Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:20:41 (3375100): wrapper (7.7.26015): starting
21:20:41 (3375100): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 21:20:41] Arguments: --nthreads 8
[2025-07-26 21:20:41] Threads: 8
[2025-07-26 21:20:41] Checking for CVMFS
[2025-07-26 21:20:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 21:20:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 21:20:41] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 21:20:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 21:20:41] 2.13.1.0 285388 7707 90924 148795 2 188 11034733 40960001 11878 16776704 0 103417699 99.999 306990 30742 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 21:20:41] CVMFS is ok
[2025-07-26 21:20:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 21:20:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 21:20:41] Further information can be found at the LHC@home message board.
[2025-07-26 21:20:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 21:20:41] Checking for apptainer binary...
[2025-07-26 21:20:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 21:20:41] Running /usr/bin/apptainer --version
[2025-07-26 21:20:41] apptainer version 1.4.1-1.el9
[2025-07-26 21:20:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 21:20:41] c-208-36.aglt2.org
[2025-07-26 21:20:41] apptainer works
[2025-07-26 21:20:41] Set ATHENA_PROC_NUMBER=8
[2025-07-26 21:20:41] Set ATHENA_CORE_NUMBER=8
[2025-07-26 21:20:41] Starting ATLAS job with PandaID=6745502522
[2025-07-26 21:20:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 22:14:20]  *** The last 200 lines of the pilot log: ***
[2025-07-26 22:14:20]  mtime=0
[2025-07-26 22:14:20]  protocol_id=None
[2025-07-26 22:14:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 22:14:20]  replicas=None
[2025-07-26 22:14:20]  scope=mc23_13p6TeV
[2025-07-26 22:14:20]  status=None
[2025-07-26 22:14:20]  status_code=0
[2025-07-26 22:14:20]  storage_token=
[2025-07-26 22:14:20]  surl=/tmp/boinchome/slots/8/PanDA_Pilot-6745502522/log.45743349._044051.job.log.tgz.1
[2025-07-26 22:14:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ec/69/log.45743349._044051.job.log.tgz.1
[2025-07-26 22:14:20]  workdir=None
[2025-07-26 22:14:20] ]
[2025-07-26 22:14:20] 2025-07-27 02:13:40,269 | INFO     | transferring file log.45743349._044051.job.log.tgz.1 from /tmp/boinchome/slots/8/PanDA_Pilot-6745502522/log.45743349._044051.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 22:14:20] 2025-07-27 02:13:40,269 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/8/PanDA_Pilot-6745502522/log.45743349._044051.job.log.tgz.1 /tmp/boinchome/slots/8/log.45743349._044051.job
[2025-07-26 22:14:20] 2025-07-27 02:13:40,286 | INFO     | adding to output.list: log.45743349._044051.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ec/69/log.45743349._044051.job.log.tg
[2025-07-26 22:14:20] 2025-07-27 02:13:40,286 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 22:14:20] 2025-07-27 02:13:40,287 | INFO     | summary of transferred files:
[2025-07-26 22:14:20] 2025-07-27 02:13:40,287 | INFO     |  -- lfn=log.45743349._044051.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 22:14:20] 2025-07-27 02:13:40,287 | INFO     | stage-out finished correctly
[2025-07-26 22:14:20] 2025-07-27 02:13:42,647 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 22:14:20] 2025-07-27 02:13:43,679 | INFO     | PID=3378698 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 22:14:20] 2025-07-27 02:13:43,679 | INFO     | .. there are 16 such processes running
[2025-07-26 22:14:20] 2025-07-27 02:13:44,936 | INFO     | job 6745502522 has state=finished
[2025-07-26 22:14:20] 2025-07-27 02:13:44,937 | INFO     | preparing for final server update for job 6745502522 in state='finished'
[2025-07-26 22:14:20] 2025-07-27 02:13:44,937 | INFO     | this job has now completed (state=finished)
[2025-07-26 22:14:20] 2025-07-27 02:13:44,937 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 22:14:20] 2025-07-27 02:13:44,937 | INFO     | log transfer has been attempted: DONE
[2025-07-26 22:14:20] 2025-07-27 02:13:44,937 | INFO     | job 6745502522 has finished - writing final server update
[2025-07-26 22:14:20] 2025-07-27 02:13:44,938 | INFO     | total number of processed events: 400 (read)
[2025-07-26 22:14:20] 2025-07-27 02:13:44,938 | INFO     | executing command: lscpu
[2025-07-26 22:14:20] 2025-07-27 02:13:44,993 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 22:14:20] 2025-07-27 02:13:46,158 | WARNING  | process 3389164 can no longer be monitored (due to stat problems) - aborting
[2025-07-26 22:14:20] 2025-07-27 02:13:46,159 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6745502522/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 22:14:20] 2025-07-27 02:13:46,486 | INFO     | number of running child processes to parent process 3389164: 1
[2025-07-26 22:14:20] 2025-07-27 02:13:46,486 | INFO     | maximum number of monitored processes: 6
[2025-07-26 22:14:20] 2025-07-27 02:13:48,018 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 22:14:20] 2025-07-27 02:13:48,023 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3752.70371875
[2025-07-26 22:14:20] 2025-07-27 02:13:48,036 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6745502522/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 22:14:20] 2025-07-27 02:13:48,036 | INFO     | extracted standard info from prmon json
[2025-07-26 22:14:20] 2025-07-27 02:13:48,036 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 22:14:20] 2025-07-27 02:13:48,036 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 22:14:20] 2025-07-27 02:13:48,036 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 22:14:20] 2025-07-27 02:13:48,036 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 22:14:20] 2025-07-27 02:13:48,037 | INFO     | fitting pss+swap vs Time
[2025-07-26 22:14:20] 2025-07-27 02:13:48,037 | INFO     | sum of square deviations: 28242390.0
[2025-07-26 22:14:20] 2025-07-27 02:13:48,037 | INFO     | sum of deviations: -255349904.0
[2025-07-26 22:14:20] 2025-07-27 02:13:48,037 | INFO     | mean x: 1753580920.0
[2025-07-26 22:14:20] 2025-07-27 02:13:48,037 | INFO     | mean y: 2556411.888888889
[2025-07-26 22:14:20] 2025-07-27 02:13:48,038 | INFO     | -- intersect: 15857330727.31445
[2025-07-26 22:14:20] 2025-07-27 02:13:48,038 | INFO     | intersect: 15857330727.31445
[2025-07-26 22:14:20] 2025-07-27 02:13:48,038 | INFO     | chi2: 0.00012903887991342516
[2025-07-26 22:14:20] 2025-07-27 02:13:48,038 | INFO     | -- intersect: 15857330727.31445
[2025-07-26 22:14:20] 2025-07-27 02:13:48,038 | INFO     | current memory leak: -9.04 B/s (using 45 data points, chi2=0.00)
[2025-07-26 22:14:20] 2025-07-27 02:13:48,038 | INFO     | could have reported an average CPU frequency of 3731 MHz (5 samples)
[2025-07-26 22:14:20] 2025-07-27 02:13:48,038 | INFO     | ..............................
[2025-07-26 22:14:20] 2025-07-27 02:13:48,038 | INFO     | . Timing measurements:
[2025-07-26 22:14:20] 2025-07-27 02:13:48,038 | INFO     | . get job = 0 s
[2025-07-26 22:14:20] 2025-07-27 02:13:48,038 | INFO     | . initial setup = 2 s
[2025-07-26 22:14:20] 2025-07-27 02:13:48,038 | INFO     | . payload setup = 4 s
[2025-07-26 22:14:20] 2025-07-27 02:13:48,038 | INFO     | . stage-in = 0 s
[2025-07-26 22:14:20] 2025-07-27 02:13:48,038 | INFO     | . payload execution = 3147 s
[2025-07-26 22:14:20] 2025-07-27 02:13:48,038 | INFO     | . stage-out = 0 s
[2025-07-26 22:14:20] 2025-07-27 02:13:48,038 | INFO     | . log creation = 0 s
[2025-07-26 22:14:20] 2025-07-27 02:13:48,038 | INFO     | ..............................
[2025-07-26 22:14:20] 2025-07-27 02:13:48,169 | INFO     | 
[2025-07-26 22:14:20] 2025-07-27 02:13:48,169 | INFO     | job summary report
[2025-07-26 22:14:20] 2025-07-27 02:13:48,169 | INFO     | --------------------------------------------------
[2025-07-26 22:14:20] 2025-07-27 02:13:48,169 | INFO     | PanDA job id: 6745502522
[2025-07-26 22:14:20] 2025-07-27 02:13:48,169 | INFO     | task id: 45743349
[2025-07-26 22:14:20] 2025-07-27 02:13:48,169 | INFO     | errors: (none)
[2025-07-26 22:14:20] 2025-07-27 02:13:48,169 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 22:14:20] 2025-07-27 02:13:48,169 | INFO     | pilot state: finished 
[2025-07-26 22:14:20] 2025-07-27 02:13:48,169 | INFO     | transexitcode: 0
[2025-07-26 22:14:20] 2025-07-27 02:13:48,169 | INFO     | exeerrorcode: 0
[2025-07-26 22:14:20] 2025-07-27 02:13:48,169 | INFO     | exeerrordiag: 
[2025-07-26 22:14:20] 2025-07-27 02:13:48,170 | INFO     | exitcode: 0
[2025-07-26 22:14:20] 2025-07-27 02:13:48,170 | INFO     | exitmsg: OK
[2025-07-26 22:14:20] 2025-07-27 02:13:48,170 | INFO     | cpuconsumptiontime: 23613 s
[2025-07-26 22:14:20] 2025-07-27 02:13:48,170 | INFO     | nevents: 400
[2025-07-26 22:14:20] 2025-07-27 02:13:48,170 | INFO     | neventsw: 0
[2025-07-26 22:14:20] 2025-07-27 02:13:48,170 | INFO     | pid: 3389164
[2025-07-26 22:14:20] 2025-07-27 02:13:48,170 | INFO     | pgrp: 3389164
[2025-07-26 22:14:20] 2025-07-27 02:13:48,170 | INFO     | corecount: 8
[2025-07-26 22:14:20] 2025-07-27 02:13:48,170 | INFO     | event service: False
[2025-07-26 22:14:20] 2025-07-27 02:13:48,170 | INFO     | sizes: {0: 2397197, 1: 2397452, 4: 2397714, 11: 2397742, 3156: 2432236, 3159: 2432236, 3164: 2432590}
[2025-07-26 22:14:20] 2025-07-27 02:13:48,170 | INFO     | --------------------------------------------------
[2025-07-26 22:14:20] 2025-07-27 02:13:48,170 | INFO     | 
[2025-07-26 22:14:20] 2025-07-27 02:13:48,170 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-07-26 22:14:20] 2025-07-27 02:13:48,185 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 22:14:20] 2025-07-27 02:13:48,185 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 22:14:20] 2025-07-27 02:13:48,185 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 22:14:20] 2025-07-27 02:13:48,185 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 22:14:20] 2025-07-27 02:13:48,185 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 22:14:20] 2025-07-27 02:13:48,185 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 22:14:20] 2025-07-27 02:13:48,186 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 22:14:20] 2025-07-27 02:13:48,186 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 22:14:20] 2025-07-27 02:13:48,186 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 22:14:20] 2025-07-27 02:13:48,186 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 22:14:20] 2025-07-27 02:13:48,186 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 22:14:20] 2025-07-27 02:13:48,186 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 22:14:20] 2025-07-27 02:13:48,186 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 22:14:20] 2025-07-27 02:13:48,186 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 22:14:20] 2025-07-27 02:13:48,186 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 22:14:20] 2025-07-27 02:13:48,186 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 22:14:20] 2025-07-27 02:13:48,186 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 22:14:20] 2025-07-27 02:13:48,186 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 22:14:20] 2025-07-27 02:13:48,186 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 22:14:20] 2025-07-27 02:13:48,186 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 22:14:20] 2025-07-27 02:13:48,186 | INFO     | job 6745502522 has completed (purged errors)
[2025-07-26 22:14:20] 2025-07-27 02:13:48,186 | INFO     | overall cleanup function is called
[2025-07-26 22:14:20] 2025-07-27 02:13:49,194 | INFO     | --- collectZombieJob: --- 10, [3389164]
[2025-07-26 22:14:20] 2025-07-27 02:13:49,194 | INFO     | zombie collector waiting for pid 3389164
[2025-07-26 22:14:20] 2025-07-27 02:13:49,194 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 22:14:20] 2025-07-27 02:13:49,194 | INFO     | collected zombie processes
[2025-07-26 22:14:20] 2025-07-27 02:13:49,194 | INFO     | will attempt to kill all subprocesses of pid=3389164
[2025-07-26 22:14:20] 2025-07-27 02:13:49,535 | INFO     | process IDs to be killed: [3389164] (in reverse order)
[2025-07-26 22:14:20] 2025-07-27 02:13:49,643 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 22:14:20] 2025-07-27 02:13:49,644 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 22:14:20] 2025-07-27 02:13:49,657 | INFO     | did not find any defunct processes belonging to 3389164
[2025-07-26 22:14:20] 2025-07-27 02:13:49,670 | INFO     | did not find any defunct processes belonging to 3389164
[2025-07-26 22:14:20] 2025-07-27 02:13:49,670 | INFO     | ready for new job
[2025-07-26 22:14:20] 2025-07-27 02:13:49,670 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 22:14:20] 2025-07-27 02:13:49,671 | INFO     | ***************************************
[2025-07-26 22:14:20] 2025-07-27 02:13:49,671 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 22:14:20] 2025-07-27 02:13:49,671 | INFO     | ***************************************
[2025-07-26 22:14:20] 2025-07-27 02:13:49,671 | INFO     | 
[2025-07-26 22:14:20] 2025-07-27 02:13:49,675 | INFO     | architecture information:
[2025-07-26 22:14:20] 2025-07-27 02:13:49,676 | INFO     | executing command: cat /etc/os-release
[2025-07-26 22:14:20] 2025-07-27 02:13:49,687 | INFO     | cat /etc/os-release:
[2025-07-26 22:14:20] NAME="CentOS Linux"
[2025-07-26 22:14:20] VERSION="7 (Core)"
[2025-07-26 22:14:20] ID="centos"
[2025-07-26 22:14:20] ID_LIKE="rhel fedora"
[2025-07-26 22:14:20] VERSION_ID="7"
[2025-07-26 22:14:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 22:14:20] ANSI_COLOR="0;31"
[2025-07-26 22:14:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 22:14:20] HOME_URL="https://www.centos.org/"
[2025-07-26 22:14:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 22:14:20] 
[2025-07-26 22:14:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 22:14:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 22:14:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 22:14:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 22:14:20] 
[2025-07-26 22:14:20] 2025-07-27 02:13:49,687 | INFO     | ***************************************
[2025-07-26 22:14:20] 2025-07-27 02:13:50,190 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-07-26 22:14:20] 2025-07-27 02:13:50,204 | INFO     | sufficient remaining disk space (164790009856 B)
[2025-07-26 22:14:20] 2025-07-27 02:13:50,205 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 22:14:20] 2025-07-27 02:13:50,205 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 22:14:20] 2025-07-27 02:13:50,205 | INFO     | update_server=False
[2025-07-26 22:14:20] 2025-07-27 02:13:50,205 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 22:14:20] 2025-07-27 02:13:50,205 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 22:14:20] 2025-07-27 02:13:50,205 | INFO     | aborting loop
[2025-07-26 22:14:20] 2025-07-27 02:13:50,536 | INFO     | all job control threads have been joined
[2025-07-26 22:14:20] 2025-07-27 02:13:50,558 | INFO     | all payload control threads have been joined
[2025-07-26 22:14:20] 2025-07-27 02:13:50,857 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 22:14:20] 2025-07-27 02:13:51,003 | INFO     | all data control threads have been joined
[2025-07-26 22:14:20] 2025-07-27 02:13:51,210 | INFO     | [job] job monitor thread has finished
[2025-07-26 22:14:20] 2025-07-27 02:13:51,210 | INFO     | [job] retrieve thread has finished
[2025-07-26 22:14:20] 2025-07-27 02:13:51,272 | INFO     | [payload] failed_post thread has finished
[2025-07-26 22:14:20] 2025-07-27 02:13:51,273 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 22:14:20] 2025-07-27 02:13:51,538 | INFO     | [job] control thread has finished
[2025-07-26 22:14:20] 2025-07-27 02:13:51,563 | INFO     | [payload] control thread has finished
[2025-07-26 22:14:20] 2025-07-27 02:13:51,640 | INFO     | [data] copytool_in thread has finished
[2025-07-26 22:14:20] 2025-07-27 02:13:52,008 | INFO     | [data] control thread has finished
[2025-07-26 22:14:20] 2025-07-27 02:13:52,021 | INFO     | [payload] validate_post thread has finished
[2025-07-26 22:14:20] 2025-07-27 02:13:52,303 | INFO     | [job] validate thread has finished
[2025-07-26 22:14:20] 2025-07-27 02:13:52,352 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 22:14:20] 2025-07-27 02:13:52,461 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 22:14:20] 2025-07-27 02:13:52,859 | INFO     | [data] copytool_out thread has finished
[2025-07-26 22:14:20] 2025-07-27 02:13:53,106 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 22:14:20] 2025-07-27 02:13:53,208 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 22:14:20] 2025-07-27 02:13:54,111 | INFO     | [job] queue monitor thread has finished
[2025-07-26 22:14:20] 2025-07-27 02:13:57,214 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 22:14:20] 2025-07-27 02:14:01,132 | INFO     | job.realtimelogging is not enabled
[2025-07-26 22:14:20] 2025-07-27 02:14:02,135 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 22:14:20] 2025-07-27 02:14:02,591 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140130805905216)>', '<ExcThread(monitor, started 140129809196800)>']
[2025-07-26 22:14:20] 2025-07-27 02:14:07,611 | INFO     | all workflow threads have been joined
[2025-07-26 22:14:20] 2025-07-27 02:14:07,611 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 22:14:20] 2025-07-27 02:14:07,612 | INFO     | traces error code: 0
[2025-07-26 22:14:20] 2025-07-27 02:14:07,612 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 22:14:20] 2025-07-27 02:14:20,158 | INFO     | PID=3378698 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 22:14:20] 2025-07-27 02:14:20,158 | INFO     | .. there are 16 such processes running
[2025-07-26 22:14:20] 2025-07-27 02:14:20,159 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 22:14:20] 2025-07-27 02:14:20,159 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 22:14:20] 2025-07-27 02:14:20,159 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 22:14:20] 2025-07-27 02:14:20,159 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 22:14:20] 2025-07-27 02:14:20,159 | CRITICAL | thread 'MainThread' is not alive
[2025-07-26 22:14:20] 2025-07-27 02:14:20,159 | INFO     | [monitor] control thread has ended
[2025-07-26 22:14:20] 2025-07-27 02:14:20,238 [wrapper] ==== pilot stdout END ====
[2025-07-26 22:14:20] 2025-07-27 02:14:20,241 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 22:14:20] 2025-07-27 02:14:20,243 [wrapper] pilotpid: 3378698
[2025-07-26 22:14:20] 2025-07-27 02:14:20,246 [wrapper] Pilot exit status: 0
[2025-07-26 22:14:20] 2025-07-27 02:14:20,256 [wrapper] pandaids: 6745502522
[2025-07-26 22:14:20] 2025-07-27 02:14:20,336 [wrapper] cleanup supervisor_pilot 3635135 3378699
[2025-07-26 22:14:20] 2025-07-27 02:14:20,340 [wrapper] Test setup, not cleaning
[2025-07-26 22:14:20] 2025-07-27 02:14:20,343 [wrapper] apfmon messages muted
[2025-07-26 22:14:20] 2025-07-27 02:14:20,345 [wrapper] ==== wrapper stdout END ====
[2025-07-26 22:14:20] 2025-07-27 02:14:20,348 [wrapper] ==== wrapper stderr END ====
[2025-07-26 22:14:20]  *** Error codes and diagnostics ***
[2025-07-26 22:14:20]     "exeErrorCode": 0,
[2025-07-26 22:14:20]     "exeErrorDiag": "",
[2025-07-26 22:14:20]     "pilotErrorCode": 0,
[2025-07-26 22:14:20]     "pilotErrorDiag": "",
[2025-07-26 22:14:20]  *** Listing of results directory ***
[2025-07-26 22:14:20] total 348804
[2025-07-26 22:14:20] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 16:19 pilot3.tar.gz
[2025-07-26 22:14:20] -rwx------. 1 boincer umatlas     36292 Jul 26 16:33 runpilot2-wrapper.sh
[2025-07-26 22:14:20] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 16:33 queuedata.json
[2025-07-26 22:14:20] -rw-r--r--. 1 boincer umatlas       100 Jul 26 21:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 22:14:20] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 21:20 run_atlas
[2025-07-26 22:14:20] -rw-r--r--. 1 boincer umatlas       105 Jul 26 21:20 job.xml
[2025-07-26 22:14:20] -rw-r--r--. 2 boincer umatlas 143989069 Jul 26 21:20 EVNT.45743347._002516.pool.root.1
[2025-07-26 22:14:20] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 21:20 start_atlas.sh
[2025-07-26 22:14:20] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 21:20 shared
[2025-07-26 22:14:20] -rw-r--r--. 2 boincer umatlas    542891 Jul 26 21:20 input.tar.gz
[2025-07-26 22:14:20] -rw-r--r--. 1 boincer umatlas         0 Jul 26 21:20 boinc_lockfile
[2025-07-26 22:14:20] -rw-r--r--. 1 boincer umatlas      2562 Jul 26 21:20 pandaJob.out
[2025-07-26 22:14:20] -rw-------. 1 boincer umatlas    980125 Jul 26 21:20 agis_schedconf.cvmfs.json
[2025-07-26 22:14:20] -rw-------. 1 boincer umatlas   1593052 Jul 26 21:20 agis_ddmendpoints.agis.ALL.json
[2025-07-26 22:14:20] drwx------. 4 boincer umatlas      4096 Jul 26 21:20 pilot3
[2025-07-26 22:14:20] -rw-r--r--. 1 boincer umatlas      7173 Jul 26 22:09 init_data.xml
[2025-07-26 22:14:20] -rw-------. 1 boincer umatlas 208078159 Jul 26 22:13 HITS.45743349._044051.pool.root.1
[2025-07-26 22:14:20] -rw-r--r--. 1 boincer umatlas       529 Jul 26 22:13 boinc_task_state.xml
[2025-07-26 22:14:20] -rw-------. 1 boincer umatlas      1029 Jul 26 22:13 memory_monitor_summary.json
[2025-07-26 22:14:20] -rw-------. 1 boincer umatlas    286666 Jul 26 22:13 log.45743349._044051.job.log.tgz.1
[2025-07-26 22:14:20] -rw-------. 1 boincer umatlas      7762 Jul 26 22:13 heartbeat.json
[2025-07-26 22:14:20] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 22:14 boinc_mmap_file
[2025-07-26 22:14:20] -rw-r--r--. 1 boincer umatlas        27 Jul 26 22:14 wrapper_checkpoint.txt
[2025-07-26 22:14:20] -rw-------. 1 boincer umatlas        95 Jul 26 22:14 pilot_heartbeat.json
[2025-07-26 22:14:20] -rw-------. 1 boincer umatlas       893 Jul 26 22:14 pilotlog.txt
[2025-07-26 22:14:20] -rw-------. 1 boincer umatlas    329906 Jul 26 22:14 log.45743349._044051.job.log.1
[2025-07-26 22:14:20] -rw-------. 1 boincer umatlas       357 Jul 26 22:14 output.list
[2025-07-26 22:14:20] -rw-r--r--. 1 boincer umatlas       620 Jul 26 22:14 runtime_log
[2025-07-26 22:14:20] -rw-------. 1 boincer umatlas    634880 Jul 26 22:14 result.tar.gz
[2025-07-26 22:14:20] -rw-r--r--. 1 boincer umatlas      8660 Jul 26 22:14 runtime_log.err
[2025-07-26 22:14:20] -rw-------. 1 boincer umatlas       651 Jul 26 22:14 qeTLDmPl0z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm33SLDmyoxFem.diag
[2025-07-26 22:14:20] -rw-r--r--. 1 boincer umatlas     21743 Jul 26 22:14 stderr.txt
[2025-07-26 22:14:20] HITS file was successfully produced:
[2025-07-26 22:14:20] -rw-------. 1 boincer umatlas 208078159 Jul 26 22:13 shared/HITS.pool.root.1
[2025-07-26 22:14:20]  *** Contents of shared directory: ***
[2025-07-26 22:14:20] total 344996
[2025-07-26 22:14:20] -rw-r--r--. 2 boincer umatlas 143989069 Jul 26 21:20 ATLAS.root_0
[2025-07-26 22:14:20] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 21:20 start_atlas.sh
[2025-07-26 22:14:20] -rw-r--r--. 2 boincer umatlas    542891 Jul 26 21:20 input.tar.gz
[2025-07-26 22:14:20] -rw-------. 1 boincer umatlas 208078159 Jul 26 22:13 HITS.pool.root.1
[2025-07-26 22:14:20] -rw-------. 1 boincer umatlas    634880 Jul 26 22:14 result.tar.gz
22:14:22 (3375100): run_atlas exited; CPU time 23675.372931
22:14:22 (3375100): called boinc_finish(0)

</stderr_txt>
]]>

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