Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:59:01 (20994): wrapper (7.7.26015): starting
20:59:01 (20994): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 20:59:02] Arguments: --nthreads 12
[2025-07-26 20:59:02] Threads: 12
[2025-07-26 20:59:02] Checking for CVMFS
[2025-07-26 20:59:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 20:59:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 20:59:02] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 20:59:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 20:59:02] 2.11.2.0 3081 111265 99852 148794 3 59 14639040 20275200 1 130560 0 37515378 99.969 9607184 10504 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 20:59:02] CVMFS is ok
[2025-07-26 20:59:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 20:59:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 20:59:02] Further information can be found at the LHC@home message board.
[2025-07-26 20:59:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 20:59:02] Checking for apptainer binary...
[2025-07-26 20:59:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 20:59:02] Running /usr/bin/apptainer --version
[2025-07-26 20:59:02] apptainer version 1.3.2-1.el7
[2025-07-26 20:59:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 20:59:03] c-205-29.aglt2.org
[2025-07-26 20:59:03] apptainer works
[2025-07-26 20:59:03] Set ATHENA_PROC_NUMBER=12
[2025-07-26 20:59:03] Set ATHENA_CORE_NUMBER=12
[2025-07-26 20:59:03] Starting ATLAS job with PandaID=6745388484
[2025-07-26 20:59:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 22:25:03]  *** The last 200 lines of the pilot log: ***
[2025-07-26 22:25:03]  mtime=0
[2025-07-26 22:25:03]  protocol_id=None
[2025-07-26 22:25:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 22:25:03]  replicas=None
[2025-07-26 22:25:03]  scope=mc23_13p6TeV
[2025-07-26 22:25:03]  status=None
[2025-07-26 22:25:03]  status_code=0
[2025-07-26 22:25:03]  storage_token=
[2025-07-26 22:25:03]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745388484/log.45743349._043533.job.log.tgz.1
[2025-07-26 22:25:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7e/d9/log.45743349._043533.job.log.tgz.1
[2025-07-26 22:25:03]  workdir=None
[2025-07-26 22:25:03] ]
[2025-07-26 22:25:03] 2025-07-27 02:24:42,783 | INFO     | transferring file log.45743349._043533.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745388484/log.45743349._043533.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 22:25:03] 2025-07-27 02:24:42,784 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745388484/log.45743349._043533.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._043533.job
[2025-07-26 22:25:03] 2025-07-27 02:24:42,807 | INFO     | adding to output.list: log.45743349._043533.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7e/d9/log.45743349._043533.job.log.tg
[2025-07-26 22:25:03] 2025-07-27 02:24:42,808 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 22:25:03] 2025-07-27 02:24:42,808 | INFO     | summary of transferred files:
[2025-07-26 22:25:03] 2025-07-27 02:24:42,808 | INFO     |  -- lfn=log.45743349._043533.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 22:25:03] 2025-07-27 02:24:42,809 | INFO     | stage-out finished correctly
[2025-07-26 22:25:03] 2025-07-27 02:24:42,895 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 22:25:03] 2025-07-27 02:24:44,231 | WARNING  | process 31082 can no longer be monitored (due to stat problems) - aborting
[2025-07-26 22:25:03] 2025-07-27 02:24:44,231 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745388484/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 22:25:03] 2025-07-27 02:24:44,382 | INFO     | number of running child processes to parent process 31082: 1
[2025-07-26 22:25:03] 2025-07-27 02:24:44,383 | INFO     | maximum number of monitored processes: 6
[2025-07-26 22:25:03] 2025-07-27 02:24:44,440 | INFO     | PID=24590 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 22:25:03] 2025-07-27 02:24:45,542 | INFO     | job 6745388484 has state=finished
[2025-07-26 22:25:03] 2025-07-27 02:24:45,542 | INFO     | preparing for final server update for job 6745388484 in state='finished'
[2025-07-26 22:25:03] 2025-07-27 02:24:45,542 | INFO     | this job has now completed (state=finished)
[2025-07-26 22:25:03] 2025-07-27 02:24:45,543 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 22:25:03] 2025-07-27 02:24:45,543 | INFO     | log transfer has been attempted: DONE
[2025-07-26 22:25:03] 2025-07-27 02:24:45,543 | INFO     | job 6745388484 has finished - writing final server update
[2025-07-26 22:25:03] 2025-07-27 02:24:45,543 | INFO     | total number of processed events: 400 (read)
[2025-07-26 22:25:03] 2025-07-27 02:24:45,544 | INFO     | executing command: lscpu
[2025-07-26 22:25:03] 2025-07-27 02:24:45,571 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 22:25:03] 2025-07-27 02:24:46,886 | INFO     | monitor loop #382: job 0:6745388484 is in state 'finished'
[2025-07-26 22:25:03] 2025-07-27 02:24:46,886 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 22:25:03] 2025-07-27 02:24:49,389 | INFO     | monitor loop #383: job 0:6745388484 is in state 'finished'
[2025-07-26 22:25:03] 2025-07-27 02:24:49,390 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 22:25:03] 2025-07-27 02:24:50,967 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-26 22:25:03] 2025-07-27 02:24:50,971 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-07-26 22:25:03] 2025-07-27 02:24:50,973 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745388484/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 22:25:03] 2025-07-27 02:24:50,974 | INFO     | extracted standard info from prmon json
[2025-07-26 22:25:03] 2025-07-27 02:24:50,974 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 22:25:03] 2025-07-27 02:24:50,975 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 22:25:03] 2025-07-27 02:24:50,975 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 22:25:03] 2025-07-27 02:24:50,975 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 22:25:03] 2025-07-27 02:24:50,977 | INFO     | fitting pss+swap vs Time
[2025-07-26 22:25:03] 2025-07-27 02:24:50,977 | INFO     | sum of square deviations: 141539398.0
[2025-07-26 22:25:03] 2025-07-27 02:24:50,977 | INFO     | sum of deviations: -3208570415.0000005
[2025-07-26 22:25:03] 2025-07-27 02:24:50,977 | INFO     | mean x: 1753580611.0
[2025-07-26 22:25:03] 2025-07-27 02:24:50,977 | INFO     | mean y: 2716426.5064935065
[2025-07-26 22:25:03] 2025-07-27 02:24:50,978 | INFO     | -- intersect: 39754806291.77654
[2025-07-26 22:25:03] 2025-07-27 02:24:50,978 | INFO     | intersect: 39754806291.77654
[2025-07-26 22:25:03] 2025-07-27 02:24:50,978 | INFO     | chi2: 0.04742836707929677
[2025-07-26 22:25:03] 2025-07-27 02:24:50,978 | INFO     | -- intersect: 39754806291.77654
[2025-07-26 22:25:03] 2025-07-27 02:24:50,978 | INFO     | current memory leak: -22.67 B/s (using 77 data points, chi2=0.05)
[2025-07-26 22:25:03] 2025-07-27 02:24:50,978 | INFO     | could have reported an average CPU frequency of 2023 MHz (6 samples)
[2025-07-26 22:25:03] 2025-07-27 02:24:50,979 | INFO     | ..............................
[2025-07-26 22:25:03] 2025-07-27 02:24:50,979 | INFO     | . Timing measurements:
[2025-07-26 22:25:03] 2025-07-27 02:24:50,979 | INFO     | . get job = 0 s
[2025-07-26 22:25:03] 2025-07-27 02:24:50,979 | INFO     | . initial setup = 2 s
[2025-07-26 22:25:03] 2025-07-27 02:24:50,979 | INFO     | . payload setup = 9 s
[2025-07-26 22:25:03] 2025-07-27 02:24:50,979 | INFO     | . stage-in = 0 s
[2025-07-26 22:25:03] 2025-07-27 02:24:50,979 | INFO     | . payload execution = 5094 s
[2025-07-26 22:25:03] 2025-07-27 02:24:50,979 | INFO     | . stage-out = 0 s
[2025-07-26 22:25:03] 2025-07-27 02:24:50,979 | INFO     | . log creation = 0 s
[2025-07-26 22:25:03] 2025-07-27 02:24:50,980 | INFO     | ..............................
[2025-07-26 22:25:03] 2025-07-27 02:24:51,499 | INFO     | 
[2025-07-26 22:25:03] 2025-07-27 02:24:51,500 | INFO     | job summary report
[2025-07-26 22:25:03] 2025-07-27 02:24:51,500 | INFO     | --------------------------------------------------
[2025-07-26 22:25:03] 2025-07-27 02:24:51,500 | INFO     | PanDA job id: 6745388484
[2025-07-26 22:25:03] 2025-07-27 02:24:51,500 | INFO     | task id: 45743349
[2025-07-26 22:25:03] 2025-07-27 02:24:51,500 | INFO     | errors: (none)
[2025-07-26 22:25:03] 2025-07-27 02:24:51,501 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 22:25:03] 2025-07-27 02:24:51,501 | INFO     | pilot state: finished 
[2025-07-26 22:25:03] 2025-07-27 02:24:51,501 | INFO     | transexitcode: 0
[2025-07-26 22:25:03] 2025-07-27 02:24:51,501 | INFO     | exeerrorcode: 0
[2025-07-26 22:25:03] 2025-07-27 02:24:51,501 | INFO     | exeerrordiag: 
[2025-07-26 22:25:03] 2025-07-27 02:24:51,501 | INFO     | exitcode: 0
[2025-07-26 22:25:03] 2025-07-27 02:24:51,501 | INFO     | exitmsg: OK
[2025-07-26 22:25:03] 2025-07-27 02:24:51,502 | INFO     | cpuconsumptiontime: 55903 s
[2025-07-26 22:25:03] 2025-07-27 02:24:51,502 | INFO     | nevents: 400
[2025-07-26 22:25:03] 2025-07-27 02:24:51,502 | INFO     | neventsw: 0
[2025-07-26 22:25:03] 2025-07-27 02:24:51,502 | INFO     | pid: 31082
[2025-07-26 22:25:03] 2025-07-27 02:24:51,502 | INFO     | pgrp: 31082
[2025-07-26 22:25:03] 2025-07-27 02:24:51,502 | INFO     | corecount: 12
[2025-07-26 22:25:03] 2025-07-27 02:24:51,503 | INFO     | event service: False
[2025-07-26 22:25:03] 2025-07-27 02:24:51,503 | INFO     | sizes: {0: 2397475, 5: 2397737, 11: 2397793, 5107: 2424231, 5109: 2433285, 5117: 2433423}
[2025-07-26 22:25:03] 2025-07-27 02:24:51,503 | INFO     | --------------------------------------------------
[2025-07-26 22:25:03] 2025-07-27 02:24:51,503 | INFO     | 
[2025-07-26 22:25:03] 2025-07-27 02:24:51,503 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 22:25:03] 2025-07-27 02:24:51,529 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 22:25:03] 2025-07-27 02:24:51,529 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 22:25:03] 2025-07-27 02:24:51,529 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 22:25:03] 2025-07-27 02:24:51,529 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 22:25:03] 2025-07-27 02:24:51,530 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 22:25:03] 2025-07-27 02:24:51,530 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 22:25:03] 2025-07-27 02:24:51,530 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 22:25:03] 2025-07-27 02:24:51,530 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 22:25:03] 2025-07-27 02:24:51,530 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 22:25:03] 2025-07-27 02:24:51,530 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 22:25:03] 2025-07-27 02:24:51,531 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 22:25:03] 2025-07-27 02:24:51,531 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 22:25:03] 2025-07-27 02:24:51,531 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 22:25:03] 2025-07-27 02:24:51,531 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 22:25:03] 2025-07-27 02:24:51,531 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 22:25:03] 2025-07-27 02:24:51,532 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 22:25:03] 2025-07-27 02:24:51,532 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 22:25:03] 2025-07-27 02:24:51,532 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 22:25:03] 2025-07-27 02:24:51,532 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 22:25:03] 2025-07-27 02:24:51,532 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 22:25:03] 2025-07-27 02:24:51,532 | INFO     | job 6745388484 has completed (purged errors)
[2025-07-26 22:25:03] 2025-07-27 02:24:51,533 | INFO     | overall cleanup function is called
[2025-07-26 22:25:03] 2025-07-27 02:24:52,540 | INFO     | --- collectZombieJob: --- 10, [31082]
[2025-07-26 22:25:03] 2025-07-27 02:24:52,540 | INFO     | zombie collector waiting for pid 31082
[2025-07-26 22:25:03] 2025-07-27 02:24:52,541 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 22:25:03] 2025-07-27 02:24:52,541 | INFO     | collected zombie processes
[2025-07-26 22:25:03] 2025-07-27 02:24:52,541 | INFO     | will attempt to kill all subprocesses of pid=31082
[2025-07-26 22:25:03] 2025-07-27 02:24:52,635 | INFO     | process IDs to be killed: [31082] (in reverse order)
[2025-07-26 22:25:03] 2025-07-27 02:24:52,685 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 22:25:03] 2025-07-27 02:24:52,686 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 22:25:03] 2025-07-27 02:24:52,696 | INFO     | did not find any defunct processes belonging to 31082
[2025-07-26 22:25:03] 2025-07-27 02:24:52,699 | INFO     | did not find any defunct processes belonging to 31082
[2025-07-26 22:25:03] 2025-07-27 02:24:52,699 | INFO     | ready for new job
[2025-07-26 22:25:03] 2025-07-27 02:24:52,699 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 22:25:03] 2025-07-27 02:24:52,700 | INFO     | ***************************************
[2025-07-26 22:25:03] 2025-07-27 02:24:52,700 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 22:25:03] 2025-07-27 02:24:52,700 | INFO     | ***************************************
[2025-07-26 22:25:03] 2025-07-27 02:24:52,700 | INFO     | 
[2025-07-26 22:25:03] 2025-07-27 02:24:52,701 | INFO     | architecture information:
[2025-07-26 22:25:03] 2025-07-27 02:24:52,701 | INFO     | executing command: cat /etc/os-release
[2025-07-26 22:25:03] 2025-07-27 02:24:52,716 | INFO     | cat /etc/os-release:
[2025-07-26 22:25:03] NAME="CentOS Linux"
[2025-07-26 22:25:03] VERSION="7 (Core)"
[2025-07-26 22:25:03] ID="centos"
[2025-07-26 22:25:03] ID_LIKE="rhel fedora"
[2025-07-26 22:25:03] VERSION_ID="7"
[2025-07-26 22:25:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 22:25:03] ANSI_COLOR="0;31"
[2025-07-26 22:25:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 22:25:03] HOME_URL="https://www.centos.org/"
[2025-07-26 22:25:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 22:25:03] 
[2025-07-26 22:25:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 22:25:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 22:25:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 22:25:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 22:25:03] 
[2025-07-26 22:25:03] 2025-07-27 02:24:52,717 | INFO     | ***************************************
[2025-07-26 22:25:03] 2025-07-27 02:24:53,220 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 22:25:03] 2025-07-27 02:24:53,238 | INFO     | sufficient remaining disk space (29504831488 B)
[2025-07-26 22:25:03] 2025-07-27 02:24:53,238 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 22:25:03] 2025-07-27 02:24:53,238 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 22:25:03] 2025-07-27 02:24:53,238 | INFO     | update_server=False
[2025-07-26 22:25:03] 2025-07-27 02:24:53,239 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 22:25:03] 2025-07-27 02:24:53,239 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 22:25:03] 2025-07-27 02:24:53,239 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-26 22:25:03] 2025-07-27 02:24:53,240 | INFO     | aborting loop
[2025-07-26 22:25:03] 2025-07-27 02:24:53,240 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 22:25:03] 2025-07-27 02:24:53,240 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 22:25:03] 2025-07-27 02:24:53,240 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 22:25:03] 2025-07-27 02:24:53,409 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 22:25:03] 2025-07-27 02:24:53,494 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 22:25:03] 2025-07-27 02:24:53,511 | INFO     | all job control threads have been joined
[2025-07-26 22:25:03] 2025-07-27 02:24:53,718 | INFO     | all data control threads have been joined
[2025-07-26 22:25:03] 2025-07-27 02:24:54,082 | INFO     | all payload control threads have been joined
[2025-07-26 22:25:03] 2025-07-27 02:24:54,244 | INFO     | [job] retrieve thread has finished
[2025-07-26 22:25:03] 2025-07-27 02:24:54,245 | INFO     | [job] job monitor thread has finished
[2025-07-26 22:25:03] 2025-07-27 02:24:54,448 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 22:25:03] 2025-07-27 02:24:54,454 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 22:25:03] 2025-07-27 02:24:54,512 | INFO     | [job] control thread has finished
[2025-07-26 22:25:03] 2025-07-27 02:24:54,569 | INFO     | [payload] validate_post thread has finished
[2025-07-26 22:25:03] 2025-07-27 02:24:54,660 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 22:25:03] 2025-07-27 02:24:54,723 | INFO     | [data] control thread has finished
[2025-07-26 22:25:03] 2025-07-27 02:24:54,806 | INFO     | [payload] failed_post thread has finished
[2025-07-26 22:25:03] 2025-07-27 02:24:55,047 | INFO     | [data] copytool_in thread has finished
[2025-07-26 22:25:03] 2025-07-27 02:24:55,087 | INFO     | [payload] control thread has finished
[2025-07-26 22:25:03] 2025-07-27 02:24:55,195 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 22:25:03] 2025-07-27 02:24:55,415 | INFO     | [data] copytool_out thread has finished
[2025-07-26 22:25:03] 2025-07-27 02:24:55,479 | INFO     | [job] validate thread has finished
[2025-07-26 22:25:03] 2025-07-27 02:24:56,074 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 22:25:03] 2025-07-27 02:24:57,080 | INFO     | [job] queue monitor thread has finished
[2025-07-26 22:25:03] 2025-07-27 02:24:57,499 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 22:25:03] 2025-07-27 02:24:58,498 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140011788289856)>', '<ExcThread(monitor, started 140011219441408)>']
[2025-07-26 22:25:03] 2025-07-27 02:24:59,271 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 22:25:03] 2025-07-27 02:24:59,271 | INFO     | [monitor] control thread has ended
[2025-07-26 22:25:03] 2025-07-27 02:25:03,499 | INFO     | all workflow threads have been joined
[2025-07-26 22:25:03] 2025-07-27 02:25:03,500 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 22:25:03] 2025-07-27 02:25:03,504 | INFO     | traces error code: 0
[2025-07-26 22:25:03] 2025-07-27 02:25:03,506 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 22:25:03] 2025-07-27 02:25:03,605 [wrapper] ==== pilot stdout END ====
[2025-07-26 22:25:03] 2025-07-27 02:25:03,609 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 22:25:03] 2025-07-27 02:25:03,612 [wrapper] pilotpid: 24590
[2025-07-26 22:25:03] 2025-07-27 02:25:03,616 [wrapper] Pilot exit status: 0
[2025-07-26 22:25:03] 2025-07-27 02:25:03,632 [wrapper] pandaids: 6745388484
[2025-07-26 22:25:03] 2025-07-27 02:25:03,674 [wrapper] cleanup supervisor_pilot 13151 24591
[2025-07-26 22:25:03] 2025-07-27 02:25:03,678 [wrapper] Test setup, not cleaning
[2025-07-26 22:25:03] 2025-07-27 02:25:03,682 [wrapper] apfmon messages muted
[2025-07-26 22:25:03] 2025-07-27 02:25:03,686 [wrapper] ==== wrapper stdout END ====
[2025-07-26 22:25:03] 2025-07-27 02:25:03,690 [wrapper] ==== wrapper stderr END ====
[2025-07-26 22:25:03]  *** Error codes and diagnostics ***
[2025-07-26 22:25:03]     "exeErrorCode": 0,
[2025-07-26 22:25:03]     "exeErrorDiag": "",
[2025-07-26 22:25:03]     "pilotErrorCode": 0,
[2025-07-26 22:25:03]     "pilotErrorDiag": "",
[2025-07-26 22:25:03]  *** Listing of results directory ***
[2025-07-26 22:25:03] total 359824
[2025-07-26 22:25:03] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 15:43 pilot3.tar.gz
[2025-07-26 22:25:03] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 16:01 queuedata.json
[2025-07-26 22:25:03] -rwx------ 1 boincer umatlas     36292 Jul 26 16:02 runpilot2-wrapper.sh
[2025-07-26 22:25:03] -rw-r--r-- 1 boincer umatlas       100 Jul 26 20:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 22:25:03] -rwxr-xr-x 1 boincer umatlas      7986 Jul 26 20:59 run_atlas
[2025-07-26 22:25:03] -rw-r--r-- 1 boincer umatlas       105 Jul 26 20:59 job.xml
[2025-07-26 22:25:03] -rw-r--r-- 2 boincer umatlas 148520761 Jul 26 20:59 EVNT.45743347._002487.pool.root.1
[2025-07-26 22:25:03] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 20:59 start_atlas.sh
[2025-07-26 22:25:03] drwxrwx--x 2 boincer umatlas      4096 Jul 26 20:59 shared
[2025-07-26 22:25:03] -rw-r--r-- 2 boincer umatlas    542902 Jul 26 20:59 input.tar.gz
[2025-07-26 22:25:03] -rw-r--r-- 1 boincer umatlas         0 Jul 26 20:59 boinc_lockfile
[2025-07-26 22:25:03] -rw-r--r-- 1 boincer umatlas      2563 Jul 26 20:59 pandaJob.out
[2025-07-26 22:25:03] -rw------- 1 boincer umatlas    980117 Jul 26 20:59 agis_schedconf.cvmfs.json
[2025-07-26 22:25:03] -rw------- 1 boincer umatlas   1593052 Jul 26 20:59 agis_ddmendpoints.agis.ALL.json
[2025-07-26 22:25:03] drwx------ 4 boincer umatlas      4096 Jul 26 20:59 pilot3
[2025-07-26 22:25:03] -rw-r--r-- 1 boincer umatlas      5868 Jul 26 22:21 init_data.xml
[2025-07-26 22:25:03] -rw------- 1 boincer umatlas 214380673 Jul 26 22:24 HITS.45743349._043533.pool.root.1
[2025-07-26 22:25:03] -rw------- 1 boincer umatlas        95 Jul 26 22:24 pilot_heartbeat.json
[2025-07-26 22:25:03] -rw-r--r-- 1 boincer umatlas      8192 Jul 26 22:24 boinc_mmap_file
[2025-07-26 22:25:03] -rw-r--r-- 1 boincer umatlas        27 Jul 26 22:24 wrapper_checkpoint.txt
[2025-07-26 22:25:03] -rw-r--r-- 1 boincer umatlas       529 Jul 26 22:24 boinc_task_state.xml
[2025-07-26 22:25:03] -rw------- 1 boincer umatlas      1049 Jul 26 22:24 memory_monitor_summary.json
[2025-07-26 22:25:03] -rw------- 1 boincer umatlas    359537 Jul 26 22:24 log.45743349._043533.job.log.tgz.1
[2025-07-26 22:25:03] -rw------- 1 boincer umatlas      7853 Jul 26 22:24 heartbeat.json
[2025-07-26 22:25:03] -rw------- 1 boincer umatlas      4480 Jul 26 22:25 pilotlog.txt
[2025-07-26 22:25:03] -rw------- 1 boincer umatlas    485374 Jul 26 22:25 log.45743349._043533.job.log.1
[2025-07-26 22:25:03] -rw------- 1 boincer umatlas       357 Jul 26 22:25 output.list
[2025-07-26 22:25:03] -rw-r--r-- 1 boincer umatlas       620 Jul 26 22:25 runtime_log
[2025-07-26 22:25:03] -rw------- 1 boincer umatlas    860160 Jul 26 22:25 result.tar.gz
[2025-07-26 22:25:03] -rw-r--r-- 1 boincer umatlas      8662 Jul 26 22:25 runtime_log.err
[2025-07-26 22:25:03] -rw------- 1 boincer umatlas       659 Jul 26 22:25 9hBNDmuG0z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmYM1KDm0JoIsn.diag
[2025-07-26 22:25:03] -rw-r--r-- 1 boincer umatlas     21762 Jul 26 22:25 stderr.txt
[2025-07-26 22:25:03] HITS file was successfully produced:
[2025-07-26 22:25:03] -rw------- 1 boincer umatlas 214380673 Jul 26 22:24 shared/HITS.pool.root.1
[2025-07-26 22:25:03]  *** Contents of shared directory: ***
[2025-07-26 22:25:03] total 355788
[2025-07-26 22:25:03] -rw-r--r-- 2 boincer umatlas 148520761 Jul 26 20:59 ATLAS.root_0
[2025-07-26 22:25:03] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 20:59 start_atlas.sh
[2025-07-26 22:25:03] -rw-r--r-- 2 boincer umatlas    542902 Jul 26 20:59 input.tar.gz
[2025-07-26 22:25:03] -rw------- 1 boincer umatlas 214380673 Jul 26 22:24 HITS.pool.root.1
[2025-07-26 22:25:03] -rw------- 1 boincer umatlas    860160 Jul 26 22:25 result.tar.gz
22:25:04 (20994): run_atlas exited; CPU time 55886.144864
22:25:04 (20994): called boinc_finish(0)

</stderr_txt>
]]>

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