Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:22:30 (3676188): wrapper (7.7.26015): starting
22:22:30 (3676188): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 22:22:30] Arguments: --nthreads 8
[2025-07-26 22:22:30] Threads: 8
[2025-07-26 22:22:30] Checking for CVMFS
[2025-07-26 22:22:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 22:22:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 22:22:30] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 22:22:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 22:22:31] 2.12.6.0 83837 26661 295388 148797 3 325 30086767 32935937 21571 16776704 1 227080256 99.535 293540271 19478 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 22:22:31] CVMFS is ok
[2025-07-26 22:22:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 22:22:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 22:22:31] Further information can be found at the LHC@home message board.
[2025-07-26 22:22:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 22:22:31] Checking for apptainer binary...
[2025-07-26 22:22:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 22:22:31] Running /usr/bin/apptainer --version
[2025-07-26 22:22:31] apptainer version 1.4.1-1.el9
[2025-07-26 22:22:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 22:22:31] c7-2-10.aglt2.org
[2025-07-26 22:22:31] apptainer works
[2025-07-26 22:22:31] Set ATHENA_PROC_NUMBER=8
[2025-07-26 22:22:31] Set ATHENA_CORE_NUMBER=8
[2025-07-26 22:22:31] Starting ATLAS job with PandaID=6745735688
[2025-07-26 22:22:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 23:55:55]  *** The last 200 lines of the pilot log: ***
[2025-07-26 23:55:55]  protocol_id=None
[2025-07-26 23:55:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 23:55:55]  replicas=None
[2025-07-26 23:55:55]  scope=mc23_13p6TeV
[2025-07-26 23:55:55]  status=None
[2025-07-26 23:55:55]  status_code=0
[2025-07-26 23:55:55]  storage_token=
[2025-07-26 23:55:55]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6745735688/log.45743349._044402.job.log.tgz.1
[2025-07-26 23:55:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2a/d9/log.45743349._044402.job.log.tgz.1
[2025-07-26 23:55:55]  workdir=None
[2025-07-26 23:55:55] ]
[2025-07-26 23:55:55] 2025-07-27 03:55:12,648 | INFO     | transferring file log.45743349._044402.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6745735688/log.45743349._044402.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 23:55:55] 2025-07-27 03:55:12,649 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6745735688/log.45743349._044402.job.log.tgz.1 /tmp/boinchome/slots/1/log.45743349._044402.job
[2025-07-26 23:55:55] 2025-07-27 03:55:12,750 | INFO     | adding to output.list: log.45743349._044402.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2a/d9/log.45743349._044402.job.log.tg
[2025-07-26 23:55:55] 2025-07-27 03:55:12,750 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 23:55:55] 2025-07-27 03:55:12,751 | INFO     | summary of transferred files:
[2025-07-26 23:55:55] 2025-07-27 03:55:12,751 | INFO     |  -- lfn=log.45743349._044402.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 23:55:55] 2025-07-27 03:55:12,751 | INFO     | stage-out finished correctly
[2025-07-26 23:55:55] 2025-07-27 03:55:13,136 | INFO     | monitor loop #382: job 0:6745735688 is in state 'finished'
[2025-07-26 23:55:55] 2025-07-27 03:55:13,137 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 23:55:55] 2025-07-27 03:55:13,433 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 23:55:55] 2025-07-27 03:55:14,524 | INFO     | job 6745735688 has state=finished
[2025-07-26 23:55:55] 2025-07-27 03:55:14,525 | INFO     | preparing for final server update for job 6745735688 in state='finished'
[2025-07-26 23:55:55] 2025-07-27 03:55:14,525 | INFO     | this job has now completed (state=finished)
[2025-07-26 23:55:55] 2025-07-27 03:55:14,525 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 23:55:55] 2025-07-27 03:55:14,525 | INFO     | log transfer has been attempted: DONE
[2025-07-26 23:55:55] 2025-07-27 03:55:14,525 | INFO     | job 6745735688 has finished - writing final server update
[2025-07-26 23:55:55] 2025-07-27 03:55:14,526 | INFO     | total number of processed events: 400 (read)
[2025-07-26 23:55:55] 2025-07-27 03:55:14,526 | INFO     | executing command: lscpu
[2025-07-26 23:55:55] 2025-07-27 03:55:14,591 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 23:55:55] 2025-07-27 03:55:15,641 | INFO     | monitor loop #383: job 0:6745735688 is in state 'finished'
[2025-07-26 23:55:55] 2025-07-27 03:55:15,642 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 23:55:55] 2025-07-27 03:55:18,148 | INFO     | monitor loop #384: job 0:6745735688 is in state 'finished'
[2025-07-26 23:55:55] 2025-07-27 03:55:18,149 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 23:55:55] 2025-07-27 03:55:20,652 | INFO     | monitor loop #385: job 0:6745735688 is in state 'finished'
[2025-07-26 23:55:55] 2025-07-27 03:55:20,652 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 23:55:55] 2025-07-27 03:55:21,888 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 23:55:55] 2025-07-27 03:55:21,916 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3148.3222395833327
[2025-07-26 23:55:55] 2025-07-27 03:55:21,934 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6745735688/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 23:55:55] 2025-07-27 03:55:21,935 | INFO     | extracted standard info from prmon json
[2025-07-26 23:55:55] 2025-07-27 03:55:21,935 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 23:55:55] 2025-07-27 03:55:21,935 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 23:55:55] 2025-07-27 03:55:21,936 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 23:55:55] 2025-07-27 03:55:21,936 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 23:55:55] 2025-07-27 03:55:21,938 | INFO     | fitting pss+swap vs Time
[2025-07-26 23:55:55] 2025-07-27 03:55:21,938 | INFO     | sum of square deviations: 183761585.0
[2025-07-26 23:55:55] 2025-07-27 03:55:21,939 | INFO     | sum of deviations: -20005150598.5
[2025-07-26 23:55:55] 2025-07-27 03:55:21,939 | INFO     | mean x: 1753585840.5
[2025-07-26 23:55:55] 2025-07-27 03:55:21,939 | INFO     | mean y: 2413607.345238095
[2025-07-26 23:55:55] 2025-07-27 03:55:21,939 | INFO     | -- intersect: 190906017462.30603
[2025-07-26 23:55:55] 2025-07-27 03:55:21,939 | INFO     | intersect: 190906017462.30603
[2025-07-26 23:55:55] 2025-07-27 03:55:21,939 | INFO     | chi2: 0.22069175542597114
[2025-07-26 23:55:55] 2025-07-27 03:55:21,939 | INFO     | -- intersect: 190906017462.30603
[2025-07-26 23:55:55] 2025-07-27 03:55:21,940 | INFO     | current memory leak: -108.86 B/s (using 84 data points, chi2=0.22)
[2025-07-26 23:55:55] 2025-07-27 03:55:21,940 | INFO     | could have reported an average CPU frequency of 3149 MHz (7 samples)
[2025-07-26 23:55:55] 2025-07-27 03:55:21,940 | INFO     | ..............................
[2025-07-26 23:55:55] 2025-07-27 03:55:21,940 | INFO     | . Timing measurements:
[2025-07-26 23:55:55] 2025-07-27 03:55:21,940 | INFO     | . get job = 0 s
[2025-07-26 23:55:55] 2025-07-27 03:55:21,940 | INFO     | . initial setup = 2 s
[2025-07-26 23:55:55] 2025-07-27 03:55:21,941 | INFO     | . payload setup = 10 s
[2025-07-26 23:55:55] 2025-07-27 03:55:21,941 | INFO     | . stage-in = 0 s
[2025-07-26 23:55:55] 2025-07-27 03:55:21,941 | INFO     | . payload execution = 5509 s
[2025-07-26 23:55:55] 2025-07-27 03:55:21,941 | INFO     | . stage-out = 1 s
[2025-07-26 23:55:55] 2025-07-27 03:55:21,941 | INFO     | . log creation = 0 s
[2025-07-26 23:55:55] 2025-07-27 03:55:21,941 | INFO     | ..............................
[2025-07-26 23:55:55] 2025-07-27 03:55:22,397 | INFO     | 
[2025-07-26 23:55:55] 2025-07-27 03:55:22,398 | INFO     | job summary report
[2025-07-26 23:55:55] 2025-07-27 03:55:22,398 | INFO     | --------------------------------------------------
[2025-07-26 23:55:55] 2025-07-27 03:55:22,398 | INFO     | PanDA job id: 6745735688
[2025-07-26 23:55:55] 2025-07-27 03:55:22,398 | INFO     | task id: 45743349
[2025-07-26 23:55:55] 2025-07-27 03:55:22,398 | INFO     | errors: (none)
[2025-07-26 23:55:55] 2025-07-27 03:55:22,398 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 23:55:55] 2025-07-27 03:55:22,398 | INFO     | pilot state: finished 
[2025-07-26 23:55:55] 2025-07-27 03:55:22,398 | INFO     | transexitcode: 0
[2025-07-26 23:55:55] 2025-07-27 03:55:22,398 | INFO     | exeerrorcode: 0
[2025-07-26 23:55:55] 2025-07-27 03:55:22,398 | INFO     | exeerrordiag: 
[2025-07-26 23:55:55] 2025-07-27 03:55:22,398 | INFO     | exitcode: 0
[2025-07-26 23:55:55] 2025-07-27 03:55:22,398 | INFO     | exitmsg: OK
[2025-07-26 23:55:55] 2025-07-27 03:55:22,398 | INFO     | cpuconsumptiontime: 37155 s
[2025-07-26 23:55:55] 2025-07-27 03:55:22,398 | INFO     | nevents: 400
[2025-07-26 23:55:55] 2025-07-27 03:55:22,398 | INFO     | neventsw: 0
[2025-07-26 23:55:55] 2025-07-27 03:55:22,398 | INFO     | pid: 3695246
[2025-07-26 23:55:55] 2025-07-27 03:55:22,399 | INFO     | pgrp: 3695246
[2025-07-26 23:55:55] 2025-07-27 03:55:22,399 | INFO     | corecount: 8
[2025-07-26 23:55:55] 2025-07-27 03:55:22,399 | INFO     | event service: False
[2025-07-26 23:55:55] 2025-07-27 03:55:22,399 | INFO     | sizes: {0: 2397474, 7: 2397736, 11: 2397764, 5524: 2424360, 5527: 2433414, 5536: 2433552}
[2025-07-26 23:55:55] 2025-07-27 03:55:22,399 | INFO     | --------------------------------------------------
[2025-07-26 23:55:55] 2025-07-27 03:55:22,399 | INFO     | 
[2025-07-26 23:55:55] 2025-07-27 03:55:22,399 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-26 23:55:55] 2025-07-27 03:55:22,438 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 23:55:55] 2025-07-27 03:55:22,438 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 23:55:55] 2025-07-27 03:55:22,438 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 23:55:55] 2025-07-27 03:55:22,438 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 23:55:55] 2025-07-27 03:55:22,439 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 23:55:55] 2025-07-27 03:55:22,439 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 23:55:55] 2025-07-27 03:55:22,439 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 23:55:55] 2025-07-27 03:55:22,439 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 23:55:55] 2025-07-27 03:55:22,439 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 23:55:55] 2025-07-27 03:55:22,439 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 23:55:55] 2025-07-27 03:55:22,439 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 23:55:55] 2025-07-27 03:55:22,439 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 23:55:55] 2025-07-27 03:55:22,439 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 23:55:55] 2025-07-27 03:55:22,439 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 23:55:55] 2025-07-27 03:55:22,439 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 23:55:55] 2025-07-27 03:55:22,439 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 23:55:55] 2025-07-27 03:55:22,439 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 23:55:55] 2025-07-27 03:55:22,440 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 23:55:55] 2025-07-27 03:55:22,440 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 23:55:55] 2025-07-27 03:55:22,440 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 23:55:55] 2025-07-27 03:55:22,440 | INFO     | job 6745735688 has completed (purged errors)
[2025-07-26 23:55:55] 2025-07-27 03:55:22,440 | INFO     | overall cleanup function is called
[2025-07-26 23:55:55] 2025-07-27 03:55:23,449 | INFO     | --- collectZombieJob: --- 10, [3695246]
[2025-07-26 23:55:55] 2025-07-27 03:55:23,449 | INFO     | zombie collector waiting for pid 3695246
[2025-07-26 23:55:55] 2025-07-27 03:55:23,449 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 23:55:55] 2025-07-27 03:55:23,449 | INFO     | collected zombie processes
[2025-07-26 23:55:55] 2025-07-27 03:55:23,449 | INFO     | will attempt to kill all subprocesses of pid=3695246
[2025-07-26 23:55:55] 2025-07-27 03:55:24,050 | INFO     | process IDs to be killed: [3695246] (in reverse order)
[2025-07-26 23:55:55] 2025-07-27 03:55:24,284 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 23:55:55] 2025-07-27 03:55:24,285 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 23:55:55] 2025-07-27 03:55:24,314 | INFO     | did not find any defunct processes belonging to 3695246
[2025-07-26 23:55:55] 2025-07-27 03:55:24,341 | INFO     | did not find any defunct processes belonging to 3695246
[2025-07-26 23:55:55] 2025-07-27 03:55:24,342 | INFO     | ready for new job
[2025-07-26 23:55:55] 2025-07-27 03:55:24,342 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 23:55:55] 2025-07-27 03:55:24,344 | INFO     | ***************************************
[2025-07-26 23:55:55] 2025-07-27 03:55:24,345 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 23:55:55] 2025-07-27 03:55:24,345 | INFO     | ***************************************
[2025-07-26 23:55:55] 2025-07-27 03:55:24,345 | INFO     | 
[2025-07-26 23:55:55] 2025-07-27 03:55:24,362 | INFO     | architecture information:
[2025-07-26 23:55:55] 2025-07-27 03:55:24,370 | INFO     | executing command: cat /etc/os-release
[2025-07-26 23:55:55] 2025-07-27 03:55:24,405 | INFO     | cat /etc/os-release:
[2025-07-26 23:55:55] NAME="CentOS Linux"
[2025-07-26 23:55:55] VERSION="7 (Core)"
[2025-07-26 23:55:55] ID="centos"
[2025-07-26 23:55:55] ID_LIKE="rhel fedora"
[2025-07-26 23:55:55] VERSION_ID="7"
[2025-07-26 23:55:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 23:55:55] ANSI_COLOR="0;31"
[2025-07-26 23:55:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 23:55:55] HOME_URL="https://www.centos.org/"
[2025-07-26 23:55:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 23:55:55] 
[2025-07-26 23:55:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 23:55:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 23:55:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 23:55:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 23:55:55] 
[2025-07-26 23:55:55] 2025-07-27 03:55:24,405 | INFO     | ***************************************
[2025-07-26 23:55:55] 2025-07-27 03:55:24,912 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-26 23:55:55] 2025-07-27 03:55:24,950 | INFO     | sufficient remaining disk space (75952553984 B)
[2025-07-26 23:55:55] 2025-07-27 03:55:24,950 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 23:55:55] 2025-07-27 03:55:24,951 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 23:55:55] 2025-07-27 03:55:24,951 | INFO     | update_server=False
[2025-07-26 23:55:55] 2025-07-27 03:55:24,951 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 23:55:55] 2025-07-27 03:55:24,951 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:55:55] 2025-07-27 03:55:24,952 | INFO     | aborting loop
[2025-07-26 23:55:55] 2025-07-27 03:55:24,952 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 23:55:55] 2025-07-27 03:55:24,974 | INFO     | all job control threads have been joined
[2025-07-26 23:55:55] 2025-07-27 03:55:25,224 | INFO     | all data control threads have been joined
[2025-07-26 23:55:55] 2025-07-27 03:55:25,278 | INFO     | all payload control threads have been joined
[2025-07-26 23:55:55] 2025-07-27 03:55:25,956 | INFO     | [job] retrieve thread has finished
[2025-07-26 23:55:55] 2025-07-27 03:55:25,974 | INFO     | [job] job monitor thread has finished
[2025-07-26 23:55:55] 2025-07-27 03:55:25,980 | INFO     | [job] control thread has finished
[2025-07-26 23:55:55] 2025-07-27 03:55:25,988 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 23:55:55] 2025-07-27 03:55:26,046 | INFO     | [data] copytool_in thread has finished
[2025-07-26 23:55:55] 2025-07-27 03:55:26,186 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 23:55:55] 2025-07-27 03:55:26,207 | INFO     | [job] validate thread has finished
[2025-07-26 23:55:55] 2025-07-27 03:55:26,229 | INFO     | [data] control thread has finished
[2025-07-26 23:55:55] 2025-07-27 03:55:26,283 | INFO     | [payload] control thread has finished
[2025-07-26 23:55:55] 2025-07-27 03:55:27,013 | INFO     | [payload] failed_post thread has finished
[2025-07-26 23:55:55] 2025-07-27 03:55:27,052 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:55:55] 2025-07-27 03:55:27,359 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 23:55:55] 2025-07-27 03:55:27,362 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 23:55:55] 2025-07-27 03:55:27,406 | INFO     | [payload] validate_post thread has finished
[2025-07-26 23:55:55] 2025-07-27 03:55:27,996 | INFO     | [data] copytool_out thread has finished
[2025-07-26 23:55:55] 2025-07-27 03:55:28,058 | INFO     | [job] queue monitor thread has finished
[2025-07-26 23:55:55] 2025-07-27 03:55:28,960 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 23:55:55] 2025-07-27 03:55:35,229 | INFO     | job.realtimelogging is not enabled
[2025-07-26 23:55:55] 2025-07-27 03:55:36,236 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 23:55:55] 2025-07-27 03:55:37,863 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139951339763520)>', '<ExcThread(monitor, started 139950611744512)>']
[2025-07-26 23:55:55] 2025-07-27 03:55:42,888 | INFO     | all workflow threads have been joined
[2025-07-26 23:55:55] 2025-07-27 03:55:42,889 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 23:55:55] 2025-07-27 03:55:42,890 | INFO     | traces error code: 0
[2025-07-26 23:55:55] 2025-07-27 03:55:42,890 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 23:55:55] 2025-07-27 03:55:55,519 | INFO     | PID=3680841 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 23:55:55] 2025-07-27 03:55:55,520 | INFO     | .. there are 26 such processes running
[2025-07-26 23:55:55] 2025-07-27 03:55:55,520 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 23:55:55] 2025-07-27 03:55:55,520 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 23:55:55] 2025-07-27 03:55:55,521 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 23:55:55] 2025-07-27 03:55:55,521 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 23:55:55] 2025-07-27 03:55:55,521 | INFO     | [monitor] control thread has ended
[2025-07-26 23:55:55] 2025-07-27 03:55:55,680 [wrapper] ==== pilot stdout END ====
[2025-07-26 23:55:55] 2025-07-27 03:55:55,683 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 23:55:55] 2025-07-27 03:55:55,688 [wrapper] pilotpid: 3680841
[2025-07-26 23:55:55] 2025-07-27 03:55:55,695 [wrapper] Pilot exit status: 0
[2025-07-26 23:55:55] 2025-07-27 03:55:55,720 [wrapper] pandaids: 6745735688
[2025-07-26 23:55:55] 2025-07-27 03:55:55,855 [wrapper] cleanup supervisor_pilot 1369074 3680842
[2025-07-26 23:55:55] 2025-07-27 03:55:55,858 [wrapper] Test setup, not cleaning
[2025-07-26 23:55:55] 2025-07-27 03:55:55,861 [wrapper] apfmon messages muted
[2025-07-26 23:55:55] 2025-07-27 03:55:55,865 [wrapper] ==== wrapper stdout END ====
[2025-07-26 23:55:55] 2025-07-27 03:55:55,867 [wrapper] ==== wrapper stderr END ====
[2025-07-26 23:55:55]  *** Error codes and diagnostics ***
[2025-07-26 23:55:55]     "exeErrorCode": 0,
[2025-07-26 23:55:55]     "exeErrorDiag": "",
[2025-07-26 23:55:55]     "pilotErrorCode": 0,
[2025-07-26 23:55:55]     "pilotErrorDiag": "",
[2025-07-26 23:55:55]  *** Listing of results directory ***
[2025-07-26 23:55:55] total 437388
[2025-07-26 23:55:55] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 16:42 pilot3.tar.gz
[2025-07-26 23:55:55] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 17:04 queuedata.json
[2025-07-26 23:55:55] -rwx------. 1 boincer umatlas     36292 Jul 26 17:04 runpilot2-wrapper.sh
[2025-07-26 23:55:55] -rw-r--r--. 1 boincer umatlas       100 Jul 26 22:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 23:55:55] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 22:22 run_atlas
[2025-07-26 23:55:55] -rw-r--r--. 1 boincer umatlas       105 Jul 26 22:22 job.xml
[2025-07-26 23:55:55] -rw-r--r--. 2 boincer umatlas 230827583 Jul 26 22:22 EVNT.45743347._002545.pool.root.1
[2025-07-26 23:55:55] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 22:22 shared
[2025-07-26 23:55:55] -rw-r--r--. 2 boincer umatlas    542891 Jul 26 22:22 input.tar.gz
[2025-07-26 23:55:55] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 22:22 start_atlas.sh
[2025-07-26 23:55:55] -rw-r--r--. 1 boincer umatlas         0 Jul 26 22:22 boinc_lockfile
[2025-07-26 23:55:55] -rw-r--r--. 1 boincer umatlas      2562 Jul 26 22:22 pandaJob.out
[2025-07-26 23:55:55] -rw-------. 1 boincer umatlas    980117 Jul 26 22:22 agis_schedconf.cvmfs.json
[2025-07-26 23:55:55] -rw-------. 1 boincer umatlas   1593052 Jul 26 22:22 agis_ddmendpoints.agis.ALL.json
[2025-07-26 23:55:55] drwx------. 4 boincer umatlas      4096 Jul 26 22:22 pilot3
[2025-07-26 23:55:55] -rw-r--r--. 1 boincer umatlas      6931 Jul 26 23:49 init_data.xml
[2025-07-26 23:55:55] -rw-------. 1 boincer umatlas 211473100 Jul 26 23:54 HITS.45743349._044402.pool.root.1
[2025-07-26 23:55:55] -rw-r--r--. 1 boincer umatlas       529 Jul 26 23:54 boinc_task_state.xml
[2025-07-26 23:55:55] -rw-------. 1 boincer umatlas      1042 Jul 26 23:55 memory_monitor_summary.json
[2025-07-26 23:55:55] -rw-------. 1 boincer umatlas    325832 Jul 26 23:55 log.45743349._044402.job.log.tgz.1
[2025-07-26 23:55:55] -rw-------. 1 boincer umatlas      7787 Jul 26 23:55 heartbeat.json
[2025-07-26 23:55:55] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 23:55 boinc_mmap_file
[2025-07-26 23:55:55] -rw-r--r--. 1 boincer umatlas        27 Jul 26 23:55 wrapper_checkpoint.txt
[2025-07-26 23:55:55] -rw-------. 1 boincer umatlas       823 Jul 26 23:55 pilotlog.txt
[2025-07-26 23:55:55] -rw-------. 1 boincer umatlas        95 Jul 26 23:55 pilot_heartbeat.json
[2025-07-26 23:55:55] -rw-------. 1 boincer umatlas    528754 Jul 26 23:55 log.45743349._044402.job.log.1
[2025-07-26 23:55:55] -rw-------. 1 boincer umatlas       357 Jul 26 23:55 output.list
[2025-07-26 23:55:55] -rw-r--r--. 1 boincer umatlas       620 Jul 26 23:55 runtime_log
[2025-07-26 23:55:55] -rw-------. 1 boincer umatlas    870400 Jul 26 23:55 result.tar.gz
[2025-07-26 23:55:55] -rw-r--r--. 1 boincer umatlas      8655 Jul 26 23:55 runtime_log.err
[2025-07-26 23:55:55] -rw-------. 1 boincer umatlas       653 Jul 26 23:55 1bAODmYF1z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmS8SLDmKeCAXo.diag
[2025-07-26 23:55:55] -rw-r--r--. 1 boincer umatlas     21808 Jul 26 23:55 stderr.txt
[2025-07-26 23:55:56] HITS file was successfully produced:
[2025-07-26 23:55:56] -rw-------. 1 boincer umatlas 211473100 Jul 26 23:54 shared/HITS.pool.root.1
[2025-07-26 23:55:56]  *** Contents of shared directory: ***
[2025-07-26 23:55:56] total 433344
[2025-07-26 23:55:56] -rw-r--r--. 2 boincer umatlas 230827583 Jul 26 22:22 ATLAS.root_0
[2025-07-26 23:55:56] -rw-r--r--. 2 boincer umatlas    542891 Jul 26 22:22 input.tar.gz
[2025-07-26 23:55:56] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 22:22 start_atlas.sh
[2025-07-26 23:55:56] -rw-------. 1 boincer umatlas 211473100 Jul 26 23:54 HITS.pool.root.1
[2025-07-26 23:55:56] -rw-------. 1 boincer umatlas    870400 Jul 26 23:55 result.tar.gz
23:55:57 (3676188): run_atlas exited; CPU time 37304.538335
23:55:57 (3676188): called boinc_finish(0)

</stderr_txt>
]]>

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