Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:53:13 (3816483): wrapper (7.7.26015): starting
18:53:13 (3816483): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 18:53:13] Arguments: --nthreads 12
[2025-07-26 18:53:13] Threads: 12
[2025-07-26 18:53:13] Checking for CVMFS
[2025-07-26 18:53:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 18:53:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 18:53:13] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 18:53:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 18:53:14] 2.11.5.0 6736 36506 165140 148795 3 419 28746895 45568000 13019 130560 0 284703606 99.779 200023996 26074 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-26 18:53:14] CVMFS is ok
[2025-07-26 18:53:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 18:53:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 18:53:14] Further information can be found at the LHC@home message board.
[2025-07-26 18:53:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 18:53:14] Checking for apptainer binary...
[2025-07-26 18:53:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 18:53:14] Running /usr/bin/apptainer --version
[2025-07-26 18:53:14] apptainer version 1.4.1-1.el9
[2025-07-26 18:53:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 18:53:14] wns0046.triumf.lcg
[2025-07-26 18:53:14] apptainer works
[2025-07-26 18:53:14] Set ATHENA_PROC_NUMBER=12
[2025-07-26 18:53:14] Set ATHENA_CORE_NUMBER=12
[2025-07-26 18:53:14] Starting ATLAS job with PandaID=6745891117
[2025-07-26 18:53:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 18:56:13]  *** The last 200 lines of the pilot log: ***
[2025-07-26 18:56:13] 2025-07-27 01:55:59,367 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 18:56:13] 2025-07-27 01:55:59,367 | WARNING  | found no stored workdir sizes
[2025-07-26 18:56:13] 2025-07-27 01:55:59,367 | INFO     | will not add max space = 0 B to job metrics
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | WARNING  | wrong length of table data, x=[1753581223.0], y=[627.0] (must be same and length>=4)
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | could have reported an average CPU frequency of 2669 MHz (4 samples)
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | ..............................
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | . Timing measurements:
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | . get job = 0 s
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | . initial setup = 2 s
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | . payload setup = 3 s
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | . stage-in = 0 s
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | . payload execution = 14 s
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | . stage-out = 0 s
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | . log creation = 0 s
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | ..............................
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745891117/pilotlog.txt
[2025-07-26 18:56:13] 2025-07-27 01:55:59,378 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-26 18:56:13] - Log from pilotlog.txt -
[2025-07-26 18:56:13] 2025-07-27 01:55:59,366 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 18:56:13] 2025-07-27 01:55:59,366 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 18:56:13] 2025-07-27 01:55:59,367 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 18:56:13] 2025-07-27 01:55:59,367 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 18:56:13] 2025-07-27 01:55:59,367 | WARNING  | found no stored workdir sizes
[2025-07-26 18:56:13] 2025-07-27 01:55:59,367 | INFO     | will not add max space = 0 B to job metrics
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | WARNING  | wrong length of table data, x=[1753581223.0], y=[627.0] (must be same and length>=4)
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | could have reported an average CPU frequency of 2669 MHz (4 samples)
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | ..............................
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | . Timing measurements:
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | . get job = 0 s
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | . initial setup = 2 s
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | . payload setup = 3 s
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | . stage-in = 0 s
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | . payload execution = 14 s
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | . stage-out = 0 s
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | . log creation = 0 s
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | ..............................
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745891117/pilotlog.txt
[2025-07-26 18:56:13] 2025-07-27 01:55:59,378 | WARNING  | 
[2025-07-26 18:56:13] [begin log extracts]
[2025-07-26 18:56:13] - Log from pilotlog.txt -
[2025-07-26 18:56:13] 2025-07-27 01:55:59,366 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 18:56:13] 2025-07-27 01:55:59,366 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 18:56:13] 2025-07-27 01:55:59,367 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 18:56:13] 2025-07-27 01:55:59,367 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 18:56:13] 2025-07-27 01:55:59,367 | WARNING  | found no stored workdir sizes
[2025-07-26 18:56:13] 2025-07-27 01:55:59,367 | INFO     | will not add max space = 0 B to job metrics
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | WARNING  | wrong length of table data, x=[1753581223.0], y=[627.0] (must be same and length>=4)
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | could have reported an average CPU frequency of 2669 MHz (4 samples)
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | ..............................
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | . Timing measurements:
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | . get job = 0 s
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | . initial setup = 2 s
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | . payload setup = 3 s
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | . stage-in = 0 s
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | . payload execution = 14 s
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | . stage-out = 0 s
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | . log creation = 0 s
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | ..............................
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-26 18:56:13] 2025-07-27 01:55:59,368 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745891117/pilotlog.txt
[2025-07-26 18:56:13] [end log extracts]
[2025-07-26 18:56:13] 2025-07-27 01:55:59,379 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-26 18:56:13] 2025-07-27 01:55:59,379 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-26 18:56:13] 2025-07-27 01:55:59,436 | INFO     | 
[2025-07-26 18:56:13] 2025-07-27 01:55:59,437 | INFO     | job summary report
[2025-07-26 18:56:13] 2025-07-27 01:55:59,437 | INFO     | --------------------------------------------------
[2025-07-26 18:56:13] 2025-07-27 01:55:59,437 | INFO     | PanDA job id: 6745891117
[2025-07-26 18:56:13] 2025-07-27 01:55:59,437 | INFO     | task id: 45758408
[2025-07-26 18:56:13] 2025-07-27 01:55:59,437 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-26 18:53:50,035 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-26 18:56:13] 2025-07-27 01:55:59,437 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 18:56:13] 2025-07-27 01:55:59,437 | INFO     | pilot state: failed 
[2025-07-26 18:56:13] 2025-07-27 01:55:59,437 | INFO     | transexitcode: 65
[2025-07-26 18:56:13] 2025-07-27 01:55:59,437 | INFO     | exeerrorcode: 65
[2025-07-26 18:56:13] 2025-07-27 01:55:59,437 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-26 18:56:13] 2025-07-27 01:55:59,437 | INFO     | exitcode: 65
[2025-07-26 18:56:13] 2025-07-27 01:55:59,437 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-26 18:56:13] 2025-07-27 01:55:59,437 | INFO     | cpuconsumptiontime: 15 s
[2025-07-26 18:56:13] 2025-07-27 01:55:59,437 | INFO     | nevents: 0
[2025-07-26 18:56:13] 2025-07-27 01:55:59,437 | INFO     | neventsw: 0
[2025-07-26 18:56:13] 2025-07-27 01:55:59,437 | INFO     | pid: 3827492
[2025-07-26 18:56:13] 2025-07-27 01:55:59,437 | INFO     | pgrp: 3827492
[2025-07-26 18:56:13] 2025-07-27 01:55:59,437 | INFO     | corecount: 12
[2025-07-26 18:56:13] 2025-07-27 01:55:59,437 | INFO     | event service: False
[2025-07-26 18:56:13] 2025-07-27 01:55:59,438 | INFO     | sizes: {0: 2397484, 1: 2397484, 3: 2397774, 11: 2397802, 21: 2420972, 22: 2425264, 24: 2425420, 143: 2425586}
[2025-07-26 18:56:13] 2025-07-27 01:55:59,438 | INFO     | --------------------------------------------------
[2025-07-26 18:56:13] 2025-07-27 01:55:59,438 | INFO     | 
[2025-07-26 18:56:13] 2025-07-27 01:55:59,438 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-26 18:56:13] 2025-07-27 01:55:59,453 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 18:56:13] 2025-07-27 01:55:59,453 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 18:56:13] 2025-07-27 01:55:59,453 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 18:56:13] 2025-07-27 01:55:59,453 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 18:56:13] 2025-07-27 01:55:59,453 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 18:56:13] 2025-07-27 01:55:59,453 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 18:56:13] 2025-07-27 01:55:59,453 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 18:56:13] 2025-07-27 01:55:59,453 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 18:56:13] 2025-07-27 01:55:59,453 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 18:56:13] 2025-07-27 01:55:59,453 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 18:56:13] 2025-07-27 01:55:59,453 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 18:56:13] 2025-07-27 01:55:59,453 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 18:56:13] 2025-07-27 01:55:59,453 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 18:56:13] 2025-07-27 01:55:59,454 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 18:56:13] 2025-07-27 01:55:59,454 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 18:56:13] 2025-07-27 01:55:59,454 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 18:56:13] 2025-07-27 01:55:59,454 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 18:56:13] 2025-07-27 01:55:59,454 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 18:56:13] 2025-07-27 01:55:59,454 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 18:56:13] 2025-07-27 01:55:59,454 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 18:56:13] 2025-07-27 01:55:59,454 | INFO     | job 6745891117 has completed (purged errors)
[2025-07-26 18:56:13] 2025-07-27 01:55:59,454 | INFO     | overall cleanup function is called
[2025-07-26 18:56:13] 2025-07-27 01:56:00,460 | INFO     | --- collectZombieJob: --- 10, [3827492]
[2025-07-26 18:56:13] 2025-07-27 01:56:00,460 | INFO     | zombie collector waiting for pid 3827492
[2025-07-26 18:56:13] 2025-07-27 01:56:00,461 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 18:56:13] 2025-07-27 01:56:00,461 | INFO     | collected zombie processes
[2025-07-26 18:56:13] 2025-07-27 01:56:00,461 | INFO     | will attempt to kill all subprocesses of pid=3827492
[2025-07-26 18:56:13] 2025-07-27 01:56:00,613 | INFO     | process IDs to be killed: [3827492] (in reverse order)
[2025-07-26 18:56:13] 2025-07-27 01:56:00,671 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 18:56:13] 2025-07-27 01:56:00,671 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 18:56:13] 2025-07-27 01:56:00,678 | INFO     | did not find any defunct processes belonging to 3827492
[2025-07-26 18:56:13] 2025-07-27 01:56:00,684 | INFO     | did not find any defunct processes belonging to 3827492
[2025-07-26 18:56:13] 2025-07-27 01:56:00,684 | INFO     | ready for new job
[2025-07-26 18:56:13] 2025-07-27 01:56:00,684 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 18:56:13] 2025-07-27 01:56:00,685 | INFO     | ***************************************
[2025-07-26 18:56:13] 2025-07-27 01:56:00,686 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 18:56:13] 2025-07-27 01:56:00,686 | INFO     | ***************************************
[2025-07-26 18:56:13] 2025-07-27 01:56:00,686 | INFO     | 
[2025-07-26 18:56:13] 2025-07-27 01:56:00,688 | INFO     | architecture information:
[2025-07-26 18:56:13] 2025-07-27 01:56:00,688 | INFO     | executing command: cat /etc/os-release
[2025-07-26 18:56:13] 2025-07-27 01:56:00,697 | INFO     | cat /etc/os-release:
[2025-07-26 18:56:13] NAME="CentOS Linux"
[2025-07-26 18:56:13] VERSION="7 (Core)"
[2025-07-26 18:56:13] ID="centos"
[2025-07-26 18:56:13] ID_LIKE="rhel fedora"
[2025-07-26 18:56:13] VERSION_ID="7"
[2025-07-26 18:56:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 18:56:13] ANSI_COLOR="0;31"
[2025-07-26 18:56:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 18:56:13] HOME_URL="https://www.centos.org/"
[2025-07-26 18:56:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 18:56:13] 
[2025-07-26 18:56:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 18:56:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 18:56:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 18:56:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 18:56:13] 
[2025-07-26 18:56:13] 2025-07-27 01:56:00,697 | INFO     | ***************************************
[2025-07-26 18:56:13] 2025-07-27 01:56:01,200 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-26 18:56:13] 2025-07-27 01:56:01,210 | INFO     | sufficient remaining disk space (2218673569792 B)
[2025-07-26 18:56:13] 2025-07-27 01:56:01,211 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 18:56:13] 2025-07-27 01:56:01,211 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 18:56:13] 2025-07-27 01:56:01,211 | INFO     | update_server=False
[2025-07-26 18:56:13] 2025-07-27 01:56:01,211 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 18:56:13] 2025-07-27 01:56:01,211 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-26 18:56:13] 2025-07-27 01:56:01,211 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 18:56:13] 2025-07-27 01:56:01,212 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 18:56:13] 2025-07-27 01:56:01,212 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 18:56:13] 2025-07-27 01:56:01,212 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 18:56:13] 2025-07-27 01:56:01,220 | INFO     | all payload control threads have been joined
[2025-07-26 18:56:13] 2025-07-27 01:56:01,540 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 18:56:13] 2025-07-27 01:56:01,591 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-26 18:56:13] 2025-07-27 01:56:01,591 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-26 18:56:13] 2025-07-27 01:56:01,592 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 18:56:13] 2025-07-27 01:56:01,592 | INFO     | will abort loop
[2025-07-26 18:56:13] 2025-07-27 01:56:01,787 | INFO     | all data control threads have been joined
[2025-07-26 18:56:13] 2025-07-27 01:56:02,107 | INFO     | all job control threads have been joined
[2025-07-26 18:56:13] 2025-07-27 01:56:02,216 | INFO     | [job] retrieve thread has finished
[2025-07-26 18:56:13] 2025-07-27 01:56:02,217 | INFO     | [job] queue monitor thread has finished
[2025-07-26 18:56:13] 2025-07-27 01:56:02,225 | INFO     | [payload] control thread has finished
[2025-07-26 18:56:13] 2025-07-27 01:56:02,583 | INFO     | [job] validate thread has finished
[2025-07-26 18:56:13] 2025-07-27 01:56:02,597 | INFO     | [job] job monitor thread has finished
[2025-07-26 18:56:13] 2025-07-27 01:56:02,657 | INFO     | [data] copytool_in thread has finished
[2025-07-26 18:56:13] 2025-07-27 01:56:02,726 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 18:56:13] 2025-07-27 01:56:02,792 | INFO     | [data] control thread has finished
[2025-07-26 18:56:13] 2025-07-27 01:56:02,810 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 18:56:13] 2025-07-27 01:56:02,820 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 18:56:13] 2025-07-27 01:56:02,934 | INFO     | [payload] validate_post thread has finished
[2025-07-26 18:56:13] 2025-07-27 01:56:03,113 | INFO     | [job] control thread has finished
[2025-07-26 18:56:13] 2025-07-27 01:56:03,298 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 18:56:13] 2025-07-27 01:56:03,383 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 18:56:13] 2025-07-27 01:56:03,487 | INFO     | [payload] failed_post thread has finished
[2025-07-26 18:56:13] 2025-07-27 01:56:03,545 | INFO     | [data] copytool_out thread has finished
[2025-07-26 18:56:13] 2025-07-27 01:56:07,303 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 18:56:13] 2025-07-27 01:56:08,434 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140374492362560)>', '<ExcThread(monitor, started 140373817026304)>']
[2025-07-26 18:56:13] 2025-07-27 01:56:09,243 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 18:56:13] 2025-07-27 01:56:09,243 | INFO     | [monitor] control thread has ended
[2025-07-26 18:56:13] 2025-07-27 01:56:13,456 | INFO     | all workflow threads have been joined
[2025-07-26 18:56:13] 2025-07-27 01:56:13,457 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 18:56:13] 2025-07-27 01:56:13,457 | INFO     | traces error code: 0
[2025-07-26 18:56:13] 2025-07-27 01:56:13,457 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 18:56:13] 2025-07-27 01:56:13,609 [wrapper] ==== pilot stdout END ====
[2025-07-26 18:56:13] 2025-07-27 01:56:13,611 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 18:56:13] 2025-07-27 01:56:13,613 [wrapper] pilotpid: 3820077
[2025-07-26 18:56:13] 2025-07-27 01:56:13,615 [wrapper] Pilot exit status: 0
[2025-07-26 18:56:13] 2025-07-27 01:56:13,623 [wrapper] pandaids: 6745891117
[2025-07-26 18:56:13] 2025-07-27 01:56:13,662 [wrapper] cleanup supervisor_pilot 3820083 3820078
[2025-07-26 18:56:13] 2025-07-27 01:56:13,664 [wrapper] Test setup, not cleaning
[2025-07-26 18:56:13] 2025-07-27 01:56:13,666 [wrapper] apfmon messages muted
[2025-07-26 18:56:13] 2025-07-27 01:56:13,668 [wrapper] ==== wrapper stdout END ====
[2025-07-26 18:56:13] 2025-07-27 01:56:13,670 [wrapper] ==== wrapper stderr END ====
[2025-07-26 18:56:13]  *** Error codes and diagnostics ***
[2025-07-26 18:56:13]     "exeErrorCode": 65,
[2025-07-26 18:56:13]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-26 18:56:13]     "pilotErrorCode": 1305,
[2025-07-26 18:56:13]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-26 18:56:13]  *** Listing of results directory ***
[2025-07-26 18:56:13] total 234852
[2025-07-26 18:56:13] -rw-r--r--. 1 boinc boinc      5112 Jul 26 16:23 queuedata.json
[2025-07-26 18:56:13] -rwx------. 1 boinc boinc     36292 Jul 26 16:24 runpilot2-wrapper.sh
[2025-07-26 18:56:13] -rw-r--r--. 1 boinc boinc    530466 Jul 26 16:24 pilot3.tar.gz
[2025-07-26 18:56:13] -rw-r--r--. 1 boinc boinc       100 Jul 26 18:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 18:56:13] -rwxr-xr-x. 1 boinc boinc      7986 Jul 26 18:53 run_atlas
[2025-07-26 18:56:13] -rw-r--r--. 1 boinc boinc       105 Jul 26 18:53 job.xml
[2025-07-26 18:56:13] -rw-r--r--. 2 boinc boinc 236424742 Jul 26 18:53 EVNT.45758406._000005.pool.root.1
[2025-07-26 18:56:13] -rw-r--r--. 2 boinc boinc     15095 Jul 26 18:53 start_atlas.sh
[2025-07-26 18:56:13] drwxrwx--x. 2 boinc boinc      4096 Jul 26 18:53 shared
[2025-07-26 18:56:13] -rw-r--r--. 2 boinc boinc    542892 Jul 26 18:53 input.tar.gz
[2025-07-26 18:56:13] -rw-r--r--. 1 boinc boinc      6596 Jul 26 18:53 init_data.xml
[2025-07-26 18:56:13] -rw-r--r--. 1 boinc boinc         0 Jul 26 18:53 boinc_lockfile
[2025-07-26 18:56:13] -rw-r--r--. 1 boinc boinc      2578 Jul 26 18:53 pandaJob.out
[2025-07-26 18:56:13] -rw-------. 1 boinc boinc    980125 Jul 26 18:53 agis_schedconf.cvmfs.json
[2025-07-26 18:56:13] -rw-------. 1 boinc boinc   1593052 Jul 26 18:53 agis_ddmendpoints.agis.ALL.json
[2025-07-26 18:56:13] drwx------. 4 boinc boinc      4096 Jul 26 18:53 pilot3
[2025-07-26 18:56:13] -rw-------. 1 boinc boinc       952 Jul 26 18:53 memory_monitor_summary.json
[2025-07-26 18:56:13] -rw-r--r--. 1 boinc boinc       522 Jul 26 18:53 boinc_task_state.xml
[2025-07-26 18:56:13] -rw-------. 1 boinc boinc     20431 Jul 26 18:53 log.45758408._000104.job.log.tgz.1
[2025-07-26 18:56:13] -rw-------. 1 boinc boinc        95 Jul 26 18:55 pilot_heartbeat.json
[2025-07-26 18:56:13] -rw-------. 1 boinc boinc      8372 Jul 26 18:55 heartbeat.json
[2025-07-26 18:56:13] -rw-r--r--. 1 boinc boinc      8192 Jul 26 18:56 boinc_mmap_file
[2025-07-26 18:56:13] -rw-r--r--. 1 boinc boinc        22 Jul 26 18:56 wrapper_checkpoint.txt
[2025-07-26 18:56:13] -rw-------. 1 boinc boinc      4665 Jul 26 18:56 pilotlog.txt
[2025-07-26 18:56:13] -rw-------. 1 boinc boinc     74219 Jul 26 18:56 log.45758408._000104.job.log.1
[2025-07-26 18:56:13] -rw-------. 1 boinc boinc       188 Jul 26 18:56 output.list
[2025-07-26 18:56:13] -rw-r--r--. 1 boinc boinc       620 Jul 26 18:56 runtime_log
[2025-07-26 18:56:13] -rw-------. 1 boinc boinc    112640 Jul 26 18:56 result.tar.gz
[2025-07-26 18:56:13] -rw-------. 1 boinc boinc       644 Jul 26 18:56 Wc2NDmIR3z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmOc1KDmrL0bHo.diag
[2025-07-26 18:56:13] -rw-r--r--. 1 boinc boinc      8485 Jul 26 18:56 runtime_log.err
[2025-07-26 18:56:13] -rw-r--r--. 1 boinc boinc     21603 Jul 26 18:56 stderr.txt
[2025-07-26 18:56:13] No HITS result produced
[2025-07-26 18:56:13]  *** Contents of shared directory: ***
[2025-07-26 18:56:13] total 231544
[2025-07-26 18:56:13] -rw-r--r--. 2 boinc boinc 236424742 Jul 26 18:53 ATLAS.root_0
[2025-07-26 18:56:13] -rw-r--r--. 2 boinc boinc     15095 Jul 26 18:53 start_atlas.sh
[2025-07-26 18:56:13] -rw-r--r--. 2 boinc boinc    542892 Jul 26 18:53 input.tar.gz
[2025-07-26 18:56:13] -rw-------. 1 boinc boinc    112640 Jul 26 18:56 result.tar.gz
18:56:14 (3816483): run_atlas exited; CPU time 18.728006
18:56:14 (3816483): called boinc_finish(0)

</stderr_txt>
]]>

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