Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:22:40 (2766222): wrapper (7.7.26015): starting
23:22:40 (2766222): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 23:22:40] Arguments: --nthreads 12
[2025-07-26 23:22:40] Threads: 12
[2025-07-26 23:22:40] Checking for CVMFS
[2025-07-26 23:22:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 23:22:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 23:22:40] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 23:22:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 23:22:41] 2.13.1.0 407057 12903 282708 148799 3 64 34986688 40960001 10557 16776704 0 23298906 99.682 38863690 35272 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 23:22:41] CVMFS is ok
[2025-07-26 23:22:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 23:22:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 23:22:41] Further information can be found at the LHC@home message board.
[2025-07-26 23:22:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 23:22:41] Checking for apptainer binary...
[2025-07-26 23:22:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 23:22:41] Running /usr/bin/apptainer --version
[2025-07-26 23:22:41] apptainer version 1.4.1-1.el9
[2025-07-26 23:22:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 23:22:41] c-210-31-3.aglt2.org
[2025-07-26 23:22:41] apptainer works
[2025-07-26 23:22:41] Set ATHENA_PROC_NUMBER=12
[2025-07-26 23:22:41] Set ATHENA_CORE_NUMBER=12
[2025-07-26 23:22:41] Starting ATLAS job with PandaID=6745735658
[2025-07-26 23:22:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 00:39:35]  *** The last 200 lines of the pilot log: ***
[2025-07-27 00:39:35]  status=None
[2025-07-27 00:39:35]  status_code=0
[2025-07-27 00:39:35]  storage_token=
[2025-07-27 00:39:35]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745735658/log.45743349._044372.job.log.tgz.1
[2025-07-27 00:39:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d0/e1/log.45743349._044372.job.log.tgz.1
[2025-07-27 00:39:35]  workdir=None
[2025-07-27 00:39:35] ]
[2025-07-27 00:39:35] 2025-07-27 04:38:53,607 | INFO     | transferring file log.45743349._044372.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745735658/log.45743349._044372.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 00:39:35] 2025-07-27 04:38:53,607 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745735658/log.45743349._044372.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._044372.job
[2025-07-27 00:39:35] 2025-07-27 04:38:53,630 | INFO     | adding to output.list: log.45743349._044372.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d0/e1/log.45743349._044372.job.log.tg
[2025-07-27 00:39:35] 2025-07-27 04:38:53,632 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 00:39:35] 2025-07-27 04:38:53,632 | INFO     | summary of transferred files:
[2025-07-27 00:39:35] 2025-07-27 04:38:53,632 | INFO     |  -- lfn=log.45743349._044372.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 00:39:35] 2025-07-27 04:38:53,632 | INFO     | stage-out finished correctly
[2025-07-27 00:39:35] 2025-07-27 04:38:54,610 | INFO     | monitor loop #335: job 0:6745735658 is in state 'finished'
[2025-07-27 00:39:35] 2025-07-27 04:38:54,610 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 00:39:35] 2025-07-27 04:38:55,838 | INFO     | 4564s have passed since pilot start - server update state is 'RUNNING'
[2025-07-27 00:39:35] 2025-07-27 04:38:55,946 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 00:39:35] 2025-07-27 04:38:57,110 | INFO     | PID=2770629 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 00:39:35] 2025-07-27 04:38:57,110 | INFO     | .. there are 12 such processes running
[2025-07-27 00:39:35] 2025-07-27 04:38:57,114 | INFO     | monitor loop #336: job 0:6745735658 is in state 'finished'
[2025-07-27 00:39:35] 2025-07-27 04:38:57,114 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 00:39:35] 2025-07-27 04:38:57,589 | INFO     | job 6745735658 has state=finished
[2025-07-27 00:39:35] 2025-07-27 04:38:57,589 | INFO     | preparing for final server update for job 6745735658 in state='finished'
[2025-07-27 00:39:35] 2025-07-27 04:38:57,589 | INFO     | this job has now completed (state=finished)
[2025-07-27 00:39:35] 2025-07-27 04:38:57,590 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 00:39:35] 2025-07-27 04:38:57,590 | INFO     | log transfer has been attempted: DONE
[2025-07-27 00:39:35] 2025-07-27 04:38:57,590 | INFO     | job 6745735658 has finished - writing final server update
[2025-07-27 00:39:35] 2025-07-27 04:38:57,590 | INFO     | total number of processed events: 400 (read)
[2025-07-27 00:39:35] 2025-07-27 04:38:57,590 | INFO     | executing command: lscpu
[2025-07-27 00:39:35] 2025-07-27 04:38:57,639 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 00:39:35] 2025-07-27 04:38:59,618 | INFO     | monitor loop #337: job 0:6745735658 is in state 'finished'
[2025-07-27 00:39:35] 2025-07-27 04:38:59,618 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 00:39:35] 2025-07-27 04:39:02,121 | INFO     | monitor loop #338: job 0:6745735658 is in state 'finished'
[2025-07-27 00:39:35] 2025-07-27 04:39:02,121 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 00:39:35] 2025-07-27 04:39:02,560 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 00:39:35] 2025-07-27 04:39:02,563 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2716.782285714286
[2025-07-27 00:39:35] 2025-07-27 04:39:02,573 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745735658/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 00:39:35] 2025-07-27 04:39:02,574 | INFO     | extracted standard info from prmon json
[2025-07-27 00:39:35] 2025-07-27 04:39:02,575 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 00:39:35] 2025-07-27 04:39:02,575 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 00:39:35] 2025-07-27 04:39:02,575 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 00:39:35] 2025-07-27 04:39:02,575 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 00:39:35] 2025-07-27 04:39:02,577 | INFO     | fitting pss+swap vs Time
[2025-07-27 00:39:35] 2025-07-27 04:39:02,577 | INFO     | sum of square deviations: 97479037.0
[2025-07-27 00:39:35] 2025-07-27 04:39:02,577 | INFO     | sum of deviations: -10460117007.999998
[2025-07-27 00:39:35] 2025-07-27 04:39:02,577 | INFO     | mean x: 1753588953.5
[2025-07-27 00:39:35] 2025-07-27 04:39:02,577 | INFO     | mean y: 3002762.294117647
[2025-07-27 00:39:35] 2025-07-27 04:39:02,577 | INFO     | -- intersect: 188174185019.1138
[2025-07-27 00:39:35] 2025-07-27 04:39:02,577 | INFO     | intersect: 188174185019.1138
[2025-07-27 00:39:35] 2025-07-27 04:39:02,577 | INFO     | chi2: 0.1553472034985774
[2025-07-27 00:39:35] 2025-07-27 04:39:02,577 | INFO     | -- intersect: 188174185019.1138
[2025-07-27 00:39:35] 2025-07-27 04:39:02,578 | INFO     | current memory leak: -107.31 B/s (using 68 data points, chi2=0.16)
[2025-07-27 00:39:35] 2025-07-27 04:39:02,578 | INFO     | could have reported an average CPU frequency of 2635 MHz (6 samples)
[2025-07-27 00:39:35] 2025-07-27 04:39:02,578 | INFO     | ..............................
[2025-07-27 00:39:35] 2025-07-27 04:39:02,578 | INFO     | . Timing measurements:
[2025-07-27 00:39:35] 2025-07-27 04:39:02,578 | INFO     | . get job = 0 s
[2025-07-27 00:39:35] 2025-07-27 04:39:02,578 | INFO     | . initial setup = 2 s
[2025-07-27 00:39:35] 2025-07-27 04:39:02,578 | INFO     | . payload setup = 8 s
[2025-07-27 00:39:35] 2025-07-27 04:39:02,578 | INFO     | . stage-in = 0 s
[2025-07-27 00:39:35] 2025-07-27 04:39:02,578 | INFO     | . payload execution = 4528 s
[2025-07-27 00:39:35] 2025-07-27 04:39:02,578 | INFO     | . stage-out = 0 s
[2025-07-27 00:39:35] 2025-07-27 04:39:02,579 | INFO     | . log creation = 0 s
[2025-07-27 00:39:35] 2025-07-27 04:39:02,579 | INFO     | ..............................
[2025-07-27 00:39:35] 2025-07-27 04:39:02,663 | INFO     | 
[2025-07-27 00:39:35] 2025-07-27 04:39:02,663 | INFO     | job summary report
[2025-07-27 00:39:35] 2025-07-27 04:39:02,663 | INFO     | --------------------------------------------------
[2025-07-27 00:39:35] 2025-07-27 04:39:02,663 | INFO     | PanDA job id: 6745735658
[2025-07-27 00:39:35] 2025-07-27 04:39:02,663 | INFO     | task id: 45743349
[2025-07-27 00:39:35] 2025-07-27 04:39:02,663 | INFO     | errors: (none)
[2025-07-27 00:39:35] 2025-07-27 04:39:02,663 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 00:39:35] 2025-07-27 04:39:02,663 | INFO     | pilot state: finished 
[2025-07-27 00:39:35] 2025-07-27 04:39:02,663 | INFO     | transexitcode: 0
[2025-07-27 00:39:35] 2025-07-27 04:39:02,664 | INFO     | exeerrorcode: 0
[2025-07-27 00:39:35] 2025-07-27 04:39:02,664 | INFO     | exeerrordiag: 
[2025-07-27 00:39:35] 2025-07-27 04:39:02,664 | INFO     | exitcode: 0
[2025-07-27 00:39:35] 2025-07-27 04:39:02,664 | INFO     | exitmsg: OK
[2025-07-27 00:39:35] 2025-07-27 04:39:02,664 | INFO     | cpuconsumptiontime: 46282 s
[2025-07-27 00:39:35] 2025-07-27 04:39:02,664 | INFO     | nevents: 400
[2025-07-27 00:39:35] 2025-07-27 04:39:02,664 | INFO     | neventsw: 0
[2025-07-27 00:39:35] 2025-07-27 04:39:02,664 | INFO     | pid: 2777218
[2025-07-27 00:39:35] 2025-07-27 04:39:02,664 | INFO     | pgrp: 2777218
[2025-07-27 00:39:35] 2025-07-27 04:39:02,664 | INFO     | corecount: 12
[2025-07-27 00:39:35] 2025-07-27 04:39:02,664 | INFO     | event service: False
[2025-07-27 00:39:35] 2025-07-27 04:39:02,664 | INFO     | sizes: {0: 2397475, 6: 2397737, 11: 2397765, 4540: 2423789, 4543: 2432787, 4545: 2432843, 4552: 2433165}
[2025-07-27 00:39:35] 2025-07-27 04:39:02,664 | INFO     | --------------------------------------------------
[2025-07-27 00:39:35] 2025-07-27 04:39:02,664 | INFO     | 
[2025-07-27 00:39:35] 2025-07-27 04:39:02,665 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 00:39:35] 2025-07-27 04:39:02,686 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 00:39:35] 2025-07-27 04:39:02,686 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 00:39:35] 2025-07-27 04:39:02,686 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 00:39:35] 2025-07-27 04:39:02,686 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 00:39:35] 2025-07-27 04:39:02,686 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 00:39:35] 2025-07-27 04:39:02,686 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 00:39:35] 2025-07-27 04:39:02,686 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 00:39:35] 2025-07-27 04:39:02,687 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 00:39:35] 2025-07-27 04:39:02,687 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 00:39:35] 2025-07-27 04:39:02,687 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 00:39:35] 2025-07-27 04:39:02,687 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 00:39:35] 2025-07-27 04:39:02,687 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 00:39:35] 2025-07-27 04:39:02,687 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 00:39:35] 2025-07-27 04:39:02,687 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 00:39:35] 2025-07-27 04:39:02,687 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 00:39:35] 2025-07-27 04:39:02,687 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 00:39:35] 2025-07-27 04:39:02,687 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 00:39:35] 2025-07-27 04:39:02,687 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 00:39:35] 2025-07-27 04:39:02,687 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 00:39:35] 2025-07-27 04:39:02,688 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 00:39:35] 2025-07-27 04:39:02,688 | INFO     | job 6745735658 has completed (purged errors)
[2025-07-27 00:39:35] 2025-07-27 04:39:02,688 | INFO     | overall cleanup function is called
[2025-07-27 00:39:35] 2025-07-27 04:39:03,697 | INFO     | --- collectZombieJob: --- 10, [2777218]
[2025-07-27 00:39:35] 2025-07-27 04:39:03,698 | INFO     | zombie collector waiting for pid 2777218
[2025-07-27 00:39:35] 2025-07-27 04:39:03,698 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 00:39:35] 2025-07-27 04:39:03,699 | INFO     | collected zombie processes
[2025-07-27 00:39:35] 2025-07-27 04:39:03,699 | INFO     | will attempt to kill all subprocesses of pid=2777218
[2025-07-27 00:39:35] 2025-07-27 04:39:03,959 | INFO     | process IDs to be killed: [2777218] (in reverse order)
[2025-07-27 00:39:35] 2025-07-27 04:39:04,035 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 00:39:35] 2025-07-27 04:39:04,035 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 00:39:35] 2025-07-27 04:39:04,044 | INFO     | did not find any defunct processes belonging to 2777218
[2025-07-27 00:39:35] 2025-07-27 04:39:04,053 | INFO     | did not find any defunct processes belonging to 2777218
[2025-07-27 00:39:35] 2025-07-27 04:39:04,053 | INFO     | ready for new job
[2025-07-27 00:39:35] 2025-07-27 04:39:04,053 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 00:39:35] 2025-07-27 04:39:04,055 | INFO     | ***************************************
[2025-07-27 00:39:35] 2025-07-27 04:39:04,055 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 00:39:35] 2025-07-27 04:39:04,055 | INFO     | ***************************************
[2025-07-27 00:39:35] 2025-07-27 04:39:04,055 | INFO     | 
[2025-07-27 00:39:35] 2025-07-27 04:39:04,058 | INFO     | architecture information:
[2025-07-27 00:39:35] 2025-07-27 04:39:04,058 | INFO     | executing command: cat /etc/os-release
[2025-07-27 00:39:35] 2025-07-27 04:39:04,073 | INFO     | cat /etc/os-release:
[2025-07-27 00:39:35] NAME="CentOS Linux"
[2025-07-27 00:39:35] VERSION="7 (Core)"
[2025-07-27 00:39:35] ID="centos"
[2025-07-27 00:39:35] ID_LIKE="rhel fedora"
[2025-07-27 00:39:35] VERSION_ID="7"
[2025-07-27 00:39:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 00:39:35] ANSI_COLOR="0;31"
[2025-07-27 00:39:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 00:39:35] HOME_URL="https://www.centos.org/"
[2025-07-27 00:39:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 00:39:35] 
[2025-07-27 00:39:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 00:39:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 00:39:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 00:39:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 00:39:35] 
[2025-07-27 00:39:35] 2025-07-27 04:39:04,073 | INFO     | ***************************************
[2025-07-27 00:39:35] 2025-07-27 04:39:04,576 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 00:39:35] 2025-07-27 04:39:04,592 | INFO     | sufficient remaining disk space (75363254272 B)
[2025-07-27 00:39:35] 2025-07-27 04:39:04,593 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 00:39:35] 2025-07-27 04:39:04,593 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 00:39:35] 2025-07-27 04:39:04,593 | INFO     | update_server=False
[2025-07-27 00:39:35] 2025-07-27 04:39:04,593 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 00:39:35] 2025-07-27 04:39:04,593 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 00:39:35] 2025-07-27 04:39:04,593 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 00:39:35] 2025-07-27 04:39:04,625 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 00:39:35] 2025-07-27 04:39:04,625 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 00:39:35] 2025-07-27 04:39:04,625 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 00:39:35] 2025-07-27 04:39:04,625 | INFO     | will abort loop
[2025-07-27 00:39:35] 2025-07-27 04:39:04,647 | INFO     | all payload control threads have been joined
[2025-07-27 00:39:35] 2025-07-27 04:39:05,552 | INFO     | all data control threads have been joined
[2025-07-27 00:39:35] 2025-07-27 04:39:05,569 | INFO     | all job control threads have been joined
[2025-07-27 00:39:35] 2025-07-27 04:39:05,598 | INFO     | [job] retrieve thread has finished
[2025-07-27 00:39:35] 2025-07-27 04:39:05,599 | INFO     | [job] queue monitor thread has finished
[2025-07-27 00:39:35] 2025-07-27 04:39:05,630 | INFO     | [job] job monitor thread has finished
[2025-07-27 00:39:35] 2025-07-27 04:39:05,652 | INFO     | [payload] control thread has finished
[2025-07-27 00:39:35] 2025-07-27 04:39:05,904 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 00:39:35] 2025-07-27 04:39:06,262 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 00:39:35] 2025-07-27 04:39:06,490 | INFO     | [payload] failed_post thread has finished
[2025-07-27 00:39:35] 2025-07-27 04:39:06,534 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 00:39:35] 2025-07-27 04:39:06,557 | INFO     | [data] control thread has finished
[2025-07-27 00:39:35] 2025-07-27 04:39:06,574 | INFO     | [job] control thread has finished
[2025-07-27 00:39:35] 2025-07-27 04:39:06,599 | INFO     | [data] copytool_out thread has finished
[2025-07-27 00:39:35] 2025-07-27 04:39:06,627 | INFO     | [job] validate thread has finished
[2025-07-27 00:39:35] 2025-07-27 04:39:06,857 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 00:39:35] 2025-07-27 04:39:06,931 | INFO     | [data] copytool_in thread has finished
[2025-07-27 00:39:35] 2025-07-27 04:39:06,956 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 00:39:35] 2025-07-27 04:39:06,975 | INFO     | [payload] validate_post thread has finished
[2025-07-27 00:39:35] 2025-07-27 04:39:10,540 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 00:39:35] 2025-07-27 04:39:11,620 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140399241324352)>', '<ExcThread(monitor, started 140398756345600)>']
[2025-07-27 00:39:35] 2025-07-27 04:39:16,645 | INFO     | all workflow threads have been joined
[2025-07-27 00:39:35] 2025-07-27 04:39:16,645 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 00:39:35] 2025-07-27 04:39:16,645 | INFO     | traces error code: 0
[2025-07-27 00:39:35] 2025-07-27 04:39:16,646 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 00:39:35] 2025-07-27 04:39:35,492 | INFO     | PID=2770629 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 00:39:35] 2025-07-27 04:39:35,492 | INFO     | .. there are 12 such processes running
[2025-07-27 00:39:35] 2025-07-27 04:39:35,493 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 00:39:35] 2025-07-27 04:39:35,493 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 00:39:35] 2025-07-27 04:39:35,493 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 00:39:35] 2025-07-27 04:39:35,493 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 00:39:35] 2025-07-27 04:39:35,493 | INFO     | [monitor] control thread has ended
[2025-07-27 00:39:35] 2025-07-27 04:39:35,657 [wrapper] ==== pilot stdout END ====
[2025-07-27 00:39:35] 2025-07-27 04:39:35,660 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 00:39:35] 2025-07-27 04:39:35,664 [wrapper] pilotpid: 2770629
[2025-07-27 00:39:35] 2025-07-27 04:39:35,668 [wrapper] Pilot exit status: 0
[2025-07-27 00:39:35] 2025-07-27 04:39:35,685 [wrapper] pandaids: 6745735658
[2025-07-27 00:39:35] 2025-07-27 04:39:35,742 [wrapper] cleanup supervisor_pilot 2929100 2770630
[2025-07-27 00:39:35] 2025-07-27 04:39:35,745 [wrapper] Test setup, not cleaning
[2025-07-27 00:39:35] 2025-07-27 04:39:35,749 [wrapper] apfmon messages muted
[2025-07-27 00:39:35] 2025-07-27 04:39:35,753 [wrapper] ==== wrapper stdout END ====
[2025-07-27 00:39:35] 2025-07-27 04:39:35,757 [wrapper] ==== wrapper stderr END ====
[2025-07-27 00:39:35]  *** Error codes and diagnostics ***
[2025-07-27 00:39:35]     "exeErrorCode": 0,
[2025-07-27 00:39:35]     "exeErrorDiag": "",
[2025-07-27 00:39:35]     "pilotErrorCode": 0,
[2025-07-27 00:39:35]     "pilotErrorDiag": "",
[2025-07-27 00:39:35]  *** Listing of results directory ***
[2025-07-27 00:39:35] total 424840
[2025-07-27 00:39:35] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 16:42 pilot3.tar.gz
[2025-07-27 00:39:35] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 17:04 queuedata.json
[2025-07-27 00:39:35] -rwx------. 1 boincer umatlas     36292 Jul 26 17:04 runpilot2-wrapper.sh
[2025-07-27 00:39:35] -rw-r--r--. 1 boincer umatlas       100 Jul 26 23:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 00:39:35] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 23:22 run_atlas
[2025-07-27 00:39:35] -rw-r--r--. 1 boincer umatlas       105 Jul 26 23:22 job.xml
[2025-07-27 00:39:35] -rw-r--r--. 2 boincer umatlas 230588281 Jul 26 23:22 EVNT.45743347._002544.pool.root.1
[2025-07-27 00:39:35] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 23:22 start_atlas.sh
[2025-07-27 00:39:35] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 23:22 shared
[2025-07-27 00:39:35] -rw-r--r--. 2 boincer umatlas    542891 Jul 26 23:22 input.tar.gz
[2025-07-27 00:39:35] -rw-r--r--. 1 boincer umatlas         0 Jul 26 23:22 boinc_lockfile
[2025-07-27 00:39:35] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 23:22 pandaJob.out
[2025-07-27 00:39:35] -rw-------. 1 boincer umatlas    980125 Jul 26 23:22 agis_schedconf.cvmfs.json
[2025-07-27 00:39:35] -rw-------. 1 boincer umatlas   1593052 Jul 26 23:22 agis_ddmendpoints.agis.ALL.json
[2025-07-27 00:39:35] drwx------. 4 boincer umatlas      4096 Jul 26 23:22 pilot3
[2025-07-27 00:39:35] -rw-r--r--. 1 boincer umatlas      6841 Jul 27 00:36 init_data.xml
[2025-07-27 00:39:35] -rw-------. 1 boincer umatlas 198935816 Jul 27 00:38 HITS.45743349._044372.pool.root.1
[2025-07-27 00:39:35] -rw-r--r--. 1 boincer umatlas       529 Jul 27 00:38 boinc_task_state.xml
[2025-07-27 00:39:35] -rw-------. 1 boincer umatlas      1036 Jul 27 00:38 memory_monitor_summary.json
[2025-07-27 00:39:35] -rw-------. 1 boincer umatlas    365581 Jul 27 00:38 log.45743349._044372.job.log.tgz.1
[2025-07-27 00:39:35] -rw-------. 1 boincer umatlas      7825 Jul 27 00:39 heartbeat.json
[2025-07-27 00:39:35] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 00:39 boinc_mmap_file
[2025-07-27 00:39:35] -rw-r--r--. 1 boincer umatlas        27 Jul 27 00:39 wrapper_checkpoint.txt
[2025-07-27 00:39:35] -rw-------. 1 boincer umatlas       823 Jul 27 00:39 pilotlog.txt
[2025-07-27 00:39:35] -rw-------. 1 boincer umatlas        95 Jul 27 00:39 pilot_heartbeat.json
[2025-07-27 00:39:35] -rw-------. 1 boincer umatlas    451344 Jul 27 00:39 log.45743349._044372.job.log.1
[2025-07-27 00:39:35] -rw-------. 1 boincer umatlas       357 Jul 27 00:39 output.list
[2025-07-27 00:39:35] -rw-r--r--. 1 boincer umatlas       620 Jul 27 00:39 runtime_log
[2025-07-27 00:39:35] -rw-------. 1 boincer umatlas    839680 Jul 27 00:39 result.tar.gz
[2025-07-27 00:39:35] -rw-------. 1 boincer umatlas       655 Jul 27 00:39 V5ZKDmTF1z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmO8SLDmd3SfPo.diag
[2025-07-27 00:39:35] -rw-r--r--. 1 boincer umatlas      8672 Jul 27 00:39 runtime_log.err
[2025-07-27 00:39:35] -rw-r--r--. 1 boincer umatlas     22145 Jul 27 00:39 stderr.txt
[2025-07-27 00:39:35] HITS file was successfully produced:
[2025-07-27 00:39:35] -rw-------. 1 boincer umatlas 198935816 Jul 27 00:38 shared/HITS.pool.root.1
[2025-07-27 00:39:35]  *** Contents of shared directory: ***
[2025-07-27 00:39:35] total 420832
[2025-07-27 00:39:35] -rw-r--r--. 2 boincer umatlas 230588281 Jul 26 23:22 ATLAS.root_0
[2025-07-27 00:39:35] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 23:22 start_atlas.sh
[2025-07-27 00:39:35] -rw-r--r--. 2 boincer umatlas    542891 Jul 26 23:22 input.tar.gz
[2025-07-27 00:39:35] -rw-------. 1 boincer umatlas 198935816 Jul 27 00:38 HITS.pool.root.1
[2025-07-27 00:39:35] -rw-------. 1 boincer umatlas    839680 Jul 27 00:39 result.tar.gz
00:39:36 (2766222): run_atlas exited; CPU time 46285.700468
00:39:36 (2766222): called boinc_finish(0)

</stderr_txt>
]]>

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