Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:34:33 (1479064): wrapper (7.7.26015): starting
21:34:33 (1479064): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 21:34:33] Arguments: --nthreads 8
[2025-07-26 21:34:33] Threads: 8
[2025-07-26 21:34:33] Checking for CVMFS
[2025-07-26 21:34:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 21:34:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 21:34:33] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 21:34:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 21:34:33] 2.13.1.0 1173468 12282 211708 148795 2 196 35854877 40960001 8579 16776704 0 48903990 99.869 24035456 40882 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 21:34:33] CVMFS is ok
[2025-07-26 21:34:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 21:34:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 21:34:33] Further information can be found at the LHC@home message board.
[2025-07-26 21:34:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 21:34:33] Checking for apptainer binary...
[2025-07-26 21:34:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 21:34:33] Running /usr/bin/apptainer --version
[2025-07-26 21:34:33] apptainer version 1.4.1-1.el9
[2025-07-26 21:34:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 21:34:33] c-212-20.aglt2.org
[2025-07-26 21:34:33] apptainer works
[2025-07-26 21:34:33] Set ATHENA_PROC_NUMBER=8
[2025-07-26 21:34:33] Set ATHENA_CORE_NUMBER=8
[2025-07-26 21:34:33] Starting ATLAS job with PandaID=6745502399
[2025-07-26 21:34:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 22:48:24]  *** The last 200 lines of the pilot log: ***
[2025-07-26 22:48:24]  is_altstaged=None
[2025-07-26 22:48:24]  is_tar=False
[2025-07-26 22:48:24]  lfn=log.45743349._043928.job.log.tgz.1
[2025-07-26 22:48:24]  mtime=0
[2025-07-26 22:48:24]  protocol_id=None
[2025-07-26 22:48:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 22:48:24]  replicas=None
[2025-07-26 22:48:24]  scope=mc23_13p6TeV
[2025-07-26 22:48:24]  status=None
[2025-07-26 22:48:24]  status_code=0
[2025-07-26 22:48:24]  storage_token=
[2025-07-26 22:48:24]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745502399/log.45743349._043928.job.log.tgz.1
[2025-07-26 22:48:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/47/log.45743349._043928.job.log.tgz.1
[2025-07-26 22:48:24]  workdir=None
[2025-07-26 22:48:24] ]
[2025-07-26 22:48:24] 2025-07-27 02:47:46,393 | INFO     | transferring file log.45743349._043928.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745502399/log.45743349._043928.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 22:48:24] 2025-07-27 02:47:46,394 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745502399/log.45743349._043928.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._043928.job
[2025-07-26 22:48:24] 2025-07-27 02:47:46,412 | INFO     | adding to output.list: log.45743349._043928.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/47/log.45743349._043928.job.log.tg
[2025-07-26 22:48:24] 2025-07-27 02:47:46,412 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 22:48:24] 2025-07-27 02:47:46,412 | INFO     | summary of transferred files:
[2025-07-26 22:48:24] 2025-07-27 02:47:46,412 | INFO     |  -- lfn=log.45743349._043928.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 22:48:24] 2025-07-27 02:47:46,413 | INFO     | stage-out finished correctly
[2025-07-26 22:48:24] 2025-07-27 02:47:46,471 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 22:48:24] 2025-07-27 02:47:47,018 | INFO     | monitor loop #325: job 0:6745502399 is in state 'finished'
[2025-07-26 22:48:24] 2025-07-27 02:47:47,018 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 22:48:24] 2025-07-27 02:47:47,118 | INFO     | job 6745502399 has state=finished
[2025-07-26 22:48:24] 2025-07-27 02:47:47,118 | INFO     | preparing for final server update for job 6745502399 in state='finished'
[2025-07-26 22:48:24] 2025-07-27 02:47:47,119 | INFO     | this job has now completed (state=finished)
[2025-07-26 22:48:24] 2025-07-27 02:47:47,119 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 22:48:24] 2025-07-27 02:47:47,119 | INFO     | log transfer has been attempted: DONE
[2025-07-26 22:48:24] 2025-07-27 02:47:47,119 | INFO     | job 6745502399 has finished - writing final server update
[2025-07-26 22:48:24] 2025-07-27 02:47:47,119 | INFO     | total number of processed events: 400 (read)
[2025-07-26 22:48:24] 2025-07-27 02:47:47,119 | INFO     | executing command: lscpu
[2025-07-26 22:48:24] 2025-07-27 02:47:47,173 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 22:48:24] 2025-07-27 02:47:49,520 | INFO     | monitor loop #326: job 0:6745502399 is in state 'finished'
[2025-07-26 22:48:24] 2025-07-27 02:47:49,520 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 22:48:24] 2025-07-27 02:47:51,211 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 22:48:24] 2025-07-27 02:47:51,221 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3183.895593750001
[2025-07-26 22:48:24] 2025-07-27 02:47:51,231 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745502399/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 22:48:24] 2025-07-27 02:47:51,231 | INFO     | extracted standard info from prmon json
[2025-07-26 22:48:24] 2025-07-27 02:47:51,231 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 22:48:24] 2025-07-27 02:47:51,232 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 22:48:24] 2025-07-27 02:47:51,232 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 22:48:24] 2025-07-27 02:47:51,232 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 22:48:24] 2025-07-27 02:47:51,233 | INFO     | fitting pss+swap vs Time
[2025-07-26 22:48:24] 2025-07-27 02:47:51,233 | INFO     | sum of square deviations: 85136480.0
[2025-07-26 22:48:24] 2025-07-27 02:47:51,233 | INFO     | sum of deviations: -5836163104.999999
[2025-07-26 22:48:24] 2025-07-27 02:47:51,233 | INFO     | mean x: 1753582366.0
[2025-07-26 22:48:24] 2025-07-27 02:47:51,233 | INFO     | mean y: 2635714.953846154
[2025-07-26 22:48:24] 2025-07-27 02:47:51,233 | INFO     | -- intersect: 120211889210.37444
[2025-07-26 22:48:24] 2025-07-27 02:47:51,233 | INFO     | intersect: 120211889210.37444
[2025-07-26 22:48:24] 2025-07-27 02:47:51,234 | INFO     | chi2: 0.02390738476435024
[2025-07-26 22:48:24] 2025-07-27 02:47:51,234 | INFO     | -- intersect: 120211889210.37444
[2025-07-26 22:48:24] 2025-07-27 02:47:51,234 | INFO     | current memory leak: -68.55 B/s (using 65 data points, chi2=0.02)
[2025-07-26 22:48:24] 2025-07-27 02:47:51,234 | INFO     | could have reported an average CPU frequency of 3220 MHz (6 samples)
[2025-07-26 22:48:24] 2025-07-27 02:47:51,234 | INFO     | ..............................
[2025-07-26 22:48:24] 2025-07-27 02:47:51,234 | INFO     | . Timing measurements:
[2025-07-26 22:48:24] 2025-07-27 02:47:51,234 | INFO     | . get job = 0 s
[2025-07-26 22:48:24] 2025-07-27 02:47:51,234 | INFO     | . initial setup = 2 s
[2025-07-26 22:48:24] 2025-07-27 02:47:51,234 | INFO     | . payload setup = 6 s
[2025-07-26 22:48:24] 2025-07-27 02:47:51,234 | INFO     | . stage-in = 0 s
[2025-07-26 22:48:24] 2025-07-27 02:47:51,234 | INFO     | . payload execution = 4358 s
[2025-07-26 22:48:24] 2025-07-27 02:47:51,234 | INFO     | . stage-out = 0 s
[2025-07-26 22:48:24] 2025-07-27 02:47:51,235 | INFO     | . log creation = 0 s
[2025-07-26 22:48:24] 2025-07-27 02:47:51,235 | INFO     | ..............................
[2025-07-26 22:48:24] 2025-07-27 02:47:51,293 | INFO     | 
[2025-07-26 22:48:24] 2025-07-27 02:47:51,294 | INFO     | job summary report
[2025-07-26 22:48:24] 2025-07-27 02:47:51,294 | INFO     | --------------------------------------------------
[2025-07-26 22:48:24] 2025-07-27 02:47:51,294 | INFO     | PanDA job id: 6745502399
[2025-07-26 22:48:24] 2025-07-27 02:47:51,294 | INFO     | task id: 45743349
[2025-07-26 22:48:24] 2025-07-27 02:47:51,294 | INFO     | errors: (none)
[2025-07-26 22:48:24] 2025-07-27 02:47:51,294 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 22:48:24] 2025-07-27 02:47:51,294 | INFO     | pilot state: finished 
[2025-07-26 22:48:24] 2025-07-27 02:47:51,295 | INFO     | transexitcode: 0
[2025-07-26 22:48:24] 2025-07-27 02:47:51,295 | INFO     | exeerrorcode: 0
[2025-07-26 22:48:24] 2025-07-27 02:47:51,295 | INFO     | exeerrordiag: 
[2025-07-26 22:48:24] 2025-07-27 02:47:51,295 | INFO     | exitcode: 0
[2025-07-26 22:48:24] 2025-07-27 02:47:51,295 | INFO     | exitmsg: OK
[2025-07-26 22:48:24] 2025-07-27 02:47:51,295 | INFO     | cpuconsumptiontime: 32534 s
[2025-07-26 22:48:24] 2025-07-27 02:47:51,295 | INFO     | nevents: 400
[2025-07-26 22:48:24] 2025-07-27 02:47:51,295 | INFO     | neventsw: 0
[2025-07-26 22:48:24] 2025-07-27 02:47:51,295 | INFO     | pid: 1489529
[2025-07-26 22:48:24] 2025-07-27 02:47:51,295 | INFO     | pgrp: 1489529
[2025-07-26 22:48:24] 2025-07-27 02:47:51,295 | INFO     | corecount: 8
[2025-07-26 22:48:24] 2025-07-27 02:47:51,295 | INFO     | event service: False
[2025-07-26 22:48:24] 2025-07-27 02:47:51,295 | INFO     | sizes: {0: 2397475, 4: 2397737, 11: 2397765, 4368: 2432876, 4373: 2433014}
[2025-07-26 22:48:24] 2025-07-27 02:47:51,295 | INFO     | --------------------------------------------------
[2025-07-26 22:48:24] 2025-07-27 02:47:51,295 | INFO     | 
[2025-07-26 22:48:24] 2025-07-27 02:47:51,296 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 22:48:24] 2025-07-27 02:47:51,320 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 22:48:24] 2025-07-27 02:47:51,321 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 22:48:24] 2025-07-27 02:47:51,321 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 22:48:24] 2025-07-27 02:47:51,321 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 22:48:24] 2025-07-27 02:47:51,321 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 22:48:24] 2025-07-27 02:47:51,321 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 22:48:24] 2025-07-27 02:47:51,321 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 22:48:24] 2025-07-27 02:47:51,321 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 22:48:24] 2025-07-27 02:47:51,321 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 22:48:24] 2025-07-27 02:47:51,321 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 22:48:24] 2025-07-27 02:47:51,321 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 22:48:24] 2025-07-27 02:47:51,321 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 22:48:24] 2025-07-27 02:47:51,321 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 22:48:24] 2025-07-27 02:47:51,321 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 22:48:24] 2025-07-27 02:47:51,321 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 22:48:24] 2025-07-27 02:47:51,321 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 22:48:24] 2025-07-27 02:47:51,321 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 22:48:24] 2025-07-27 02:47:51,321 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 22:48:24] 2025-07-27 02:47:51,321 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 22:48:24] 2025-07-27 02:47:51,322 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 22:48:24] 2025-07-27 02:47:51,322 | INFO     | job 6745502399 has completed (purged errors)
[2025-07-26 22:48:24] 2025-07-27 02:47:51,322 | INFO     | overall cleanup function is called
[2025-07-26 22:48:24] 2025-07-27 02:47:52,329 | INFO     | --- collectZombieJob: --- 10, [1489529]
[2025-07-26 22:48:24] 2025-07-27 02:47:52,329 | INFO     | zombie collector waiting for pid 1489529
[2025-07-26 22:48:24] 2025-07-27 02:47:52,329 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 22:48:24] 2025-07-27 02:47:52,329 | INFO     | collected zombie processes
[2025-07-26 22:48:24] 2025-07-27 02:47:52,329 | INFO     | will attempt to kill all subprocesses of pid=1489529
[2025-07-26 22:48:24] 2025-07-27 02:47:52,604 | INFO     | process IDs to be killed: [1489529] (in reverse order)
[2025-07-26 22:48:24] 2025-07-27 02:47:52,693 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 22:48:24] 2025-07-27 02:47:52,693 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 22:48:24] 2025-07-27 02:47:52,702 | INFO     | did not find any defunct processes belonging to 1489529
[2025-07-26 22:48:24] 2025-07-27 02:47:52,710 | INFO     | did not find any defunct processes belonging to 1489529
[2025-07-26 22:48:24] 2025-07-27 02:47:52,710 | INFO     | ready for new job
[2025-07-26 22:48:24] 2025-07-27 02:47:52,710 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 22:48:24] 2025-07-27 02:47:52,711 | INFO     | ***************************************
[2025-07-26 22:48:24] 2025-07-27 02:47:52,711 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 22:48:24] 2025-07-27 02:47:52,712 | INFO     | ***************************************
[2025-07-26 22:48:24] 2025-07-27 02:47:52,712 | INFO     | 
[2025-07-26 22:48:24] 2025-07-27 02:47:52,715 | INFO     | architecture information:
[2025-07-26 22:48:24] 2025-07-27 02:47:52,715 | INFO     | executing command: cat /etc/os-release
[2025-07-26 22:48:24] 2025-07-27 02:47:52,727 | INFO     | cat /etc/os-release:
[2025-07-26 22:48:24] NAME="CentOS Linux"
[2025-07-26 22:48:24] VERSION="7 (Core)"
[2025-07-26 22:48:24] ID="centos"
[2025-07-26 22:48:24] ID_LIKE="rhel fedora"
[2025-07-26 22:48:24] VERSION_ID="7"
[2025-07-26 22:48:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 22:48:24] ANSI_COLOR="0;31"
[2025-07-26 22:48:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 22:48:24] HOME_URL="https://www.centos.org/"
[2025-07-26 22:48:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 22:48:24] 
[2025-07-26 22:48:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 22:48:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 22:48:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 22:48:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 22:48:24] 
[2025-07-26 22:48:24] 2025-07-27 02:47:52,727 | INFO     | ***************************************
[2025-07-26 22:48:24] 2025-07-27 02:47:53,230 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 22:48:24] 2025-07-27 02:47:53,246 | INFO     | sufficient remaining disk space (128863698944 B)
[2025-07-26 22:48:24] 2025-07-27 02:47:53,246 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 22:48:24] 2025-07-27 02:47:53,246 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 22:48:24] 2025-07-27 02:47:53,246 | INFO     | update_server=False
[2025-07-26 22:48:24] 2025-07-27 02:47:53,246 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 22:48:24] 2025-07-27 02:47:53,247 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 22:48:24] 2025-07-27 02:47:53,247 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 22:48:24] 2025-07-27 02:47:53,247 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 22:48:24] 2025-07-27 02:47:53,247 | INFO     | aborting loop
[2025-07-26 22:48:24] 2025-07-27 02:47:53,953 | INFO     | all payload control threads have been joined
[2025-07-26 22:48:24] 2025-07-27 02:47:53,969 | INFO     | all data control threads have been joined
[2025-07-26 22:48:24] 2025-07-27 02:47:54,251 | INFO     | [job] retrieve thread has finished
[2025-07-26 22:48:24] 2025-07-27 02:47:54,252 | INFO     | [job] job monitor thread has finished
[2025-07-26 22:48:24] 2025-07-27 02:47:54,252 | INFO     | [job] queue monitor thread has finished
[2025-07-26 22:48:24] 2025-07-27 02:47:54,293 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 22:48:24] 2025-07-27 02:47:54,480 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 22:48:24] 2025-07-27 02:47:54,854 | INFO     | [payload] validate_post thread has finished
[2025-07-26 22:48:24] 2025-07-27 02:47:54,888 | INFO     | [data] copytool_in thread has finished
[2025-07-26 22:48:24] 2025-07-27 02:47:54,905 | INFO     | all job control threads have been joined
[2025-07-26 22:48:24] 2025-07-27 02:47:54,958 | INFO     | [payload] control thread has finished
[2025-07-26 22:48:24] 2025-07-27 02:47:54,974 | INFO     | [data] control thread has finished
[2025-07-26 22:48:24] 2025-07-27 02:47:55,035 | INFO     | [job] validate thread has finished
[2025-07-26 22:48:24] 2025-07-27 02:47:55,182 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 22:48:24] 2025-07-27 02:47:55,332 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 22:48:24] 2025-07-27 02:47:55,518 | INFO     | [payload] failed_post thread has finished
[2025-07-26 22:48:24] 2025-07-27 02:47:55,910 | INFO     | [job] control thread has finished
[2025-07-26 22:48:24] 2025-07-27 02:47:56,485 | INFO     | [data] copytool_out thread has finished
[2025-07-26 22:48:24] 2025-07-27 02:47:57,252 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 22:48:24] 2025-07-27 02:48:03,640 | INFO     | job.realtimelogging is not enabled
[2025-07-26 22:48:24] 2025-07-27 02:48:04,645 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 22:48:24] 2025-07-27 02:48:05,934 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140293023586112)>', '<ExcThread(monitor, started 140292539799296)>']
[2025-07-26 22:48:24] 2025-07-27 02:48:10,959 | INFO     | all workflow threads have been joined
[2025-07-26 22:48:24] 2025-07-27 02:48:10,961 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 22:48:24] 2025-07-27 02:48:10,961 | INFO     | traces error code: 0
[2025-07-26 22:48:24] 2025-07-27 02:48:10,961 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 22:48:24] 2025-07-27 02:48:24,096 | INFO     | PID=1482732 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 22:48:24] 2025-07-27 02:48:24,096 | INFO     | .. there are 15 such processes running
[2025-07-26 22:48:24] 2025-07-27 02:48:24,097 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 22:48:24] 2025-07-27 02:48:24,097 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 22:48:24] 2025-07-27 02:48:24,097 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 22:48:24] 2025-07-27 02:48:24,097 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 22:48:24] 2025-07-27 02:48:24,097 | INFO     | [monitor] control thread has ended
[2025-07-26 22:48:24] 2025-07-27 02:48:24,164 [wrapper] ==== pilot stdout END ====
[2025-07-26 22:48:24] 2025-07-27 02:48:24,167 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 22:48:24] 2025-07-27 02:48:24,170 [wrapper] pilotpid: 1482732
[2025-07-26 22:48:24] 2025-07-27 02:48:24,172 [wrapper] Pilot exit status: 0
[2025-07-26 22:48:24] 2025-07-27 02:48:24,182 [wrapper] pandaids: 6745502399
[2025-07-26 22:48:24] 2025-07-27 02:48:24,248 [wrapper] cleanup supervisor_pilot 1606260 1482733
[2025-07-26 22:48:24] 2025-07-27 02:48:24,251 [wrapper] Test setup, not cleaning
[2025-07-26 22:48:24] 2025-07-27 02:48:24,254 [wrapper] apfmon messages muted
[2025-07-26 22:48:24] 2025-07-27 02:48:24,257 [wrapper] ==== wrapper stdout END ====
[2025-07-26 22:48:24] 2025-07-27 02:48:24,262 [wrapper] ==== wrapper stderr END ====
[2025-07-26 22:48:24]  *** Error codes and diagnostics ***
[2025-07-26 22:48:24]     "exeErrorCode": 0,
[2025-07-26 22:48:24]     "exeErrorDiag": "",
[2025-07-26 22:48:24]     "pilotErrorCode": 0,
[2025-07-26 22:48:24]     "pilotErrorDiag": "",
[2025-07-26 22:48:24]  *** Listing of results directory ***
[2025-07-26 22:48:24] total 355364
[2025-07-26 22:48:24] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 16:19 pilot3.tar.gz
[2025-07-26 22:48:24] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 16:27 queuedata.json
[2025-07-26 22:48:24] -rwx------. 1 boincer umatlas     36292 Jul 26 16:28 runpilot2-wrapper.sh
[2025-07-26 22:48:24] -rw-r--r--. 1 boincer umatlas       100 Jul 26 21:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 22:48:24] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 21:34 run_atlas
[2025-07-26 22:48:24] -rw-r--r--. 1 boincer umatlas       105 Jul 26 21:34 job.xml
[2025-07-26 22:48:24] -rw-r--r--. 2 boincer umatlas 148125197 Jul 26 21:34 EVNT.45743347._002508.pool.root.1
[2025-07-26 22:48:24] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 21:34 start_atlas.sh
[2025-07-26 22:48:24] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 21:34 shared
[2025-07-26 22:48:24] -rw-r--r--. 2 boincer umatlas    542896 Jul 26 21:34 input.tar.gz
[2025-07-26 22:48:24] -rw-r--r--. 1 boincer umatlas         0 Jul 26 21:34 boinc_lockfile
[2025-07-26 22:48:24] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 21:34 pandaJob.out
[2025-07-26 22:48:24] -rw-------. 1 boincer umatlas    980125 Jul 26 21:34 agis_schedconf.cvmfs.json
[2025-07-26 22:48:24] -rw-------. 1 boincer umatlas   1593052 Jul 26 21:34 agis_ddmendpoints.agis.ALL.json
[2025-07-26 22:48:24] drwx------. 4 boincer umatlas      4096 Jul 26 21:34 pilot3
[2025-07-26 22:48:24] -rw-r--r--. 1 boincer umatlas      6944 Jul 26 22:38 init_data.xml
[2025-07-26 22:48:24] -rw-r--r--. 1 boincer umatlas       530 Jul 26 22:47 boinc_task_state.xml
[2025-07-26 22:48:24] -rw-------. 1 boincer umatlas 210418932 Jul 26 22:47 HITS.45743349._043928.pool.root.1
[2025-07-26 22:48:24] -rw-------. 1 boincer umatlas      1033 Jul 26 22:47 memory_monitor_summary.json
[2025-07-26 22:48:24] -rw-------. 1 boincer umatlas    297771 Jul 26 22:47 log.45743349._043928.job.log.tgz.1
[2025-07-26 22:48:24] -rw-------. 1 boincer umatlas      7771 Jul 26 22:47 heartbeat.json
[2025-07-26 22:48:24] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 22:48 boinc_mmap_file
[2025-07-26 22:48:24] -rw-r--r--. 1 boincer umatlas        27 Jul 26 22:48 wrapper_checkpoint.txt
[2025-07-26 22:48:24] -rw-------. 1 boincer umatlas       823 Jul 26 22:48 pilotlog.txt
[2025-07-26 22:48:24] -rw-------. 1 boincer umatlas        95 Jul 26 22:48 pilot_heartbeat.json
[2025-07-26 22:48:24] -rw-------. 1 boincer umatlas    436140 Jul 26 22:48 log.45743349._043928.job.log.1
[2025-07-26 22:48:24] -rw-------. 1 boincer umatlas       357 Jul 26 22:48 output.list
[2025-07-26 22:48:24] -rw-r--r--. 1 boincer umatlas       620 Jul 26 22:48 runtime_log
[2025-07-26 22:48:24] -rw-------. 1 boincer umatlas    757760 Jul 26 22:48 result.tar.gz
[2025-07-26 22:48:24] -rw-------. 1 boincer umatlas       651 Jul 26 22:48 ZdRNDmLg0z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm02SLDmNyTwlm.diag
[2025-07-26 22:48:24] -rw-r--r--. 1 boincer umatlas      8660 Jul 26 22:48 runtime_log.err
[2025-07-26 22:48:24] -rw-r--r--. 1 boincer umatlas     21450 Jul 26 22:48 stderr.txt
[2025-07-26 22:48:24] HITS file was successfully produced:
[2025-07-26 22:48:24] -rw-------. 1 boincer umatlas 210418932 Jul 26 22:47 shared/HITS.pool.root.1
[2025-07-26 22:48:24]  *** Contents of shared directory: ***
[2025-07-26 22:48:24] total 351440
[2025-07-26 22:48:24] -rw-r--r--. 2 boincer umatlas 148125197 Jul 26 21:34 ATLAS.root_0
[2025-07-26 22:48:24] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 21:34 start_atlas.sh
[2025-07-26 22:48:24] -rw-r--r--. 2 boincer umatlas    542896 Jul 26 21:34 input.tar.gz
[2025-07-26 22:48:24] -rw-------. 1 boincer umatlas 210418932 Jul 26 22:47 HITS.pool.root.1
[2025-07-26 22:48:24] -rw-------. 1 boincer umatlas    757760 Jul 26 22:48 result.tar.gz
22:48:26 (1479064): run_atlas exited; CPU time 32619.568094
22:48:26 (1479064): called boinc_finish(0)

</stderr_txt>
]]>

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