Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:19:43 (191750): wrapper (7.7.26015): starting
22:19:43 (191750): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 22:19:43] Arguments: --nthreads 8
[2025-07-26 22:19:43] Threads: 8
[2025-07-26 22:19:43] Checking for CVMFS
[2025-07-26 22:19:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 22:19:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 22:19:43] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 22:19:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 22:19:43] 2.13.1.0 2445429 3724 93184 148797 3 188 34731656 40960000 13696 16776704 0 59657130 99.999 133303 60345 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 22:19:43] CVMFS is ok
[2025-07-26 22:19:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 22:19:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 22:19:43] Further information can be found at the LHC@home message board.
[2025-07-26 22:19:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 22:19:43] Checking for apptainer binary...
[2025-07-26 22:19:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 22:19:43] Running /usr/bin/apptainer --version
[2025-07-26 22:19:43] apptainer version 1.4.1-1.el9
[2025-07-26 22:19:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 22:19:44] c-208-40.aglt2.org
[2025-07-26 22:19:44] apptainer works
[2025-07-26 22:19:44] Set ATHENA_PROC_NUMBER=8
[2025-07-26 22:19:44] Set ATHENA_CORE_NUMBER=8
[2025-07-26 22:19:44] Starting ATLAS job with PandaID=6745736014
[2025-07-26 22:19:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 23:13:41]  *** The last 200 lines of the pilot log: ***
[2025-07-26 23:13:41]  is_altstaged=None
[2025-07-26 23:13:41]  is_tar=False
[2025-07-26 23:13:41]  lfn=log.45743349._044609.job.log.tgz.1
[2025-07-26 23:13:41]  mtime=0
[2025-07-26 23:13:41]  protocol_id=None
[2025-07-26 23:13:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 23:13:41]  replicas=None
[2025-07-26 23:13:41]  scope=mc23_13p6TeV
[2025-07-26 23:13:41]  status=None
[2025-07-26 23:13:41]  status_code=0
[2025-07-26 23:13:41]  storage_token=
[2025-07-26 23:13:41]  surl=/tmp/boinchome/slots/15/PanDA_Pilot-6745736014/log.45743349._044609.job.log.tgz.1
[2025-07-26 23:13:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4a/da/log.45743349._044609.job.log.tgz.1
[2025-07-26 23:13:41]  workdir=None
[2025-07-26 23:13:41] ]
[2025-07-26 23:13:41] 2025-07-27 03:13:04,484 | INFO     | transferring file log.45743349._044609.job.log.tgz.1 from /tmp/boinchome/slots/15/PanDA_Pilot-6745736014/log.45743349._044609.job.log.tgz.1 to /tmp/boinchome/slots
[2025-07-26 23:13:41] 2025-07-27 03:13:04,485 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/15/PanDA_Pilot-6745736014/log.45743349._044609.job.log.tgz.1 /tmp/boinchome/slots/15/log.45743349._044609.j
[2025-07-26 23:13:41] 2025-07-27 03:13:04,504 | INFO     | adding to output.list: log.45743349._044609.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4a/da/log.45743349._044609.job.log.tg
[2025-07-26 23:13:41] 2025-07-27 03:13:04,505 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 23:13:41] 2025-07-27 03:13:04,505 | INFO     | summary of transferred files:
[2025-07-26 23:13:41] 2025-07-27 03:13:04,505 | INFO     |  -- lfn=log.45743349._044609.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 23:13:41] 2025-07-27 03:13:04,505 | INFO     | stage-out finished correctly
[2025-07-26 23:13:41] 2025-07-27 03:13:04,729 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 23:13:41] 2025-07-27 03:13:05,090 | INFO     | job 6745736014 has state=finished
[2025-07-26 23:13:41] 2025-07-27 03:13:05,090 | INFO     | preparing for final server update for job 6745736014 in state='finished'
[2025-07-26 23:13:41] 2025-07-27 03:13:05,091 | INFO     | this job has now completed (state=finished)
[2025-07-26 23:13:41] 2025-07-27 03:13:05,091 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 23:13:41] 2025-07-27 03:13:05,091 | INFO     | log transfer has been attempted: DONE
[2025-07-26 23:13:41] 2025-07-27 03:13:05,091 | INFO     | job 6745736014 has finished - writing final server update
[2025-07-26 23:13:41] 2025-07-27 03:13:05,091 | INFO     | total number of processed events: 400 (read)
[2025-07-26 23:13:41] 2025-07-27 03:13:05,091 | INFO     | executing command: lscpu
[2025-07-26 23:13:41] 2025-07-27 03:13:05,145 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 23:13:41] 2025-07-27 03:13:05,244 | INFO     | monitor loop #233: job 0:6745736014 is in state 'finished'
[2025-07-26 23:13:41] 2025-07-27 03:13:05,244 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 23:13:41] 2025-07-27 03:13:07,748 | INFO     | monitor loop #234: job 0:6745736014 is in state 'finished'
[2025-07-26 23:13:41] 2025-07-27 03:13:07,748 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 23:13:41] 2025-07-27 03:13:09,048 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 23:13:41] 2025-07-27 03:13:09,053 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3786.9325156250015
[2025-07-26 23:13:41] 2025-07-27 03:13:09,066 | INFO     | using path: /tmp/boinchome/slots/15/PanDA_Pilot-6745736014/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 23:13:41] 2025-07-27 03:13:09,066 | INFO     | extracted standard info from prmon json
[2025-07-26 23:13:41] 2025-07-27 03:13:09,066 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 23:13:41] 2025-07-27 03:13:09,066 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 23:13:41] 2025-07-27 03:13:09,066 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 23:13:41] 2025-07-27 03:13:09,066 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 23:13:41] 2025-07-27 03:13:09,067 | INFO     | fitting pss+swap vs Time
[2025-07-26 23:13:41] 2025-07-27 03:13:09,067 | INFO     | sum of square deviations: 28242390.0
[2025-07-26 23:13:41] 2025-07-27 03:13:09,067 | INFO     | sum of deviations: -601920550.0
[2025-07-26 23:13:41] 2025-07-27 03:13:09,068 | INFO     | mean x: 1753584465.0
[2025-07-26 23:13:41] 2025-07-27 03:13:09,068 | INFO     | mean y: 2561963.4444444445
[2025-07-26 23:13:41] 2025-07-27 03:13:09,068 | INFO     | -- intersect: 37376117305.05171
[2025-07-26 23:13:41] 2025-07-27 03:13:09,068 | INFO     | intersect: 37376117305.05171
[2025-07-26 23:13:41] 2025-07-27 03:13:09,068 | INFO     | chi2: 0.0009950630213877315
[2025-07-26 23:13:41] 2025-07-27 03:13:09,068 | INFO     | -- intersect: 37376117305.05171
[2025-07-26 23:13:41] 2025-07-27 03:13:09,068 | INFO     | current memory leak: -21.31 B/s (using 45 data points, chi2=0.00)
[2025-07-26 23:13:41] 2025-07-27 03:13:09,068 | INFO     | could have reported an average CPU frequency of 3789 MHz (5 samples)
[2025-07-26 23:13:41] 2025-07-27 03:13:09,068 | INFO     | ..............................
[2025-07-26 23:13:41] 2025-07-27 03:13:09,068 | INFO     | . Timing measurements:
[2025-07-26 23:13:41] 2025-07-27 03:13:09,068 | INFO     | . get job = 0 s
[2025-07-26 23:13:41] 2025-07-27 03:13:09,068 | INFO     | . initial setup = 2 s
[2025-07-26 23:13:41] 2025-07-27 03:13:09,068 | INFO     | . payload setup = 5 s
[2025-07-26 23:13:41] 2025-07-27 03:13:09,068 | INFO     | . stage-in = 0 s
[2025-07-26 23:13:41] 2025-07-27 03:13:09,068 | INFO     | . payload execution = 3165 s
[2025-07-26 23:13:41] 2025-07-27 03:13:09,068 | INFO     | . stage-out = 0 s
[2025-07-26 23:13:41] 2025-07-27 03:13:09,068 | INFO     | . log creation = 0 s
[2025-07-26 23:13:41] 2025-07-27 03:13:09,069 | INFO     | ..............................
[2025-07-26 23:13:41] 2025-07-27 03:13:09,125 | INFO     | 
[2025-07-26 23:13:41] 2025-07-27 03:13:09,125 | INFO     | job summary report
[2025-07-26 23:13:41] 2025-07-27 03:13:09,125 | INFO     | --------------------------------------------------
[2025-07-26 23:13:41] 2025-07-27 03:13:09,126 | INFO     | PanDA job id: 6745736014
[2025-07-26 23:13:41] 2025-07-27 03:13:09,126 | INFO     | task id: 45743349
[2025-07-26 23:13:41] 2025-07-27 03:13:09,126 | INFO     | errors: (none)
[2025-07-26 23:13:41] 2025-07-27 03:13:09,126 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 23:13:41] 2025-07-27 03:13:09,126 | INFO     | pilot state: finished 
[2025-07-26 23:13:41] 2025-07-27 03:13:09,126 | INFO     | transexitcode: 0
[2025-07-26 23:13:41] 2025-07-27 03:13:09,126 | INFO     | exeerrorcode: 0
[2025-07-26 23:13:41] 2025-07-27 03:13:09,126 | INFO     | exeerrordiag: 
[2025-07-26 23:13:41] 2025-07-27 03:13:09,126 | INFO     | exitcode: 0
[2025-07-26 23:13:41] 2025-07-27 03:13:09,126 | INFO     | exitmsg: OK
[2025-07-26 23:13:41] 2025-07-27 03:13:09,126 | INFO     | cpuconsumptiontime: 23389 s
[2025-07-26 23:13:41] 2025-07-27 03:13:09,126 | INFO     | nevents: 400
[2025-07-26 23:13:41] 2025-07-27 03:13:09,126 | INFO     | neventsw: 0
[2025-07-26 23:13:41] 2025-07-27 03:13:09,126 | INFO     | pid: 202163
[2025-07-26 23:13:41] 2025-07-27 03:13:09,126 | INFO     | pgrp: 202163
[2025-07-26 23:13:41] 2025-07-27 03:13:09,126 | INFO     | corecount: 8
[2025-07-26 23:13:41] 2025-07-27 03:13:09,126 | INFO     | event service: False
[2025-07-26 23:13:41] 2025-07-27 03:13:09,126 | INFO     | sizes: {0: 2397470, 4: 2397732, 11: 2397760, 3175: 2423257, 3177: 2432313, 3181: 2432483}
[2025-07-26 23:13:41] 2025-07-27 03:13:09,126 | INFO     | --------------------------------------------------
[2025-07-26 23:13:41] 2025-07-27 03:13:09,126 | INFO     | 
[2025-07-26 23:13:41] 2025-07-27 03:13:09,126 | INFO     | executing command: ls -lF /tmp/boinchome/slots/15
[2025-07-26 23:13:41] 2025-07-27 03:13:09,146 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 23:13:41] 2025-07-27 03:13:09,146 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 23:13:41] 2025-07-27 03:13:09,146 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 23:13:41] 2025-07-27 03:13:09,146 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 23:13:41] 2025-07-27 03:13:09,146 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 23:13:41] 2025-07-27 03:13:09,146 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 23:13:41] 2025-07-27 03:13:09,146 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 23:13:41] 2025-07-27 03:13:09,146 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 23:13:41] 2025-07-27 03:13:09,146 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 23:13:41] 2025-07-27 03:13:09,147 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 23:13:41] 2025-07-27 03:13:09,147 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 23:13:41] 2025-07-27 03:13:09,147 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 23:13:41] 2025-07-27 03:13:09,147 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 23:13:41] 2025-07-27 03:13:09,147 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 23:13:41] 2025-07-27 03:13:09,147 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 23:13:41] 2025-07-27 03:13:09,147 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 23:13:41] 2025-07-27 03:13:09,147 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 23:13:41] 2025-07-27 03:13:09,147 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 23:13:41] 2025-07-27 03:13:09,147 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 23:13:41] 2025-07-27 03:13:09,147 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 23:13:41] 2025-07-27 03:13:09,147 | INFO     | job 6745736014 has completed (purged errors)
[2025-07-26 23:13:41] 2025-07-27 03:13:09,147 | INFO     | overall cleanup function is called
[2025-07-26 23:13:41] 2025-07-27 03:13:10,151 | INFO     | --- collectZombieJob: --- 10, [202163]
[2025-07-26 23:13:41] 2025-07-27 03:13:10,152 | INFO     | zombie collector waiting for pid 202163
[2025-07-26 23:13:41] 2025-07-27 03:13:10,152 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 23:13:41] 2025-07-27 03:13:10,152 | INFO     | collected zombie processes
[2025-07-26 23:13:41] 2025-07-27 03:13:10,152 | INFO     | will attempt to kill all subprocesses of pid=202163
[2025-07-26 23:13:41] 2025-07-27 03:13:10,515 | INFO     | process IDs to be killed: [202163] (in reverse order)
[2025-07-26 23:13:41] 2025-07-27 03:13:10,636 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 23:13:41] 2025-07-27 03:13:10,636 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 23:13:41] 2025-07-27 03:13:10,652 | INFO     | did not find any defunct processes belonging to 202163
[2025-07-26 23:13:41] 2025-07-27 03:13:10,666 | INFO     | did not find any defunct processes belonging to 202163
[2025-07-26 23:13:41] 2025-07-27 03:13:10,666 | INFO     | ready for new job
[2025-07-26 23:13:41] 2025-07-27 03:13:10,666 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 23:13:41] 2025-07-27 03:13:10,667 | INFO     | ***************************************
[2025-07-26 23:13:41] 2025-07-27 03:13:10,667 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 23:13:41] 2025-07-27 03:13:10,667 | INFO     | ***************************************
[2025-07-26 23:13:41] 2025-07-27 03:13:10,667 | INFO     | 
[2025-07-26 23:13:41] 2025-07-27 03:13:10,672 | INFO     | architecture information:
[2025-07-26 23:13:41] 2025-07-27 03:13:10,672 | INFO     | executing command: cat /etc/os-release
[2025-07-26 23:13:41] 2025-07-27 03:13:10,686 | INFO     | cat /etc/os-release:
[2025-07-26 23:13:41] NAME="CentOS Linux"
[2025-07-26 23:13:41] VERSION="7 (Core)"
[2025-07-26 23:13:41] ID="centos"
[2025-07-26 23:13:41] ID_LIKE="rhel fedora"
[2025-07-26 23:13:41] VERSION_ID="7"
[2025-07-26 23:13:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 23:13:41] ANSI_COLOR="0;31"
[2025-07-26 23:13:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 23:13:41] HOME_URL="https://www.centos.org/"
[2025-07-26 23:13:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 23:13:41] 
[2025-07-26 23:13:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 23:13:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 23:13:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 23:13:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 23:13:41] 
[2025-07-26 23:13:41] 2025-07-27 03:13:10,687 | INFO     | ***************************************
[2025-07-26 23:13:41] 2025-07-27 03:13:11,189 | INFO     | executing command: df -mP /tmp/boinchome/slots/15
[2025-07-26 23:13:41] 2025-07-27 03:13:11,204 | INFO     | sufficient remaining disk space (165136039936 B)
[2025-07-26 23:13:41] 2025-07-27 03:13:11,204 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 23:13:41] 2025-07-27 03:13:11,204 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 23:13:41] 2025-07-27 03:13:11,204 | INFO     | update_server=False
[2025-07-26 23:13:41] 2025-07-27 03:13:11,204 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 23:13:41] 2025-07-27 03:13:11,204 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 23:13:41] 2025-07-27 03:13:11,257 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:13:41] 2025-07-27 03:13:11,257 | INFO     | aborting loop
[2025-07-26 23:13:41] 2025-07-27 03:13:12,023 | INFO     | all data control threads have been joined
[2025-07-26 23:13:41] 2025-07-27 03:13:12,210 | INFO     | [job] retrieve thread has finished
[2025-07-26 23:13:41] 2025-07-27 03:13:12,262 | INFO     | [job] job monitor thread has finished
[2025-07-26 23:13:41] 2025-07-27 03:13:12,314 | INFO     | all job control threads have been joined
[2025-07-26 23:13:41] 2025-07-27 03:13:12,335 | INFO     | [payload] validate_post thread has finished
[2025-07-26 23:13:41] 2025-07-27 03:13:12,460 | INFO     | all payload control threads have been joined
[2025-07-26 23:13:41] 2025-07-27 03:13:12,567 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 23:13:41] 2025-07-27 03:13:12,723 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 23:13:41] 2025-07-27 03:13:12,773 | INFO     | [data] copytool_in thread has finished
[2025-07-26 23:13:41] 2025-07-27 03:13:13,028 | INFO     | [data] control thread has finished
[2025-07-26 23:13:41] 2025-07-27 03:13:13,061 | INFO     | [job] validate thread has finished
[2025-07-26 23:13:41] 2025-07-27 03:13:13,226 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 23:13:41] 2025-07-27 03:13:13,276 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 23:13:41] 2025-07-27 03:13:13,319 | INFO     | [job] control thread has finished
[2025-07-26 23:13:41] 2025-07-27 03:13:13,465 | INFO     | [payload] control thread has finished
[2025-07-26 23:13:41] 2025-07-27 03:13:13,717 | INFO     | [payload] failed_post thread has finished
[2025-07-26 23:13:41] 2025-07-27 03:13:14,136 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:13:41] 2025-07-27 03:13:14,572 | INFO     | [data] copytool_out thread has finished
[2025-07-26 23:13:41] 2025-07-27 03:13:15,141 | INFO     | [job] queue monitor thread has finished
[2025-07-26 23:13:41] 2025-07-27 03:13:15,211 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 23:13:41] 2025-07-27 03:13:22,147 | INFO     | job.realtimelogging is not enabled
[2025-07-26 23:13:41] 2025-07-27 03:13:23,149 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 23:13:41] 2025-07-27 03:13:25,111 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140690723215168)>', '<ExcThread(monitor, started 140690092709632)>']
[2025-07-26 23:13:41] 2025-07-27 03:13:30,136 | INFO     | all workflow threads have been joined
[2025-07-26 23:13:41] 2025-07-27 03:13:30,136 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 23:13:41] 2025-07-27 03:13:30,136 | INFO     | traces error code: 0
[2025-07-26 23:13:41] 2025-07-27 03:13:30,136 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 23:13:41] 2025-07-27 03:13:41,615 | INFO     | PID=195458 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-26 23:13:41] 2025-07-27 03:13:41,615 | INFO     | .. there are 15 such processes running
[2025-07-26 23:13:41] 2025-07-27 03:13:41,616 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 23:13:41] 2025-07-27 03:13:41,616 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 23:13:41] 2025-07-27 03:13:41,616 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 23:13:41] 2025-07-27 03:13:41,616 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 23:13:41] 2025-07-27 03:13:41,616 | INFO     | [monitor] control thread has ended
[2025-07-26 23:13:41] 2025-07-27 03:13:41,698 [wrapper] ==== pilot stdout END ====
[2025-07-26 23:13:41] 2025-07-27 03:13:41,701 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 23:13:41] 2025-07-27 03:13:41,704 [wrapper] pilotpid: 195458
[2025-07-26 23:13:41] 2025-07-27 03:13:41,706 [wrapper] Pilot exit status: 0
[2025-07-26 23:13:41] 2025-07-27 03:13:41,716 [wrapper] pandaids: 6745736014
[2025-07-26 23:13:41] 2025-07-27 03:13:41,800 [wrapper] cleanup supervisor_pilot  456108 195459
[2025-07-26 23:13:41] 2025-07-27 03:13:41,802 [wrapper] Test setup, not cleaning
[2025-07-26 23:13:41] 2025-07-27 03:13:41,805 [wrapper] apfmon messages muted
[2025-07-26 23:13:41] 2025-07-27 03:13:41,807 [wrapper] ==== wrapper stdout END ====
[2025-07-26 23:13:41] 2025-07-27 03:13:41,809 [wrapper] ==== wrapper stderr END ====
[2025-07-26 23:13:41]  *** Error codes and diagnostics ***
[2025-07-26 23:13:41]     "exeErrorCode": 0,
[2025-07-26 23:13:41]     "exeErrorDiag": "",
[2025-07-26 23:13:41]     "pilotErrorCode": 0,
[2025-07-26 23:13:41]     "pilotErrorDiag": "",
[2025-07-26 23:13:41]  *** Listing of results directory ***
[2025-07-26 23:13:41] total 432148
[2025-07-26 23:13:41] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 17:12 pilot3.tar.gz
[2025-07-26 23:13:41] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 17:18 queuedata.json
[2025-07-26 23:13:41] -rwx------. 1 boincer umatlas     36292 Jul 26 17:19 runpilot2-wrapper.sh
[2025-07-26 23:13:41] -rw-r--r--. 1 boincer umatlas       100 Jul 26 22:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 23:13:41] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 22:19 run_atlas
[2025-07-26 23:13:41] -rw-r--r--. 1 boincer umatlas       105 Jul 26 22:19 job.xml
[2025-07-26 23:13:41] -rw-r--r--. 2 boincer umatlas 232892279 Jul 26 22:19 EVNT.45743347._002554.pool.root.1
[2025-07-26 23:13:41] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 22:19 start_atlas.sh
[2025-07-26 23:13:41] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 22:19 shared
[2025-07-26 23:13:41] -rw-r--r--. 2 boincer umatlas    542880 Jul 26 22:19 input.tar.gz
[2025-07-26 23:13:41] -rw-r--r--. 1 boincer umatlas         0 Jul 26 22:19 boinc_lockfile
[2025-07-26 23:13:41] -rw-r--r--. 1 boincer umatlas      2560 Jul 26 22:19 pandaJob.out
[2025-07-26 23:13:41] -rw-------. 1 boincer umatlas    980117 Jul 26 22:19 agis_schedconf.cvmfs.json
[2025-07-26 23:13:41] -rw-------. 1 boincer umatlas   1593052 Jul 26 22:19 agis_ddmendpoints.agis.ALL.json
[2025-07-26 23:13:41] drwx------. 4 boincer umatlas      4096 Jul 26 22:19 pilot3
[2025-07-26 23:13:41] -rw-r--r--. 1 boincer umatlas      7173 Jul 26 23:12 init_data.xml
[2025-07-26 23:13:41] -rw-------. 1 boincer umatlas 204535511 Jul 26 23:12 HITS.45743349._044609.pool.root.1
[2025-07-26 23:13:41] -rw-r--r--. 1 boincer umatlas       529 Jul 26 23:12 boinc_task_state.xml
[2025-07-26 23:13:41] -rw-------. 1 boincer umatlas        95 Jul 26 23:12 pilot_heartbeat.json
[2025-07-26 23:13:41] -rw-------. 1 boincer umatlas      1027 Jul 26 23:12 memory_monitor_summary.json
[2025-07-26 23:13:41] -rw-------. 1 boincer umatlas    275432 Jul 26 23:13 log.45743349._044609.job.log.tgz.1
[2025-07-26 23:13:41] -rw-------. 1 boincer umatlas      7759 Jul 26 23:13 heartbeat.json
[2025-07-26 23:13:41] -rw-r--r--. 1 boincer umatlas        27 Jul 26 23:13 wrapper_checkpoint.txt
[2025-07-26 23:13:41] -rw-------. 1 boincer umatlas       822 Jul 26 23:13 pilotlog.txt
[2025-07-26 23:13:41] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 23:13 boinc_mmap_file
[2025-07-26 23:13:41] -rw-------. 1 boincer umatlas    328577 Jul 26 23:13 log.45743349._044609.job.log.1
[2025-07-26 23:13:41] -rw-------. 1 boincer umatlas       357 Jul 26 23:13 output.list
[2025-07-26 23:13:41] -rw-r--r--. 1 boincer umatlas       620 Jul 26 23:13 runtime_log
[2025-07-26 23:13:41] -rw-------. 1 boincer umatlas    624640 Jul 26 23:13 result.tar.gz
[2025-07-26 23:13:41] -rw-r--r--. 1 boincer umatlas      8674 Jul 26 23:13 runtime_log.err
[2025-07-26 23:13:41] -rw-------. 1 boincer umatlas       649 Jul 26 23:13 Lf6MDmFU1z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnATLDm4RjZIm.diag
[2025-07-26 23:13:41] -rw-r--r--. 1 boincer umatlas     21450 Jul 26 23:13 stderr.txt
[2025-07-26 23:13:41] HITS file was successfully produced:
[2025-07-26 23:13:41] -rw-------. 1 boincer umatlas 204535511 Jul 26 23:12 shared/HITS.pool.root.1
[2025-07-26 23:13:41]  *** Contents of shared directory: ***
[2025-07-26 23:13:41] total 428348
[2025-07-26 23:13:41] -rw-r--r--. 2 boincer umatlas 232892279 Jul 26 22:19 ATLAS.root_0
[2025-07-26 23:13:41] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 22:19 start_atlas.sh
[2025-07-26 23:13:41] -rw-r--r--. 2 boincer umatlas    542880 Jul 26 22:19 input.tar.gz
[2025-07-26 23:13:41] -rw-------. 1 boincer umatlas 204535511 Jul 26 23:12 HITS.pool.root.1
[2025-07-26 23:13:41] -rw-------. 1 boincer umatlas    624640 Jul 26 23:13 result.tar.gz
23:13:42 (191750): run_atlas exited; CPU time 23466.350571
23:13:42 (191750): called boinc_finish(0)

</stderr_txt>
]]>

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