Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
20:03:01 (1864140): wrapper (7.7.26015): starting
20:03:01 (1864140): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 20:03:01] Arguments: --nthreads 12
[2025-07-27 20:03:01] Threads: 12
[2025-07-27 20:03:01] Checking for CVMFS
[2025-07-27 20:03:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 20:03:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 20:03:01] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 20:03:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 20:03:01] 2.13.1.0 50093 8087 75004 148822 1 188 3458159 4096001 1815 130560 0 16280531 99.996 294071 285 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-07-27 20:03:01] CVMFS is ok
[2025-07-27 20:03:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 20:03:01] Checking for apptainer binary...
[2025-07-27 20:03:01] apptainer is not installed, using version from CVMFS
[2025-07-27 20:03:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 20:03:01] ryzen7
[2025-07-27 20:03:01] apptainer works
[2025-07-27 20:03:01] Set ATHENA_PROC_NUMBER=12
[2025-07-27 20:03:01] Set ATHENA_CORE_NUMBER=12
[2025-07-27 20:03:01] Starting ATLAS job with PandaID=6745503269
[2025-07-27 20:03:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 21:33:16]  *** The last 200 lines of the pilot log: ***
[2025-07-27 21:33:16]  scope=mc23_13p6TeV
[2025-07-27 21:33:16]  status=None
[2025-07-27 21:33:16]  status_code=0
[2025-07-27 21:33:16]  storage_token=
[2025-07-27 21:33:16]  surl=/opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6745503269/log.45743349._044073.job.log.tgz.1
[2025-07-27 21:33:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/7a/log.45743349._044073.job.log.tgz.1
[2025-07-27 21:33:16]  workdir=None
[2025-07-27 21:33:16] ]
[2025-07-27 21:33:16] 2025-07-27 21:32:37,008 | INFO     | transferring file log.45743349._044073.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6745503269/log.45743349._044073.job.log.tgz.1 t
[2025-07-27 21:33:16] 2025-07-27 21:32:37,008 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6745503269/log.45743349._044073.job.log.tgz.1 /opt/boinc/instance_home
[2025-07-27 21:33:16] 2025-07-27 21:32:37,014 | INFO     | adding to output.list: log.45743349._044073.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/7a/log.45743349._044073.job.log.tg
[2025-07-27 21:33:16] 2025-07-27 21:32:37,015 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 21:33:16] 2025-07-27 21:32:37,015 | INFO     | summary of transferred files:
[2025-07-27 21:33:16] 2025-07-27 21:32:37,015 | INFO     |  -- lfn=log.45743349._044073.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 21:33:16] 2025-07-27 21:32:37,015 | INFO     | stage-out finished correctly
[2025-07-27 21:33:16] 2025-07-27 21:32:37,822 | WARNING  | process 1874408 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 21:33:16] 2025-07-27 21:32:37,822 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6745503269/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 21:33:16] 2025-07-27 21:32:37,869 | INFO     | number of running child processes to parent process 1874408: 1
[2025-07-27 21:33:16] 2025-07-27 21:32:37,869 | INFO     | maximum number of monitored processes: 6
[2025-07-27 21:33:16] 2025-07-27 21:32:40,371 | INFO     | monitor loop #398: job 0:6745503269 is in state 'finished'
[2025-07-27 21:33:16] 2025-07-27 21:32:40,371 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 21:33:16] 2025-07-27 21:32:40,453 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 21:33:16] 2025-07-27 21:32:42,275 | INFO     | PID=1867826 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 21:33:16] 2025-07-27 21:32:42,275 | INFO     | .. there are 3 such processes running
[2025-07-27 21:33:16] 2025-07-27 21:32:42,341 | INFO     | job 6745503269 has state=finished
[2025-07-27 21:33:16] 2025-07-27 21:32:42,342 | INFO     | preparing for final server update for job 6745503269 in state='finished'
[2025-07-27 21:33:16] 2025-07-27 21:32:42,342 | INFO     | this job has now completed (state=finished)
[2025-07-27 21:33:16] 2025-07-27 21:32:42,342 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 21:33:16] 2025-07-27 21:32:42,342 | INFO     | log transfer has been attempted: DONE
[2025-07-27 21:33:16] 2025-07-27 21:32:42,342 | INFO     | job 6745503269 has finished - writing final server update
[2025-07-27 21:33:16] 2025-07-27 21:32:42,342 | INFO     | total number of processed events: 400 (read)
[2025-07-27 21:33:16] 2025-07-27 21:32:42,342 | INFO     | executing command: lscpu
[2025-07-27 21:33:16] 2025-07-27 21:32:42,372 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 21:33:16] 2025-07-27 21:32:42,874 | INFO     | monitor loop #399: job 0:6745503269 is in state 'finished'
[2025-07-27 21:33:16] 2025-07-27 21:32:42,874 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 21:33:16] 2025-07-27 21:32:43,726 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 21:33:16] 2025-07-27 21:32:43,727 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3372.3995625000002
[2025-07-27 21:33:16] 2025-07-27 21:32:43,728 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6745503269/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 21:33:16] 2025-07-27 21:32:43,728 | INFO     | extracted standard info from prmon json
[2025-07-27 21:33:16] 2025-07-27 21:32:43,728 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 21:33:16] 2025-07-27 21:32:43,728 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 21:33:16] 2025-07-27 21:32:43,728 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 21:33:16] 2025-07-27 21:32:43,728 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 21:33:16] 2025-07-27 21:32:43,729 | INFO     | fitting pss+swap vs Time
[2025-07-27 21:33:16] 2025-07-27 21:32:43,729 | INFO     | sum of square deviations: 164765880.0
[2025-07-27 21:33:16] 2025-07-27 21:32:43,729 | INFO     | sum of deviations: 1855517032.0
[2025-07-27 21:33:16] 2025-07-27 21:32:43,729 | INFO     | mean x: 1753649353.0
[2025-07-27 21:33:16] 2025-07-27 21:32:43,729 | INFO     | mean y: 2676969.2098765434
[2025-07-27 21:33:16] 2025-07-27 21:32:43,729 | INFO     | -- intersect: -19746109870.925232
[2025-07-27 21:33:16] 2025-07-27 21:32:43,729 | INFO     | intersect: -19746109870.925232
[2025-07-27 21:33:16] 2025-07-27 21:32:43,730 | INFO     | chi2: 0.05377891476412853
[2025-07-27 21:33:16] 2025-07-27 21:32:43,730 | INFO     | -- intersect: -19746109870.925232
[2025-07-27 21:33:16] 2025-07-27 21:32:43,730 | INFO     | current memory leak: 11.26 B/s (using 81 data points, chi2=0.05)
[2025-07-27 21:33:16] 2025-07-27 21:32:43,730 | INFO     | could have reported an average CPU frequency of 3988 MHz (6 samples)
[2025-07-27 21:33:16] 2025-07-27 21:32:43,730 | INFO     | ..............................
[2025-07-27 21:33:16] 2025-07-27 21:32:43,730 | INFO     | . Timing measurements:
[2025-07-27 21:33:16] 2025-07-27 21:32:43,730 | INFO     | . get job = 0 s
[2025-07-27 21:33:16] 2025-07-27 21:32:43,730 | INFO     | . initial setup = 1 s
[2025-07-27 21:33:16] 2025-07-27 21:32:43,730 | INFO     | . payload setup = 3 s
[2025-07-27 21:33:16] 2025-07-27 21:32:43,730 | INFO     | . stage-in = 0 s
[2025-07-27 21:33:16] 2025-07-27 21:32:43,730 | INFO     | . payload execution = 5348 s
[2025-07-27 21:33:16] 2025-07-27 21:32:43,730 | INFO     | . stage-out = 0 s
[2025-07-27 21:33:16] 2025-07-27 21:32:43,730 | INFO     | . log creation = 0 s
[2025-07-27 21:33:16] 2025-07-27 21:32:43,730 | INFO     | ..............................
[2025-07-27 21:33:16] 2025-07-27 21:32:43,760 | INFO     | 
[2025-07-27 21:33:16] 2025-07-27 21:32:43,760 | INFO     | job summary report
[2025-07-27 21:33:16] 2025-07-27 21:32:43,760 | INFO     | --------------------------------------------------
[2025-07-27 21:33:16] 2025-07-27 21:32:43,760 | INFO     | PanDA job id: 6745503269
[2025-07-27 21:33:16] 2025-07-27 21:32:43,760 | INFO     | task id: 45743349
[2025-07-27 21:33:16] 2025-07-27 21:32:43,760 | INFO     | errors: (none)
[2025-07-27 21:33:16] 2025-07-27 21:32:43,760 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 21:33:16] 2025-07-27 21:32:43,760 | INFO     | pilot state: finished 
[2025-07-27 21:33:16] 2025-07-27 21:32:43,760 | INFO     | transexitcode: 0
[2025-07-27 21:33:16] 2025-07-27 21:32:43,760 | INFO     | exeerrorcode: 0
[2025-07-27 21:33:16] 2025-07-27 21:32:43,760 | INFO     | exeerrordiag: 
[2025-07-27 21:33:16] 2025-07-27 21:32:43,760 | INFO     | exitcode: 0
[2025-07-27 21:33:16] 2025-07-27 21:32:43,761 | INFO     | exitmsg: OK
[2025-07-27 21:33:16] 2025-07-27 21:32:43,761 | INFO     | cpuconsumptiontime: 27954 s
[2025-07-27 21:33:16] 2025-07-27 21:32:43,761 | INFO     | nevents: 400
[2025-07-27 21:33:16] 2025-07-27 21:32:43,761 | INFO     | neventsw: 0
[2025-07-27 21:33:16] 2025-07-27 21:32:43,761 | INFO     | pid: 1874408
[2025-07-27 21:33:16] 2025-07-27 21:32:43,761 | INFO     | pgrp: 1874408
[2025-07-27 21:33:16] 2025-07-27 21:32:43,761 | INFO     | corecount: 12
[2025-07-27 21:33:16] 2025-07-27 21:32:43,761 | INFO     | event service: False
[2025-07-27 21:33:16] 2025-07-27 21:32:43,761 | INFO     | sizes: {0: 2397492, 3: 2397754, 11: 2397782, 5356: 2424412, 5357: 2433456, 5360: 2433512, 5363: 2433834}
[2025-07-27 21:33:16] 2025-07-27 21:32:43,761 | INFO     | --------------------------------------------------
[2025-07-27 21:33:16] 2025-07-27 21:32:43,761 | INFO     | 
[2025-07-27 21:33:16] 2025-07-27 21:32:43,761 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-07-27 21:33:16] 2025-07-27 21:32:43,768 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 21:33:16] 2025-07-27 21:32:43,768 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 21:33:16] 2025-07-27 21:32:43,768 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 21:33:16] 2025-07-27 21:32:43,768 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 21:33:16] 2025-07-27 21:32:43,768 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 21:33:16] 2025-07-27 21:32:43,768 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 21:33:16] 2025-07-27 21:32:43,768 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 21:33:16] 2025-07-27 21:32:43,768 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 21:33:16] 2025-07-27 21:32:43,768 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 21:33:16] 2025-07-27 21:32:43,768 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 21:33:16] 2025-07-27 21:32:43,768 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 21:33:16] 2025-07-27 21:32:43,768 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 21:33:16] 2025-07-27 21:32:43,768 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 21:33:16] 2025-07-27 21:32:43,768 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 21:33:16] 2025-07-27 21:32:43,768 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 21:33:16] 2025-07-27 21:32:43,768 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 21:33:16] 2025-07-27 21:32:43,768 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 21:33:16] 2025-07-27 21:32:43,768 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 21:33:16] 2025-07-27 21:32:43,768 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 21:33:16] 2025-07-27 21:32:43,768 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 21:33:16] 2025-07-27 21:32:43,769 | INFO     | job 6745503269 has completed (purged errors)
[2025-07-27 21:33:16] 2025-07-27 21:32:43,769 | INFO     | overall cleanup function is called
[2025-07-27 21:33:16] 2025-07-27 21:32:44,775 | INFO     | --- collectZombieJob: --- 10, [1874408]
[2025-07-27 21:33:16] 2025-07-27 21:32:44,775 | INFO     | zombie collector waiting for pid 1874408
[2025-07-27 21:33:16] 2025-07-27 21:32:44,775 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 21:33:16] 2025-07-27 21:32:44,775 | INFO     | collected zombie processes
[2025-07-27 21:33:16] 2025-07-27 21:32:44,775 | INFO     | will attempt to kill all subprocesses of pid=1874408
[2025-07-27 21:33:16] 2025-07-27 21:32:44,823 | INFO     | process IDs to be killed: [1874408] (in reverse order)
[2025-07-27 21:33:16] 2025-07-27 21:32:44,845 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 21:33:16] 2025-07-27 21:32:44,845 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 21:33:16] 2025-07-27 21:32:44,847 | INFO     | did not find any defunct processes belonging to 1874408
[2025-07-27 21:33:16] 2025-07-27 21:32:44,848 | INFO     | did not find any defunct processes belonging to 1874408
[2025-07-27 21:33:16] 2025-07-27 21:32:44,848 | INFO     | ready for new job
[2025-07-27 21:33:16] 2025-07-27 21:32:44,848 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 21:33:16] 2025-07-27 21:32:44,849 | INFO     | ***************************************
[2025-07-27 21:33:16] 2025-07-27 21:32:44,849 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 21:33:16] 2025-07-27 21:32:44,849 | INFO     | ***************************************
[2025-07-27 21:33:16] 2025-07-27 21:32:44,849 | INFO     | 
[2025-07-27 21:33:16] 2025-07-27 21:32:44,866 | INFO     | architecture information:
[2025-07-27 21:33:16] 2025-07-27 21:32:44,866 | INFO     | executing command: cat /etc/os-release
[2025-07-27 21:33:16] 2025-07-27 21:32:44,872 | INFO     | cat /etc/os-release:
[2025-07-27 21:33:16] NAME="CentOS Linux"
[2025-07-27 21:33:16] VERSION="7 (Core)"
[2025-07-27 21:33:16] ID="centos"
[2025-07-27 21:33:16] ID_LIKE="rhel fedora"
[2025-07-27 21:33:16] VERSION_ID="7"
[2025-07-27 21:33:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 21:33:16] ANSI_COLOR="0;31"
[2025-07-27 21:33:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 21:33:16] HOME_URL="https://www.centos.org/"
[2025-07-27 21:33:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 21:33:16] 
[2025-07-27 21:33:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 21:33:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 21:33:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 21:33:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 21:33:16] 
[2025-07-27 21:33:16] 2025-07-27 21:32:44,872 | INFO     | ***************************************
[2025-07-27 21:33:16] 2025-07-27 21:32:45,375 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-07-27 21:33:16] 2025-07-27 21:32:45,380 | INFO     | sufficient remaining disk space (150437101568 B)
[2025-07-27 21:33:16] 2025-07-27 21:32:45,380 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 21:33:16] 2025-07-27 21:32:45,380 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 21:33:16] 2025-07-27 21:32:45,380 | INFO     | update_server=False
[2025-07-27 21:33:16] 2025-07-27 21:32:45,380 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 21:33:16] 2025-07-27 21:32:45,381 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 21:33:16] 2025-07-27 21:32:45,381 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 21:33:16] 2025-07-27 21:32:46,346 | INFO     | all data control threads have been joined
[2025-07-27 21:33:16] 2025-07-27 21:32:46,382 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 21:33:16] 2025-07-27 21:32:46,382 | INFO     | aborting loop
[2025-07-27 21:33:16] 2025-07-27 21:32:46,386 | INFO     | [job] retrieve thread has finished
[2025-07-27 21:33:16] 2025-07-27 21:32:46,386 | INFO     | [job] queue monitor thread has finished
[2025-07-27 21:33:16] 2025-07-27 21:32:46,490 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 21:33:16] 2025-07-27 21:32:46,551 | INFO     | [payload] validate_post thread has finished
[2025-07-27 21:33:16] 2025-07-27 21:32:46,594 | INFO     | [data] copytool_in thread has finished
[2025-07-27 21:33:16] 2025-07-27 21:32:46,625 | INFO     | all payload control threads have been joined
[2025-07-27 21:33:16] 2025-07-27 21:32:46,631 | INFO     | all job control threads have been joined
[2025-07-27 21:33:16] 2025-07-27 21:32:46,918 | INFO     | [job] validate thread has finished
[2025-07-27 21:33:16] 2025-07-27 21:32:47,351 | INFO     | [data] control thread has finished
[2025-07-27 21:33:16] 2025-07-27 21:32:47,366 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 21:33:16] 2025-07-27 21:32:47,386 | INFO     | [data] copytool_out thread has finished
[2025-07-27 21:33:16] 2025-07-27 21:32:47,387 | INFO     | [job] job monitor thread has finished
[2025-07-27 21:33:16] 2025-07-27 21:32:47,414 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 21:33:16] 2025-07-27 21:32:47,630 | INFO     | [payload] control thread has finished
[2025-07-27 21:33:16] 2025-07-27 21:32:47,637 | INFO     | [job] control thread has finished
[2025-07-27 21:33:16] 2025-07-27 21:32:47,768 | INFO     | [payload] failed_post thread has finished
[2025-07-27 21:33:16] 2025-07-27 21:32:47,820 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 21:33:16] 2025-07-27 21:32:50,494 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 21:33:16] 2025-07-27 21:32:55,874 | INFO     | job.realtimelogging is not enabled
[2025-07-27 21:33:16] 2025-07-27 21:32:56,878 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 21:33:16] 2025-07-27 21:32:58,826 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139768714811200)>', '<ExcThread(monitor, started 139768134350592)>']
[2025-07-27 21:33:16] 2025-07-27 21:33:03,833 | INFO     | all workflow threads have been joined
[2025-07-27 21:33:16] 2025-07-27 21:33:03,833 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 21:33:16] 2025-07-27 21:33:03,833 | INFO     | traces error code: 0
[2025-07-27 21:33:16] 2025-07-27 21:33:03,833 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 21:33:16] 2025-07-27 21:33:06,025 [wrapper] supervise_pilot (15 min periods counter: 7)
[2025-07-27 21:33:16] 2025-07-27 21:33:16,389 | INFO     | PID=1867826 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 21:33:16] 2025-07-27 21:33:16,389 | INFO     | .. there are 3 such processes running
[2025-07-27 21:33:16] 2025-07-27 21:33:16,390 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 21:33:16] 2025-07-27 21:33:16,390 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 21:33:16] 2025-07-27 21:33:16,390 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 21:33:16] 2025-07-27 21:33:16,390 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 21:33:16] 2025-07-27 21:33:16,390 | INFO     | [monitor] control thread has ended
[2025-07-27 21:33:16] 2025-07-27 21:33:16,440 [wrapper] ==== pilot stdout END ====
[2025-07-27 21:33:16] 2025-07-27 21:33:16,442 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 21:33:16] 2025-07-27 21:33:16,444 [wrapper] pilotpid: 1867826
[2025-07-27 21:33:16] 2025-07-27 21:33:16,445 [wrapper] Pilot exit status: 0
[2025-07-27 21:33:16] 2025-07-27 21:33:16,451 [wrapper] pandaids: 6745503269
[2025-07-27 21:33:16] 2025-07-27 21:33:16,469 [wrapper] cleanup supervisor_pilot 1936323 1867827
[2025-07-27 21:33:16] 2025-07-27 21:33:16,471 [wrapper] Test setup, not cleaning
[2025-07-27 21:33:16] 2025-07-27 21:33:16,472 [wrapper] apfmon messages muted
[2025-07-27 21:33:16] 2025-07-27 21:33:16,474 [wrapper] ==== wrapper stdout END ====
[2025-07-27 21:33:16] 2025-07-27 21:33:16,475 [wrapper] ==== wrapper stderr END ====
[2025-07-27 21:33:16]  *** Error codes and diagnostics ***
[2025-07-27 21:33:16]     "exeErrorCode": 0,
[2025-07-27 21:33:16]     "exeErrorDiag": "",
[2025-07-27 21:33:16]     "pilotErrorCode": 0,
[2025-07-27 21:33:16]     "pilotErrorDiag": "",
[2025-07-27 21:33:16]  *** Listing of results directory ***
[2025-07-27 21:33:16] total 392504
[2025-07-27 21:33:16] -rw-r--r-- 1 boinc boinc    530466 Jul 26 20:19 pilot3.tar.gz
[2025-07-27 21:33:16] -rw-r--r-- 1 boinc boinc      5112 Jul 26 20:35 queuedata.json
[2025-07-27 21:33:16] -rwx------ 1 boinc boinc     36292 Jul 26 20:36 runpilot2-wrapper.sh
[2025-07-27 21:33:16] -rw-rw-r-- 1 boinc boinc       100 Jul 27 20:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 21:33:16] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 20:03 run_atlas
[2025-07-27 21:33:16] -rw-rw-r-- 1 boinc boinc       105 Jul 27 20:03 job.xml
[2025-07-27 21:33:16] -rw-rw-r-- 1 boinc boinc      9702 Jul 27 20:03 init_data.xml
[2025-07-27 21:33:16] -rw-r--r-- 2 boinc boinc 186029154 Jul 27 20:03 EVNT.45743347._002518.pool.root.1
[2025-07-27 21:33:16] -rw-r--r-- 2 boinc boinc     15095 Jul 27 20:03 start_atlas.sh
[2025-07-27 21:33:16] drwxrwx--x 2 boinc boinc      4096 Jul 27 20:03 shared
[2025-07-27 21:33:16] -rw-r--r-- 2 boinc boinc    542885 Jul 27 20:03 input.tar.gz
[2025-07-27 21:33:16] -rw-rw-r-- 1 boinc boinc         0 Jul 27 20:03 boinc_lockfile
[2025-07-27 21:33:16] -rw-rw-r-- 1 boinc boinc      2560 Jul 27 20:03 pandaJob.out
[2025-07-27 21:33:16] -rw------- 1 boinc boinc    980125 Jul 27 20:03 agis_schedconf.cvmfs.json
[2025-07-27 21:33:16] -rw------- 1 boinc boinc   1593052 Jul 27 20:03 agis_ddmendpoints.agis.ALL.json
[2025-07-27 21:33:16] drwx------ 4 boinc boinc      4096 Jul 27 20:03 pilot3
[2025-07-27 21:33:16] -rw------- 1 boinc boinc 210222757 Jul 27 21:32 HITS.45743349._044073.pool.root.1
[2025-07-27 21:33:16] -rw------- 1 boinc boinc        95 Jul 27 21:32 pilot_heartbeat.json
[2025-07-27 21:33:16] -rw------- 1 boinc boinc      1020 Jul 27 21:32 memory_monitor_summary.json
[2025-07-27 21:33:16] -rw-rw-r-- 1 boinc boinc       529 Jul 27 21:32 boinc_task_state.xml
[2025-07-27 21:33:16] -rw------- 1 boinc boinc    354709 Jul 27 21:32 log.45743349._044073.job.log.tgz.1
[2025-07-27 21:33:16] -rw------- 1 boinc boinc      7734 Jul 27 21:32 heartbeat.json
[2025-07-27 21:33:16] -rw-rw-r-- 1 boinc boinc      8192 Jul 27 21:33 boinc_mmap_file
[2025-07-27 21:33:16] -rw-rw-r-- 1 boinc boinc        27 Jul 27 21:33 wrapper_checkpoint.txt
[2025-07-27 21:33:16] -rw------- 1 boinc boinc       822 Jul 27 21:33 pilotlog.txt
[2025-07-27 21:33:16] -rw------- 1 boinc boinc    542394 Jul 27 21:33 log.45743349._044073.job.log.1
[2025-07-27 21:33:16] -rw------- 1 boinc boinc       357 Jul 27 21:33 output.list
[2025-07-27 21:33:16] -rw-rw-r-- 1 boinc boinc       620 Jul 27 21:33 runtime_log
[2025-07-27 21:33:16] -rw------- 1 boinc boinc    911360 Jul 27 21:33 result.tar.gz
[2025-07-27 21:33:16] -rw-rw-r-- 1 boinc boinc      8954 Jul 27 21:33 runtime_log.err
[2025-07-27 21:33:16] -rw------- 1 boinc boinc       648 Jul 27 21:33 joNLDmLo0z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmR4SLDmTWpdBn.diag
[2025-07-27 21:33:16] -rw-rw-r-- 1 boinc boinc     21852 Jul 27 21:33 stderr.txt
[2025-07-27 21:33:16] HITS file was successfully produced:
[2025-07-27 21:33:16] -rw------- 1 boinc boinc 210222757 Jul 27 21:32 shared/HITS.pool.root.1
[2025-07-27 21:33:16]  *** Contents of shared directory: ***
[2025-07-27 21:33:16] total 388416
[2025-07-27 21:33:16] -rw-r--r-- 2 boinc boinc 186029154 Jul 27 20:03 ATLAS.root_0
[2025-07-27 21:33:16] -rw-r--r-- 2 boinc boinc     15095 Jul 27 20:03 start_atlas.sh
[2025-07-27 21:33:16] -rw-r--r-- 2 boinc boinc    542885 Jul 27 20:03 input.tar.gz
[2025-07-27 21:33:16] -rw------- 1 boinc boinc 210222757 Jul 27 21:32 HITS.pool.root.1
[2025-07-27 21:33:16] -rw------- 1 boinc boinc    911360 Jul 27 21:33 result.tar.gz
21:33:17 (1864140): run_atlas exited; CPU time 27979.979706
21:33:17 (1864140): called boinc_finish(0)

</stderr_txt>
]]>

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