Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:56:48 (2186248): wrapper (7.7.26015): starting
22:56:48 (2186248): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 22:56:48] Arguments: --nthreads 12
[2025-07-26 22:56:48] Threads: 12
[2025-07-26 22:56:48] Checking for CVMFS
[2025-07-26 22:56:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 22:56:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 22:56:48] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 22:56:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 22:56:48] 2.13.0.0 3229734 17792 332492 148797 2 65 21359141 40960000 11001 16776704 0 58399028 99.846 45025763 31347 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 22:56:48] CVMFS is ok
[2025-07-26 22:56:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 22:56:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 22:56:48] Further information can be found at the LHC@home message board.
[2025-07-26 22:56:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 22:56:48] Checking for apptainer binary...
[2025-07-26 22:56:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 22:56:48] Running /usr/bin/apptainer --version
[2025-07-26 22:56:48] apptainer version 1.4.1-1.el9
[2025-07-26 22:56:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 22:56:48] c6-5-7-4.aglt2.org
[2025-07-26 22:56:48] apptainer works
[2025-07-26 22:56:49] Set ATHENA_PROC_NUMBER=12
[2025-07-26 22:56:49] Set ATHENA_CORE_NUMBER=12
[2025-07-26 22:56:49] Starting ATLAS job with PandaID=6744422222
[2025-07-26 22:56:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 00:29:04]  *** The last 200 lines of the pilot log: ***
[2025-07-27 00:29:04]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-27 00:29:04]  is_altstaged=None
[2025-07-27 00:29:04]  is_tar=False
[2025-07-27 00:29:04]  lfn=log.45668900._000524.job.log.tgz.1
[2025-07-27 00:29:04]  mtime=0
[2025-07-27 00:29:04]  protocol_id=None
[2025-07-27 00:29:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 00:29:04]  replicas=None
[2025-07-27 00:29:04]  scope=mc23_13p6TeV
[2025-07-27 00:29:04]  status=None
[2025-07-27 00:29:04]  status_code=0
[2025-07-27 00:29:04]  storage_token=
[2025-07-27 00:29:04]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6744422222/log.45668900._000524.job.log.tgz.1
[2025-07-27 00:29:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b1/a3/log.45668900._000524.job.log.tgz.1
[2025-07-27 00:29:04]  workdir=None
[2025-07-27 00:29:04] ]
[2025-07-27 00:29:04] 2025-07-27 04:28:26,775 | INFO     | transferring file log.45668900._000524.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6744422222/log.45668900._000524.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 00:29:04] 2025-07-27 04:28:26,775 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6744422222/log.45668900._000524.job.log.tgz.1 /tmp/boinchome/slots/0/log.45668900._000524.job
[2025-07-27 00:29:04] 2025-07-27 04:28:26,797 | INFO     | adding to output.list: log.45668900._000524.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b1/a3/log.45668900._000524.job.log.tg
[2025-07-27 00:29:04] 2025-07-27 04:28:26,799 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 00:29:04] 2025-07-27 04:28:26,799 | INFO     | summary of transferred files:
[2025-07-27 00:29:04] 2025-07-27 04:28:26,799 | INFO     |  -- lfn=log.45668900._000524.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 00:29:04] 2025-07-27 04:28:26,800 | INFO     | stage-out finished correctly
[2025-07-27 00:29:04] 2025-07-27 04:28:26,914 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 00:29:04] 2025-07-27 04:28:27,009 | INFO     | job 6744422222 has state=finished
[2025-07-27 00:29:04] 2025-07-27 04:28:27,010 | INFO     | preparing for final server update for job 6744422222 in state='finished'
[2025-07-27 00:29:04] 2025-07-27 04:28:27,010 | INFO     | this job has now completed (state=finished)
[2025-07-27 00:29:04] 2025-07-27 04:28:27,010 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 00:29:04] 2025-07-27 04:28:27,011 | INFO     | log transfer has been attempted: DONE
[2025-07-27 00:29:04] 2025-07-27 04:28:27,011 | INFO     | job 6744422222 has finished - writing final server update
[2025-07-27 00:29:04] 2025-07-27 04:28:27,011 | INFO     | total number of processed events: 400 (read)
[2025-07-27 00:29:04] 2025-07-27 04:28:27,012 | INFO     | executing command: lscpu
[2025-07-27 00:29:04] 2025-07-27 04:28:27,058 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 00:29:04] 2025-07-27 04:28:30,776 | WARNING  | process 2196784 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 00:29:04] 2025-07-27 04:28:30,776 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6744422222/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 00:29:04] 2025-07-27 04:28:31,038 | INFO     | number of running child processes to parent process 2196784: 1
[2025-07-27 00:29:04] 2025-07-27 04:28:31,038 | INFO     | maximum number of monitored processes: 6
[2025-07-27 00:29:04] 2025-07-27 04:28:32,066 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 00:29:04] 2025-07-27 04:28:32,073 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2600.902928571429
[2025-07-27 00:29:04] 2025-07-27 04:28:32,082 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6744422222/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 00:29:04] 2025-07-27 04:28:32,083 | INFO     | extracted standard info from prmon json
[2025-07-27 00:29:04] 2025-07-27 04:28:32,083 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 00:29:04] 2025-07-27 04:28:32,083 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 00:29:04] 2025-07-27 04:28:32,083 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 00:29:04] 2025-07-27 04:28:32,083 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 00:29:04] 2025-07-27 04:28:32,085 | INFO     | fitting pss+swap vs Time
[2025-07-27 00:29:04] 2025-07-27 04:28:32,086 | INFO     | sum of square deviations: 177275882.0
[2025-07-27 00:29:04] 2025-07-27 04:28:32,086 | INFO     | sum of deviations: -8306287345.000001
[2025-07-27 00:29:04] 2025-07-27 04:28:32,086 | INFO     | mean x: 1753587857.0
[2025-07-27 00:29:04] 2025-07-27 04:28:32,086 | INFO     | mean y: 2805116.1325301207
[2025-07-27 00:29:04] 2025-07-27 04:28:32,086 | INFO     | -- intersect: 82167420294.55127
[2025-07-27 00:29:04] 2025-07-27 04:28:32,086 | INFO     | intersect: 82167420294.55127
[2025-07-27 00:29:04] 2025-07-27 04:28:32,086 | INFO     | chi2: 0.13474282487043526
[2025-07-27 00:29:04] 2025-07-27 04:28:32,087 | INFO     | -- intersect: 82167420294.55127
[2025-07-27 00:29:04] 2025-07-27 04:28:32,087 | INFO     | current memory leak: -46.86 B/s (using 83 data points, chi2=0.13)
[2025-07-27 00:29:04] 2025-07-27 04:28:32,087 | INFO     | could have reported an average CPU frequency of 2643 MHz (7 samples)
[2025-07-27 00:29:04] 2025-07-27 04:28:32,087 | INFO     | ..............................
[2025-07-27 00:29:04] 2025-07-27 04:28:32,087 | INFO     | . Timing measurements:
[2025-07-27 00:29:04] 2025-07-27 04:28:32,087 | INFO     | . get job = 0 s
[2025-07-27 00:29:04] 2025-07-27 04:28:32,087 | INFO     | . initial setup = 2 s
[2025-07-27 00:29:04] 2025-07-27 04:28:32,087 | INFO     | . payload setup = 7 s
[2025-07-27 00:29:04] 2025-07-27 04:28:32,088 | INFO     | . stage-in = 0 s
[2025-07-27 00:29:04] 2025-07-27 04:28:32,088 | INFO     | . payload execution = 5456 s
[2025-07-27 00:29:04] 2025-07-27 04:28:32,088 | INFO     | . stage-out = 0 s
[2025-07-27 00:29:04] 2025-07-27 04:28:32,088 | INFO     | . log creation = 0 s
[2025-07-27 00:29:04] 2025-07-27 04:28:32,088 | INFO     | ..............................
[2025-07-27 00:29:04] 2025-07-27 04:28:32,281 | INFO     | 
[2025-07-27 00:29:04] 2025-07-27 04:28:32,282 | INFO     | job summary report
[2025-07-27 00:29:04] 2025-07-27 04:28:32,282 | INFO     | --------------------------------------------------
[2025-07-27 00:29:04] 2025-07-27 04:28:32,282 | INFO     | PanDA job id: 6744422222
[2025-07-27 00:29:04] 2025-07-27 04:28:32,282 | INFO     | task id: 45668900
[2025-07-27 00:29:04] 2025-07-27 04:28:32,282 | INFO     | errors: (none)
[2025-07-27 00:29:04] 2025-07-27 04:28:32,282 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 00:29:04] 2025-07-27 04:28:32,282 | INFO     | pilot state: finished 
[2025-07-27 00:29:04] 2025-07-27 04:28:32,282 | INFO     | transexitcode: 0
[2025-07-27 00:29:04] 2025-07-27 04:28:32,282 | INFO     | exeerrorcode: 0
[2025-07-27 00:29:04] 2025-07-27 04:28:32,283 | INFO     | exeerrordiag: 
[2025-07-27 00:29:04] 2025-07-27 04:28:32,283 | INFO     | exitcode: 0
[2025-07-27 00:29:04] 2025-07-27 04:28:32,283 | INFO     | exitmsg: OK
[2025-07-27 00:29:04] 2025-07-27 04:28:32,283 | INFO     | cpuconsumptiontime: 57938 s
[2025-07-27 00:29:04] 2025-07-27 04:28:32,283 | INFO     | nevents: 400
[2025-07-27 00:29:04] 2025-07-27 04:28:32,283 | INFO     | neventsw: 0
[2025-07-27 00:29:04] 2025-07-27 04:28:32,283 | INFO     | pid: 2196784
[2025-07-27 00:29:04] 2025-07-27 04:28:32,283 | INFO     | pgrp: 2196784
[2025-07-27 00:29:04] 2025-07-27 04:28:32,283 | INFO     | corecount: 12
[2025-07-27 00:29:04] 2025-07-27 04:28:32,283 | INFO     | event service: False
[2025-07-27 00:29:04] 2025-07-27 04:28:32,283 | INFO     | sizes: {0: 2396559, 1: 2397415, 6: 2397677, 12: 2397705, 5467: 2424138, 5469: 2433320, 5474: 2433458}
[2025-07-27 00:29:04] 2025-07-27 04:28:32,283 | INFO     | --------------------------------------------------
[2025-07-27 00:29:04] 2025-07-27 04:28:32,284 | INFO     | 
[2025-07-27 00:29:04] 2025-07-27 04:28:32,284 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 00:29:04] 2025-07-27 04:28:32,308 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 00:29:04] 2025-07-27 04:28:32,308 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 00:29:04] 2025-07-27 04:28:32,309 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 00:29:04] 2025-07-27 04:28:32,309 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 00:29:04] 2025-07-27 04:28:32,309 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 00:29:04] 2025-07-27 04:28:32,309 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 00:29:04] 2025-07-27 04:28:32,309 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 00:29:04] 2025-07-27 04:28:32,309 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 00:29:04] 2025-07-27 04:28:32,309 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 00:29:04] 2025-07-27 04:28:32,309 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 00:29:04] 2025-07-27 04:28:32,309 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 00:29:04] 2025-07-27 04:28:32,309 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 00:29:04] 2025-07-27 04:28:32,309 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 00:29:04] 2025-07-27 04:28:32,309 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 00:29:04] 2025-07-27 04:28:32,309 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 00:29:04] 2025-07-27 04:28:32,310 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 00:29:04] 2025-07-27 04:28:32,310 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 00:29:04] 2025-07-27 04:28:32,310 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 00:29:04] 2025-07-27 04:28:32,310 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 00:29:04] 2025-07-27 04:28:32,310 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 00:29:04] 2025-07-27 04:28:32,310 | INFO     | job 6744422222 has completed (purged errors)
[2025-07-27 00:29:04] 2025-07-27 04:28:32,310 | INFO     | overall cleanup function is called
[2025-07-27 00:29:04] 2025-07-27 04:28:33,320 | INFO     | --- collectZombieJob: --- 10, [2196784]
[2025-07-27 00:29:04] 2025-07-27 04:28:33,320 | INFO     | zombie collector waiting for pid 2196784
[2025-07-27 00:29:04] 2025-07-27 04:28:33,320 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 00:29:04] 2025-07-27 04:28:33,320 | INFO     | collected zombie processes
[2025-07-27 00:29:04] 2025-07-27 04:28:33,320 | INFO     | will attempt to kill all subprocesses of pid=2196784
[2025-07-27 00:29:04] 2025-07-27 04:28:33,595 | INFO     | process IDs to be killed: [2196784] (in reverse order)
[2025-07-27 00:29:04] 2025-07-27 04:28:33,701 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 00:29:04] 2025-07-27 04:28:33,701 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 00:29:04] 2025-07-27 04:28:33,712 | INFO     | did not find any defunct processes belonging to 2196784
[2025-07-27 00:29:04] 2025-07-27 04:28:33,723 | INFO     | did not find any defunct processes belonging to 2196784
[2025-07-27 00:29:04] 2025-07-27 04:28:33,723 | INFO     | ready for new job
[2025-07-27 00:29:04] 2025-07-27 04:28:33,723 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 00:29:04] 2025-07-27 04:28:33,725 | INFO     | ***************************************
[2025-07-27 00:29:04] 2025-07-27 04:28:33,725 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 00:29:04] 2025-07-27 04:28:33,725 | INFO     | ***************************************
[2025-07-27 00:29:04] 2025-07-27 04:28:33,725 | INFO     | 
[2025-07-27 00:29:04] 2025-07-27 04:28:33,728 | INFO     | architecture information:
[2025-07-27 00:29:04] 2025-07-27 04:28:33,729 | INFO     | executing command: cat /etc/os-release
[2025-07-27 00:29:04] 2025-07-27 04:28:33,748 | INFO     | cat /etc/os-release:
[2025-07-27 00:29:04] NAME="CentOS Linux"
[2025-07-27 00:29:04] VERSION="7 (Core)"
[2025-07-27 00:29:04] ID="centos"
[2025-07-27 00:29:04] ID_LIKE="rhel fedora"
[2025-07-27 00:29:04] VERSION_ID="7"
[2025-07-27 00:29:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 00:29:04] ANSI_COLOR="0;31"
[2025-07-27 00:29:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 00:29:04] HOME_URL="https://www.centos.org/"
[2025-07-27 00:29:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 00:29:04] 
[2025-07-27 00:29:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 00:29:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 00:29:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 00:29:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 00:29:04] 
[2025-07-27 00:29:04] 2025-07-27 04:28:33,748 | INFO     | ***************************************
[2025-07-27 00:29:04] 2025-07-27 04:28:34,251 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 00:29:04] 2025-07-27 04:28:34,270 | INFO     | sufficient remaining disk space (75278319616 B)
[2025-07-27 00:29:04] 2025-07-27 04:28:34,270 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 00:29:04] 2025-07-27 04:28:34,270 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 00:29:04] 2025-07-27 04:28:34,270 | INFO     | update_server=False
[2025-07-27 00:29:04] 2025-07-27 04:28:34,270 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 00:29:04] 2025-07-27 04:28:34,307 | INFO     | all payload control threads have been joined
[2025-07-27 00:29:04] 2025-07-27 04:28:34,546 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 00:29:04] 2025-07-27 04:28:34,547 | INFO     | aborting loop
[2025-07-27 00:29:04] 2025-07-27 04:28:34,930 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 00:29:04] 2025-07-27 04:28:35,104 | INFO     | all data control threads have been joined
[2025-07-27 00:29:04] 2025-07-27 04:28:35,275 | INFO     | [job] retrieve thread has finished
[2025-07-27 00:29:04] 2025-07-27 04:28:35,312 | INFO     | [payload] control thread has finished
[2025-07-27 00:29:04] 2025-07-27 04:28:35,443 | INFO     | [job] validate thread has finished
[2025-07-27 00:29:04] 2025-07-27 04:28:35,552 | INFO     | [job] job monitor thread has finished
[2025-07-27 00:29:04] 2025-07-27 04:28:35,557 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 00:29:04] 2025-07-27 04:28:35,777 | INFO     | [payload] validate_post thread has finished
[2025-07-27 00:29:04] 2025-07-27 04:28:35,877 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 00:29:04] 2025-07-27 04:28:35,908 | INFO     | all job control threads have been joined
[2025-07-27 00:29:04] 2025-07-27 04:28:36,109 | INFO     | [data] control thread has finished
[2025-07-27 00:29:04] 2025-07-27 04:28:36,411 | INFO     | [data] copytool_in thread has finished
[2025-07-27 00:29:04] 2025-07-27 04:28:36,445 | INFO     | [payload] failed_post thread has finished
[2025-07-27 00:29:04] 2025-07-27 04:28:36,638 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 00:29:04] 2025-07-27 04:28:36,638 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 00:29:04] 2025-07-27 04:28:36,913 | INFO     | [job] control thread has finished
[2025-07-27 00:29:04] 2025-07-27 04:28:36,935 | INFO     | [data] copytool_out thread has finished
[2025-07-27 00:29:04] 2025-07-27 04:28:37,188 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 00:29:04] 2025-07-27 04:28:37,519 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 00:29:04] 2025-07-27 04:28:38,193 | INFO     | [job] queue monitor thread has finished
[2025-07-27 00:29:04] 2025-07-27 04:28:41,525 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 00:29:04] 2025-07-27 04:28:41,843 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139792927962944)>', '<ExcThread(monitor, started 139792427759360)>']
[2025-07-27 00:29:04] 2025-07-27 04:28:46,868 | INFO     | all workflow threads have been joined
[2025-07-27 00:29:04] 2025-07-27 04:28:46,868 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 00:29:04] 2025-07-27 04:28:46,868 | INFO     | traces error code: 0
[2025-07-27 00:29:04] 2025-07-27 04:28:46,869 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 00:29:04] 2025-07-27 04:29:04,098 | INFO     | PID=2189827 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 00:29:04] 2025-07-27 04:29:04,099 | INFO     | .. there are 14 such processes running
[2025-07-27 00:29:04] 2025-07-27 04:29:04,100 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 00:29:04] 2025-07-27 04:29:04,100 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 00:29:04] 2025-07-27 04:29:04,100 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 00:29:04] 2025-07-27 04:29:04,100 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 00:29:04] 2025-07-27 04:29:04,100 | INFO     | [monitor] control thread has ended
[2025-07-27 00:29:04] 2025-07-27 04:29:04,274 [wrapper] ==== pilot stdout END ====
[2025-07-27 00:29:04] 2025-07-27 04:29:04,277 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 00:29:04] 2025-07-27 04:29:04,280 [wrapper] pilotpid: 2189827
[2025-07-27 00:29:04] 2025-07-27 04:29:04,283 [wrapper] Pilot exit status: 0
[2025-07-27 00:29:04] 2025-07-27 04:29:04,301 [wrapper] pandaids: 6744422222
[2025-07-27 00:29:04] 2025-07-27 04:29:04,389 [wrapper] cleanup supervisor_pilot 2357813 2189828
[2025-07-27 00:29:04] 2025-07-27 04:29:04,394 [wrapper] Test setup, not cleaning
[2025-07-27 00:29:04] 2025-07-27 04:29:04,397 [wrapper] apfmon messages muted
[2025-07-27 00:29:04] 2025-07-27 04:29:04,400 [wrapper] ==== wrapper stdout END ====
[2025-07-27 00:29:04] 2025-07-27 04:29:04,403 [wrapper] ==== wrapper stderr END ====
[2025-07-27 00:29:04]  *** Error codes and diagnostics ***
[2025-07-27 00:29:04]     "exeErrorCode": 0,
[2025-07-27 00:29:04]     "exeErrorDiag": "",
[2025-07-27 00:29:04]     "pilotErrorCode": 0,
[2025-07-27 00:29:04]     "pilotErrorDiag": "",
[2025-07-27 00:29:04]  *** Listing of results directory ***
[2025-07-27 00:29:04] total 461040
[2025-07-27 00:29:04] -rw-r--r--. 1 boincer umatlas    530466 Jul 24 03:22 pilot3.tar.gz
[2025-07-27 00:29:04] -rwx------. 1 boincer umatlas     36292 Jul 24 03:42 runpilot2-wrapper.sh
[2025-07-27 00:29:04] -rw-r--r--. 1 boincer umatlas      5112 Jul 24 03:42 queuedata.json
[2025-07-27 00:29:04] -rw-r--r--. 1 boincer umatlas       100 Jul 26 22:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 00:29:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 22:56 run_atlas
[2025-07-27 00:29:04] -rw-r--r--. 1 boincer umatlas       105 Jul 26 22:56 job.xml
[2025-07-27 00:29:04] -rw-r--r--. 2 boincer umatlas 275539080 Jul 26 22:56 EVNT.45668898._000010.pool.root.1
[2025-07-27 00:29:04] -rw-r--r--. 2 boincer umatlas    542875 Jul 26 22:56 input.tar.gz
[2025-07-27 00:29:04] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 22:56 start_atlas.sh
[2025-07-27 00:29:04] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 22:56 shared
[2025-07-27 00:29:04] -rw-r--r--. 1 boincer umatlas         0 Jul 26 22:56 boinc_lockfile
[2025-07-27 00:29:04] -rw-r--r--. 1 boincer umatlas      2536 Jul 26 22:56 pandaJob.out
[2025-07-27 00:29:04] -rw-------. 1 boincer umatlas    980117 Jul 26 22:56 agis_schedconf.cvmfs.json
[2025-07-27 00:29:04] -rw-------. 1 boincer umatlas   1593052 Jul 26 22:57 agis_ddmendpoints.agis.ALL.json
[2025-07-27 00:29:04] drwx------. 4 boincer umatlas      4096 Jul 26 22:57 pilot3
[2025-07-27 00:29:04] -rw-r--r--. 1 boincer umatlas      6839 Jul 27 00:22 init_data.xml
[2025-07-27 00:29:04] -rw-r--r--. 1 boincer umatlas       529 Jul 27 00:27 boinc_task_state.xml
[2025-07-27 00:29:04] -rw-------. 1 boincer umatlas 190887544 Jul 27 00:27 HITS.45668900._000524.pool.root.1
[2025-07-27 00:29:04] -rw-------. 1 boincer umatlas      1035 Jul 27 00:28 memory_monitor_summary.json
[2025-07-27 00:29:04] -rw-------. 1 boincer umatlas    375429 Jul 27 00:28 log.45668900._000524.job.log.tgz.1
[2025-07-27 00:29:04] -rw-------. 1 boincer umatlas      7803 Jul 27 00:28 heartbeat.json
[2025-07-27 00:29:04] -rw-r--r--. 1 boincer umatlas        27 Jul 27 00:29 wrapper_checkpoint.txt
[2025-07-27 00:29:04] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 00:29 boinc_mmap_file
[2025-07-27 00:29:04] -rw-------. 1 boincer umatlas        95 Jul 27 00:29 pilot_heartbeat.json
[2025-07-27 00:29:04] -rw-------. 1 boincer umatlas       823 Jul 27 00:29 pilotlog.txt
[2025-07-27 00:29:04] -rw-------. 1 boincer umatlas    527113 Jul 27 00:29 log.45668900._000524.job.log.1
[2025-07-27 00:29:04] -rw-------. 1 boincer umatlas       357 Jul 27 00:29 output.list
[2025-07-27 00:29:04] -rw-r--r--. 1 boincer umatlas       620 Jul 27 00:29 runtime_log
[2025-07-27 00:29:04] -rw-------. 1 boincer umatlas    921600 Jul 27 00:29 result.tar.gz
[2025-07-27 00:29:04] -rw-------. 1 boincer umatlas       654 Jul 27 00:29 yL8MDmKm5y7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmF6LLDmiRXl8m.diag
[2025-07-27 00:29:04] -rw-r--r--. 1 boincer umatlas      8662 Jul 27 00:29 runtime_log.err
[2025-07-27 00:29:04] -rw-r--r--. 1 boincer umatlas     21469 Jul 27 00:29 stderr.txt
[2025-07-27 00:29:04] HITS file was successfully produced:
[2025-07-27 00:29:04] -rw-------. 1 boincer umatlas 190887544 Jul 27 00:27 shared/HITS.pool.root.1
[2025-07-27 00:29:04]  *** Contents of shared directory: ***
[2025-07-27 00:29:04] total 456952
[2025-07-27 00:29:04] -rw-r--r--. 2 boincer umatlas 275539080 Jul 26 22:56 ATLAS.root_0
[2025-07-27 00:29:04] -rw-r--r--. 2 boincer umatlas    542875 Jul 26 22:56 input.tar.gz
[2025-07-27 00:29:04] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 22:56 start_atlas.sh
[2025-07-27 00:29:04] -rw-------. 1 boincer umatlas 190887544 Jul 27 00:27 HITS.pool.root.1
[2025-07-27 00:29:04] -rw-------. 1 boincer umatlas    921600 Jul 27 00:29 result.tar.gz
00:29:06 (2186248): run_atlas exited; CPU time 58006.504765
00:29:06 (2186248): called boinc_finish(0)

</stderr_txt>
]]>

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