Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:35:14 (2236088): wrapper (7.7.26015): starting
15:35:14 (2236088): wrapper: running run_atlas (--nthreads 3)
[2025-07-27 15:35:14] Arguments: --nthreads 3
[2025-07-27 15:35:14] Threads: 3
[2025-07-27 15:35:14] Checking for CVMFS
[2025-07-27 15:35:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 15:35:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 15:35:14] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 15:35:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 15:35:14] 2.9.2.0 1042844 3831 82300 148813 1 57 20282627 36864001 0 130560 0 2890248 99.991 135137 2266 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-27 15:35:14] CVMFS is ok
[2025-07-27 15:35:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 15:35:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 15:35:14] Further information can be found at the LHC@home message board.
[2025-07-27 15:35:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 15:35:14] Checking for apptainer binary...
[2025-07-27 15:35:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 15:35:14] Running /usr/bin/apptainer --version
[2025-07-27 15:35:14] apptainer version 1.4.1-1.1
[2025-07-27 15:35:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 15:35:14] legendA163
[2025-07-27 15:35:14] apptainer works
[2025-07-27 15:35:14] Set ATHENA_PROC_NUMBER=3
[2025-07-27 15:35:14] Set ATHENA_CORE_NUMBER=3
[2025-07-27 15:35:14] Starting ATLAS job with PandaID=6745735603
[2025-07-27 15:35:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 17:12:28]  *** The last 200 lines of the pilot log: ***
[2025-07-27 17:12:28]  is_tar=False
[2025-07-27 17:12:28]  lfn=log.45743349._044317.job.log.tgz.1
[2025-07-27 17:12:28]  mtime=0
[2025-07-27 17:12:28]  protocol_id=None
[2025-07-27 17:12:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 17:12:28]  replicas=None
[2025-07-27 17:12:28]  scope=mc23_13p6TeV
[2025-07-27 17:12:28]  status=None
[2025-07-27 17:12:28]  status_code=0
[2025-07-27 17:12:28]  storage_token=
[2025-07-27 17:12:28]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6745735603/log.45743349._044317.job.log.tgz.1
[2025-07-27 17:12:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0b/2c/log.45743349._044317.job.log.tgz.1
[2025-07-27 17:12:28]  workdir=None
[2025-07-27 17:12:28] ]
[2025-07-27 17:12:28] 2025-07-27 15:11:52,984 | INFO     | transferring file log.45743349._044317.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6745735603/log.45743349._044317.job.log.tgz.1 to /local/data/boinc/
[2025-07-27 17:12:28] 2025-07-27 15:11:52,984 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6745735603/log.45743349._044317.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0443
[2025-07-27 17:12:28] 2025-07-27 15:11:52,998 | INFO     | adding to output.list: log.45743349._044317.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0b/2c/log.45743349._044317.job.log.tg
[2025-07-27 17:12:28] 2025-07-27 15:11:52,999 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 17:12:28] 2025-07-27 15:11:52,999 | INFO     | summary of transferred files:
[2025-07-27 17:12:28] 2025-07-27 15:11:52,999 | INFO     |  -- lfn=log.45743349._044317.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 17:12:28] 2025-07-27 15:11:52,999 | INFO     | stage-out finished correctly
[2025-07-27 17:12:28] 2025-07-27 15:11:53,029 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 17:12:28] 2025-07-27 15:11:53,429 | INFO     | 5794s have passed since pilot start - server update state is 'RUNNING'
[2025-07-27 17:12:28] 2025-07-27 15:11:53,812 | INFO     | job 6745735603 has state=finished
[2025-07-27 17:12:28] 2025-07-27 15:11:53,812 | INFO     | preparing for final server update for job 6745735603 in state='finished'
[2025-07-27 17:12:28] 2025-07-27 15:11:53,813 | INFO     | this job has now completed (state=finished)
[2025-07-27 17:12:28] 2025-07-27 15:11:53,813 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 17:12:28] 2025-07-27 15:11:53,813 | INFO     | log transfer has been attempted: DONE
[2025-07-27 17:12:28] 2025-07-27 15:11:53,813 | INFO     | job 6745735603 has finished - writing final server update
[2025-07-27 17:12:28] 2025-07-27 15:11:53,813 | INFO     | total number of processed events: 400 (read)
[2025-07-27 17:12:28] 2025-07-27 15:11:53,814 | INFO     | executing command: lscpu
[2025-07-27 17:12:28] 2025-07-27 15:11:53,830 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 17:12:28] 2025-07-27 15:11:56,224 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 17:12:28] 2025-07-27 15:11:56,225 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3646.927
[2025-07-27 17:12:28] 2025-07-27 15:11:56,226 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745735603/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 17:12:28] 2025-07-27 15:11:56,226 | INFO     | extracted standard info from prmon json
[2025-07-27 17:12:28] 2025-07-27 15:11:56,226 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 17:12:28] 2025-07-27 15:11:56,226 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 17:12:28] 2025-07-27 15:11:56,227 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 17:12:28] 2025-07-27 15:11:56,227 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 17:12:28] 2025-07-27 15:11:56,227 | INFO     | fitting pss+swap vs Time
[2025-07-27 17:12:28] 2025-07-27 15:11:56,227 | INFO     | sum of square deviations: 211285822.0
[2025-07-27 17:12:28] 2025-07-27 15:11:56,228 | INFO     | sum of deviations: -13327974881.500002
[2025-07-27 17:12:28] 2025-07-27 15:11:56,228 | INFO     | mean x: 1753626298.5
[2025-07-27 17:12:28] 2025-07-27 15:11:56,228 | INFO     | mean y: 2441455.852272727
[2025-07-27 17:12:28] 2025-07-27 15:11:56,228 | INFO     | -- intersect: 110621729757.86539
[2025-07-27 17:12:28] 2025-07-27 15:11:56,228 | INFO     | intersect: 110621729757.86539
[2025-07-27 17:12:28] 2025-07-27 15:11:56,228 | INFO     | chi2: 0.13054143078030214
[2025-07-27 17:12:28] 2025-07-27 15:11:56,228 | INFO     | -- intersect: 110621729757.86539
[2025-07-27 17:12:28] 2025-07-27 15:11:56,228 | INFO     | current memory leak: -63.08 B/s (using 88 data points, chi2=0.13)
[2025-07-27 17:12:28] 2025-07-27 15:11:56,228 | INFO     | could have reported an average CPU frequency of 3858 MHz (7 samples)
[2025-07-27 17:12:28] 2025-07-27 15:11:56,228 | INFO     | ..............................
[2025-07-27 17:12:28] 2025-07-27 15:11:56,228 | INFO     | . Timing measurements:
[2025-07-27 17:12:28] 2025-07-27 15:11:56,228 | INFO     | . get job = 0 s
[2025-07-27 17:12:28] 2025-07-27 15:11:56,228 | INFO     | . initial setup = 1 s
[2025-07-27 17:12:28] 2025-07-27 15:11:56,228 | INFO     | . payload setup = 3 s
[2025-07-27 17:12:28] 2025-07-27 15:11:56,228 | INFO     | . stage-in = 0 s
[2025-07-27 17:12:28] 2025-07-27 15:11:56,228 | INFO     | . payload execution = 5772 s
[2025-07-27 17:12:28] 2025-07-27 15:11:56,228 | INFO     | . stage-out = 0 s
[2025-07-27 17:12:28] 2025-07-27 15:11:56,228 | INFO     | . log creation = 0 s
[2025-07-27 17:12:28] 2025-07-27 15:11:56,228 | INFO     | ..............................
[2025-07-27 17:12:28] 2025-07-27 15:11:56,259 | INFO     | 
[2025-07-27 17:12:28] 2025-07-27 15:11:56,259 | INFO     | job summary report
[2025-07-27 17:12:28] 2025-07-27 15:11:56,259 | INFO     | --------------------------------------------------
[2025-07-27 17:12:28] 2025-07-27 15:11:56,259 | INFO     | PanDA job id: 6745735603
[2025-07-27 17:12:28] 2025-07-27 15:11:56,259 | INFO     | task id: 45743349
[2025-07-27 17:12:28] 2025-07-27 15:11:56,259 | INFO     | errors: (none)
[2025-07-27 17:12:28] 2025-07-27 15:11:56,259 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 17:12:28] 2025-07-27 15:11:56,259 | INFO     | pilot state: finished 
[2025-07-27 17:12:28] 2025-07-27 15:11:56,259 | INFO     | transexitcode: 0
[2025-07-27 17:12:28] 2025-07-27 15:11:56,259 | INFO     | exeerrorcode: 0
[2025-07-27 17:12:28] 2025-07-27 15:11:56,259 | INFO     | exeerrordiag: 
[2025-07-27 17:12:28] 2025-07-27 15:11:56,259 | INFO     | exitcode: 0
[2025-07-27 17:12:28] 2025-07-27 15:11:56,259 | INFO     | exitmsg: OK
[2025-07-27 17:12:28] 2025-07-27 15:11:56,259 | INFO     | cpuconsumptiontime: 16653 s
[2025-07-27 17:12:28] 2025-07-27 15:11:56,259 | INFO     | nevents: 400
[2025-07-27 17:12:28] 2025-07-27 15:11:56,259 | INFO     | neventsw: 0
[2025-07-27 17:12:28] 2025-07-27 15:11:56,259 | INFO     | pid: 2246225
[2025-07-27 17:12:28] 2025-07-27 15:11:56,259 | INFO     | pgrp: 2246225
[2025-07-27 17:12:28] 2025-07-27 15:11:56,259 | INFO     | corecount: 3
[2025-07-27 17:12:28] 2025-07-27 15:11:56,259 | INFO     | event service: False
[2025-07-27 17:12:28] 2025-07-27 15:11:56,260 | INFO     | sizes: {0: 2397307, 1: 2397506, 3: 2397768, 11: 2397796, 5779: 2433665, 5783: 2433803}
[2025-07-27 17:12:28] 2025-07-27 15:11:56,260 | INFO     | --------------------------------------------------
[2025-07-27 17:12:28] 2025-07-27 15:11:56,260 | INFO     | 
[2025-07-27 17:12:28] 2025-07-27 15:11:56,260 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-27 17:12:28] 2025-07-27 15:11:56,272 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 17:12:28] 2025-07-27 15:11:56,273 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 17:12:28] 2025-07-27 15:11:56,273 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 17:12:28] 2025-07-27 15:11:56,273 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 17:12:28] 2025-07-27 15:11:56,273 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 17:12:28] 2025-07-27 15:11:56,273 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 17:12:28] 2025-07-27 15:11:56,273 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 17:12:28] 2025-07-27 15:11:56,273 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 17:12:28] 2025-07-27 15:11:56,273 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 17:12:28] 2025-07-27 15:11:56,273 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 17:12:28] 2025-07-27 15:11:56,273 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 17:12:28] 2025-07-27 15:11:56,273 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 17:12:28] 2025-07-27 15:11:56,273 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 17:12:28] 2025-07-27 15:11:56,273 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 17:12:28] 2025-07-27 15:11:56,273 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 17:12:28] 2025-07-27 15:11:56,273 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 17:12:28] 2025-07-27 15:11:56,273 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 17:12:28] 2025-07-27 15:11:56,273 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 17:12:28] 2025-07-27 15:11:56,273 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 17:12:28] 2025-07-27 15:11:56,273 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 17:12:28] 2025-07-27 15:11:56,273 | INFO     | job 6745735603 has completed (purged errors)
[2025-07-27 17:12:28] 2025-07-27 15:11:56,273 | INFO     | overall cleanup function is called
[2025-07-27 17:12:28] 2025-07-27 15:11:56,508 | INFO     | PID=2239730 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 17:12:28] 2025-07-27 15:11:56,979 | WARNING  | process 2246225 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 17:12:28] 2025-07-27 15:11:57,014 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 17:12:28] 2025-07-27 15:11:57,060 | INFO     | number of running child processes to parent process 2246225: 1
[2025-07-27 17:12:28] 2025-07-27 15:11:57,060 | INFO     | maximum number of monitored processes: 6
[2025-07-27 17:12:28] 2025-07-27 15:11:57,060 | INFO     | aborting job monitoring since job object (job id=6745735603) has expired
[2025-07-27 17:12:28] 2025-07-27 15:11:57,280 | INFO     | --- collectZombieJob: --- 10, [2246225]
[2025-07-27 17:12:28] 2025-07-27 15:11:57,280 | INFO     | zombie collector waiting for pid 2246225
[2025-07-27 17:12:28] 2025-07-27 15:11:57,280 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 17:12:28] 2025-07-27 15:11:57,280 | INFO     | collected zombie processes
[2025-07-27 17:12:28] 2025-07-27 15:11:57,280 | INFO     | will attempt to kill all subprocesses of pid=2246225
[2025-07-27 17:12:28] 2025-07-27 15:11:57,331 | INFO     | process IDs to be killed: [2246225] (in reverse order)
[2025-07-27 17:12:28] 2025-07-27 15:11:57,358 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 17:12:28] 2025-07-27 15:11:57,359 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 17:12:28] 2025-07-27 15:11:57,360 | INFO     | did not find any defunct processes belonging to 2246225
[2025-07-27 17:12:28] 2025-07-27 15:11:57,361 | INFO     | did not find any defunct processes belonging to 2246225
[2025-07-27 17:12:28] 2025-07-27 15:11:57,362 | INFO     | ready for new job
[2025-07-27 17:12:28] 2025-07-27 15:11:57,362 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 17:12:28] 2025-07-27 15:11:57,362 | INFO     | ***************************************
[2025-07-27 17:12:28] 2025-07-27 15:11:57,362 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 17:12:28] 2025-07-27 15:11:57,362 | INFO     | ***************************************
[2025-07-27 17:12:28] 2025-07-27 15:11:57,362 | INFO     | 
[2025-07-27 17:12:28] 2025-07-27 15:11:57,363 | INFO     | architecture information:
[2025-07-27 17:12:28] 2025-07-27 15:11:57,363 | INFO     | executing command: cat /etc/os-release
[2025-07-27 17:12:28] 2025-07-27 15:11:57,372 | INFO     | cat /etc/os-release:
[2025-07-27 17:12:28] NAME="CentOS Linux"
[2025-07-27 17:12:28] VERSION="7 (Core)"
[2025-07-27 17:12:28] ID="centos"
[2025-07-27 17:12:28] ID_LIKE="rhel fedora"
[2025-07-27 17:12:28] VERSION_ID="7"
[2025-07-27 17:12:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 17:12:28] ANSI_COLOR="0;31"
[2025-07-27 17:12:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 17:12:28] HOME_URL="https://www.centos.org/"
[2025-07-27 17:12:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 17:12:28] 
[2025-07-27 17:12:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 17:12:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 17:12:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 17:12:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 17:12:28] 
[2025-07-27 17:12:28] 2025-07-27 15:11:57,372 | INFO     | ***************************************
[2025-07-27 17:12:28] 2025-07-27 15:11:57,875 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-27 17:12:28] 2025-07-27 15:11:57,888 | INFO     | sufficient remaining disk space (380202123264 B)
[2025-07-27 17:12:28] 2025-07-27 15:11:57,889 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 17:12:28] 2025-07-27 15:11:57,889 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 17:12:28] 2025-07-27 15:11:57,889 | INFO     | update_server=False
[2025-07-27 17:12:28] 2025-07-27 15:11:57,889 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 17:12:28] 2025-07-27 15:11:57,889 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 17:12:28] 2025-07-27 15:11:57,889 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 17:12:28] 2025-07-27 15:11:57,889 | INFO     | will abort loop
[2025-07-27 17:12:28] 2025-07-27 15:11:57,893 | INFO     | all job control threads have been joined
[2025-07-27 17:12:28] 2025-07-27 15:11:58,366 | INFO     | all payload control threads have been joined
[2025-07-27 17:12:28] 2025-07-27 15:11:58,538 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 17:12:28] 2025-07-27 15:11:58,894 | INFO     | [job] queue monitor thread has finished
[2025-07-27 17:12:28] 2025-07-27 15:11:58,895 | INFO     | [job] control thread has finished
[2025-07-27 17:12:28] 2025-07-27 15:11:58,895 | INFO     | [job] job monitor thread has finished
[2025-07-27 17:12:28] 2025-07-27 15:11:58,895 | INFO     | [job] retrieve thread has finished
[2025-07-27 17:12:28] 2025-07-27 15:11:58,992 | INFO     | all data control threads have been joined
[2025-07-27 17:12:28] 2025-07-27 15:11:59,037 | INFO     | [payload] failed_post thread has finished
[2025-07-27 17:12:28] 2025-07-27 15:11:59,064 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 17:12:28] 2025-07-27 15:11:59,306 | INFO     | [data] copytool_in thread has finished
[2025-07-27 17:12:28] 2025-07-27 15:11:59,372 | INFO     | [payload] control thread has finished
[2025-07-27 17:12:28] 2025-07-27 15:11:59,688 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 17:12:28] 2025-07-27 15:11:59,708 | INFO     | [job] validate thread has finished
[2025-07-27 17:12:28] 2025-07-27 15:11:59,777 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 17:12:28] 2025-07-27 15:11:59,874 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 17:12:28] 2025-07-27 15:11:59,884 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 17:12:28] 2025-07-27 15:11:59,998 | INFO     | [data] control thread has finished
[2025-07-27 17:12:28] 2025-07-27 15:12:00,120 | INFO     | [payload] validate_post thread has finished
[2025-07-27 17:12:28] 2025-07-27 15:12:00,544 | INFO     | [data] copytool_out thread has finished
[2025-07-27 17:12:28] 2025-07-27 15:12:03,071 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 17:12:28] 2025-07-27 15:12:04,313 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140423628191552)>', '<ExcThread(monitor, started 140422999430912)>']
[2025-07-27 17:12:28] 2025-07-27 15:12:09,321 | INFO     | all workflow threads have been joined
[2025-07-27 17:12:28] 2025-07-27 15:12:09,321 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 17:12:28] 2025-07-27 15:12:09,321 | INFO     | traces error code: 0
[2025-07-27 17:12:28] 2025-07-27 15:12:09,321 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 17:12:28] 2025-07-27 15:12:28,648 | INFO     | PID=2239730 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 17:12:28] 2025-07-27 15:12:28,648 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 17:12:28] 2025-07-27 15:12:28,648 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 17:12:28] 2025-07-27 15:12:28,648 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 17:12:28] 2025-07-27 15:12:28,648 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 17:12:28] 2025-07-27 15:12:28,648 | INFO     | [monitor] control thread has ended
[2025-07-27 17:12:28] 2025-07-27 15:12:28,694 [wrapper] ==== pilot stdout END ====
[2025-07-27 17:12:28] 2025-07-27 15:12:28,696 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 17:12:28] 2025-07-27 15:12:28,699 [wrapper] pilotpid: 2239730
[2025-07-27 17:12:28] 2025-07-27 15:12:28,701 [wrapper] Pilot exit status: 0
[2025-07-27 17:12:28] 2025-07-27 15:12:28,709 [wrapper] pandaids: 6745735603
[2025-07-27 17:12:28] 2025-07-27 15:12:28,728 [wrapper] cleanup supervisor_pilot 2261350 2239731
[2025-07-27 17:12:28] 2025-07-27 15:12:28,730 [wrapper] Test setup, not cleaning
[2025-07-27 17:12:28] 2025-07-27 15:12:28,733 [wrapper] apfmon messages muted
[2025-07-27 17:12:28] 2025-07-27 15:12:28,735 [wrapper] ==== wrapper stdout END ====
[2025-07-27 17:12:28] 2025-07-27 15:12:28,738 [wrapper] ==== wrapper stderr END ====
[2025-07-27 17:12:28]  *** Error codes and diagnostics ***
[2025-07-27 17:12:28]     "exeErrorCode": 0,
[2025-07-27 17:12:28]     "exeErrorDiag": "",
[2025-07-27 17:12:28]     "pilotErrorCode": 0,
[2025-07-27 17:12:28]     "pilotErrorDiag": "",
[2025-07-27 17:12:28]  *** Listing of results directory ***
[2025-07-27 17:12:28] total 433432
[2025-07-27 17:12:28] -rw-r--r-- 1 boinc boinc    530466 Jul 26 22:42 pilot3.tar.gz
[2025-07-27 17:12:28] -rw-r--r-- 1 boinc boinc      5112 Jul 26 22:59 queuedata.json
[2025-07-27 17:12:28] -rwx------ 1 boinc boinc     36292 Jul 26 22:59 runpilot2-wrapper.sh
[2025-07-27 17:12:28] -rw-r--r-- 1 boinc boinc       100 Jul 27 15:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 17:12:28] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 15:35 run_atlas
[2025-07-27 17:12:28] -rw-r--r-- 1 boinc boinc       105 Jul 27 15:35 job.xml
[2025-07-27 17:12:28] -rw-r--r-- 2 boinc boinc 229382595 Jul 27 15:35 EVNT.45743347._002542.pool.root.1
[2025-07-27 17:12:28] drwxrwx--x 2 boinc boinc      4096 Jul 27 15:35 shared
[2025-07-27 17:12:28] -rw-r--r-- 2 boinc boinc    542901 Jul 27 15:35 input.tar.gz
[2025-07-27 17:12:28] -rw-r--r-- 2 boinc boinc     15095 Jul 27 15:35 start_atlas.sh
[2025-07-27 17:12:28] -rw-r--r-- 1 boinc boinc         0 Jul 27 15:35 boinc_setup_complete
[2025-07-27 17:12:28] -rw-r--r-- 1 boinc boinc      6452 Jul 27 15:35 init_data.xml
[2025-07-27 17:12:28] -rw-r--r-- 1 boinc boinc         0 Jul 27 15:35 boinc_lockfile
[2025-07-27 17:12:28] -rw-r--r-- 1 boinc boinc      2563 Jul 27 15:35 pandaJob.out
[2025-07-27 17:12:28] -rw------- 1 boinc boinc    980117 Jul 27 15:35 agis_schedconf.cvmfs.json
[2025-07-27 17:12:28] -rw------- 1 boinc boinc   1593052 Jul 27 15:35 agis_ddmendpoints.agis.ALL.json
[2025-07-27 17:12:28] drwx------ 4 boinc boinc      4096 Jul 27 15:35 pilot3
[2025-07-27 17:12:28] -rw------- 1 boinc boinc 208990354 Jul 27 17:11 HITS.45743349._044317.pool.root.1
[2025-07-27 17:12:28] -rw-r--r-- 1 boinc boinc       529 Jul 27 17:11 boinc_task_state.xml
[2025-07-27 17:12:28] -rw------- 1 boinc boinc      1017 Jul 27 17:11 memory_monitor_summary.json
[2025-07-27 17:12:28] -rw------- 1 boinc boinc        95 Jul 27 17:11 pilot_heartbeat.json
[2025-07-27 17:12:28] -rw------- 1 boinc boinc    233108 Jul 27 17:11 log.45743349._044317.job.log.tgz.1
[2025-07-27 17:12:28] -rw------- 1 boinc boinc      7755 Jul 27 17:11 heartbeat.json
[2025-07-27 17:12:28] -rw-r--r-- 1 boinc boinc      8192 Jul 27 17:12 boinc_mmap_file
[2025-07-27 17:12:28] -rw-r--r-- 1 boinc boinc        27 Jul 27 17:12 wrapper_checkpoint.txt
[2025-07-27 17:12:28] -rw------- 1 boinc boinc       747 Jul 27 17:12 pilotlog.txt
[2025-07-27 17:12:28] -rw------- 1 boinc boinc    557064 Jul 27 17:12 log.45743349._044317.job.log.1
[2025-07-27 17:12:28] -rw------- 1 boinc boinc       357 Jul 27 17:12 output.list
[2025-07-27 17:12:28] -rw-r--r-- 1 boinc boinc       620 Jul 27 17:12 runtime_log
[2025-07-27 17:12:28] -rw------- 1 boinc boinc    808960 Jul 27 17:12 result.tar.gz
[2025-07-27 17:12:28] -rw-r--r-- 1 boinc boinc      8754 Jul 27 17:12 runtime_log.err
[2025-07-27 17:12:28] -rw------- 1 boinc boinc       663 Jul 27 17:12 5sDMDmUA1z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmR7SLDm6BVIPm.diag
[2025-07-27 17:12:28] -rw-r--r-- 1 boinc boinc     21676 Jul 27 17:12 stderr.txt
[2025-07-27 17:12:28] HITS file was successfully produced:
[2025-07-27 17:12:28] -rw------- 1 boinc boinc 208990354 Jul 27 17:11 shared/HITS.pool.root.1
[2025-07-27 17:12:28]  *** Contents of shared directory: ***
[2025-07-27 17:12:28] total 429452
[2025-07-27 17:12:28] -rw-r--r-- 2 boinc boinc 229382595 Jul 27 15:35 ATLAS.root_0
[2025-07-27 17:12:28] -rw-r--r-- 2 boinc boinc    542901 Jul 27 15:35 input.tar.gz
[2025-07-27 17:12:28] -rw-r--r-- 2 boinc boinc     15095 Jul 27 15:35 start_atlas.sh
[2025-07-27 17:12:28] -rw------- 1 boinc boinc 208990354 Jul 27 17:11 HITS.pool.root.1
[2025-07-27 17:12:28] -rw------- 1 boinc boinc    808960 Jul 27 17:12 result.tar.gz
17:12:29 (2236088): run_atlas exited; CPU time 16679.247745
17:12:29 (2236088): called boinc_finish(0)

</stderr_txt>
]]>

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