed (purged errors)
[2025-07-27 00:14:34] 2025-07-27 04:14:00,638 | INFO     | overall cleanup function is called
[2025-07-27 00:14:34] 2025-07-27 04:14:01,646 | INFO     | --- collectZombieJob: --- 10, [1425825]
[2025-07-27 00:14:34] 2025-07-27 04:14:01,647 | INFO     | zombie collector waiting for pid 1425825
[2025-07-27 00:14:34] 2025-07-27 04:14:01,647 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 00:14:34] 2025-07-27 04:14:01,647 | INFO     | collected zombie processes
[2025-07-27 00:14:34] 2025-07-27 04:14:01,647 | INFO     | will attempt to kill all subprocesses of pid=1425825
[2025-07-27 00:14:34] 2025-07-27 04:14:02,114 | INFO     | process IDs to be killed: [1425825] (in reverse order)
[2025-07-27 00:14:34] 2025-07-27 04:14:02,245 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 00:14:34] 2025-07-27 04:14:02,245 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 00:14:34] 2025-07-27 04:14:02,264 | INFO     | did not find any defunct processes belonging to 1425825
[2025-07-27 00:14:34] 2025-07-27 04:14:02,283 | INFO     | did not find any defunct processes belonging to 1425825
[2025-07-27 00:14:34] 2025-07-27 04:14:02,284 | INFO     | ready for new job
[2025-07-27 00:14:34] 2025-07-27 04:14:02,284 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 00:14:34] 2025-07-27 04:14:02,287 | INFO     | ***************************************
[2025-07-27 00:14:34] 2025-07-27 04:14:02,287 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 00:14:34] 2025-07-27 04:14:02,287 | INFO     | ***************************************
[2025-07-27 00:14:34] 2025-07-27 04:14:02,287 | INFO     | 
[2025-07-27 00:14:34] 2025-07-27 04:14:02,305 | INFO     | architecture information:
[2025-07-27 00:14:34] 2025-07-27 04:14:02,306 | INFO     | executing command: cat /etc/os-release
[2025-07-27 00:14:34] 2025-07-27 04:14:02,332 | INFO     | cat /etc/os-release:
[2025-07-27 00:14:34] NAME="CentOS Linux"
[2025-07-27 00:14:34] VERSION="7 (Core)"
[2025-07-27 00:14:34] ID="centos"
[2025-07-27 00:14:34] ID_LIKE="rhel fedora"
[2025-07-27 00:14:34] VERSION_ID="7"
[2025-07-27 00:14:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 00:14:34] ANSI_COLOR="0;31"
[2025-07-27 00:14:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 00:14:34] HOME_URL="https://www.centos.org/"
[2025-07-27 00:14:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 00:14:34] 
[2025-07-27 00:14:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 00:14:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 00:14:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 00:14:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 00:14:34] 
[2025-07-27 00:14:34] 2025-07-27 04:14:02,332 | INFO     | ***************************************
[2025-07-27 00:14:34] 2025-07-27 04:14:02,836 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-27 00:14:34] 2025-07-27 04:14:02,859 | INFO     | sufficient remaining disk space (95739183104 B)
[2025-07-27 00:14:34] 2025-07-27 04:14:02,860 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 00:14:34] 2025-07-27 04:14:02,860 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 00:14:34] 2025-07-27 04:14:02,860 | INFO     | update_server=False
[2025-07-27 00:14:34] 2025-07-27 04:14:02,860 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 00:14:34] 2025-07-27 04:14:02,861 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 00:14:34] 2025-07-27 04:14:03,138 | INFO     | all data control threads have been joined
[2025-07-27 00:14:34] 2025-07-27 04:14:03,138 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 00:14:34] 2025-07-27 04:14:03,298 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 00:14:34] 2025-07-27 04:14:03,299 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 00:14:34] 2025-07-27 04:14:03,299 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 00:14:34] 2025-07-27 04:14:03,299 | INFO     | will abort loop
[2025-07-27 00:14:34] 2025-07-27 04:14:03,866 | INFO     | [job] retrieve thread has finished
[2025-07-27 00:14:34] 2025-07-27 04:14:03,975 | INFO     | all payload control threads have been joined
[2025-07-27 00:14:34] 2025-07-27 04:14:04,143 | INFO     | [data] control thread has finished
[2025-07-27 00:14:34] 2025-07-27 04:14:04,250 | INFO     | all job control threads have been joined
[2025-07-27 00:14:34] 2025-07-27 04:14:04,304 | INFO     | [job] job monitor thread has finished
[2025-07-27 00:14:34] 2025-07-27 04:14:04,366 | INFO     | [payload] validate_post thread has finished
[2025-07-27 00:14:34] 2025-07-27 04:14:04,506 | INFO     | [job] validate thread has finished
[2025-07-27 00:14:34] 2025-07-27 04:14:04,535 | INFO     | [payload] failed_post thread has finished
[2025-07-27 00:14:34] 2025-07-27 04:14:04,581 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 00:14:34] 2025-07-27 04:14:04,735 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 00:14:34] 2025-07-27 04:14:04,861 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 00:14:34] 2025-07-27 04:14:04,870 | INFO     | [data] copytool_out thread has finished
[2025-07-27 00:14:34] 2025-07-27 04:14:04,980 | INFO     | [payload] control thread has finished
[2025-07-27 00:14:34] 2025-07-27 04:14:05,093 | INFO     | [data] copytool_in thread has finished
[2025-07-27 00:14:34] 2025-07-27 04:14:05,255 | INFO     | [job] control thread has finished
[2025-07-27 00:14:34] 2025-07-27 04:14:05,614 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 00:14:34] 2025-07-27 04:14:06,620 | INFO     | [job] queue monitor thread has finished
[2025-07-27 00:14:34] 2025-07-27 04:14:07,145 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 00:14:34] 2025-07-27 04:14:13,097 | INFO     | job.realtimelogging is not enabled
[2025-07-27 00:14:34] 2025-07-27 04:14:14,102 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 00:14:34] 2025-07-27 04:14:16,036 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140424410470208)>', '<ExcThread(monitor, started 140423544694528)>']
[2025-07-27 00:14:34] 2025-07-27 04:14:21,061 | INFO     | all workflow threads have been joined
[2025-07-27 00:14:34] 2025-07-27 04:14:21,061 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 00:14:34] 2025-07-27 04:14:21,062 | INFO     | traces error code: 0
[2025-07-27 00:14:34] 2025-07-27 04:14:21,062 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 00:14:34] 2025-07-27 04:14:34,029 | INFO     | PID=1419063 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 00:14:34] 2025-07-27 04:14:34,030 | INFO     | .. there are 26 such processes running
[2025-07-27 00:14:34] 2025-07-27 04:14:34,030 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 00:14:34] 2025-07-27 04:14:34,031 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 00:14:34] 2025-07-27 04:14:34,031 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 00:14:34] 2025-07-27 04:14:34,031 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 00:14:34] 2025-07-27 04:14:34,031 | INFO     | [monitor] control thread has ended
[2025-07-27 00:14:34] 2025-07-27 04:14:34,286 [wrapper] ==== pilot stdout END ====
[2025-07-27 00:14:34] 2025-07-27 04:14:34,290 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 00:14:34] 2025-07-27 04:14:34,294 [wrapper] pilotpid: 1419063
[2025-07-27 00:14:34] 2025-07-27 04:14:34,297 [wrapper] Pilot exit status: 0
[2025-07-27 00:14:34] 2025-07-27 04:14:34,312 [wrapper] pandaids: 6745354634
[2025-07-27 00:14:34] 2025-07-27 04:14:34,424 [wrapper] cleanup supervisor_pilot 2059920 1419064
[2025-07-27 00:14:34] 2025-07-27 04:14:34,429 [wrapper] Test setup, not cleaning
[2025-07-27 00:14:34] 2025-07-27 04:14:34,432 [wrapper] apfmon messages muted
[2025-07-27 00:14:34] 2025-07-27 04:14:34,434 [wrapper] ==== wrapper stdout END ====
[2025-07-27 00:14:34] 2025-07-27 04:14:34,437 [wrapper] ==== wrapper stderr END ====
[2025-07-27 00:14:34]  *** Error codes and diagnostics ***
[2025-07-27 00:14:34]     "exeErrorCode": 0,
[2025-07-27 00:14:34]     "exeErrorDiag": "",
[2025-07-27 00:14:34]     "pilotErrorCode": 0,
[2025-07-27 00:14:34]     "pilotErrorDiag": "",
[2025-07-27 00:14:34]  *** Listing of results directory ***
[2025-07-27 00:14:34] total 354636
[2025-07-27 00:14:34] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 14:40 pilot3.tar.gz
[2025-07-27 00:14:34] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 15:01 queuedata.json
[2025-07-27 00:14:34] -rwx------. 1 boincer umatlas     36292 Jul 26 15:03 runpilot2-wrapper.sh
[2025-07-27 00:14:34] -rw-r--r--. 1 boincer umatlas       100 Jul 26 22:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 00:14:34] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 22:23 run_atlas
[2025-07-27 00:14:34] -rw-r--r--. 1 boincer umatlas       105 Jul 26 22:23 job.xml
[2025-07-27 00:14:34] -rw-r--r--. 2 boincer umatlas 151395579 Jul 26 22:23 EVNT.45743347._002418.pool.root.1
[2025-07-27 00:14:34] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 22:23 start_atlas.sh
[2025-07-27 00:14:34] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 22:23 shared
[2025-07-27 00:14:34] -rw-r--r--. 2 boincer umatlas    542899 Jul 26 22:23 input.tar.gz
[2025-07-27 00:14:34] -rw-r--r--. 1 boincer umatlas         0 Jul 26 22:23 boinc_lockfile
[2025-07-27 00:14:34] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 22:23 pandaJob.out
[2025-07-27 00:14:34] -rw-------. 1 boincer umatlas    980117 Jul 26 22:23 agis_schedconf.cvmfs.json
[2025-07-27 00:14:34] -rw-------. 1 boincer umatlas   1593052 Jul 26 22:23 agis_ddmendpoints.agis.ALL.json
[2025-07-27 00:14:34] drwx------. 4 boincer umatlas      4096 Jul 26 22:23 pilot3
[2025-07-27 00:14:34] -rw-r--r--. 1 boincer umatlas      6856 Jul 27 00:12 init_data.xml
[2025-07-27 00:14:34] -rw-------. 1 boincer umatlas 205969207 Jul 27 00:13 HITS.45743349._042808.pool.root.1
[2025-07-27 00:14:34] -rw-r--r--. 1 boincer umatlas       529 Jul 27 00:13 boinc_task_state.xml
[2025-07-27 00:14:34] -rw-------. 1 boincer umatlas      1042 Jul 27 00:13 memory_monitor_summary.json
[2025-07-27 00:14:34] -rw-------. 1 boincer umatlas    322519 Jul 27 00:13 log.45743349._042808.job.log.tgz.1
[2025-07-27 00:14:34] -rw-------. 1 boincer umatlas      7826 Jul 27 00:14 heartbeat.json
[2025-07-27 00:14:34] -rw-------. 1 boincer umatlas        95 Jul 27 00:14 pilot_heartbeat.json
[2025-07-27 00:14:34] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 00:14 boinc_mmap_file
[2025-07-27 00:14:34] -rw-r--r--. 1 boincer umatlas        27 Jul 27 00:14 wrapper_checkpoint.txt
[2025-07-27 00:14:34] -rw-------. 1 boincer umatlas       823 Jul 27 00:14 pilotlog.txt
[2025-07-27 00:14:34] -rw-------. 1 boincer umatlas    626945 Jul 27 00:14 log.45743349._042808.job.log.1
[2025-07-27 00:14:34] -rw-------. 1 boincer umatlas       357 Jul 27 00:14 output.list
[2025-07-27 00:14:34] -rw-r--r--. 1 boincer umatlas       620 Jul 27 00:14 runtime_log
[2025-07-27 00:14:34] -rw-------. 1 boincer umatlas    972800 Jul 27 00:14 result.tar.gz
[2025-07-27 00:14:34] -rw-r--r--. 1 boincer umatlas      8670 Jul 27 00:14 runtime_log.err
[2025-07-27 00:14:34] -rw-------. 1 boincer umatlas       654 Jul 27 00:14 LVWKDmBMzz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmUH1KDmIDPHMn.diag
[2025-07-27 00:14:34] -rw-r--r--. 1 boincer umatlas     21111 Jul 27 00:14 stderr.txt
[2025-07-27 00:14:34] HITS file was successfully produced:
[2025-07-27 00:14:34] -rw-------. 1 boincer umatlas 205969207 Jul 27 00:13 shared/HITS.pool.root.1
[2025-07-27 00:14:34]  *** Contents of shared directory: ***
[2025-07-27 00:14:34] total 350500
[2025-07-27 00:14:34] -rw-r--r--. 2 boincer umatlas 151395579 Jul 26 22:23 ATLAS.root_0
[2025-07-27 00:14:34] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 22:23 start_atlas.sh
[2025-07-27 00:14:34] -rw-r--r--. 2 boincer umatlas    542899 Jul 26 22:23 input.tar.gz
[2025-07-27 00:14:34] -rw-------. 1 boincer umatlas 205969207 Jul 27 00:13 HITS.pool.root.1
[2025-07-27 00:14:34] -rw-------. 1 boincer umatlas    972800 Jul 27 00:14 result.tar.gz
00:14:36 (1414333): run_atlas exited; CPU time 49666.462135
00:14:36 (1414333): called boinc_finish(0)

</stderr_txt>
]]>

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