Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:45:36 (980632): wrapper (7.7.26015): starting
21:45:36 (980632): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 21:45:36] Arguments: --nthreads 8
[2025-07-26 21:45:36] Threads: 8
[2025-07-26 21:45:36] Checking for CVMFS
[2025-07-26 21:45:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 21:45:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 21:45:36] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 21:45:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 21:45:36] 2.13.1.0 5097 13334 189488 148795 3 196 24181512 40960001 9873 16776704 0 34554807 99.925 17624081 43576 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 21:45:36] CVMFS is ok
[2025-07-26 21:45:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 21:45:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 21:45:36] Further information can be found at the LHC@home message board.
[2025-07-26 21:45:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 21:45:36] Checking for apptainer binary...
[2025-07-26 21:45:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 21:45:36] Running /usr/bin/apptainer --version
[2025-07-26 21:45:36] apptainer version 1.4.1-1.el9
[2025-07-26 21:45:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 21:45:36] c-212-6.aglt2.org
[2025-07-26 21:45:36] apptainer works
[2025-07-26 21:45:36] Set ATHENA_PROC_NUMBER=8
[2025-07-26 21:45:36] Set ATHENA_CORE_NUMBER=8
[2025-07-26 21:45:36] Starting ATLAS job with PandaID=6745502530
[2025-07-26 21:45:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 23:05:29]  *** The last 200 lines of the pilot log: ***
[2025-07-26 23:05:29]  mtime=0
[2025-07-26 23:05:29]  protocol_id=None
[2025-07-26 23:05:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 23:05:29]  replicas=None
[2025-07-26 23:05:29]  scope=mc23_13p6TeV
[2025-07-26 23:05:29]  status=None
[2025-07-26 23:05:29]  status_code=0
[2025-07-26 23:05:29]  storage_token=
[2025-07-26 23:05:29]  surl=/tmp/boinchome/slots/9/PanDA_Pilot-6745502530/log.45743349._044059.job.log.tgz.1
[2025-07-26 23:05:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/34/00/log.45743349._044059.job.log.tgz.1
[2025-07-26 23:05:29]  workdir=None
[2025-07-26 23:05:29] ]
[2025-07-26 23:05:29] 2025-07-27 03:04:47,947 | INFO     | transferring file log.45743349._044059.job.log.tgz.1 from /tmp/boinchome/slots/9/PanDA_Pilot-6745502530/log.45743349._044059.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 23:05:29] 2025-07-27 03:04:47,947 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/9/PanDA_Pilot-6745502530/log.45743349._044059.job.log.tgz.1 /tmp/boinchome/slots/9/log.45743349._044059.job
[2025-07-26 23:05:29] 2025-07-27 03:04:47,984 | INFO     | adding to output.list: log.45743349._044059.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/34/00/log.45743349._044059.job.log.tg
[2025-07-26 23:05:29] 2025-07-27 03:04:47,985 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 23:05:29] 2025-07-27 03:04:47,986 | INFO     | summary of transferred files:
[2025-07-26 23:05:29] 2025-07-27 03:04:47,986 | INFO     |  -- lfn=log.45743349._044059.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 23:05:29] 2025-07-27 03:04:47,986 | INFO     | stage-out finished correctly
[2025-07-26 23:05:29] 2025-07-27 03:04:48,516 | INFO     | monitor loop #347: job 0:6745502530 is in state 'finished'
[2025-07-26 23:05:29] 2025-07-27 03:04:48,517 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 23:05:29] 2025-07-27 03:04:50,033 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 23:05:29] 2025-07-27 03:04:51,020 | INFO     | monitor loop #348: job 0:6745502530 is in state 'finished'
[2025-07-26 23:05:29] 2025-07-27 03:04:51,020 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 23:05:29] 2025-07-27 03:04:51,724 | INFO     | job 6745502530 has state=finished
[2025-07-26 23:05:29] 2025-07-27 03:04:51,724 | INFO     | preparing for final server update for job 6745502530 in state='finished'
[2025-07-26 23:05:29] 2025-07-27 03:04:51,725 | INFO     | this job has now completed (state=finished)
[2025-07-26 23:05:29] 2025-07-27 03:04:51,725 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 23:05:29] 2025-07-27 03:04:51,725 | INFO     | log transfer has been attempted: DONE
[2025-07-26 23:05:29] 2025-07-27 03:04:51,725 | INFO     | job 6745502530 has finished - writing final server update
[2025-07-26 23:05:29] 2025-07-27 03:04:51,726 | INFO     | total number of processed events: 400 (read)
[2025-07-26 23:05:29] 2025-07-27 03:04:51,727 | INFO     | executing command: lscpu
[2025-07-26 23:05:29] 2025-07-27 03:04:51,790 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 23:05:29] 2025-07-27 03:04:53,523 | INFO     | monitor loop #349: job 0:6745502530 is in state 'finished'
[2025-07-26 23:05:29] 2025-07-27 03:04:53,523 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 23:05:29] 2025-07-27 03:04:56,027 | INFO     | monitor loop #350: job 0:6745502530 is in state 'finished'
[2025-07-26 23:05:29] 2025-07-27 03:04:56,027 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 23:05:29] 2025-07-27 03:04:57,437 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 23:05:29] 2025-07-27 03:04:57,443 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3297.19525
[2025-07-26 23:05:29] 2025-07-27 03:04:57,456 | INFO     | using path: /tmp/boinchome/slots/9/PanDA_Pilot-6745502530/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 23:05:29] 2025-07-27 03:04:57,457 | INFO     | extracted standard info from prmon json
[2025-07-26 23:05:29] 2025-07-27 03:04:57,457 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 23:05:29] 2025-07-27 03:04:57,457 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 23:05:29] 2025-07-27 03:04:57,457 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 23:05:29] 2025-07-27 03:04:57,457 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 23:05:29] 2025-07-27 03:04:57,459 | INFO     | fitting pss+swap vs Time
[2025-07-26 23:05:29] 2025-07-27 03:04:57,459 | INFO     | sum of square deviations: 110960220.0
[2025-07-26 23:05:29] 2025-07-27 03:04:57,459 | INFO     | sum of deviations: -758557020.9999999
[2025-07-26 23:05:29] 2025-07-27 03:04:57,459 | INFO     | mean x: 1753583219.0
[2025-07-26 23:05:29] 2025-07-27 03:04:57,459 | INFO     | mean y: 2522615.591549296
[2025-07-26 23:05:29] 2025-07-27 03:04:57,460 | INFO     | -- intersect: 11990538344.834248
[2025-07-26 23:05:29] 2025-07-27 03:04:57,460 | INFO     | intersect: 11990538344.834248
[2025-07-26 23:05:29] 2025-07-27 03:04:57,460 | INFO     | chi2: 0.002246370241883447
[2025-07-26 23:05:29] 2025-07-27 03:04:57,460 | INFO     | -- intersect: 11990538344.834248
[2025-07-26 23:05:29] 2025-07-27 03:04:57,460 | INFO     | current memory leak: -6.84 B/s (using 71 data points, chi2=0.00)
[2025-07-26 23:05:29] 2025-07-27 03:04:57,460 | INFO     | could have reported an average CPU frequency of 3288 MHz (6 samples)
[2025-07-26 23:05:29] 2025-07-27 03:04:57,460 | INFO     | ..............................
[2025-07-26 23:05:29] 2025-07-27 03:04:57,460 | INFO     | . Timing measurements:
[2025-07-26 23:05:29] 2025-07-27 03:04:57,461 | INFO     | . get job = 0 s
[2025-07-26 23:05:29] 2025-07-27 03:04:57,461 | INFO     | . initial setup = 2 s
[2025-07-26 23:05:29] 2025-07-27 03:04:57,461 | INFO     | . payload setup = 7 s
[2025-07-26 23:05:29] 2025-07-27 03:04:57,463 | INFO     | . stage-in = 0 s
[2025-07-26 23:05:29] 2025-07-27 03:04:57,463 | INFO     | . payload execution = 4712 s
[2025-07-26 23:05:29] 2025-07-27 03:04:57,463 | INFO     | . stage-out = 0 s
[2025-07-26 23:05:29] 2025-07-27 03:04:57,463 | INFO     | . log creation = 0 s
[2025-07-26 23:05:29] 2025-07-27 03:04:57,463 | INFO     | ..............................
[2025-07-26 23:05:29] 2025-07-27 03:04:57,630 | INFO     | 
[2025-07-26 23:05:29] 2025-07-27 03:04:57,634 | INFO     | job summary report
[2025-07-26 23:05:29] 2025-07-27 03:04:57,635 | INFO     | --------------------------------------------------
[2025-07-26 23:05:29] 2025-07-27 03:04:57,635 | INFO     | PanDA job id: 6745502530
[2025-07-26 23:05:29] 2025-07-27 03:04:57,635 | INFO     | task id: 45743349
[2025-07-26 23:05:29] 2025-07-27 03:04:57,635 | INFO     | errors: (none)
[2025-07-26 23:05:29] 2025-07-27 03:04:57,635 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 23:05:29] 2025-07-27 03:04:57,635 | INFO     | pilot state: finished 
[2025-07-26 23:05:29] 2025-07-27 03:04:57,635 | INFO     | transexitcode: 0
[2025-07-26 23:05:29] 2025-07-27 03:04:57,635 | INFO     | exeerrorcode: 0
[2025-07-26 23:05:29] 2025-07-27 03:04:57,635 | INFO     | exeerrordiag: 
[2025-07-26 23:05:29] 2025-07-27 03:04:57,635 | INFO     | exitcode: 0
[2025-07-26 23:05:29] 2025-07-27 03:04:57,635 | INFO     | exitmsg: OK
[2025-07-26 23:05:29] 2025-07-27 03:04:57,635 | INFO     | cpuconsumptiontime: 34380 s
[2025-07-26 23:05:29] 2025-07-27 03:04:57,637 | INFO     | nevents: 400
[2025-07-26 23:05:29] 2025-07-27 03:04:57,637 | INFO     | neventsw: 0
[2025-07-26 23:05:29] 2025-07-27 03:04:57,637 | INFO     | pid: 991961
[2025-07-26 23:05:29] 2025-07-27 03:04:57,637 | INFO     | pgrp: 991961
[2025-07-26 23:05:29] 2025-07-27 03:04:57,637 | INFO     | corecount: 8
[2025-07-26 23:05:29] 2025-07-27 03:04:57,637 | INFO     | event service: False
[2025-07-26 23:05:29] 2025-07-27 03:04:57,638 | INFO     | sizes: {0: 2397473, 5: 2397735, 11: 2397791, 4721: 2423873, 4723: 2432871, 4725: 2432927, 4732: 2433249}
[2025-07-26 23:05:29] 2025-07-27 03:04:57,638 | INFO     | --------------------------------------------------
[2025-07-26 23:05:29] 2025-07-27 03:04:57,638 | INFO     | 
[2025-07-26 23:05:29] 2025-07-27 03:04:57,639 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2025-07-26 23:05:29] 2025-07-27 03:04:57,672 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 23:05:29] 2025-07-27 03:04:57,672 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 23:05:29] 2025-07-27 03:04:57,672 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 23:05:29] 2025-07-27 03:04:57,673 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 23:05:29] 2025-07-27 03:04:57,673 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 23:05:29] 2025-07-27 03:04:57,673 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 23:05:29] 2025-07-27 03:04:57,673 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 23:05:29] 2025-07-27 03:04:57,673 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 23:05:29] 2025-07-27 03:04:57,673 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 23:05:29] 2025-07-27 03:04:57,673 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 23:05:29] 2025-07-27 03:04:57,673 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 23:05:29] 2025-07-27 03:04:57,673 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 23:05:29] 2025-07-27 03:04:57,673 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 23:05:29] 2025-07-27 03:04:57,673 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 23:05:29] 2025-07-27 03:04:57,673 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 23:05:29] 2025-07-27 03:04:57,673 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 23:05:29] 2025-07-27 03:04:57,673 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 23:05:29] 2025-07-27 03:04:57,673 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 23:05:29] 2025-07-27 03:04:57,674 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 23:05:29] 2025-07-27 03:04:57,674 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 23:05:29] 2025-07-27 03:04:57,674 | INFO     | job 6745502530 has completed (purged errors)
[2025-07-26 23:05:29] 2025-07-27 03:04:57,674 | INFO     | overall cleanup function is called
[2025-07-26 23:05:29] 2025-07-27 03:04:58,682 | INFO     | --- collectZombieJob: --- 10, [991961]
[2025-07-26 23:05:29] 2025-07-27 03:04:58,684 | INFO     | zombie collector waiting for pid 991961
[2025-07-26 23:05:29] 2025-07-27 03:04:58,684 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 23:05:29] 2025-07-27 03:04:58,684 | INFO     | collected zombie processes
[2025-07-26 23:05:29] 2025-07-27 03:04:58,685 | INFO     | will attempt to kill all subprocesses of pid=991961
[2025-07-26 23:05:29] 2025-07-27 03:04:59,099 | INFO     | process IDs to be killed: [991961] (in reverse order)
[2025-07-26 23:05:29] 2025-07-27 03:04:59,232 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 23:05:29] 2025-07-27 03:04:59,233 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 23:05:29] 2025-07-27 03:04:59,250 | INFO     | did not find any defunct processes belonging to 991961
[2025-07-26 23:05:29] 2025-07-27 03:04:59,268 | INFO     | did not find any defunct processes belonging to 991961
[2025-07-26 23:05:29] 2025-07-27 03:04:59,268 | INFO     | ready for new job
[2025-07-26 23:05:29] 2025-07-27 03:04:59,269 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 23:05:29] 2025-07-27 03:04:59,271 | INFO     | ***************************************
[2025-07-26 23:05:29] 2025-07-27 03:04:59,271 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 23:05:29] 2025-07-27 03:04:59,271 | INFO     | ***************************************
[2025-07-26 23:05:29] 2025-07-27 03:04:59,271 | INFO     | 
[2025-07-26 23:05:29] 2025-07-27 03:04:59,276 | INFO     | architecture information:
[2025-07-26 23:05:29] 2025-07-27 03:04:59,276 | INFO     | executing command: cat /etc/os-release
[2025-07-26 23:05:29] 2025-07-27 03:04:59,293 | INFO     | cat /etc/os-release:
[2025-07-26 23:05:29] NAME="CentOS Linux"
[2025-07-26 23:05:29] VERSION="7 (Core)"
[2025-07-26 23:05:29] ID="centos"
[2025-07-26 23:05:29] ID_LIKE="rhel fedora"
[2025-07-26 23:05:29] VERSION_ID="7"
[2025-07-26 23:05:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 23:05:29] ANSI_COLOR="0;31"
[2025-07-26 23:05:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 23:05:29] HOME_URL="https://www.centos.org/"
[2025-07-26 23:05:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 23:05:29] 
[2025-07-26 23:05:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 23:05:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 23:05:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 23:05:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 23:05:29] 
[2025-07-26 23:05:29] 2025-07-27 03:04:59,293 | INFO     | ***************************************
[2025-07-26 23:05:29] 2025-07-27 03:04:59,796 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2025-07-26 23:05:29] 2025-07-27 03:04:59,821 | INFO     | sufficient remaining disk space (124170272768 B)
[2025-07-26 23:05:29] 2025-07-27 03:04:59,822 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 23:05:29] 2025-07-27 03:04:59,823 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 23:05:29] 2025-07-27 03:04:59,823 | INFO     | update_server=False
[2025-07-26 23:05:29] 2025-07-27 03:04:59,823 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 23:05:29] 2025-07-27 03:04:59,823 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:05:29] 2025-07-27 03:04:59,823 | INFO     | aborting loop
[2025-07-26 23:05:29] 2025-07-27 03:05:00,624 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 23:05:29] 2025-07-27 03:05:00,666 | INFO     | all job control threads have been joined
[2025-07-26 23:05:29] 2025-07-27 03:05:00,720 | INFO     | all data control threads have been joined
[2025-07-26 23:05:29] 2025-07-27 03:05:00,753 | INFO     | all payload control threads have been joined
[2025-07-26 23:05:29] 2025-07-27 03:05:00,829 | INFO     | [job] retrieve thread has finished
[2025-07-26 23:05:29] 2025-07-27 03:05:00,830 | INFO     | [job] job monitor thread has finished
[2025-07-26 23:05:29] 2025-07-27 03:05:00,954 | INFO     | [payload] failed_post thread has finished
[2025-07-26 23:05:29] 2025-07-27 03:05:01,094 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 23:05:29] 2025-07-27 03:05:01,165 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 23:05:29] 2025-07-27 03:05:01,451 | INFO     | [data] copytool_in thread has finished
[2025-07-26 23:05:29] 2025-07-27 03:05:01,672 | INFO     | [job] control thread has finished
[2025-07-26 23:05:29] 2025-07-27 03:05:01,726 | INFO     | [data] control thread has finished
[2025-07-26 23:05:29] 2025-07-27 03:05:01,758 | INFO     | [payload] control thread has finished
[2025-07-26 23:05:29] 2025-07-27 03:05:01,865 | INFO     | [job] validate thread has finished
[2025-07-26 23:05:29] 2025-07-27 03:05:01,892 | INFO     | [payload] validate_post thread has finished
[2025-07-26 23:05:29] 2025-07-27 03:05:01,990 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 23:05:29] 2025-07-27 03:05:02,107 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 23:05:29] 2025-07-27 03:05:02,109 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 23:05:29] 2025-07-27 03:05:02,555 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:05:29] 2025-07-27 03:05:03,100 | INFO     | [data] copytool_out thread has finished
[2025-07-26 23:05:29] 2025-07-27 03:05:03,560 | INFO     | [job] queue monitor thread has finished
[2025-07-26 23:05:29] 2025-07-27 03:05:04,630 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 23:05:29] 2025-07-27 03:05:06,386 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139787287623488)>', '<ExcThread(monitor, started 139786782222080)>']
[2025-07-26 23:05:29] 2025-07-27 03:05:11,412 | INFO     | all workflow threads have been joined
[2025-07-26 23:05:29] 2025-07-27 03:05:11,412 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 23:05:29] 2025-07-27 03:05:11,412 | INFO     | traces error code: 0
[2025-07-26 23:05:29] 2025-07-27 03:05:11,413 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 23:05:29] 2025-07-27 03:05:29,255 | INFO     | PID=984220 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-26 23:05:29] 2025-07-27 03:05:29,259 | INFO     | .. there are 18 such processes running
[2025-07-26 23:05:29] 2025-07-27 03:05:29,260 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 23:05:29] 2025-07-27 03:05:29,260 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 23:05:29] 2025-07-27 03:05:29,260 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 23:05:29] 2025-07-27 03:05:29,260 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 23:05:29] 2025-07-27 03:05:29,260 | INFO     | [monitor] control thread has ended
[2025-07-26 23:05:29] 2025-07-27 03:05:29,392 [wrapper] ==== pilot stdout END ====
[2025-07-26 23:05:29] 2025-07-27 03:05:29,399 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 23:05:29] 2025-07-27 03:05:29,405 [wrapper] pilotpid: 984220
[2025-07-26 23:05:29] 2025-07-27 03:05:29,409 [wrapper] Pilot exit status: 0
[2025-07-26 23:05:29] 2025-07-27 03:05:29,426 [wrapper] pandaids: 6745502530
[2025-07-26 23:05:29] 2025-07-27 03:05:29,516 [wrapper] cleanup supervisor_pilot 1236193 984221
[2025-07-26 23:05:29] 2025-07-27 03:05:29,522 [wrapper] Test setup, not cleaning
[2025-07-26 23:05:29] 2025-07-27 03:05:29,526 [wrapper] apfmon messages muted
[2025-07-26 23:05:29] 2025-07-27 03:05:29,534 [wrapper] ==== wrapper stdout END ====
[2025-07-26 23:05:29] 2025-07-27 03:05:29,541 [wrapper] ==== wrapper stderr END ====
[2025-07-26 23:05:29]  *** Error codes and diagnostics ***
[2025-07-26 23:05:29]     "exeErrorCode": 0,
[2025-07-26 23:05:29]     "exeErrorDiag": "",
[2025-07-26 23:05:29]     "pilotErrorCode": 0,
[2025-07-26 23:05:29]     "pilotErrorDiag": "",
[2025-07-26 23:05:29]  *** Listing of results directory ***
[2025-07-26 23:05:29] total 354064
[2025-07-26 23:05:29] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 16:19 pilot3.tar.gz
[2025-07-26 23:05:29] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 16:37 queuedata.json
[2025-07-26 23:05:29] -rwx------. 1 boincer umatlas     36292 Jul 26 16:38 runpilot2-wrapper.sh
[2025-07-26 23:05:29] -rw-r--r--. 1 boincer umatlas       100 Jul 26 21:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 23:05:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 21:45 run_atlas
[2025-07-26 23:05:29] -rw-r--r--. 1 boincer umatlas       105 Jul 26 21:45 job.xml
[2025-07-26 23:05:29] -rw-r--r--. 2 boincer umatlas 146148392 Jul 26 21:45 EVNT.45743347._002517.pool.root.1
[2025-07-26 23:05:29] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 21:45 start_atlas.sh
[2025-07-26 23:05:29] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 21:45 shared
[2025-07-26 23:05:29] -rw-r--r--. 2 boincer umatlas    542892 Jul 26 21:45 input.tar.gz
[2025-07-26 23:05:29] -rw-r--r--. 1 boincer umatlas         0 Jul 26 21:45 boinc_lockfile
[2025-07-26 23:05:29] -rw-r--r--. 1 boincer umatlas      2562 Jul 26 21:45 pandaJob.out
[2025-07-26 23:05:29] -rw-------. 1 boincer umatlas    980125 Jul 26 21:45 agis_schedconf.cvmfs.json
[2025-07-26 23:05:29] -rw-------. 1 boincer umatlas   1593052 Jul 26 21:45 agis_ddmendpoints.agis.ALL.json
[2025-07-26 23:05:29] drwx------. 4 boincer umatlas      4096 Jul 26 21:45 pilot3
[2025-07-26 23:05:29] -rw-r--r--. 1 boincer umatlas      6944 Jul 26 23:03 init_data.xml
[2025-07-26 23:05:29] -rw-------. 1 boincer umatlas 211021492 Jul 26 23:04 HITS.45743349._044059.pool.root.1
[2025-07-26 23:05:29] -rw-r--r--. 1 boincer umatlas       529 Jul 26 23:04 boinc_task_state.xml
[2025-07-26 23:05:29] -rw-------. 1 boincer umatlas        95 Jul 26 23:04 pilot_heartbeat.json
[2025-07-26 23:05:29] -rw-------. 1 boincer umatlas      1026 Jul 26 23:04 memory_monitor_summary.json
[2025-07-26 23:05:29] -rw-------. 1 boincer umatlas    293377 Jul 26 23:04 log.45743349._044059.job.log.tgz.1
[2025-07-26 23:05:29] -rw-------. 1 boincer umatlas      7762 Jul 26 23:04 heartbeat.json
[2025-07-26 23:05:29] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 23:05 boinc_mmap_file
[2025-07-26 23:05:29] -rw-r--r--. 1 boincer umatlas        27 Jul 26 23:05 wrapper_checkpoint.txt
[2025-07-26 23:05:29] -rw-------. 1 boincer umatlas       822 Jul 26 23:05 pilotlog.txt
[2025-07-26 23:05:29] -rw-------. 1 boincer umatlas    464525 Jul 26 23:05 log.45743349._044059.job.log.1
[2025-07-26 23:05:29] -rw-------. 1 boincer umatlas       357 Jul 26 23:05 output.list
[2025-07-26 23:05:29] -rw-r--r--. 1 boincer umatlas       620 Jul 26 23:05 runtime_log
[2025-07-26 23:05:29] -rw-------. 1 boincer umatlas    778240 Jul 26 23:05 result.tar.gz
[2025-07-26 23:05:29] -rw-r--r--. 1 boincer umatlas      8655 Jul 26 23:05 runtime_log.err
[2025-07-26 23:05:29] -rw-------. 1 boincer umatlas       650 Jul 26 23:05 D75MDmIq0z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmU4SLDmBtmzmm.diag
[2025-07-26 23:05:29] -rw-r--r--. 1 boincer umatlas     21739 Jul 26 23:05 stderr.txt
[2025-07-26 23:05:29] HITS file was successfully produced:
[2025-07-26 23:05:29] -rw-------. 1 boincer umatlas 211021492 Jul 26 23:04 shared/HITS.pool.root.1
[2025-07-26 23:05:29]  *** Contents of shared directory: ***
[2025-07-26 23:05:29] total 350116
[2025-07-26 23:05:29] -rw-r--r--. 2 boincer umatlas 146148392 Jul 26 21:45 ATLAS.root_0
[2025-07-26 23:05:29] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 21:45 start_atlas.sh
[2025-07-26 23:05:29] -rw-r--r--. 2 boincer umatlas    542892 Jul 26 21:45 input.tar.gz
[2025-07-26 23:05:29] -rw-------. 1 boincer umatlas 211021492 Jul 26 23:04 HITS.pool.root.1
[2025-07-26 23:05:29] -rw-------. 1 boincer umatlas    778240 Jul 26 23:05 result.tar.gz
23:05:31 (980632): run_atlas exited; CPU time 34502.281244
23:05:31 (980632): called boinc_finish(0)

</stderr_txt>
]]>

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