Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:07:50 (100042): wrapper (7.7.26015): starting
22:07:50 (100042): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 22:07:50] Arguments: --nthreads 8
[2025-07-26 22:07:50] Threads: 8
[2025-07-26 22:07:50] Checking for CVMFS
[2025-07-26 22:07:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 22:07:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 22:07:50] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 22:07:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 22:07:51] 2.13.1.0 2445429 3712 95272 148795 3 188 34725840 40960001 12908 16776704 0 59407993 99.999 130717 60405 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 22:07:51] CVMFS is ok
[2025-07-26 22:07:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 22:07:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 22:07:51] Further information can be found at the LHC@home message board.
[2025-07-26 22:07:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 22:07:51] Checking for apptainer binary...
[2025-07-26 22:07:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 22:07:51] Running /usr/bin/apptainer --version
[2025-07-26 22:07:51] apptainer version 1.4.1-1.el9
[2025-07-26 22:07:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 22:07:51] c-208-40.aglt2.org
[2025-07-26 22:07:51] apptainer works
[2025-07-26 22:07:51] Set ATHENA_PROC_NUMBER=8
[2025-07-26 22:07:51] Set ATHENA_CORE_NUMBER=8
[2025-07-26 22:07:51] Starting ATLAS job with PandaID=6745561770
[2025-07-26 22:07:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 23:05:24]  *** The last 200 lines of the pilot log: ***
[2025-07-26 23:05:24]  lfn=log.45743349._044166.job.log.tgz.1
[2025-07-26 23:05:24]  mtime=0
[2025-07-26 23:05:24]  protocol_id=None
[2025-07-26 23:05:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 23:05:24]  replicas=None
[2025-07-26 23:05:24]  scope=mc23_13p6TeV
[2025-07-26 23:05:24]  status=None
[2025-07-26 23:05:24]  status_code=0
[2025-07-26 23:05:24]  storage_token=
[2025-07-26 23:05:24]  surl=/tmp/boinchome/slots/7/PanDA_Pilot-6745561770/log.45743349._044166.job.log.tgz.1
[2025-07-26 23:05:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/be/a1/log.45743349._044166.job.log.tgz.1
[2025-07-26 23:05:24]  workdir=None
[2025-07-26 23:05:24] ]
[2025-07-26 23:05:24] 2025-07-27 03:04:47,286 | INFO     | transferring file log.45743349._044166.job.log.tgz.1 from /tmp/boinchome/slots/7/PanDA_Pilot-6745561770/log.45743349._044166.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 23:05:24] 2025-07-27 03:04:47,286 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/7/PanDA_Pilot-6745561770/log.45743349._044166.job.log.tgz.1 /tmp/boinchome/slots/7/log.45743349._044166.job
[2025-07-26 23:05:24] 2025-07-27 03:04:47,302 | INFO     | adding to output.list: log.45743349._044166.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/be/a1/log.45743349._044166.job.log.tg
[2025-07-26 23:05:24] 2025-07-27 03:04:47,302 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 23:05:24] 2025-07-27 03:04:47,302 | INFO     | summary of transferred files:
[2025-07-26 23:05:24] 2025-07-27 03:04:47,303 | INFO     |  -- lfn=log.45743349._044166.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 23:05:24] 2025-07-27 03:04:47,303 | INFO     | stage-out finished correctly
[2025-07-26 23:05:24] 2025-07-27 03:04:47,561 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 23:05:24] 2025-07-27 03:04:47,926 | INFO     | monitor loop #250: job 0:6745561770 is in state 'finished'
[2025-07-26 23:05:24] 2025-07-27 03:04:47,926 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 23:05:24] 2025-07-27 03:04:48,241 | INFO     | job 6745561770 has state=finished
[2025-07-26 23:05:24] 2025-07-27 03:04:48,241 | INFO     | preparing for final server update for job 6745561770 in state='finished'
[2025-07-26 23:05:24] 2025-07-27 03:04:48,242 | INFO     | this job has now completed (state=finished)
[2025-07-26 23:05:24] 2025-07-27 03:04:48,242 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 23:05:24] 2025-07-27 03:04:48,242 | INFO     | log transfer has been attempted: DONE
[2025-07-26 23:05:24] 2025-07-27 03:04:48,242 | INFO     | job 6745561770 has finished - writing final server update
[2025-07-26 23:05:24] 2025-07-27 03:04:48,242 | INFO     | total number of processed events: 400 (read)
[2025-07-26 23:05:24] 2025-07-27 03:04:48,242 | INFO     | executing command: lscpu
[2025-07-26 23:05:24] 2025-07-27 03:04:48,296 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 23:05:24] 2025-07-27 03:04:50,429 | INFO     | monitor loop #251: job 0:6745561770 is in state 'finished'
[2025-07-26 23:05:24] 2025-07-27 03:04:50,430 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 23:05:24] 2025-07-27 03:04:51,395 | INFO     | PID=110464 has CPU usage=10.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 23:05:24] 2025-07-27 03:04:51,396 | INFO     | .. there are 16 such processes running
[2025-07-26 23:05:24] 2025-07-27 03:04:51,659 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 23:05:24] 2025-07-27 03:04:51,663 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3730.9047812500003
[2025-07-26 23:05:24] 2025-07-27 03:04:51,676 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6745561770/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 23:05:24] 2025-07-27 03:04:51,677 | INFO     | extracted standard info from prmon json
[2025-07-26 23:05:24] 2025-07-27 03:04:51,677 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 23:05:24] 2025-07-27 03:04:51,677 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 23:05:24] 2025-07-27 03:04:51,677 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 23:05:24] 2025-07-27 03:04:51,677 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 23:05:24] 2025-07-27 03:04:51,678 | INFO     | fitting pss+swap vs Time
[2025-07-26 23:05:24] 2025-07-27 03:04:51,678 | INFO     | sum of square deviations: 36465800.0
[2025-07-26 23:05:24] 2025-07-27 03:04:51,678 | INFO     | sum of deviations: 469481193.0
[2025-07-26 23:05:24] 2025-07-27 03:04:51,678 | INFO     | mean x: 1753583872.0
[2025-07-26 23:05:24] 2025-07-27 03:04:51,678 | INFO     | mean y: 2510639.6530612246
[2025-07-26 23:05:24] 2025-07-27 03:04:51,678 | INFO     | -- intersect: -22574113162.70749
[2025-07-26 23:05:24] 2025-07-27 03:04:51,678 | INFO     | intersect: -22574113162.70749
[2025-07-26 23:05:24] 2025-07-27 03:04:51,678 | INFO     | chi2: 0.0003099626706070833
[2025-07-26 23:05:24] 2025-07-27 03:04:51,679 | INFO     | -- intersect: -22574113162.70749
[2025-07-26 23:05:24] 2025-07-27 03:04:51,679 | INFO     | current memory leak: 12.87 B/s (using 49 data points, chi2=0.00)
[2025-07-26 23:05:24] 2025-07-27 03:04:51,679 | INFO     | could have reported an average CPU frequency of 3743 MHz (5 samples)
[2025-07-26 23:05:24] 2025-07-27 03:04:51,679 | INFO     | ..............................
[2025-07-26 23:05:24] 2025-07-27 03:04:51,679 | INFO     | . Timing measurements:
[2025-07-26 23:05:24] 2025-07-27 03:04:51,679 | INFO     | . get job = 0 s
[2025-07-26 23:05:24] 2025-07-27 03:04:51,679 | INFO     | . initial setup = 2 s
[2025-07-26 23:05:24] 2025-07-27 03:04:51,679 | INFO     | . payload setup = 4 s
[2025-07-26 23:05:24] 2025-07-27 03:04:51,679 | INFO     | . stage-in = 0 s
[2025-07-26 23:05:24] 2025-07-27 03:04:51,679 | INFO     | . payload execution = 3383 s
[2025-07-26 23:05:24] 2025-07-27 03:04:51,679 | INFO     | . stage-out = 0 s
[2025-07-26 23:05:24] 2025-07-27 03:04:51,679 | INFO     | . log creation = 0 s
[2025-07-26 23:05:24] 2025-07-27 03:04:51,679 | INFO     | ..............................
[2025-07-26 23:05:24] 2025-07-27 03:04:51,864 | INFO     | 
[2025-07-26 23:05:24] 2025-07-27 03:04:51,864 | INFO     | job summary report
[2025-07-26 23:05:24] 2025-07-27 03:04:51,865 | INFO     | --------------------------------------------------
[2025-07-26 23:05:24] 2025-07-27 03:04:51,865 | INFO     | PanDA job id: 6745561770
[2025-07-26 23:05:24] 2025-07-27 03:04:51,865 | INFO     | task id: 45743349
[2025-07-26 23:05:24] 2025-07-27 03:04:51,865 | INFO     | errors: (none)
[2025-07-26 23:05:24] 2025-07-27 03:04:51,865 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 23:05:24] 2025-07-27 03:04:51,865 | INFO     | pilot state: finished 
[2025-07-26 23:05:24] 2025-07-27 03:04:51,865 | INFO     | transexitcode: 0
[2025-07-26 23:05:24] 2025-07-27 03:04:51,865 | INFO     | exeerrorcode: 0
[2025-07-26 23:05:24] 2025-07-27 03:04:51,865 | INFO     | exeerrordiag: 
[2025-07-26 23:05:24] 2025-07-27 03:04:51,865 | INFO     | exitcode: 0
[2025-07-26 23:05:24] 2025-07-27 03:04:51,865 | INFO     | exitmsg: OK
[2025-07-26 23:05:24] 2025-07-27 03:04:51,865 | INFO     | cpuconsumptiontime: 24968 s
[2025-07-26 23:05:24] 2025-07-27 03:04:51,865 | INFO     | nevents: 400
[2025-07-26 23:05:24] 2025-07-27 03:04:51,865 | INFO     | neventsw: 0
[2025-07-26 23:05:24] 2025-07-27 03:04:51,865 | INFO     | pid: 117290
[2025-07-26 23:05:24] 2025-07-27 03:04:51,865 | INFO     | pgrp: 117290
[2025-07-26 23:05:24] 2025-07-27 03:04:51,865 | INFO     | corecount: 8
[2025-07-26 23:05:24] 2025-07-27 03:04:51,865 | INFO     | event service: False
[2025-07-26 23:05:24] 2025-07-27 03:04:51,865 | INFO     | sizes: {0: 2397419, 4: 2397681, 11: 2397709, 3392: 2423386, 3393: 2432439, 3394: 2432439, 3398: 2432793}
[2025-07-26 23:05:24] 2025-07-27 03:04:51,865 | INFO     | --------------------------------------------------
[2025-07-26 23:05:24] 2025-07-27 03:04:51,865 | INFO     | 
[2025-07-26 23:05:24] 2025-07-27 03:04:51,865 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-07-26 23:05:24] 2025-07-27 03:04:51,881 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 23:05:24] 2025-07-27 03:04:51,881 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 23:05:24] 2025-07-27 03:04:51,881 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 23:05:24] 2025-07-27 03:04:51,881 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 23:05:24] 2025-07-27 03:04:51,881 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 23:05:24] 2025-07-27 03:04:51,881 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 23:05:24] 2025-07-27 03:04:51,881 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 23:05:24] 2025-07-27 03:04:51,881 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 23:05:24] 2025-07-27 03:04:51,881 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 23:05:24] 2025-07-27 03:04:51,881 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 23:05:24] 2025-07-27 03:04:51,881 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 23:05:24] 2025-07-27 03:04:51,881 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 23:05:24] 2025-07-27 03:04:51,881 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 23:05:24] 2025-07-27 03:04:51,881 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 23:05:24] 2025-07-27 03:04:51,881 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 23:05:24] 2025-07-27 03:04:51,881 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 23:05:24] 2025-07-27 03:04:51,881 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 23:05:24] 2025-07-27 03:04:51,882 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 23:05:24] 2025-07-27 03:04:51,882 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 23:05:24] 2025-07-27 03:04:51,882 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 23:05:24] 2025-07-27 03:04:51,882 | INFO     | job 6745561770 has completed (purged errors)
[2025-07-26 23:05:24] 2025-07-27 03:04:51,882 | INFO     | overall cleanup function is called
[2025-07-26 23:05:24] 2025-07-27 03:04:52,888 | INFO     | --- collectZombieJob: --- 10, [117290]
[2025-07-26 23:05:24] 2025-07-27 03:04:52,888 | INFO     | zombie collector waiting for pid 117290
[2025-07-26 23:05:24] 2025-07-27 03:04:52,889 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 23:05:24] 2025-07-27 03:04:52,889 | INFO     | collected zombie processes
[2025-07-26 23:05:24] 2025-07-27 03:04:52,889 | INFO     | will attempt to kill all subprocesses of pid=117290
[2025-07-26 23:05:24] 2025-07-27 03:04:53,238 | INFO     | process IDs to be killed: [117290] (in reverse order)
[2025-07-26 23:05:24] 2025-07-27 03:04:53,350 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 23:05:24] 2025-07-27 03:04:53,350 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 23:05:24] 2025-07-27 03:04:53,367 | INFO     | did not find any defunct processes belonging to 117290
[2025-07-26 23:05:24] 2025-07-27 03:04:53,380 | INFO     | did not find any defunct processes belonging to 117290
[2025-07-26 23:05:24] 2025-07-27 03:04:53,380 | INFO     | ready for new job
[2025-07-26 23:05:24] 2025-07-27 03:04:53,380 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 23:05:24] 2025-07-27 03:04:53,381 | INFO     | ***************************************
[2025-07-26 23:05:24] 2025-07-27 03:04:53,381 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 23:05:24] 2025-07-27 03:04:53,381 | INFO     | ***************************************
[2025-07-26 23:05:24] 2025-07-27 03:04:53,381 | INFO     | 
[2025-07-26 23:05:24] 2025-07-27 03:04:53,386 | INFO     | architecture information:
[2025-07-26 23:05:24] 2025-07-27 03:04:53,386 | INFO     | executing command: cat /etc/os-release
[2025-07-26 23:05:24] 2025-07-27 03:04:53,401 | INFO     | cat /etc/os-release:
[2025-07-26 23:05:24] NAME="CentOS Linux"
[2025-07-26 23:05:24] VERSION="7 (Core)"
[2025-07-26 23:05:24] ID="centos"
[2025-07-26 23:05:24] ID_LIKE="rhel fedora"
[2025-07-26 23:05:24] VERSION_ID="7"
[2025-07-26 23:05:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 23:05:24] ANSI_COLOR="0;31"
[2025-07-26 23:05:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 23:05:24] HOME_URL="https://www.centos.org/"
[2025-07-26 23:05:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 23:05:24] 
[2025-07-26 23:05:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 23:05:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 23:05:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 23:05:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 23:05:24] 
[2025-07-26 23:05:24] 2025-07-27 03:04:53,402 | INFO     | ***************************************
[2025-07-26 23:05:24] 2025-07-27 03:04:53,904 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-07-26 23:05:24] 2025-07-27 03:04:53,921 | INFO     | sufficient remaining disk space (165085708288 B)
[2025-07-26 23:05:24] 2025-07-27 03:04:53,922 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 23:05:24] 2025-07-27 03:04:53,922 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 23:05:24] 2025-07-27 03:04:53,922 | INFO     | update_server=False
[2025-07-26 23:05:24] 2025-07-27 03:04:53,922 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 23:05:24] 2025-07-27 03:04:53,922 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 23:05:24] 2025-07-27 03:04:53,936 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:05:24] 2025-07-27 03:04:53,936 | INFO     | aborting loop
[2025-07-26 23:05:24] 2025-07-27 03:04:54,612 | INFO     | all data control threads have been joined
[2025-07-26 23:05:24] 2025-07-27 03:04:54,914 | INFO     | all job control threads have been joined
[2025-07-26 23:05:24] 2025-07-27 03:04:54,927 | INFO     | [job] retrieve thread has finished
[2025-07-26 23:05:24] 2025-07-27 03:04:54,941 | INFO     | [job] job monitor thread has finished
[2025-07-26 23:05:24] 2025-07-27 03:04:55,128 | INFO     | [payload] failed_post thread has finished
[2025-07-26 23:05:24] 2025-07-27 03:04:55,313 | INFO     | all payload control threads have been joined
[2025-07-26 23:05:24] 2025-07-27 03:04:55,366 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 23:05:24] 2025-07-27 03:04:55,372 | INFO     | [data] copytool_in thread has finished
[2025-07-26 23:05:24] 2025-07-27 03:04:55,615 | INFO     | [data] control thread has finished
[2025-07-26 23:05:24] 2025-07-27 03:04:55,789 | INFO     | [payload] validate_post thread has finished
[2025-07-26 23:05:24] 2025-07-27 03:04:55,919 | INFO     | [job] control thread has finished
[2025-07-26 23:05:24] 2025-07-27 03:04:56,111 | INFO     | [job] validate thread has finished
[2025-07-26 23:05:24] 2025-07-27 03:04:56,148 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 23:05:24] 2025-07-27 03:04:56,189 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 23:05:24] 2025-07-27 03:04:56,318 | INFO     | [payload] control thread has finished
[2025-07-26 23:05:24] 2025-07-27 03:04:56,329 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 23:05:24] 2025-07-27 03:04:56,745 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:05:24] 2025-07-27 03:04:57,372 | INFO     | [data] copytool_out thread has finished
[2025-07-26 23:05:24] 2025-07-27 03:04:57,750 | INFO     | [job] queue monitor thread has finished
[2025-07-26 23:05:24] 2025-07-27 03:04:57,928 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 23:05:24] 2025-07-27 03:05:04,463 | INFO     | job.realtimelogging is not enabled
[2025-07-26 23:05:24] 2025-07-27 03:05:05,468 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 23:05:24] 2025-07-27 03:05:06,682 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140136804960064)>', '<ExcThread(monitor, started 140136167753472)>']
[2025-07-26 23:05:24] 2025-07-27 03:05:11,707 | INFO     | all workflow threads have been joined
[2025-07-26 23:05:24] 2025-07-27 03:05:11,707 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 23:05:24] 2025-07-27 03:05:11,707 | INFO     | traces error code: 0
[2025-07-26 23:05:24] 2025-07-27 03:05:11,707 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 23:05:24] 2025-07-27 03:05:23,894 | INFO     | PID=110464 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-26 23:05:24] 2025-07-27 03:05:23,895 | INFO     | .. there are 16 such processes running
[2025-07-26 23:05:24] 2025-07-27 03:05:23,895 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 23:05:24] 2025-07-27 03:05:23,895 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 23:05:24] 2025-07-27 03:05:23,895 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 23:05:24] 2025-07-27 03:05:23,895 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 23:05:24] 2025-07-27 03:05:23,895 | INFO     | [monitor] control thread has ended
[2025-07-26 23:05:24] 2025-07-27 03:05:24,001 [wrapper] ==== pilot stdout END ====
[2025-07-26 23:05:24] 2025-07-27 03:05:24,003 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 23:05:24] 2025-07-27 03:05:24,006 [wrapper] pilotpid: 110464
[2025-07-26 23:05:24] 2025-07-27 03:05:24,008 [wrapper] Pilot exit status: 0
[2025-07-26 23:05:24] 2025-07-27 03:05:24,018 [wrapper] pandaids: 6745561770
[2025-07-26 23:05:24] 2025-07-27 03:05:24,100 [wrapper] cleanup supervisor_pilot  360650 110466
[2025-07-26 23:05:24] 2025-07-27 03:05:24,103 [wrapper] Test setup, not cleaning
[2025-07-26 23:05:24] 2025-07-27 03:05:24,106 [wrapper] apfmon messages muted
[2025-07-26 23:05:24] 2025-07-27 03:05:24,108 [wrapper] ==== wrapper stdout END ====
[2025-07-26 23:05:24] 2025-07-27 03:05:24,110 [wrapper] ==== wrapper stderr END ====
[2025-07-26 23:05:24]  *** Error codes and diagnostics ***
[2025-07-26 23:05:24]     "exeErrorCode": 0,
[2025-07-26 23:05:24]     "exeErrorDiag": "",
[2025-07-26 23:05:24]     "pilotErrorCode": 0,
[2025-07-26 23:05:24]     "pilotErrorDiag": "",
[2025-07-26 23:05:24]  *** Listing of results directory ***
[2025-07-26 23:05:24] total 435280
[2025-07-26 23:05:24] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 16:42 pilot3.tar.gz
[2025-07-26 23:05:24] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 16:46 queuedata.json
[2025-07-26 23:05:24] -rwx------. 1 boincer umatlas     36292 Jul 26 16:47 runpilot2-wrapper.sh
[2025-07-26 23:05:24] -rw-r--r--. 1 boincer umatlas       100 Jul 26 22:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 23:05:24] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 22:07 run_atlas
[2025-07-26 23:05:24] -rw-r--r--. 1 boincer umatlas       105 Jul 26 22:07 job.xml
[2025-07-26 23:05:24] -rw-r--r--. 2 boincer umatlas 229938487 Jul 26 22:07 EVNT.45743347._000253.pool.root.1
[2025-07-26 23:05:24] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 22:07 start_atlas.sh
[2025-07-26 23:05:24] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 22:07 shared
[2025-07-26 23:05:24] -rw-r--r--. 2 boincer umatlas    542889 Jul 26 22:07 input.tar.gz
[2025-07-26 23:05:24] -rw-r--r--. 1 boincer umatlas         0 Jul 26 22:07 boinc_lockfile
[2025-07-26 23:05:24] -rw-r--r--. 1 boincer umatlas      2560 Jul 26 22:07 pandaJob.out
[2025-07-26 23:05:24] -rw-------. 1 boincer umatlas    980125 Jul 26 22:07 agis_schedconf.cvmfs.json
[2025-07-26 23:05:24] -rw-------. 1 boincer umatlas   1593052 Jul 26 22:07 agis_ddmendpoints.agis.ALL.json
[2025-07-26 23:05:24] drwx------. 4 boincer umatlas      4096 Jul 26 22:08 pilot3
[2025-07-26 23:05:24] -rw-r--r--. 1 boincer umatlas      7172 Jul 26 23:04 init_data.xml
[2025-07-26 23:05:24] -rw-r--r--. 1 boincer umatlas       529 Jul 26 23:04 boinc_task_state.xml
[2025-07-26 23:05:24] -rw-------. 1 boincer umatlas 210637853 Jul 26 23:04 HITS.45743349._044166.pool.root.1
[2025-07-26 23:05:24] -rw-------. 1 boincer umatlas      1027 Jul 26 23:04 memory_monitor_summary.json
[2025-07-26 23:05:24] -rw-------. 1 boincer umatlas    286731 Jul 26 23:04 log.45743349._044166.job.log.tgz.1
[2025-07-26 23:05:24] -rw-------. 1 boincer umatlas      7762 Jul 26 23:04 heartbeat.json
[2025-07-26 23:05:24] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 23:05 boinc_mmap_file
[2025-07-26 23:05:24] -rw-r--r--. 1 boincer umatlas        27 Jul 26 23:05 wrapper_checkpoint.txt
[2025-07-26 23:05:24] -rw-------. 1 boincer umatlas       822 Jul 26 23:05 pilotlog.txt
[2025-07-26 23:05:24] -rw-------. 1 boincer umatlas        95 Jul 26 23:05 pilot_heartbeat.json
[2025-07-26 23:05:24] -rw-------. 1 boincer umatlas    347910 Jul 26 23:05 log.45743349._044166.job.log.1
[2025-07-26 23:05:24] -rw-------. 1 boincer umatlas       357 Jul 26 23:05 output.list
[2025-07-26 23:05:24] -rw-r--r--. 1 boincer umatlas       620 Jul 26 23:05 runtime_log
[2025-07-26 23:05:24] -rw-------. 1 boincer umatlas    655360 Jul 26 23:05 result.tar.gz
[2025-07-26 23:05:24] -rw-r--r--. 1 boincer umatlas      8660 Jul 26 23:05 runtime_log.err
[2025-07-26 23:05:24] -rw-------. 1 boincer umatlas       651 Jul 26 23:05 LE0LDmNz0z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmcQ1KDmWTMwmm.diag
[2025-07-26 23:05:24] -rw-r--r--. 1 boincer umatlas     21705 Jul 26 23:05 stderr.txt
[2025-07-26 23:05:24] HITS file was successfully produced:
[2025-07-26 23:05:24] -rw-------. 1 boincer umatlas 210637853 Jul 26 23:04 shared/HITS.pool.root.1
[2025-07-26 23:05:24]  *** Contents of shared directory: ***
[2025-07-26 23:05:24] total 431452
[2025-07-26 23:05:24] -rw-r--r--. 2 boincer umatlas 229938487 Jul 26 22:07 ATLAS.root_0
[2025-07-26 23:05:24] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 22:07 start_atlas.sh
[2025-07-26 23:05:24] -rw-r--r--. 2 boincer umatlas    542889 Jul 26 22:07 input.tar.gz
[2025-07-26 23:05:24] -rw-------. 1 boincer umatlas 210637853 Jul 26 23:04 HITS.pool.root.1
[2025-07-26 23:05:24] -rw-------. 1 boincer umatlas    655360 Jul 26 23:05 result.tar.gz
23:05:26 (100042): run_atlas exited; CPU time 25041.801635
23:05:26 (100042): called boinc_finish(0)

</stderr_txt>
]]>

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