Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:05:37 (59247): wrapper (7.7.26015): starting
22:05:37 (59247): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 22:05:37] Arguments: --nthreads 8
[2025-07-26 22:05:37] Threads: 8
[2025-07-26 22:05:37] Checking for CVMFS
[2025-07-26 22:05:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 22:05:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 22:05:37] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 22:05:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 22:05:38] 2.13.1.0 2445429 3710 94248 148795 1 188 34725688 40960001 12962 16776704 0 59290417 99.999 130716 60460 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 22:05:38] CVMFS is ok
[2025-07-26 22:05:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 22:05:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 22:05:38] Further information can be found at the LHC@home message board.
[2025-07-26 22:05:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 22:05:38] Checking for apptainer binary...
[2025-07-26 22:05:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 22:05:38] Running /usr/bin/apptainer --version
[2025-07-26 22:05:38] apptainer version 1.4.1-1.el9
[2025-07-26 22:05:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 22:05:38] c-208-40.aglt2.org
[2025-07-26 22:05:38] apptainer works
[2025-07-26 22:05:38] Set ATHENA_PROC_NUMBER=8
[2025-07-26 22:05:38] Set ATHENA_CORE_NUMBER=8
[2025-07-26 22:05:38] Starting ATLAS job with PandaID=6745619961
[2025-07-26 22:05:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 23:03:26]  *** The last 200 lines of the pilot log: ***
[2025-07-26 23:03:26]  lfn=log.45743349._044213.job.log.tgz.1
[2025-07-26 23:03:26]  mtime=0
[2025-07-26 23:03:26]  protocol_id=None
[2025-07-26 23:03:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 23:03:26]  replicas=None
[2025-07-26 23:03:26]  scope=mc23_13p6TeV
[2025-07-26 23:03:26]  status=None
[2025-07-26 23:03:26]  status_code=0
[2025-07-26 23:03:26]  storage_token=
[2025-07-26 23:03:26]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6745619961/log.45743349._044213.job.log.tgz.1
[2025-07-26 23:03:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/86/ad/log.45743349._044213.job.log.tgz.1
[2025-07-26 23:03:26]  workdir=None
[2025-07-26 23:03:26] ]
[2025-07-26 23:03:26] 2025-07-27 03:02:45,666 | INFO     | transferring file log.45743349._044213.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6745619961/log.45743349._044213.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 23:03:26] 2025-07-27 03:02:45,666 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6745619961/log.45743349._044213.job.log.tgz.1 /tmp/boinchome/slots/2/log.45743349._044213.job
[2025-07-26 23:03:26] 2025-07-27 03:02:45,687 | INFO     | adding to output.list: log.45743349._044213.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/86/ad/log.45743349._044213.job.log.tg
[2025-07-26 23:03:26] 2025-07-27 03:02:45,687 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 23:03:26] 2025-07-27 03:02:45,688 | INFO     | summary of transferred files:
[2025-07-26 23:03:26] 2025-07-27 03:02:45,688 | INFO     |  -- lfn=log.45743349._044213.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 23:03:26] 2025-07-27 03:02:45,688 | INFO     | stage-out finished correctly
[2025-07-26 23:03:26] 2025-07-27 03:02:47,394 | INFO     | monitor loop #253: job 0:6745619961 is in state 'finished'
[2025-07-26 23:03:26] 2025-07-27 03:02:47,394 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 23:03:26] 2025-07-27 03:02:47,980 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 23:03:26] 2025-07-27 03:02:49,897 | INFO     | monitor loop #254: job 0:6745619961 is in state 'finished'
[2025-07-26 23:03:26] 2025-07-27 03:02:49,897 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 23:03:26] 2025-07-27 03:02:50,839 | INFO     | job 6745619961 has state=finished
[2025-07-26 23:03:26] 2025-07-27 03:02:50,840 | INFO     | preparing for final server update for job 6745619961 in state='finished'
[2025-07-26 23:03:26] 2025-07-27 03:02:50,841 | INFO     | this job has now completed (state=finished)
[2025-07-26 23:03:26] 2025-07-27 03:02:50,841 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 23:03:26] 2025-07-27 03:02:50,841 | INFO     | log transfer has been attempted: DONE
[2025-07-26 23:03:26] 2025-07-27 03:02:50,841 | INFO     | job 6745619961 has finished - writing final server update
[2025-07-26 23:03:26] 2025-07-27 03:02:50,841 | INFO     | total number of processed events: 400 (read)
[2025-07-26 23:03:26] 2025-07-27 03:02:50,842 | INFO     | executing command: lscpu
[2025-07-26 23:03:26] 2025-07-27 03:02:50,895 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 23:03:26] 2025-07-27 03:02:52,400 | INFO     | monitor loop #255: job 0:6745619961 is in state 'finished'
[2025-07-26 23:03:26] 2025-07-27 03:02:52,401 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 23:03:26] 2025-07-27 03:02:54,360 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 23:03:26] 2025-07-27 03:02:54,365 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3743.769640625
[2025-07-26 23:03:26] 2025-07-27 03:02:54,379 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6745619961/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 23:03:26] 2025-07-27 03:02:54,379 | INFO     | extracted standard info from prmon json
[2025-07-26 23:03:26] 2025-07-27 03:02:54,379 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 23:03:26] 2025-07-27 03:02:54,379 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 23:03:26] 2025-07-27 03:02:54,380 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 23:03:26] 2025-07-27 03:02:54,380 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 23:03:26] 2025-07-27 03:02:54,381 | INFO     | fitting pss+swap vs Time
[2025-07-26 23:03:26] 2025-07-27 03:02:54,381 | INFO     | sum of square deviations: 36465800.0
[2025-07-26 23:03:26] 2025-07-27 03:02:54,381 | INFO     | sum of deviations: 421265512.0
[2025-07-26 23:03:26] 2025-07-27 03:02:54,381 | INFO     | mean x: 1753583740.0
[2025-07-26 23:03:26] 2025-07-27 03:02:54,381 | INFO     | mean y: 2514785.102040816
[2025-07-26 23:03:26] 2025-07-27 03:02:54,381 | INFO     | -- intersect: -20255490032.17812
[2025-07-26 23:03:26] 2025-07-27 03:02:54,381 | INFO     | intersect: -20255490032.17812
[2025-07-26 23:03:26] 2025-07-27 03:02:54,381 | INFO     | chi2: 0.00034122801916483563
[2025-07-26 23:03:26] 2025-07-27 03:02:54,382 | INFO     | -- intersect: -20255490032.17812
[2025-07-26 23:03:26] 2025-07-27 03:02:54,382 | INFO     | current memory leak: 11.55 B/s (using 49 data points, chi2=0.00)
[2025-07-26 23:03:26] 2025-07-27 03:02:54,382 | INFO     | could have reported an average CPU frequency of 3743 MHz (5 samples)
[2025-07-26 23:03:26] 2025-07-27 03:02:54,382 | INFO     | ..............................
[2025-07-26 23:03:26] 2025-07-27 03:02:54,382 | INFO     | . Timing measurements:
[2025-07-26 23:03:26] 2025-07-27 03:02:54,382 | INFO     | . get job = 0 s
[2025-07-26 23:03:26] 2025-07-27 03:02:54,382 | INFO     | . initial setup = 2 s
[2025-07-26 23:03:26] 2025-07-27 03:02:54,382 | INFO     | . payload setup = 5 s
[2025-07-26 23:03:26] 2025-07-27 03:02:54,382 | INFO     | . stage-in = 0 s
[2025-07-26 23:03:26] 2025-07-27 03:02:54,382 | INFO     | . payload execution = 3394 s
[2025-07-26 23:03:26] 2025-07-27 03:02:54,382 | INFO     | . stage-out = 0 s
[2025-07-26 23:03:26] 2025-07-27 03:02:54,382 | INFO     | . log creation = 0 s
[2025-07-26 23:03:26] 2025-07-27 03:02:54,382 | INFO     | ..............................
[2025-07-26 23:03:26] 2025-07-27 03:02:54,442 | INFO     | 
[2025-07-26 23:03:26] 2025-07-27 03:02:54,442 | INFO     | job summary report
[2025-07-26 23:03:26] 2025-07-27 03:02:54,442 | INFO     | --------------------------------------------------
[2025-07-26 23:03:26] 2025-07-27 03:02:54,442 | INFO     | PanDA job id: 6745619961
[2025-07-26 23:03:26] 2025-07-27 03:02:54,442 | INFO     | task id: 45743349
[2025-07-26 23:03:26] 2025-07-27 03:02:54,442 | INFO     | errors: (none)
[2025-07-26 23:03:26] 2025-07-27 03:02:54,442 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 23:03:26] 2025-07-27 03:02:54,442 | INFO     | pilot state: finished 
[2025-07-26 23:03:26] 2025-07-27 03:02:54,442 | INFO     | transexitcode: 0
[2025-07-26 23:03:26] 2025-07-27 03:02:54,442 | INFO     | exeerrorcode: 0
[2025-07-26 23:03:26] 2025-07-27 03:02:54,442 | INFO     | exeerrordiag: 
[2025-07-26 23:03:26] 2025-07-27 03:02:54,442 | INFO     | exitcode: 0
[2025-07-26 23:03:26] 2025-07-27 03:02:54,443 | INFO     | exitmsg: OK
[2025-07-26 23:03:26] 2025-07-27 03:02:54,443 | INFO     | cpuconsumptiontime: 25138 s
[2025-07-26 23:03:26] 2025-07-27 03:02:54,443 | INFO     | nevents: 400
[2025-07-26 23:03:26] 2025-07-27 03:02:54,443 | INFO     | neventsw: 0
[2025-07-26 23:03:26] 2025-07-27 03:02:54,443 | INFO     | pid: 80041
[2025-07-26 23:03:26] 2025-07-27 03:02:54,443 | INFO     | pgrp: 80041
[2025-07-26 23:03:26] 2025-07-27 03:02:54,443 | INFO     | corecount: 8
[2025-07-26 23:03:26] 2025-07-27 03:02:54,443 | INFO     | event service: False
[2025-07-26 23:03:26] 2025-07-27 03:02:54,443 | INFO     | sizes: {0: 2397417, 4: 2397679, 11: 2397707, 3403: 2423377, 3404: 2432375, 3406: 2432431, 3413: 2432785}
[2025-07-26 23:03:26] 2025-07-27 03:02:54,443 | INFO     | --------------------------------------------------
[2025-07-26 23:03:26] 2025-07-27 03:02:54,443 | INFO     | 
[2025-07-26 23:03:26] 2025-07-27 03:02:54,443 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-26 23:03:26] 2025-07-27 03:02:54,461 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 23:03:26] 2025-07-27 03:02:54,461 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 23:03:26] 2025-07-27 03:02:54,461 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 23:03:26] 2025-07-27 03:02:54,461 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 23:03:26] 2025-07-27 03:02:54,461 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 23:03:26] 2025-07-27 03:02:54,461 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 23:03:26] 2025-07-27 03:02:54,461 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 23:03:26] 2025-07-27 03:02:54,461 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 23:03:26] 2025-07-27 03:02:54,461 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 23:03:26] 2025-07-27 03:02:54,461 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 23:03:26] 2025-07-27 03:02:54,461 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 23:03:26] 2025-07-27 03:02:54,461 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 23:03:26] 2025-07-27 03:02:54,461 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 23:03:26] 2025-07-27 03:02:54,462 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 23:03:26] 2025-07-27 03:02:54,462 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 23:03:26] 2025-07-27 03:02:54,462 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 23:03:26] 2025-07-27 03:02:54,462 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 23:03:26] 2025-07-27 03:02:54,462 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 23:03:26] 2025-07-27 03:02:54,462 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 23:03:26] 2025-07-27 03:02:54,462 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 23:03:26] 2025-07-27 03:02:54,462 | INFO     | job 6745619961 has completed (purged errors)
[2025-07-26 23:03:26] 2025-07-27 03:02:54,462 | INFO     | overall cleanup function is called
[2025-07-26 23:03:26] 2025-07-27 03:02:55,470 | INFO     | --- collectZombieJob: --- 10, [80041]
[2025-07-26 23:03:26] 2025-07-27 03:02:55,470 | INFO     | zombie collector waiting for pid 80041
[2025-07-26 23:03:26] 2025-07-27 03:02:55,470 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 23:03:26] 2025-07-27 03:02:55,470 | INFO     | collected zombie processes
[2025-07-26 23:03:26] 2025-07-27 03:02:55,470 | INFO     | will attempt to kill all subprocesses of pid=80041
[2025-07-26 23:03:26] 2025-07-27 03:02:55,816 | INFO     | process IDs to be killed: [80041] (in reverse order)
[2025-07-26 23:03:26] 2025-07-27 03:02:55,931 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 23:03:26] 2025-07-27 03:02:55,931 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 23:03:26] 2025-07-27 03:02:55,945 | INFO     | did not find any defunct processes belonging to 80041
[2025-07-26 23:03:26] 2025-07-27 03:02:55,958 | INFO     | did not find any defunct processes belonging to 80041
[2025-07-26 23:03:26] 2025-07-27 03:02:55,958 | INFO     | ready for new job
[2025-07-26 23:03:26] 2025-07-27 03:02:55,958 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 23:03:26] 2025-07-27 03:02:55,959 | INFO     | ***************************************
[2025-07-26 23:03:26] 2025-07-27 03:02:55,960 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 23:03:26] 2025-07-27 03:02:55,960 | INFO     | ***************************************
[2025-07-26 23:03:26] 2025-07-27 03:02:55,960 | INFO     | 
[2025-07-26 23:03:26] 2025-07-27 03:02:55,964 | INFO     | architecture information:
[2025-07-26 23:03:26] 2025-07-27 03:02:55,964 | INFO     | executing command: cat /etc/os-release
[2025-07-26 23:03:26] 2025-07-27 03:02:55,977 | INFO     | cat /etc/os-release:
[2025-07-26 23:03:26] NAME="CentOS Linux"
[2025-07-26 23:03:26] VERSION="7 (Core)"
[2025-07-26 23:03:26] ID="centos"
[2025-07-26 23:03:26] ID_LIKE="rhel fedora"
[2025-07-26 23:03:26] VERSION_ID="7"
[2025-07-26 23:03:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 23:03:26] ANSI_COLOR="0;31"
[2025-07-26 23:03:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 23:03:26] HOME_URL="https://www.centos.org/"
[2025-07-26 23:03:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 23:03:26] 
[2025-07-26 23:03:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 23:03:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 23:03:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 23:03:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 23:03:26] 
[2025-07-26 23:03:26] 2025-07-27 03:02:55,978 | INFO     | ***************************************
[2025-07-26 23:03:26] 2025-07-27 03:02:56,481 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-26 23:03:26] 2025-07-27 03:02:56,494 | INFO     | sufficient remaining disk space (165160157184 B)
[2025-07-26 23:03:26] 2025-07-27 03:02:56,494 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 23:03:26] 2025-07-27 03:02:56,494 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 23:03:26] 2025-07-27 03:02:56,494 | INFO     | update_server=False
[2025-07-26 23:03:26] 2025-07-27 03:02:56,494 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 23:03:26] 2025-07-27 03:02:56,495 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 23:03:26] 2025-07-27 03:02:56,495 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:03:26] 2025-07-27 03:02:56,495 | INFO     | aborting loop
[2025-07-26 23:03:26] 2025-07-27 03:02:56,578 | INFO     | all data control threads have been joined
[2025-07-26 23:03:26] 2025-07-27 03:02:56,711 | INFO     | all payload control threads have been joined
[2025-07-26 23:03:26] 2025-07-27 03:02:57,179 | INFO     | all job control threads have been joined
[2025-07-26 23:03:26] 2025-07-27 03:02:57,496 | INFO     | [job] retrieve thread has finished
[2025-07-26 23:03:26] 2025-07-27 03:02:57,501 | INFO     | [job] job monitor thread has finished
[2025-07-26 23:03:26] 2025-07-27 03:02:57,582 | INFO     | [data] control thread has finished
[2025-07-26 23:03:26] 2025-07-27 03:02:57,716 | INFO     | [payload] control thread has finished
[2025-07-26 23:03:26] 2025-07-27 03:02:57,823 | INFO     | [job] validate thread has finished
[2025-07-26 23:03:26] 2025-07-27 03:02:57,911 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 23:03:26] 2025-07-27 03:02:57,998 | INFO     | [payload] failed_post thread has finished
[2025-07-26 23:03:26] 2025-07-27 03:02:58,091 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 23:03:26] 2025-07-27 03:02:58,148 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 23:03:26] 2025-07-27 03:02:58,184 | INFO     | [job] control thread has finished
[2025-07-26 23:03:26] 2025-07-27 03:02:58,500 | INFO     | [data] copytool_out thread has finished
[2025-07-26 23:03:26] 2025-07-27 03:02:58,522 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 23:03:26] 2025-07-27 03:02:58,542 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 23:03:26] 2025-07-27 03:02:58,861 | INFO     | [data] copytool_in thread has finished
[2025-07-26 23:03:26] 2025-07-27 03:02:58,978 | INFO     | [payload] validate_post thread has finished
[2025-07-26 23:03:26] 2025-07-27 03:02:59,450 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:03:26] 2025-07-27 03:03:00,455 | INFO     | [job] queue monitor thread has finished
[2025-07-26 23:03:26] 2025-07-27 03:03:02,548 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 23:03:26] 2025-07-27 03:03:03,511 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139967773099840)>', '<ExcThread(monitor, started 139966994700032)>']
[2025-07-26 23:03:26] 2025-07-27 03:03:08,533 | INFO     | all workflow threads have been joined
[2025-07-26 23:03:26] 2025-07-27 03:03:08,533 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 23:03:26] 2025-07-27 03:03:08,534 | INFO     | traces error code: 0
[2025-07-26 23:03:26] 2025-07-27 03:03:08,534 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 23:03:26] 2025-07-27 03:03:26,199 | INFO     | PID=65784 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 23:03:26] 2025-07-27 03:03:26,199 | INFO     | .. there are 16 such processes running
[2025-07-26 23:03:26] 2025-07-27 03:03:26,199 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 23:03:26] 2025-07-27 03:03:26,199 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 23:03:26] 2025-07-27 03:03:26,199 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 23:03:26] 2025-07-27 03:03:26,199 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 23:03:26] 2025-07-27 03:03:26,199 | CRITICAL | thread 'MainThread' is not alive
[2025-07-26 23:03:26] 2025-07-27 03:03:26,200 | INFO     | [monitor] control thread has ended
[2025-07-26 23:03:26] 2025-07-27 03:03:26,292 [wrapper] ==== pilot stdout END ====
[2025-07-26 23:03:26] 2025-07-27 03:03:26,295 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 23:03:26] 2025-07-27 03:03:26,297 [wrapper] pilotpid: 65784
[2025-07-26 23:03:26] 2025-07-27 03:03:26,300 [wrapper] Pilot exit status: 0
[2025-07-26 23:03:26] 2025-07-27 03:03:26,309 [wrapper] pandaids: 6745619961
[2025-07-26 23:03:26] 2025-07-27 03:03:26,392 [wrapper] cleanup supervisor_pilot  359045 65785
[2025-07-26 23:03:26] 2025-07-27 03:03:26,394 [wrapper] Test setup, not cleaning
[2025-07-26 23:03:26] 2025-07-27 03:03:26,397 [wrapper] apfmon messages muted
[2025-07-26 23:03:26] 2025-07-27 03:03:26,399 [wrapper] ==== wrapper stdout END ====
[2025-07-26 23:03:26] 2025-07-27 03:03:26,401 [wrapper] ==== wrapper stderr END ====
[2025-07-26 23:03:26]  *** Error codes and diagnostics ***
[2025-07-26 23:03:26]     "exeErrorCode": 0,
[2025-07-26 23:03:26]     "exeErrorDiag": "",
[2025-07-26 23:03:26]     "pilotErrorCode": 0,
[2025-07-26 23:03:26]     "pilotErrorDiag": "",
[2025-07-26 23:03:26]  *** Listing of results directory ***
[2025-07-26 23:03:26] total 357032
[2025-07-26 23:03:26] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 16:42 pilot3.tar.gz
[2025-07-26 23:03:26] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 16:46 queuedata.json
[2025-07-26 23:03:26] -rwx------. 1 boincer umatlas     36292 Jul 26 16:47 runpilot2-wrapper.sh
[2025-07-26 23:03:26] -rw-r--r--. 1 boincer umatlas       100 Jul 26 22:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 23:03:26] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 22:05 run_atlas
[2025-07-26 23:03:26] -rw-r--r--. 1 boincer umatlas       105 Jul 26 22:05 job.xml
[2025-07-26 23:03:26] -rw-r--r--. 2 boincer umatlas 148665911 Jul 26 22:05 EVNT.45743347._000128.pool.root.1
[2025-07-26 23:03:26] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 22:05 start_atlas.sh
[2025-07-26 23:03:26] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 22:05 shared
[2025-07-26 23:03:26] -rw-r--r--. 2 boincer umatlas    542890 Jul 26 22:05 input.tar.gz
[2025-07-26 23:03:26] -rw-r--r--. 1 boincer umatlas         0 Jul 26 22:05 boinc_lockfile
[2025-07-26 23:03:26] -rw-r--r--. 1 boincer umatlas      2559 Jul 26 22:05 pandaJob.out
[2025-07-26 23:03:26] -rw-------. 1 boincer umatlas    980125 Jul 26 22:05 agis_schedconf.cvmfs.json
[2025-07-26 23:03:26] -rw-------. 1 boincer umatlas   1593052 Jul 26 22:05 agis_ddmendpoints.agis.ALL.json
[2025-07-26 23:03:26] drwx------. 4 boincer umatlas      4096 Jul 26 22:05 pilot3
[2025-07-26 23:03:26] -rw-r--r--. 1 boincer umatlas      7172 Jul 26 22:58 init_data.xml
[2025-07-26 23:03:26] -rw-------. 1 boincer umatlas 211777327 Jul 26 23:02 HITS.45743349._044213.pool.root.1
[2025-07-26 23:03:26] -rw-r--r--. 1 boincer umatlas       529 Jul 26 23:02 boinc_task_state.xml
[2025-07-26 23:03:26] -rw-------. 1 boincer umatlas      1026 Jul 26 23:02 memory_monitor_summary.json
[2025-07-26 23:03:26] -rw-------. 1 boincer umatlas    291954 Jul 26 23:02 log.45743349._044213.job.log.tgz.1
[2025-07-26 23:03:26] -rw-------. 1 boincer umatlas        95 Jul 26 23:02 pilot_heartbeat.json
[2025-07-26 23:03:26] -rw-------. 1 boincer umatlas      7761 Jul 26 23:02 heartbeat.json
[2025-07-26 23:03:26] -rw-r--r--. 1 boincer umatlas        27 Jul 26 23:03 wrapper_checkpoint.txt
[2025-07-26 23:03:26] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 23:03 boinc_mmap_file
[2025-07-26 23:03:26] -rw-------. 1 boincer umatlas       891 Jul 26 23:03 pilotlog.txt
[2025-07-26 23:03:26] -rw-------. 1 boincer umatlas    348937 Jul 26 23:03 log.45743349._044213.job.log.1
[2025-07-26 23:03:26] -rw-------. 1 boincer umatlas       357 Jul 26 23:03 output.list
[2025-07-26 23:03:26] -rw-r--r--. 1 boincer umatlas       620 Jul 26 23:03 runtime_log
[2025-07-26 23:03:26] -rw-------. 1 boincer umatlas    655360 Jul 26 23:03 result.tar.gz
[2025-07-26 23:03:26] -rw-r--r--. 1 boincer umatlas      8660 Jul 26 23:03 runtime_log.err
[2025-07-26 23:03:26] -rw-------. 1 boincer umatlas       651 Jul 26 23:03 303LDmOz0z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmKR1KDmJWyBkn.diag
[2025-07-26 23:03:26] -rw-r--r--. 1 boincer umatlas     21623 Jul 26 23:03 stderr.txt
[2025-07-26 23:03:26] HITS file was successfully produced:
[2025-07-26 23:03:26] -rw-------. 1 boincer umatlas 211777327 Jul 26 23:02 shared/HITS.pool.root.1
[2025-07-26 23:03:26]  *** Contents of shared directory: ***
[2025-07-26 23:03:26] total 353196
[2025-07-26 23:03:26] -rw-r--r--. 2 boincer umatlas 148665911 Jul 26 22:05 ATLAS.root_0
[2025-07-26 23:03:26] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 22:05 start_atlas.sh
[2025-07-26 23:03:26] -rw-r--r--. 2 boincer umatlas    542890 Jul 26 22:05 input.tar.gz
[2025-07-26 23:03:26] -rw-------. 1 boincer umatlas 211777327 Jul 26 23:02 HITS.pool.root.1
[2025-07-26 23:03:26] -rw-------. 1 boincer umatlas    655360 Jul 26 23:03 result.tar.gz
23:03:28 (59247): run_atlas exited; CPU time 25224.673111
23:03:28 (59247): called boinc_finish(0)

</stderr_txt>
]]>

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