Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:10:57 (147460): wrapper (7.7.26015): starting
22:10:57 (147460): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 22:10:57] Arguments: --nthreads 8
[2025-07-26 22:10:57] Threads: 8
[2025-07-26 22:10:57] Checking for CVMFS
[2025-07-26 22:10:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 22:10:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 22:10:58] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 22:10:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 22:10:58] 2.13.1.0 2445429 3716 95272 148795 0 188 34725860 40960001 13677 16776704 0 59539573 99.999 130717 60405 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 22:10:58] CVMFS is ok
[2025-07-26 22:10:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 22:10:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 22:10:58] Further information can be found at the LHC@home message board.
[2025-07-26 22:10:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 22:10:58] Checking for apptainer binary...
[2025-07-26 22:10:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 22:10:58] Running /usr/bin/apptainer --version
[2025-07-26 22:10:58] apptainer version 1.4.1-1.el9
[2025-07-26 22:10:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 22:10:58] c-208-40.aglt2.org
[2025-07-26 22:10:58] apptainer works
[2025-07-26 22:10:58] Set ATHENA_PROC_NUMBER=8
[2025-07-26 22:10:58] Set ATHENA_CORE_NUMBER=8
[2025-07-26 22:10:58] Starting ATLAS job with PandaID=6745352193
[2025-07-26 22:10:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 23:05:39]  *** The last 200 lines of the pilot log: ***
[2025-07-26 23:05:39]  replicas=None
[2025-07-26 23:05:39]  scope=mc23_13p6TeV
[2025-07-26 23:05:39]  status=None
[2025-07-26 23:05:39]  status_code=0
[2025-07-26 23:05:39]  storage_token=
[2025-07-26 23:05:39]  surl=/tmp/boinchome/slots/6/PanDA_Pilot-6745352193/log.45743349._042263.job.log.tgz.1
[2025-07-26 23:05:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/97/14/log.45743349._042263.job.log.tgz.1
[2025-07-26 23:05:39]  workdir=None
[2025-07-26 23:05:39] ]
[2025-07-26 23:05:39] 2025-07-27 03:05:00,673 | INFO     | transferring file log.45743349._042263.job.log.tgz.1 from /tmp/boinchome/slots/6/PanDA_Pilot-6745352193/log.45743349._042263.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 23:05:39] 2025-07-27 03:05:00,673 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/6/PanDA_Pilot-6745352193/log.45743349._042263.job.log.tgz.1 /tmp/boinchome/slots/6/log.45743349._042263.job
[2025-07-26 23:05:39] 2025-07-27 03:05:00,693 | INFO     | adding to output.list: log.45743349._042263.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/97/14/log.45743349._042263.job.log.tg
[2025-07-26 23:05:39] 2025-07-27 03:05:00,694 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 23:05:39] 2025-07-27 03:05:00,694 | INFO     | summary of transferred files:
[2025-07-26 23:05:39] 2025-07-27 03:05:00,694 | INFO     |  -- lfn=log.45743349._042263.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 23:05:39] 2025-07-27 03:05:00,694 | INFO     | stage-out finished correctly
[2025-07-26 23:05:39] 2025-07-27 03:05:01,028 | WARNING  | process 157480 can no longer be monitored (due to stat problems) - aborting
[2025-07-26 23:05:39] 2025-07-27 03:05:01,028 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6745352193/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 23:05:39] 2025-07-27 03:05:01,340 | INFO     | number of running child processes to parent process 157480: 1
[2025-07-26 23:05:39] 2025-07-27 03:05:01,341 | INFO     | maximum number of monitored processes: 6
[2025-07-26 23:05:39] 2025-07-27 03:05:03,493 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 23:05:39] 2025-07-27 03:05:03,546 | INFO     | job 6745352193 has state=finished
[2025-07-26 23:05:39] 2025-07-27 03:05:03,547 | INFO     | preparing for final server update for job 6745352193 in state='finished'
[2025-07-26 23:05:39] 2025-07-27 03:05:03,547 | INFO     | this job has now completed (state=finished)
[2025-07-26 23:05:39] 2025-07-27 03:05:03,548 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 23:05:39] 2025-07-27 03:05:03,548 | INFO     | log transfer has been attempted: DONE
[2025-07-26 23:05:39] 2025-07-27 03:05:03,548 | INFO     | job 6745352193 has finished - writing final server update
[2025-07-26 23:05:39] 2025-07-27 03:05:03,548 | INFO     | total number of processed events: 400 (read)
[2025-07-26 23:05:39] 2025-07-27 03:05:03,549 | INFO     | executing command: lscpu
[2025-07-26 23:05:39] 2025-07-27 03:05:03,601 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 23:05:39] 2025-07-27 03:05:03,844 | INFO     | monitor loop #238: job 0:6745352193 is in state 'finished'
[2025-07-26 23:05:39] 2025-07-27 03:05:03,844 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 23:05:39] 2025-07-27 03:05:06,347 | INFO     | monitor loop #239: job 0:6745352193 is in state 'finished'
[2025-07-26 23:05:39] 2025-07-27 03:05:06,347 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 23:05:39] 2025-07-27 03:05:06,687 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 23:05:39] 2025-07-27 03:05:06,692 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3739.4873125000017
[2025-07-26 23:05:39] 2025-07-27 03:05:06,705 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6745352193/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 23:05:39] 2025-07-27 03:05:06,705 | INFO     | extracted standard info from prmon json
[2025-07-26 23:05:39] 2025-07-27 03:05:06,705 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 23:05:39] 2025-07-27 03:05:06,706 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 23:05:39] 2025-07-27 03:05:06,706 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 23:05:39] 2025-07-27 03:05:06,706 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 23:05:39] 2025-07-27 03:05:06,707 | INFO     | fitting pss+swap vs Time
[2025-07-26 23:05:39] 2025-07-27 03:05:06,707 | INFO     | sum of square deviations: 30168007.5
[2025-07-26 23:05:39] 2025-07-27 03:05:06,707 | INFO     | sum of deviations: 334332216.0
[2025-07-26 23:05:39] 2025-07-27 03:05:06,707 | INFO     | mean x: 1753583968.5
[2025-07-26 23:05:39] 2025-07-27 03:05:06,707 | INFO     | mean y: 2503296.565217391
[2025-07-26 23:05:39] 2025-07-27 03:05:06,707 | INFO     | -- intersect: -19431316259.82011
[2025-07-26 23:05:39] 2025-07-27 03:05:06,707 | INFO     | intersect: -19431316259.82011
[2025-07-26 23:05:39] 2025-07-27 03:05:06,707 | INFO     | chi2: 0.00028674860714096465
[2025-07-26 23:05:39] 2025-07-27 03:05:06,707 | INFO     | -- intersect: -19431316259.82011
[2025-07-26 23:05:39] 2025-07-27 03:05:06,707 | INFO     | current memory leak: 11.08 B/s (using 46 data points, chi2=0.00)
[2025-07-26 23:05:39] 2025-07-27 03:05:06,708 | INFO     | could have reported an average CPU frequency of 3760 MHz (5 samples)
[2025-07-26 23:05:39] 2025-07-27 03:05:06,708 | INFO     | ..............................
[2025-07-26 23:05:39] 2025-07-27 03:05:06,708 | INFO     | . Timing measurements:
[2025-07-26 23:05:39] 2025-07-27 03:05:06,708 | INFO     | . get job = 0 s
[2025-07-26 23:05:39] 2025-07-27 03:05:06,708 | INFO     | . initial setup = 2 s
[2025-07-26 23:05:39] 2025-07-27 03:05:06,708 | INFO     | . payload setup = 5 s
[2025-07-26 23:05:39] 2025-07-27 03:05:06,708 | INFO     | . stage-in = 0 s
[2025-07-26 23:05:39] 2025-07-27 03:05:06,708 | INFO     | . payload execution = 3208 s
[2025-07-26 23:05:39] 2025-07-27 03:05:06,708 | INFO     | . stage-out = 0 s
[2025-07-26 23:05:39] 2025-07-27 03:05:06,708 | INFO     | . log creation = 0 s
[2025-07-26 23:05:39] 2025-07-27 03:05:06,708 | INFO     | ..............................
[2025-07-26 23:05:39] 2025-07-27 03:05:06,764 | INFO     | 
[2025-07-26 23:05:39] 2025-07-27 03:05:06,764 | INFO     | job summary report
[2025-07-26 23:05:39] 2025-07-27 03:05:06,764 | INFO     | --------------------------------------------------
[2025-07-26 23:05:39] 2025-07-27 03:05:06,764 | INFO     | PanDA job id: 6745352193
[2025-07-26 23:05:39] 2025-07-27 03:05:06,764 | INFO     | task id: 45743349
[2025-07-26 23:05:39] 2025-07-27 03:05:06,764 | INFO     | errors: (none)
[2025-07-26 23:05:39] 2025-07-27 03:05:06,764 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 23:05:39] 2025-07-27 03:05:06,764 | INFO     | pilot state: finished 
[2025-07-26 23:05:39] 2025-07-27 03:05:06,764 | INFO     | transexitcode: 0
[2025-07-26 23:05:39] 2025-07-27 03:05:06,764 | INFO     | exeerrorcode: 0
[2025-07-26 23:05:39] 2025-07-27 03:05:06,764 | INFO     | exeerrordiag: 
[2025-07-26 23:05:39] 2025-07-27 03:05:06,764 | INFO     | exitcode: 0
[2025-07-26 23:05:39] 2025-07-27 03:05:06,764 | INFO     | exitmsg: OK
[2025-07-26 23:05:39] 2025-07-27 03:05:06,764 | INFO     | cpuconsumptiontime: 23895 s
[2025-07-26 23:05:39] 2025-07-27 03:05:06,764 | INFO     | nevents: 400
[2025-07-26 23:05:39] 2025-07-27 03:05:06,764 | INFO     | neventsw: 0
[2025-07-26 23:05:39] 2025-07-27 03:05:06,764 | INFO     | pid: 157480
[2025-07-26 23:05:39] 2025-07-27 03:05:06,764 | INFO     | pgrp: 157480
[2025-07-26 23:05:39] 2025-07-27 03:05:06,764 | INFO     | corecount: 8
[2025-07-26 23:05:39] 2025-07-27 03:05:06,765 | INFO     | event service: False
[2025-07-26 23:05:39] 2025-07-27 03:05:06,765 | INFO     | sizes: {0: 2397475, 4: 2397737, 11: 2397765, 3217: 2423288, 3219: 2432286, 3222: 2432342, 3225: 2432696}
[2025-07-26 23:05:39] 2025-07-27 03:05:06,765 | INFO     | --------------------------------------------------
[2025-07-26 23:05:39] 2025-07-27 03:05:06,765 | INFO     | 
[2025-07-26 23:05:39] 2025-07-27 03:05:06,765 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-07-26 23:05:39] 2025-07-27 03:05:06,784 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 23:05:39] 2025-07-27 03:05:06,784 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 23:05:39] 2025-07-27 03:05:06,784 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 23:05:39] 2025-07-27 03:05:06,784 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 23:05:39] 2025-07-27 03:05:06,784 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 23:05:39] 2025-07-27 03:05:06,785 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 23:05:39] 2025-07-27 03:05:06,785 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 23:05:39] 2025-07-27 03:05:06,785 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 23:05:39] 2025-07-27 03:05:06,785 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 23:05:39] 2025-07-27 03:05:06,785 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 23:05:39] 2025-07-27 03:05:06,785 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 23:05:39] 2025-07-27 03:05:06,785 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 23:05:39] 2025-07-27 03:05:06,785 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 23:05:39] 2025-07-27 03:05:06,785 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 23:05:39] 2025-07-27 03:05:06,785 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 23:05:39] 2025-07-27 03:05:06,785 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 23:05:39] 2025-07-27 03:05:06,785 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 23:05:39] 2025-07-27 03:05:06,785 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 23:05:39] 2025-07-27 03:05:06,785 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 23:05:39] 2025-07-27 03:05:06,785 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 23:05:39] 2025-07-27 03:05:06,785 | INFO     | job 6745352193 has completed (purged errors)
[2025-07-26 23:05:39] 2025-07-27 03:05:06,785 | INFO     | overall cleanup function is called
[2025-07-26 23:05:39] 2025-07-27 03:05:07,793 | INFO     | --- collectZombieJob: --- 10, [157480]
[2025-07-26 23:05:39] 2025-07-27 03:05:07,793 | INFO     | zombie collector waiting for pid 157480
[2025-07-26 23:05:39] 2025-07-27 03:05:07,793 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 23:05:39] 2025-07-27 03:05:07,793 | INFO     | collected zombie processes
[2025-07-26 23:05:39] 2025-07-27 03:05:07,793 | INFO     | will attempt to kill all subprocesses of pid=157480
[2025-07-26 23:05:39] 2025-07-27 03:05:08,132 | INFO     | process IDs to be killed: [157480] (in reverse order)
[2025-07-26 23:05:39] 2025-07-27 03:05:08,243 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 23:05:39] 2025-07-27 03:05:08,243 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 23:05:39] 2025-07-27 03:05:08,258 | INFO     | did not find any defunct processes belonging to 157480
[2025-07-26 23:05:39] 2025-07-27 03:05:08,271 | INFO     | did not find any defunct processes belonging to 157480
[2025-07-26 23:05:39] 2025-07-27 03:05:08,271 | INFO     | ready for new job
[2025-07-26 23:05:39] 2025-07-27 03:05:08,271 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 23:05:39] 2025-07-27 03:05:08,272 | INFO     | ***************************************
[2025-07-26 23:05:39] 2025-07-27 03:05:08,272 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 23:05:39] 2025-07-27 03:05:08,272 | INFO     | ***************************************
[2025-07-26 23:05:39] 2025-07-27 03:05:08,272 | INFO     | 
[2025-07-26 23:05:39] 2025-07-27 03:05:08,276 | INFO     | architecture information:
[2025-07-26 23:05:39] 2025-07-27 03:05:08,277 | INFO     | executing command: cat /etc/os-release
[2025-07-26 23:05:39] 2025-07-27 03:05:08,288 | INFO     | cat /etc/os-release:
[2025-07-26 23:05:39] NAME="CentOS Linux"
[2025-07-26 23:05:39] VERSION="7 (Core)"
[2025-07-26 23:05:39] ID="centos"
[2025-07-26 23:05:39] ID_LIKE="rhel fedora"
[2025-07-26 23:05:39] VERSION_ID="7"
[2025-07-26 23:05:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 23:05:39] ANSI_COLOR="0;31"
[2025-07-26 23:05:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 23:05:39] HOME_URL="https://www.centos.org/"
[2025-07-26 23:05:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 23:05:39] 
[2025-07-26 23:05:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 23:05:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 23:05:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 23:05:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 23:05:39] 
[2025-07-26 23:05:39] 2025-07-27 03:05:08,288 | INFO     | ***************************************
[2025-07-26 23:05:39] 2025-07-27 03:05:08,790 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-07-26 23:05:39] 2025-07-27 03:05:08,803 | INFO     | sufficient remaining disk space (165072076800 B)
[2025-07-26 23:05:39] 2025-07-27 03:05:08,803 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 23:05:39] 2025-07-27 03:05:08,803 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 23:05:39] 2025-07-27 03:05:08,804 | INFO     | update_server=False
[2025-07-26 23:05:39] 2025-07-27 03:05:08,804 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 23:05:39] 2025-07-27 03:05:08,804 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 23:05:39] 2025-07-27 03:05:08,850 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-26 23:05:39] 2025-07-27 03:05:08,850 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-26 23:05:39] 2025-07-27 03:05:08,850 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:05:39] 2025-07-27 03:05:08,850 | INFO     | will abort loop
[2025-07-26 23:05:39] 2025-07-27 03:05:08,907 | INFO     | all payload control threads have been joined
[2025-07-26 23:05:39] 2025-07-27 03:05:09,069 | INFO     | all data control threads have been joined
[2025-07-26 23:05:39] 2025-07-27 03:05:09,552 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 23:05:39] 2025-07-27 03:05:09,605 | INFO     | all job control threads have been joined
[2025-07-26 23:05:39] 2025-07-27 03:05:09,809 | INFO     | [job] retrieve thread has finished
[2025-07-26 23:05:39] 2025-07-27 03:05:09,856 | INFO     | [job] job monitor thread has finished
[2025-07-26 23:05:39] 2025-07-27 03:05:09,912 | INFO     | [payload] control thread has finished
[2025-07-26 23:05:39] 2025-07-27 03:05:10,074 | INFO     | [data] control thread has finished
[2025-07-26 23:05:39] 2025-07-27 03:05:10,094 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 23:05:39] 2025-07-27 03:05:10,238 | INFO     | [job] validate thread has finished
[2025-07-26 23:05:39] 2025-07-27 03:05:10,285 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 23:05:39] 2025-07-27 03:05:10,402 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 23:05:39] 2025-07-27 03:05:10,406 | INFO     | [payload] failed_post thread has finished
[2025-07-26 23:05:39] 2025-07-27 03:05:10,611 | INFO     | [job] control thread has finished
[2025-07-26 23:05:39] 2025-07-27 03:05:10,809 | INFO     | [data] copytool_out thread has finished
[2025-07-26 23:05:39] 2025-07-27 03:05:11,080 | INFO     | [data] copytool_in thread has finished
[2025-07-26 23:05:39] 2025-07-27 03:05:11,108 | INFO     | [payload] validate_post thread has finished
[2025-07-26 23:05:39] 2025-07-27 03:05:11,771 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:05:39] 2025-07-27 03:05:12,776 | INFO     | [job] queue monitor thread has finished
[2025-07-26 23:05:39] 2025-07-27 03:05:13,557 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 23:05:39] 2025-07-27 03:05:19,463 | INFO     | job.realtimelogging is not enabled
[2025-07-26 23:05:39] 2025-07-27 03:05:20,468 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 23:05:39] 2025-07-27 03:05:22,152 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139929899693888)>', '<ExcThread(monitor, started 139929254340352)>']
[2025-07-26 23:05:39] 2025-07-27 03:05:27,178 | INFO     | all workflow threads have been joined
[2025-07-26 23:05:39] 2025-07-27 03:05:27,178 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 23:05:39] 2025-07-27 03:05:27,178 | INFO     | traces error code: 0
[2025-07-26 23:05:39] 2025-07-27 03:05:27,178 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 23:05:39] 2025-07-27 03:05:39,661 | INFO     | PID=151072 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-26 23:05:39] 2025-07-27 03:05:39,662 | INFO     | .. there are 15 such processes running
[2025-07-26 23:05:39] 2025-07-27 03:05:39,662 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 23:05:39] 2025-07-27 03:05:39,662 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 23:05:39] 2025-07-27 03:05:39,662 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 23:05:39] 2025-07-27 03:05:39,662 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 23:05:39] 2025-07-27 03:05:39,663 | INFO     | [monitor] control thread has ended
[2025-07-26 23:05:39] 2025-07-27 03:05:39,748 [wrapper] ==== pilot stdout END ====
[2025-07-26 23:05:39] 2025-07-27 03:05:39,750 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 23:05:39] 2025-07-27 03:05:39,753 [wrapper] pilotpid: 151072
[2025-07-26 23:05:39] 2025-07-27 03:05:39,756 [wrapper] Pilot exit status: 0
[2025-07-26 23:05:39] 2025-07-27 03:05:39,766 [wrapper] pandaids: 6745352193
[2025-07-26 23:05:39] 2025-07-27 03:05:39,849 [wrapper] cleanup supervisor_pilot  383394 151073
[2025-07-26 23:05:39] 2025-07-27 03:05:39,851 [wrapper] Test setup, not cleaning
[2025-07-26 23:05:39] 2025-07-27 03:05:39,854 [wrapper] apfmon messages muted
[2025-07-26 23:05:39] 2025-07-27 03:05:39,856 [wrapper] ==== wrapper stdout END ====
[2025-07-26 23:05:39] 2025-07-27 03:05:39,858 [wrapper] ==== wrapper stderr END ====
[2025-07-26 23:05:39]  *** Error codes and diagnostics ***
[2025-07-26 23:05:39]     "exeErrorCode": 0,
[2025-07-26 23:05:39]     "exeErrorDiag": "",
[2025-07-26 23:05:39]     "pilotErrorCode": 0,
[2025-07-26 23:05:39]     "pilotErrorDiag": "",
[2025-07-26 23:05:39]  *** Listing of results directory ***
[2025-07-26 23:05:39] total 345648
[2025-07-26 23:05:39] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 14:15 pilot3.tar.gz
[2025-07-26 23:05:39] -rwx------. 1 boincer umatlas     36292 Jul 26 14:20 runpilot2-wrapper.sh
[2025-07-26 23:05:39] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 14:21 queuedata.json
[2025-07-26 23:05:39] -rw-r--r--. 1 boincer umatlas       100 Jul 26 22:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 23:05:39] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 22:10 run_atlas
[2025-07-26 23:05:39] -rw-r--r--. 1 boincer umatlas       105 Jul 26 22:10 job.xml
[2025-07-26 23:05:39] -rw-r--r--. 2 boincer umatlas 147436670 Jul 26 22:10 EVNT.45743347._002382.pool.root.1
[2025-07-26 23:05:39] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 22:10 start_atlas.sh
[2025-07-26 23:05:39] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 22:10 shared
[2025-07-26 23:05:39] -rw-r--r--. 2 boincer umatlas    542899 Jul 26 22:10 input.tar.gz
[2025-07-26 23:05:39] -rw-r--r--. 1 boincer umatlas         0 Jul 26 22:10 boinc_lockfile
[2025-07-26 23:05:39] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 22:10 pandaJob.out
[2025-07-26 23:05:39] -rw-------. 1 boincer umatlas    980125 Jul 26 22:11 agis_schedconf.cvmfs.json
[2025-07-26 23:05:39] -rw-------. 1 boincer umatlas   1593052 Jul 26 22:11 agis_ddmendpoints.agis.ALL.json
[2025-07-26 23:05:39] drwx------. 4 boincer umatlas      4096 Jul 26 22:11 pilot3
[2025-07-26 23:05:39] -rw-r--r--. 1 boincer umatlas      7172 Jul 26 23:04 init_data.xml
[2025-07-26 23:05:39] -rw-------. 1 boincer umatlas 201377222 Jul 26 23:04 HITS.45743349._042263.pool.root.1
[2025-07-26 23:05:39] -rw-r--r--. 1 boincer umatlas       529 Jul 26 23:04 boinc_task_state.xml
[2025-07-26 23:05:39] -rw-------. 1 boincer umatlas      1027 Jul 26 23:04 memory_monitor_summary.json
[2025-07-26 23:05:39] -rw-------. 1 boincer umatlas    291550 Jul 26 23:05 log.45743349._042263.job.log.tgz.1
[2025-07-26 23:05:39] -rw-------. 1 boincer umatlas      7761 Jul 26 23:05 heartbeat.json
[2025-07-26 23:05:39] -rw-r--r--. 1 boincer umatlas        27 Jul 26 23:05 wrapper_checkpoint.txt
[2025-07-26 23:05:39] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 23:05 boinc_mmap_file
[2025-07-26 23:05:39] -rw-------. 1 boincer umatlas       822 Jul 26 23:05 pilotlog.txt
[2025-07-26 23:05:39] -rw-------. 1 boincer umatlas        95 Jul 26 23:05 pilot_heartbeat.json
[2025-07-26 23:05:39] -rw-------. 1 boincer umatlas    334246 Jul 26 23:05 log.45743349._042263.job.log.1
[2025-07-26 23:05:39] -rw-------. 1 boincer umatlas       357 Jul 26 23:05 output.list
[2025-07-26 23:05:39] -rw-r--r--. 1 boincer umatlas       620 Jul 26 23:05 runtime_log
[2025-07-26 23:05:39] -rw-------. 1 boincer umatlas    645120 Jul 26 23:05 result.tar.gz
[2025-07-26 23:05:39] -rw-------. 1 boincer umatlas       651 Jul 26 23:05 swDNDm8gyz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPnSLDmZDnPOn.diag
[2025-07-26 23:05:39] -rw-r--r--. 1 boincer umatlas      8660 Jul 26 23:05 runtime_log.err
[2025-07-26 23:05:39] -rw-r--r--. 1 boincer umatlas     21848 Jul 26 23:05 stderr.txt
[2025-07-26 23:05:39] HITS file was successfully produced:
[2025-07-26 23:05:39] -rw-------. 1 boincer umatlas 201377222 Jul 26 23:04 shared/HITS.pool.root.1
[2025-07-26 23:05:39]  *** Contents of shared directory: ***
[2025-07-26 23:05:39] total 341828
[2025-07-26 23:05:39] -rw-r--r--. 2 boincer umatlas 147436670 Jul 26 22:10 ATLAS.root_0
[2025-07-26 23:05:39] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 22:10 start_atlas.sh
[2025-07-26 23:05:39] -rw-r--r--. 2 boincer umatlas    542899 Jul 26 22:10 input.tar.gz
[2025-07-26 23:05:39] -rw-------. 1 boincer umatlas 201377222 Jul 26 23:04 HITS.pool.root.1
[2025-07-26 23:05:39] -rw-------. 1 boincer umatlas    645120 Jul 26 23:05 result.tar.gz
23:05:41 (147460): run_atlas exited; CPU time 23977.717345
23:05:41 (147460): called boinc_finish(0)

</stderr_txt>
]]>

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