Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:13:49 (4075362): wrapper (7.7.26015): starting
07:13:49 (4075362): wrapper: running run_atlas (--nthreads 4)
[2025-07-29 07:13:49] Arguments: --nthreads 4
[2025-07-29 07:13:49] Threads: 4
[2025-07-29 07:13:49] Checking for CVMFS
[2025-07-29 07:13:49] No cvmfs_config command found, will try listing directly
[2025-07-29 07:13:49] CVMFS is ok
[2025-07-29 07:13:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-29 07:13:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-29 07:13:49] Further information can be found at the LHC@home message board.
[2025-07-29 07:13:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-29 07:13:49] Checking for apptainer binary...
[2025-07-29 07:13:49] which: no apptainer in ((null))
[2025-07-29 07:13:49] apptainer is not installed, using version from CVMFS
[2025-07-29 07:13:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-29 07:13:50] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-07-29 07:13:50] apptainer works
[2025-07-29 07:13:50] Set ATHENA_PROC_NUMBER=4
[2025-07-29 07:13:50] Set ATHENA_CORE_NUMBER=4
[2025-07-29 07:13:50] Starting ATLAS job with PandaID=6745502449
[2025-07-29 07:13:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-29 10:39:18]  *** The last 200 lines of the pilot log: ***
[2025-07-29 10:39:18] 2025-07-29 08:38:42,913 | INFO     | monitor loop #894: job 0:6745502449 is in state 'finished'
[2025-07-29 10:39:18] 2025-07-29 08:38:42,913 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-29 10:39:18] 2025-07-29 08:38:45,030 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-29 10:39:18] 2025-07-29 08:38:45,039 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2589.0849531249996
[2025-07-29 10:39:18] 2025-07-29 08:38:45,051 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6745502449/memory_monitor_summary.json (trf name=prmon)
[2025-07-29 10:39:18] 2025-07-29 08:38:45,052 | INFO     | extracted standard info from prmon json
[2025-07-29 10:39:18] 2025-07-29 08:38:45,052 | INFO     | extracted standard memory fields from prmon json
[2025-07-29 10:39:18] 2025-07-29 08:38:45,052 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-29 10:39:18] 2025-07-29 08:38:45,052 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-29 10:39:18] 2025-07-29 08:38:45,052 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-29 10:39:18] 2025-07-29 08:38:45,057 | INFO     | fitting pss+swap vs Time
[2025-07-29 10:39:18] 2025-07-29 08:38:45,057 | INFO     | sum of square deviations: 2518000700.0
[2025-07-29 10:39:18] 2025-07-29 08:38:45,058 | INFO     | sum of deviations: -26930624527.99999
[2025-07-29 10:39:18] 2025-07-29 08:38:45,058 | INFO     | mean x: 1753772167.0
[2025-07-29 10:39:18] 2025-07-29 08:38:45,058 | INFO     | mean y: 2370005.2139303484
[2025-07-29 10:39:18] 2025-07-29 08:38:45,059 | INFO     | -- intersect: 18759386131.990185
[2025-07-29 10:39:18] 2025-07-29 08:38:45,059 | INFO     | intersect: 18759386131.990185
[2025-07-29 10:39:18] 2025-07-29 08:38:45,059 | INFO     | chi2: 1.4881016074081446
[2025-07-29 10:39:18] 2025-07-29 08:38:45,059 | INFO     | sum of square deviations: 2334722845.0
[2025-07-29 10:39:18] 2025-07-29 08:38:45,061 | INFO     | sum of deviations: -25845552471.5
[2025-07-29 10:39:18] 2025-07-29 08:38:45,061 | INFO     | mean x: 1753772014.5
[2025-07-29 10:39:18] 2025-07-29 08:38:45,061 | INFO     | mean y: 2370908.2908163266
[2025-07-29 10:39:18] 2025-07-29 08:38:45,061 | INFO     | -- intersect: 19416755241.266327
[2025-07-29 10:39:18] 2025-07-29 08:38:45,061 | INFO     | intersect: 19416755241.266327
[2025-07-29 10:39:18] 2025-07-29 08:38:45,061 | INFO     | chi2: 1.485562654041128
[2025-07-29 10:39:18] 2025-07-29 08:38:45,062 | INFO     | current chi2=1.485562654041128 (change=0.17061693599261266 %)
[2025-07-29 10:39:18] 2025-07-29 08:38:45,062 | INFO     | right removable region: 195
[2025-07-29 10:39:18] 2025-07-29 08:38:45,062 | INFO     | sum of square deviations: 2334722845.0
[2025-07-29 10:39:18] 2025-07-29 08:38:45,063 | INFO     | sum of deviations: -49312715980.00001
[2025-07-29 10:39:18] 2025-07-29 08:38:45,063 | INFO     | mean x: 1753772319.5
[2025-07-29 10:39:18] 2025-07-29 08:38:45,063 | INFO     | mean y: 2388321.275510204
[2025-07-29 10:39:18] 2025-07-29 08:38:45,064 | INFO     | -- intersect: 37044590769.54484
[2025-07-29 10:39:18] 2025-07-29 08:38:45,064 | INFO     | intersect: 37044590769.54484
[2025-07-29 10:39:18] 2025-07-29 08:38:45,064 | INFO     | chi2: 0.18099665435190243
[2025-07-29 10:39:18] 2025-07-29 08:38:45,064 | INFO     | current chi2=0.18099665435190243 (change=87.8370768870314 %)
[2025-07-29 10:39:18] 2025-07-29 08:38:45,064 | INFO     | sum of square deviations: 2160561440.0
[2025-07-29 10:39:18] 2025-07-29 08:38:45,065 | INFO     | sum of deviations: -41493132872.999985
[2025-07-29 10:39:18] 2025-07-29 08:38:45,066 | INFO     | mean x: 1753772472.0
[2025-07-29 10:39:18] 2025-07-29 08:38:45,066 | INFO     | mean y: 2381453.890052356
[2025-07-29 10:39:18] 2025-07-29 08:38:45,066 | INFO     | -- intersect: 33683216843.466217
[2025-07-29 10:39:18] 2025-07-29 08:38:45,066 | INFO     | intersect: 33683216843.466217
[2025-07-29 10:39:18] 2025-07-29 08:38:45,066 | INFO     | chi2: 0.16138263771301609
[2025-07-29 10:39:18] 2025-07-29 08:38:45,066 | INFO     | current chi2=0.16138263771301609 (change=10.836673588867464 %)
[2025-07-29 10:39:18] 2025-07-29 08:38:45,066 | INFO     | left removable region: 20
[2025-07-29 10:39:18] 2025-07-29 08:38:45,067 | INFO     | sum of square deviations: 1661798600.0
[2025-07-29 10:39:18] 2025-07-29 08:38:45,068 | INFO     | sum of deviations: -23258094518.0
[2025-07-29 10:39:18] 2025-07-29 08:38:45,068 | INFO     | mean x: 1753772594.0
[2025-07-29 10:39:18] 2025-07-29 08:38:45,068 | INFO     | mean y: 2366243.4171428573
[2025-07-29 10:39:18] 2025-07-29 08:38:45,068 | INFO     | -- intersect: 24547704501.81382
[2025-07-29 10:39:18] 2025-07-29 08:38:45,068 | INFO     | intersect: 24547704501.81382
[2025-07-29 10:39:18] 2025-07-29 08:38:45,068 | INFO     | chi2: 0.07974464764221068
[2025-07-29 10:39:18] 2025-07-29 08:38:45,069 | INFO     | -- intersect: 24547704501.81382
[2025-07-29 10:39:18] 2025-07-29 08:38:45,069 | INFO     | current memory leak: -14.00 B/s (using 175 data points, chi2=0.08)
[2025-07-29 10:39:18] 2025-07-29 08:38:45,069 | INFO     | could have reported an average CPU frequency of 2594 MHz (10 samples)
[2025-07-29 10:39:18] 2025-07-29 08:38:45,069 | INFO     | ..............................
[2025-07-29 10:39:18] 2025-07-29 08:38:45,069 | INFO     | . Timing measurements:
[2025-07-29 10:39:18] 2025-07-29 08:38:45,070 | INFO     | . get job = 0 s
[2025-07-29 10:39:18] 2025-07-29 08:38:45,070 | INFO     | . initial setup = 1 s
[2025-07-29 10:39:18] 2025-07-29 08:38:45,070 | INFO     | . payload setup = 7 s
[2025-07-29 10:39:18] 2025-07-29 08:38:45,070 | INFO     | . stage-in = 0 s
[2025-07-29 10:39:18] 2025-07-29 08:38:45,070 | INFO     | . payload execution = 12247 s
[2025-07-29 10:39:18] 2025-07-29 08:38:45,070 | INFO     | . stage-out = 0 s
[2025-07-29 10:39:18] 2025-07-29 08:38:45,070 | INFO     | . log creation = 0 s
[2025-07-29 10:39:18] 2025-07-29 08:38:45,070 | INFO     | ..............................
[2025-07-29 10:39:18] 2025-07-29 08:38:45,315 | INFO     | 
[2025-07-29 10:39:18] 2025-07-29 08:38:45,315 | INFO     | job summary report
[2025-07-29 10:39:18] 2025-07-29 08:38:45,315 | INFO     | --------------------------------------------------
[2025-07-29 10:39:18] 2025-07-29 08:38:45,315 | INFO     | PanDA job id: 6745502449
[2025-07-29 10:39:18] 2025-07-29 08:38:45,315 | INFO     | task id: 45743349
[2025-07-29 10:39:18] 2025-07-29 08:38:45,315 | INFO     | errors: (none)
[2025-07-29 10:39:18] 2025-07-29 08:38:45,315 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-29 10:39:18] 2025-07-29 08:38:45,315 | INFO     | pilot state: finished 
[2025-07-29 10:39:18] 2025-07-29 08:38:45,315 | INFO     | transexitcode: 0
[2025-07-29 10:39:18] 2025-07-29 08:38:45,315 | INFO     | exeerrorcode: 0
[2025-07-29 10:39:18] 2025-07-29 08:38:45,316 | INFO     | exeerrordiag: 
[2025-07-29 10:39:18] 2025-07-29 08:38:45,316 | INFO     | exitcode: 0
[2025-07-29 10:39:18] 2025-07-29 08:38:45,316 | INFO     | exitmsg: OK
[2025-07-29 10:39:18] 2025-07-29 08:38:45,316 | INFO     | cpuconsumptiontime: 47050 s
[2025-07-29 10:39:18] 2025-07-29 08:38:45,316 | INFO     | nevents: 400
[2025-07-29 10:39:18] 2025-07-29 08:38:45,316 | INFO     | neventsw: 0
[2025-07-29 10:39:18] 2025-07-29 08:38:45,316 | INFO     | pid: 4086112
[2025-07-29 10:39:18] 2025-07-29 08:38:45,316 | INFO     | pgrp: 4086112
[2025-07-29 10:39:18] 2025-07-29 08:38:45,316 | INFO     | corecount: 4
[2025-07-29 10:39:18] 2025-07-29 08:38:45,316 | INFO     | event service: False
[2025-07-29 10:39:18] 2025-07-29 08:38:45,316 | INFO     | sizes: {0: 2391642, 1: 2391897, 5: 2392159, 12: 2392215, 12258: 2421963, 12259: 2421962, 12261: 2431166, 12264: 2431222, 12269: 2431416}
[2025-07-29 10:39:18] 2025-07-29 08:38:45,316 | INFO     | --------------------------------------------------
[2025-07-29 10:39:18] 2025-07-29 08:38:45,317 | INFO     | 
[2025-07-29 10:39:18] 2025-07-29 08:38:45,317 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2025-07-29 10:39:18] 2025-07-29 08:38:45,335 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-29 10:39:18] 2025-07-29 08:38:45,335 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-29 10:39:18] 2025-07-29 08:38:45,335 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-29 10:39:18] 2025-07-29 08:38:45,335 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-29 10:39:18] 2025-07-29 08:38:45,335 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-29 10:39:18] 2025-07-29 08:38:45,335 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-29 10:39:18] 2025-07-29 08:38:45,336 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-29 10:39:18] 2025-07-29 08:38:45,336 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-29 10:39:18] 2025-07-29 08:38:45,336 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-29 10:39:18] 2025-07-29 08:38:45,336 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-29 10:39:18] 2025-07-29 08:38:45,336 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-29 10:39:18] 2025-07-29 08:38:45,336 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-29 10:39:18] 2025-07-29 08:38:45,336 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-29 10:39:18] 2025-07-29 08:38:45,336 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-29 10:39:18] 2025-07-29 08:38:45,336 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-29 10:39:18] 2025-07-29 08:38:45,336 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-29 10:39:18] 2025-07-29 08:38:45,336 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-29 10:39:18] 2025-07-29 08:38:45,336 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-29 10:39:18] 2025-07-29 08:38:45,336 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-29 10:39:18] 2025-07-29 08:38:45,336 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-29 10:39:18] 2025-07-29 08:38:45,337 | INFO     | job 6745502449 has completed (purged errors)
[2025-07-29 10:39:18] 2025-07-29 08:38:45,337 | INFO     | overall cleanup function is called
[2025-07-29 10:39:18] 2025-07-29 08:38:46,053 | INFO     | PID=4079073 has CPU usage=13.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-29 10:39:18] 2025-07-29 08:38:46,053 | INFO     | .. there are 12 such processes running
[2025-07-29 10:39:18] 2025-07-29 08:38:46,344 | INFO     | --- collectZombieJob: --- 10, [4086112]
[2025-07-29 10:39:18] 2025-07-29 08:38:46,344 | INFO     | zombie collector waiting for pid 4086112
[2025-07-29 10:39:18] 2025-07-29 08:38:46,344 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-29 10:39:18] 2025-07-29 08:38:46,344 | INFO     | collected zombie processes
[2025-07-29 10:39:18] 2025-07-29 08:38:46,344 | INFO     | will attempt to kill all subprocesses of pid=4086112
[2025-07-29 10:39:18] 2025-07-29 08:38:46,618 | INFO     | process IDs to be killed: [4086112] (in reverse order)
[2025-07-29 10:39:18] 2025-07-29 08:38:46,704 | WARNING  | found no corresponding commands to process id(s)
[2025-07-29 10:39:18] 2025-07-29 08:38:46,705 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-29 10:39:18] 2025-07-29 08:38:46,712 | INFO     | did not find any defunct processes belonging to 4086112
[2025-07-29 10:39:18] 2025-07-29 08:38:46,720 | INFO     | did not find any defunct processes belonging to 4086112
[2025-07-29 10:39:18] 2025-07-29 08:38:46,720 | INFO     | ready for new job
[2025-07-29 10:39:18] 2025-07-29 08:38:46,720 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-29 10:39:18] 2025-07-29 08:38:46,722 | INFO     | ***************************************
[2025-07-29 10:39:18] 2025-07-29 08:38:46,722 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-29 10:39:18] 2025-07-29 08:38:46,722 | INFO     | ***************************************
[2025-07-29 10:39:18] 2025-07-29 08:38:46,722 | INFO     | 
[2025-07-29 10:39:18] 2025-07-29 08:38:46,724 | INFO     | architecture information:
[2025-07-29 10:39:18] 2025-07-29 08:38:46,725 | INFO     | executing command: cat /etc/os-release
[2025-07-29 10:39:18] 2025-07-29 08:38:46,734 | INFO     | cat /etc/os-release:
[2025-07-29 10:39:18] NAME="CentOS Linux"
[2025-07-29 10:39:18] VERSION="7 (Core)"
[2025-07-29 10:39:18] ID="centos"
[2025-07-29 10:39:18] ID_LIKE="rhel fedora"
[2025-07-29 10:39:18] VERSION_ID="7"
[2025-07-29 10:39:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-29 10:39:18] ANSI_COLOR="0;31"
[2025-07-29 10:39:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-29 10:39:18] HOME_URL="https://www.centos.org/"
[2025-07-29 10:39:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-29 10:39:18] 
[2025-07-29 10:39:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-29 10:39:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-29 10:39:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-29 10:39:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-29 10:39:18] 
[2025-07-29 10:39:18] 2025-07-29 08:38:46,735 | INFO     | ***************************************
[2025-07-29 10:39:18] 2025-07-29 08:38:47,238 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2025-07-29 10:39:18] 2025-07-29 08:38:47,252 | INFO     | sufficient remaining disk space (674999828480 B)
[2025-07-29 10:39:18] 2025-07-29 08:38:47,252 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-29 10:39:18] 2025-07-29 08:38:47,252 | INFO     | current server update state: UPDATING_FINAL
[2025-07-29 10:39:18] 2025-07-29 08:38:47,253 | INFO     | update_server=False
[2025-07-29 10:39:18] 2025-07-29 08:38:47,253 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-29 10:39:18] 2025-07-29 08:38:47,253 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-29 10:39:18] 2025-07-29 08:38:47,253 | INFO     | aborting loop
[2025-07-29 10:39:18] 2025-07-29 08:38:47,267 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-29 10:39:18] 2025-07-29 08:38:47,667 | INFO     | all payload control threads have been joined
[2025-07-29 10:39:18] 2025-07-29 08:38:47,860 | INFO     | all data control threads have been joined
[2025-07-29 10:39:18] 2025-07-29 08:38:48,258 | INFO     | [job] job monitor thread has finished
[2025-07-29 10:39:18] 2025-07-29 08:38:48,258 | INFO     | [job] retrieve thread has finished
[2025-07-29 10:39:18] 2025-07-29 08:38:48,297 | INFO     | [payload] validate_post thread has finished
[2025-07-29 10:39:18] 2025-07-29 08:38:48,404 | INFO     | all job control threads have been joined
[2025-07-29 10:39:18] 2025-07-29 08:38:48,430 | INFO     | [payload] execute_payloads thread has finished
[2025-07-29 10:39:18] 2025-07-29 08:38:48,569 | INFO     | [payload] validate_pre thread has finished
[2025-07-29 10:39:18] 2025-07-29 08:38:48,670 | INFO     | [payload] control thread has finished
[2025-07-29 10:39:18] 2025-07-29 08:38:48,865 | INFO     | [data] control thread has finished
[2025-07-29 10:39:18] 2025-07-29 08:38:49,172 | INFO     | [payload] failed_post thread has finished
[2025-07-29 10:39:18] 2025-07-29 08:38:49,272 | INFO     | [data] copytool_out thread has finished
[2025-07-29 10:39:18] 2025-07-29 08:38:49,409 | INFO     | [job] control thread has finished
[2025-07-29 10:39:18] 2025-07-29 08:38:49,431 | INFO     | [job] validate thread has finished
[2025-07-29 10:39:18] 2025-07-29 08:38:49,630 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-29 10:39:18] 2025-07-29 08:38:49,662 | INFO     | [job] create_data_payload thread has finished
[2025-07-29 10:39:18] 2025-07-29 08:38:49,720 | INFO     | [data] copytool_in thread has finished
[2025-07-29 10:39:18] 2025-07-29 08:38:50,126 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-29 10:39:18] 2025-07-29 08:38:50,178 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-29 10:39:18] 2025-07-29 08:38:51,183 | INFO     | [job] queue monitor thread has finished
[2025-07-29 10:39:18] 2025-07-29 08:38:54,131 | INFO     | [data] queue_monitor thread has finished
[2025-07-29 10:39:18] 2025-07-29 08:38:55,588 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22669245986624)>', '<ExcThread(monitor, started 22669007222528)>']
[2025-07-29 10:39:18] 2025-07-29 08:39:00,613 | INFO     | all workflow threads have been joined
[2025-07-29 10:39:18] 2025-07-29 08:39:00,613 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-29 10:39:18] 2025-07-29 08:39:00,613 | INFO     | traces error code: 0
[2025-07-29 10:39:18] 2025-07-29 08:39:00,613 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-29 10:39:18] 2025-07-29 08:39:18,478 | INFO     | PID=4079073 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-29 10:39:18] 2025-07-29 08:39:18,479 | INFO     | .. there are 12 such processes running
[2025-07-29 10:39:18] 2025-07-29 08:39:18,479 | INFO     | found 0 job(s) in 20 queues
[2025-07-29 10:39:18] 2025-07-29 08:39:18,479 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-29 10:39:18] 2025-07-29 08:39:18,479 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-29 10:39:18] 2025-07-29 08:39:18,479 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-29 10:39:18] 2025-07-29 08:39:18,479 | INFO     | [monitor] control thread has ended
[2025-07-29 10:39:18] 2025-07-29 08:39:18,579 [wrapper] ==== pilot stdout END ====
[2025-07-29 10:39:18] 2025-07-29 08:39:18,581 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-29 10:39:18] 2025-07-29 08:39:18,583 [wrapper] pilotpid: 4079073
[2025-07-29 10:39:18] 2025-07-29 08:39:18,585 [wrapper] Pilot exit status: 0
[2025-07-29 10:39:18] 2025-07-29 08:39:18,594 [wrapper] pandaids: 6745502449
[2025-07-29 10:39:18] 2025-07-29 08:39:18,639 [wrapper] cleanup supervisor_pilot  403610 4079074
[2025-07-29 10:39:18] 2025-07-29 08:39:18,641 [wrapper] Test setup, not cleaning
[2025-07-29 10:39:18] 2025-07-29 08:39:18,643 [wrapper] apfmon messages muted
[2025-07-29 10:39:18] 2025-07-29 08:39:18,645 [wrapper] ==== wrapper stdout END ====
[2025-07-29 10:39:18] 2025-07-29 08:39:18,647 [wrapper] ==== wrapper stderr END ====
[2025-07-29 10:39:18]  *** Error codes and diagnostics ***
[2025-07-29 10:39:18]     "exeErrorCode": 0,
[2025-07-29 10:39:18]     "exeErrorDiag": "",
[2025-07-29 10:39:18]     "pilotErrorCode": 0,
[2025-07-29 10:39:18]     "pilotErrorDiag": "",
[2025-07-29 10:39:18]  *** Listing of results directory ***
[2025-07-29 10:39:18] total 351816
[2025-07-29 10:39:18] -rw-r--r-- 1 boinc boinc    550332 Jun 18 17:33 pilot3.tar.gz
[2025-07-29 10:39:18] -rw-r--r-- 1 boinc boinc      5112 Jul 26 22:25 queuedata.json
[2025-07-29 10:39:18] -rwx------ 1 boinc boinc     36292 Jul 26 22:26 runpilot2-wrapper.sh
[2025-07-29 10:39:18] -rw-r--r-- 1 boinc boinc       100 Jul 29 07:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-29 10:39:18] -rwxr-xr-x 1 boinc boinc      7986 Jul 29 07:13 run_atlas
[2025-07-29 10:39:18] -rw-r--r-- 1 boinc boinc       105 Jul 29 07:13 job.xml
[2025-07-29 10:39:18] -rw-r--r-- 1 boinc boinc      6635 Jul 29 07:13 init_data.xml
[2025-07-29 10:39:18] -rw-r--r-- 2 boinc boinc 145706391 Jul 29 07:13 EVNT.45743347._002511.pool.root.1
[2025-07-29 10:39:18] -rw-r--r-- 2 boinc boinc     15095 Jul 29 07:13 start_atlas.sh
[2025-07-29 10:39:18] drwxrwx--x 2 boinc boinc      4096 Jul 29 07:13 shared
[2025-07-29 10:39:18] -rw-r--r-- 2 boinc boinc    564557 Jul 29 07:13 input.tar.gz
[2025-07-29 10:39:18] -rw-r--r-- 1 boinc boinc         0 Jul 29 07:13 boinc_lockfile
[2025-07-29 10:39:18] -rw-r--r-- 1 boinc boinc      2562 Jul 29 07:13 pandaJob.out
[2025-07-29 10:39:18] -rw------- 1 boinc boinc    977332 Jul 29 07:13 agis_schedconf.cvmfs.json
[2025-07-29 10:39:18] drwx------ 6 boinc boinc      4096 Jul 29 07:14 pilot3
[2025-07-29 10:39:18] -rw------- 1 boinc boinc 207694649 Jul 29 10:37 HITS.45743349._043978.pool.root.1
[2025-07-29 10:39:18] -rw-r--r-- 1 boinc boinc       529 Jul 29 10:38 boinc_task_state.xml
[2025-07-29 10:39:18] -rw------- 1 boinc boinc        95 Jul 29 10:38 pilot_heartbeat.json
[2025-07-29 10:39:18] -rw------- 1 boinc boinc      1035 Jul 29 10:38 memory_monitor_summary.json
[2025-07-29 10:39:18] -rw------- 1 boinc boinc   1589827 Jul 29 10:38 agis_ddmendpoints.agis.ALL.json
[2025-07-29 10:39:18] -rw------- 1 boinc boinc    318626 Jul 29 10:38 log.45743349._043978.job.log.tgz.1
[2025-07-29 10:39:18] -rw------- 1 boinc boinc      7834 Jul 29 10:38 heartbeat.json
[2025-07-29 10:39:18] -rw-r--r-- 1 boinc boinc      8192 Jul 29 10:39 boinc_mmap_file
[2025-07-29 10:39:18] -rw-r--r-- 1 boinc boinc        27 Jul 29 10:39 wrapper_checkpoint.txt
[2025-07-29 10:39:18] -rw------- 1 boinc boinc       823 Jul 29 10:39 pilotlog.txt
[2025-07-29 10:39:18] -rw------- 1 boinc boinc   1154381 Jul 29 10:39 log.45743349._043978.job.log.1
[2025-07-29 10:39:18] -rw------- 1 boinc boinc       357 Jul 29 10:39 output.list
[2025-07-29 10:39:18] -rw-r--r-- 1 boinc boinc       620 Jul 29 10:39 runtime_log
[2025-07-29 10:39:18] -rw------- 1 boinc boinc   1495040 Jul 29 10:39 result.tar.gz
[2025-07-29 10:39:18] -rw------- 1 boinc boinc       665 Jul 29 10:39 zOPKDmee0z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmr2SLDmGqwDCn.diag
[2025-07-29 10:39:18] -rw-r--r-- 1 boinc boinc      9027 Jul 29 10:39 runtime_log.err
[2025-07-29 10:39:18] -rw-r--r-- 1 boinc boinc     21053 Jul 29 10:39 stderr.txt
[2025-07-29 10:39:18] HITS file was successfully produced:
[2025-07-29 10:39:18] -rw------- 1 boinc boinc 207694649 Jul 29 10:37 shared/HITS.pool.root.1
[2025-07-29 10:39:18]  *** Contents of shared directory: ***
[2025-07-29 10:39:18] total 347156
[2025-07-29 10:39:18] -rw-r--r-- 2 boinc boinc 145706391 Jul 29 07:13 ATLAS.root_0
[2025-07-29 10:39:18] -rw-r--r-- 2 boinc boinc     15095 Jul 29 07:13 start_atlas.sh
[2025-07-29 10:39:18] -rw-r--r-- 2 boinc boinc    564557 Jul 29 07:13 input.tar.gz
[2025-07-29 10:39:18] -rw------- 1 boinc boinc 207694649 Jul 29 10:37 HITS.pool.root.1
[2025-07-29 10:39:18] -rw------- 1 boinc boinc   1495040 Jul 29 10:39 result.tar.gz
10:39:20 (4075362): run_atlas exited; CPU time 47489.416358
10:39:20 (4075362): called boinc_finish(0)

</stderr_txt>
]]>

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