Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:20:25 (2685134): wrapper (7.7.26015): starting
22:20:25 (2685134): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 22:20:25] Arguments: --nthreads 8
[2025-07-26 22:20:25] Threads: 8
[2025-07-26 22:20:25] Checking for CVMFS
[2025-07-26 22:20:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 22:20:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 22:20:25] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 22:20:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 22:20:26] 2.13.1.0 3153527 7764 142856 148797 3 63 22171955 40960001 11960 16776704 0 104759446 99.999 279685 58831 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 22:20:26] CVMFS is ok
[2025-07-26 22:20:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 22:20:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 22:20:26] Further information can be found at the LHC@home message board.
[2025-07-26 22:20:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 22:20:26] Checking for apptainer binary...
[2025-07-26 22:20:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 22:20:26] Running /usr/bin/apptainer --version
[2025-07-26 22:20:26] apptainer version 1.4.1-1.el9
[2025-07-26 22:20:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 22:20:26] c-208-37.aglt2.org
[2025-07-26 22:20:26] apptainer works
[2025-07-26 22:20:26] Set ATHENA_PROC_NUMBER=8
[2025-07-26 22:20:26] Set ATHENA_CORE_NUMBER=8
[2025-07-26 22:20:26] Starting ATLAS job with PandaID=6744914062
[2025-07-26 22:20:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 23:15:58]  *** The last 200 lines of the pilot log: ***
[2025-07-26 23:15:58]  protocol_id=None
[2025-07-26 23:15:58]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 23:15:58]  replicas=None
[2025-07-26 23:15:58]  scope=mc23_13p6TeV
[2025-07-26 23:15:58]  status=None
[2025-07-26 23:15:58]  status_code=0
[2025-07-26 23:15:58]  storage_token=
[2025-07-26 23:15:58]  surl=/tmp/boinchome/slots/14/PanDA_Pilot-6744914062/log.45743349._003907.job.log.tgz.1
[2025-07-26 23:15:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/15/9d/log.45743349._003907.job.log.tgz.1
[2025-07-26 23:15:58]  workdir=None
[2025-07-26 23:15:58] ]
[2025-07-26 23:15:58] 2025-07-27 03:15:18,031 | INFO     | transferring file log.45743349._003907.job.log.tgz.1 from /tmp/boinchome/slots/14/PanDA_Pilot-6744914062/log.45743349._003907.job.log.tgz.1 to /tmp/boinchome/slots
[2025-07-26 23:15:58] 2025-07-27 03:15:18,031 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/14/PanDA_Pilot-6744914062/log.45743349._003907.job.log.tgz.1 /tmp/boinchome/slots/14/log.45743349._003907.j
[2025-07-26 23:15:58] 2025-07-27 03:15:18,048 | INFO     | adding to output.list: log.45743349._003907.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/15/9d/log.45743349._003907.job.log.tg
[2025-07-26 23:15:58] 2025-07-27 03:15:18,048 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 23:15:58] 2025-07-27 03:15:18,048 | INFO     | summary of transferred files:
[2025-07-26 23:15:58] 2025-07-27 03:15:18,048 | INFO     |  -- lfn=log.45743349._003907.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 23:15:58] 2025-07-27 03:15:18,049 | INFO     | stage-out finished correctly
[2025-07-26 23:15:58] 2025-07-27 03:15:19,802 | INFO     | monitor loop #245: job 0:6744914062 is in state 'finished'
[2025-07-26 23:15:58] 2025-07-27 03:15:19,803 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 23:15:58] 2025-07-27 03:15:20,321 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 23:15:58] 2025-07-27 03:15:21,941 | INFO     | PID=2690680 has CPU usage=11.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-26 23:15:58] 2025-07-27 03:15:21,941 | INFO     | .. there are 15 such processes running
[2025-07-26 23:15:58] 2025-07-27 03:15:22,205 | INFO     | job 6744914062 has state=finished
[2025-07-26 23:15:58] 2025-07-27 03:15:22,205 | INFO     | preparing for final server update for job 6744914062 in state='finished'
[2025-07-26 23:15:58] 2025-07-27 03:15:22,206 | INFO     | this job has now completed (state=finished)
[2025-07-26 23:15:58] 2025-07-27 03:15:22,206 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 23:15:58] 2025-07-27 03:15:22,206 | INFO     | log transfer has been attempted: DONE
[2025-07-26 23:15:58] 2025-07-27 03:15:22,206 | INFO     | job 6744914062 has finished - writing final server update
[2025-07-26 23:15:58] 2025-07-27 03:15:22,206 | INFO     | total number of processed events: 400 (read)
[2025-07-26 23:15:58] 2025-07-27 03:15:22,208 | INFO     | executing command: lscpu
[2025-07-26 23:15:58] 2025-07-27 03:15:22,265 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 23:15:58] 2025-07-27 03:15:22,307 | INFO     | monitor loop #246: job 0:6744914062 is in state 'finished'
[2025-07-26 23:15:58] 2025-07-27 03:15:22,307 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 23:15:58] 2025-07-27 03:15:24,810 | INFO     | monitor loop #247: job 0:6744914062 is in state 'finished'
[2025-07-26 23:15:58] 2025-07-27 03:15:24,810 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 23:15:58] 2025-07-27 03:15:25,526 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 23:15:58] 2025-07-27 03:15:25,531 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3787.1555781250013
[2025-07-26 23:15:58] 2025-07-27 03:15:25,544 | INFO     | using path: /tmp/boinchome/slots/14/PanDA_Pilot-6744914062/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 23:15:58] 2025-07-27 03:15:25,544 | INFO     | extracted standard info from prmon json
[2025-07-26 23:15:58] 2025-07-27 03:15:25,544 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 23:15:58] 2025-07-27 03:15:25,544 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 23:15:58] 2025-07-27 03:15:25,545 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 23:15:58] 2025-07-27 03:15:25,545 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 23:15:58] 2025-07-27 03:15:25,546 | INFO     | fitting pss+swap vs Time
[2025-07-26 23:15:58] 2025-07-27 03:15:25,546 | INFO     | sum of square deviations: 32179208.0
[2025-07-26 23:15:58] 2025-07-27 03:15:25,546 | INFO     | sum of deviations: -445765979.0
[2025-07-26 23:15:58] 2025-07-27 03:15:25,546 | INFO     | mean x: 1753584568.0
[2025-07-26 23:15:58] 2025-07-27 03:15:25,546 | INFO     | mean y: 2563326.0425531915
[2025-07-26 23:15:58] 2025-07-27 03:15:25,546 | INFO     | -- intersect: 24294284294.246994
[2025-07-26 23:15:58] 2025-07-27 03:15:25,546 | INFO     | intersect: 24294284294.246994
[2025-07-26 23:15:58] 2025-07-27 03:15:25,546 | INFO     | chi2: 0.000427687020246715
[2025-07-26 23:15:58] 2025-07-27 03:15:25,546 | INFO     | -- intersect: 24294284294.246994
[2025-07-26 23:15:58] 2025-07-27 03:15:25,546 | INFO     | current memory leak: -13.85 B/s (using 47 data points, chi2=0.00)
[2025-07-26 23:15:58] 2025-07-27 03:15:25,546 | INFO     | could have reported an average CPU frequency of 3769 MHz (5 samples)
[2025-07-26 23:15:58] 2025-07-27 03:15:25,547 | INFO     | ..............................
[2025-07-26 23:15:58] 2025-07-27 03:15:25,547 | INFO     | . Timing measurements:
[2025-07-26 23:15:58] 2025-07-27 03:15:25,547 | INFO     | . get job = 0 s
[2025-07-26 23:15:58] 2025-07-27 03:15:25,547 | INFO     | . initial setup = 2 s
[2025-07-26 23:15:58] 2025-07-27 03:15:25,547 | INFO     | . payload setup = 5 s
[2025-07-26 23:15:58] 2025-07-27 03:15:25,547 | INFO     | . stage-in = 0 s
[2025-07-26 23:15:58] 2025-07-27 03:15:25,547 | INFO     | . payload execution = 3257 s
[2025-07-26 23:15:58] 2025-07-27 03:15:25,547 | INFO     | . stage-out = 0 s
[2025-07-26 23:15:58] 2025-07-27 03:15:25,547 | INFO     | . log creation = 0 s
[2025-07-26 23:15:58] 2025-07-27 03:15:25,547 | INFO     | ..............................
[2025-07-26 23:15:58] 2025-07-27 03:15:25,965 | INFO     | 
[2025-07-26 23:15:58] 2025-07-27 03:15:25,965 | INFO     | job summary report
[2025-07-26 23:15:58] 2025-07-27 03:15:25,965 | INFO     | --------------------------------------------------
[2025-07-26 23:15:58] 2025-07-27 03:15:25,965 | INFO     | PanDA job id: 6744914062
[2025-07-26 23:15:58] 2025-07-27 03:15:25,965 | INFO     | task id: 45743349
[2025-07-26 23:15:58] 2025-07-27 03:15:25,965 | INFO     | errors: (none)
[2025-07-26 23:15:58] 2025-07-27 03:15:25,965 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 23:15:58] 2025-07-27 03:15:25,965 | INFO     | pilot state: finished 
[2025-07-26 23:15:58] 2025-07-27 03:15:25,965 | INFO     | transexitcode: 0
[2025-07-26 23:15:58] 2025-07-27 03:15:25,965 | INFO     | exeerrorcode: 0
[2025-07-26 23:15:58] 2025-07-27 03:15:25,965 | INFO     | exeerrordiag: 
[2025-07-26 23:15:58] 2025-07-27 03:15:25,965 | INFO     | exitcode: 0
[2025-07-26 23:15:58] 2025-07-27 03:15:25,965 | INFO     | exitmsg: OK
[2025-07-26 23:15:58] 2025-07-27 03:15:25,966 | INFO     | cpuconsumptiontime: 24041 s
[2025-07-26 23:15:58] 2025-07-27 03:15:25,966 | INFO     | nevents: 400
[2025-07-26 23:15:58] 2025-07-27 03:15:25,966 | INFO     | neventsw: 0
[2025-07-26 23:15:58] 2025-07-27 03:15:25,966 | INFO     | pid: 2709984
[2025-07-26 23:15:58] 2025-07-27 03:15:25,966 | INFO     | pgrp: 2709984
[2025-07-26 23:15:58] 2025-07-27 03:15:25,966 | INFO     | corecount: 8
[2025-07-26 23:15:58] 2025-07-27 03:15:25,966 | INFO     | event service: False
[2025-07-26 23:15:58] 2025-07-27 03:15:25,966 | INFO     | sizes: {0: 2397469, 4: 2397731, 10: 2397759, 3266: 2423308, 3267: 2432308, 3269: 2432364, 3275: 2432718}
[2025-07-26 23:15:58] 2025-07-27 03:15:25,966 | INFO     | --------------------------------------------------
[2025-07-26 23:15:58] 2025-07-27 03:15:25,966 | INFO     | 
[2025-07-26 23:15:58] 2025-07-27 03:15:25,966 | INFO     | executing command: ls -lF /tmp/boinchome/slots/14
[2025-07-26 23:15:58] 2025-07-27 03:15:25,986 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 23:15:58] 2025-07-27 03:15:25,986 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 23:15:58] 2025-07-27 03:15:25,986 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 23:15:58] 2025-07-27 03:15:25,986 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 23:15:58] 2025-07-27 03:15:25,987 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 23:15:58] 2025-07-27 03:15:25,987 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 23:15:58] 2025-07-27 03:15:25,987 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 23:15:58] 2025-07-27 03:15:25,987 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 23:15:58] 2025-07-27 03:15:25,987 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 23:15:58] 2025-07-27 03:15:25,987 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 23:15:58] 2025-07-27 03:15:25,987 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 23:15:58] 2025-07-27 03:15:25,987 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 23:15:58] 2025-07-27 03:15:25,987 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 23:15:58] 2025-07-27 03:15:25,987 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 23:15:58] 2025-07-27 03:15:25,987 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 23:15:58] 2025-07-27 03:15:25,987 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 23:15:58] 2025-07-27 03:15:25,987 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 23:15:58] 2025-07-27 03:15:25,987 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 23:15:58] 2025-07-27 03:15:25,987 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 23:15:58] 2025-07-27 03:15:25,987 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 23:15:58] 2025-07-27 03:15:25,987 | INFO     | job 6744914062 has completed (purged errors)
[2025-07-26 23:15:58] 2025-07-27 03:15:25,987 | INFO     | overall cleanup function is called
[2025-07-26 23:15:58] 2025-07-27 03:15:26,995 | INFO     | --- collectZombieJob: --- 10, [2709984]
[2025-07-26 23:15:58] 2025-07-27 03:15:26,995 | INFO     | zombie collector waiting for pid 2709984
[2025-07-26 23:15:58] 2025-07-27 03:15:26,995 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 23:15:58] 2025-07-27 03:15:26,995 | INFO     | collected zombie processes
[2025-07-26 23:15:58] 2025-07-27 03:15:26,995 | INFO     | will attempt to kill all subprocesses of pid=2709984
[2025-07-26 23:15:58] 2025-07-27 03:15:27,342 | INFO     | process IDs to be killed: [2709984] (in reverse order)
[2025-07-26 23:15:58] 2025-07-27 03:15:27,456 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 23:15:58] 2025-07-27 03:15:27,456 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 23:15:58] 2025-07-27 03:15:27,472 | INFO     | did not find any defunct processes belonging to 2709984
[2025-07-26 23:15:58] 2025-07-27 03:15:27,485 | INFO     | did not find any defunct processes belonging to 2709984
[2025-07-26 23:15:58] 2025-07-27 03:15:27,485 | INFO     | ready for new job
[2025-07-26 23:15:58] 2025-07-27 03:15:27,485 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 23:15:58] 2025-07-27 03:15:27,487 | INFO     | ***************************************
[2025-07-26 23:15:58] 2025-07-27 03:15:27,487 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 23:15:58] 2025-07-27 03:15:27,487 | INFO     | ***************************************
[2025-07-26 23:15:58] 2025-07-27 03:15:27,487 | INFO     | 
[2025-07-26 23:15:58] 2025-07-27 03:15:27,491 | INFO     | architecture information:
[2025-07-26 23:15:58] 2025-07-27 03:15:27,491 | INFO     | executing command: cat /etc/os-release
[2025-07-26 23:15:58] 2025-07-27 03:15:27,505 | INFO     | cat /etc/os-release:
[2025-07-26 23:15:58] NAME="CentOS Linux"
[2025-07-26 23:15:58] VERSION="7 (Core)"
[2025-07-26 23:15:58] ID="centos"
[2025-07-26 23:15:58] ID_LIKE="rhel fedora"
[2025-07-26 23:15:58] VERSION_ID="7"
[2025-07-26 23:15:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 23:15:58] ANSI_COLOR="0;31"
[2025-07-26 23:15:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 23:15:58] HOME_URL="https://www.centos.org/"
[2025-07-26 23:15:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 23:15:58] 
[2025-07-26 23:15:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 23:15:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 23:15:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 23:15:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 23:15:58] 
[2025-07-26 23:15:58] 2025-07-27 03:15:27,505 | INFO     | ***************************************
[2025-07-26 23:15:58] 2025-07-27 03:15:28,008 | INFO     | executing command: df -mP /tmp/boinchome/slots/14
[2025-07-26 23:15:58] 2025-07-27 03:15:28,024 | INFO     | sufficient remaining disk space (166318833664 B)
[2025-07-26 23:15:58] 2025-07-27 03:15:28,025 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 23:15:58] 2025-07-27 03:15:28,025 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 23:15:58] 2025-07-27 03:15:28,025 | INFO     | update_server=False
[2025-07-26 23:15:58] 2025-07-27 03:15:28,025 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 23:15:58] 2025-07-27 03:15:28,067 | INFO     | all job control threads have been joined
[2025-07-26 23:15:58] 2025-07-27 03:15:28,317 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:15:58] 2025-07-27 03:15:28,317 | INFO     | aborting loop
[2025-07-26 23:15:58] 2025-07-27 03:15:28,607 | INFO     | all payload control threads have been joined
[2025-07-26 23:15:58] 2025-07-27 03:15:28,621 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 23:15:58] 2025-07-27 03:15:28,784 | INFO     | all data control threads have been joined
[2025-07-26 23:15:58] 2025-07-27 03:15:29,030 | INFO     | [job] retrieve thread has finished
[2025-07-26 23:15:58] 2025-07-27 03:15:29,073 | INFO     | [job] control thread has finished
[2025-07-26 23:15:58] 2025-07-27 03:15:29,322 | INFO     | [job] job monitor thread has finished
[2025-07-26 23:15:58] 2025-07-27 03:15:29,419 | INFO     | [payload] validate_post thread has finished
[2025-07-26 23:15:58] 2025-07-27 03:15:29,612 | INFO     | [payload] control thread has finished
[2025-07-26 23:15:58] 2025-07-27 03:15:29,747 | INFO     | [data] copytool_in thread has finished
[2025-07-26 23:15:58] 2025-07-27 03:15:29,789 | INFO     | [data] control thread has finished
[2025-07-26 23:15:58] 2025-07-27 03:15:30,115 | INFO     | [job] validate thread has finished
[2025-07-26 23:15:58] 2025-07-27 03:15:30,157 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 23:15:58] 2025-07-27 03:15:30,248 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 23:15:58] 2025-07-27 03:15:30,303 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 23:15:58] 2025-07-27 03:15:30,343 | INFO     | [payload] failed_post thread has finished
[2025-07-26 23:15:58] 2025-07-27 03:15:30,614 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:15:58] 2025-07-27 03:15:30,624 | INFO     | [data] copytool_out thread has finished
[2025-07-26 23:15:58] 2025-07-27 03:15:30,888 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 23:15:58] 2025-07-27 03:15:31,619 | INFO     | [job] queue monitor thread has finished
[2025-07-26 23:15:58] 2025-07-27 03:15:34,892 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 23:15:58] 2025-07-27 03:15:38,729 | INFO     | job.realtimelogging is not enabled
[2025-07-26 23:15:58] 2025-07-27 03:15:39,731 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 23:15:58] 2025-07-27 03:15:40,922 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140453463312192)>', '<ExcThread(monitor, started 140452544116480)>']
[2025-07-26 23:15:58] 2025-07-27 03:15:45,949 | INFO     | all workflow threads have been joined
[2025-07-26 23:15:58] 2025-07-27 03:15:45,949 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 23:15:58] 2025-07-27 03:15:45,949 | INFO     | traces error code: 0
[2025-07-26 23:15:58] 2025-07-27 03:15:45,950 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 23:15:58] 2025-07-27 03:15:58,452 | INFO     | PID=2690680 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 23:15:58] 2025-07-27 03:15:58,453 | INFO     | .. there are 15 such processes running
[2025-07-26 23:15:58] 2025-07-27 03:15:58,453 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 23:15:58] 2025-07-27 03:15:58,453 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 23:15:58] 2025-07-27 03:15:58,453 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 23:15:58] 2025-07-27 03:15:58,453 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 23:15:58] 2025-07-27 03:15:58,453 | INFO     | [monitor] control thread has ended
[2025-07-26 23:15:58] 2025-07-27 03:15:58,548 [wrapper] ==== pilot stdout END ====
[2025-07-26 23:15:58] 2025-07-27 03:15:58,552 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 23:15:58] 2025-07-27 03:15:58,555 [wrapper] pilotpid: 2690680
[2025-07-26 23:15:58] 2025-07-27 03:15:58,558 [wrapper] Pilot exit status: 0
[2025-07-26 23:15:58] 2025-07-27 03:15:58,568 [wrapper] pandaids: 6744914062
[2025-07-26 23:15:58] 2025-07-27 03:15:58,651 [wrapper] cleanup supervisor_pilot 2959618 2690681
[2025-07-26 23:15:58] 2025-07-27 03:15:58,654 [wrapper] Test setup, not cleaning
[2025-07-26 23:15:58] 2025-07-27 03:15:58,658 [wrapper] apfmon messages muted
[2025-07-26 23:15:58] 2025-07-27 03:15:58,661 [wrapper] ==== wrapper stdout END ====
[2025-07-26 23:15:58] 2025-07-27 03:15:58,663 [wrapper] ==== wrapper stderr END ====
[2025-07-26 23:15:58]  *** Error codes and diagnostics ***
[2025-07-26 23:15:58]     "exeErrorCode": 0,
[2025-07-26 23:15:58]     "exeErrorDiag": "",
[2025-07-26 23:15:58]     "pilotErrorCode": 0,
[2025-07-26 23:15:58]     "pilotErrorDiag": "",
[2025-07-26 23:15:58]  *** Listing of results directory ***
[2025-07-26 23:15:58] total 344628
[2025-07-26 23:15:58] -rw-r--r--. 1 boincer umatlas    530466 Jul 24 13:56 pilot3.tar.gz
[2025-07-26 23:15:58] -rwx------. 1 boincer umatlas     36292 Jul 24 14:17 runpilot2-wrapper.sh
[2025-07-26 23:15:58] -rw-r--r--. 1 boincer umatlas      5112 Jul 24 14:17 queuedata.json
[2025-07-26 23:15:58] -rw-r--r--. 1 boincer umatlas       100 Jul 26 22:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 23:15:58] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 22:20 run_atlas
[2025-07-26 23:15:58] -rw-r--r--. 1 boincer umatlas       105 Jul 26 22:20 job.xml
[2025-07-26 23:15:58] -rw-r--r--. 2 boincer umatlas 139591614 Jul 26 22:20 EVNT.45743347._000224.pool.root.1
[2025-07-26 23:15:58] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 22:20 start_atlas.sh
[2025-07-26 23:15:58] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 22:20 shared
[2025-07-26 23:15:58] -rw-r--r--. 2 boincer umatlas    542871 Jul 26 22:20 input.tar.gz
[2025-07-26 23:15:58] -rw-r--r--. 1 boincer umatlas         0 Jul 26 22:20 boinc_lockfile
[2025-07-26 23:15:58] -rw-r--r--. 1 boincer umatlas      2560 Jul 26 22:20 pandaJob.out
[2025-07-26 23:15:58] -rw-------. 1 boincer umatlas    980117 Jul 26 22:20 agis_schedconf.cvmfs.json
[2025-07-26 23:15:58] -rw-------. 1 boincer umatlas   1593052 Jul 26 22:20 agis_ddmendpoints.agis.ALL.json
[2025-07-26 23:15:58] drwx------. 4 boincer umatlas      4096 Jul 26 22:20 pilot3
[2025-07-26 23:15:58] -rw-r--r--. 1 boincer umatlas      7175 Jul 26 23:13 init_data.xml
[2025-07-26 23:15:58] -rw-------. 1 boincer umatlas 208196907 Jul 26 23:14 HITS.45743349._003907.pool.root.1
[2025-07-26 23:15:58] -rw-r--r--. 1 boincer umatlas       529 Jul 26 23:14 boinc_task_state.xml
[2025-07-26 23:15:58] -rw-------. 1 boincer umatlas      1027 Jul 26 23:15 memory_monitor_summary.json
[2025-07-26 23:15:58] -rw-------. 1 boincer umatlas    279088 Jul 26 23:15 log.45743349._003907.job.log.tgz.1
[2025-07-26 23:15:58] -rw-------. 1 boincer umatlas      7763 Jul 26 23:15 heartbeat.json
[2025-07-26 23:15:58] -rw-r--r--. 1 boincer umatlas        27 Jul 26 23:15 wrapper_checkpoint.txt
[2025-07-26 23:15:58] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 23:15 boinc_mmap_file
[2025-07-26 23:15:58] -rw-------. 1 boincer umatlas       823 Jul 26 23:15 pilotlog.txt
[2025-07-26 23:15:58] -rw-------. 1 boincer umatlas        95 Jul 26 23:15 pilot_heartbeat.json
[2025-07-26 23:15:58] -rw-------. 1 boincer umatlas    341306 Jul 26 23:15 log.45743349._003907.job.log.1
[2025-07-26 23:15:58] -rw-------. 1 boincer umatlas       357 Jul 26 23:15 output.list
[2025-07-26 23:15:58] -rw-r--r--. 1 boincer umatlas       620 Jul 26 23:15 runtime_log
[2025-07-26 23:15:58] -rw-------. 1 boincer umatlas    634880 Jul 26 23:15 result.tar.gz
[2025-07-26 23:15:58] -rw-r--r--. 1 boincer umatlas      8674 Jul 26 23:15 runtime_log.err
[2025-07-26 23:15:58] -rw-------. 1 boincer umatlas       649 Jul 26 23:15 p0rLDmegFz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKnMLDmYQ0wZm.diag
[2025-07-26 23:15:58] -rw-r--r--. 1 boincer umatlas     21888 Jul 26 23:15 stderr.txt
[2025-07-26 23:15:58] HITS file was successfully produced:
[2025-07-26 23:15:58] -rw-------. 1 boincer umatlas 208196907 Jul 26 23:14 shared/HITS.pool.root.1
[2025-07-26 23:15:58]  *** Contents of shared directory: ***
[2025-07-26 23:15:58] total 340812
[2025-07-26 23:15:58] -rw-r--r--. 2 boincer umatlas 139591614 Jul 26 22:20 ATLAS.root_0
[2025-07-26 23:15:58] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 22:20 start_atlas.sh
[2025-07-26 23:15:58] -rw-r--r--. 2 boincer umatlas    542871 Jul 26 22:20 input.tar.gz
[2025-07-26 23:15:58] -rw-------. 1 boincer umatlas 208196907 Jul 26 23:14 HITS.pool.root.1
[2025-07-26 23:15:58] -rw-------. 1 boincer umatlas    634880 Jul 26 23:15 result.tar.gz
23:16:00 (2685134): run_atlas exited; CPU time 24117.948104
23:16:00 (2685134): called boinc_finish(0)

</stderr_txt>
]]>

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