Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:01:39 (4796): wrapper (7.7.26015): starting
21:01:39 (4796): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 21:01:39] Arguments: --nthreads 12
[2025-07-26 21:01:39] Threads: 12
[2025-07-26 21:01:39] Checking for CVMFS
[2025-07-26 21:01:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 21:01:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 21:01:39] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 21:01:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 21:01:39] 2.11.2.0 2924 111269 95796 148794 2 59 14922922 20275201 1 130560 0 39231463 99.972 10238106 11250 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 21:01:39] CVMFS is ok
[2025-07-26 21:01:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 21:01:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 21:01:39] Further information can be found at the LHC@home message board.
[2025-07-26 21:01:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 21:01:39] Checking for apptainer binary...
[2025-07-26 21:01:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 21:01:39] Running /usr/bin/apptainer --version
[2025-07-26 21:01:39] apptainer version 1.3.2-1.el7
[2025-07-26 21:01:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 21:01:40] c-205-28.aglt2.org
[2025-07-26 21:01:40] apptainer works
[2025-07-26 21:01:40] Set ATHENA_PROC_NUMBER=12
[2025-07-26 21:01:40] Set ATHENA_CORE_NUMBER=12
[2025-07-26 21:01:41] Starting ATLAS job with PandaID=6745388496
[2025-07-26 21:01:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 22:21:58]  *** The last 200 lines of the pilot log: ***
[2025-07-26 22:21:58]  is_tar=False
[2025-07-26 22:21:58]  lfn=log.45743349._043545.job.log.tgz.1
[2025-07-26 22:21:58]  mtime=0
[2025-07-26 22:21:58]  protocol_id=None
[2025-07-26 22:21:58]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 22:21:58]  replicas=None
[2025-07-26 22:21:58]  scope=mc23_13p6TeV
[2025-07-26 22:21:58]  status=None
[2025-07-26 22:21:58]  status_code=0
[2025-07-26 22:21:58]  storage_token=
[2025-07-26 22:21:58]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745388496/log.45743349._043545.job.log.tgz.1
[2025-07-26 22:21:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/80/c4/log.45743349._043545.job.log.tgz.1
[2025-07-26 22:21:58]  workdir=None
[2025-07-26 22:21:58] ]
[2025-07-26 22:21:58] 2025-07-27 02:21:18,819 | INFO     | transferring file log.45743349._043545.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745388496/log.45743349._043545.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 22:21:58] 2025-07-27 02:21:18,819 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745388496/log.45743349._043545.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._043545.job
[2025-07-26 22:21:58] 2025-07-27 02:21:18,843 | INFO     | adding to output.list: log.45743349._043545.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/80/c4/log.45743349._043545.job.log.tg
[2025-07-26 22:21:58] 2025-07-27 02:21:18,844 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 22:21:58] 2025-07-27 02:21:18,844 | INFO     | summary of transferred files:
[2025-07-26 22:21:58] 2025-07-27 02:21:18,844 | INFO     |  -- lfn=log.45743349._043545.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 22:21:58] 2025-07-27 02:21:18,844 | INFO     | stage-out finished correctly
[2025-07-26 22:21:58] 2025-07-27 02:21:19,007 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 22:21:58] 2025-07-27 02:21:19,252 | INFO     | monitor loop #357: job 0:6745388496 is in state 'finished'
[2025-07-26 22:21:58] 2025-07-27 02:21:19,252 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 22:21:58] 2025-07-27 02:21:21,648 | INFO     | job 6745388496 has state=finished
[2025-07-26 22:21:58] 2025-07-27 02:21:21,648 | INFO     | preparing for final server update for job 6745388496 in state='finished'
[2025-07-26 22:21:58] 2025-07-27 02:21:21,649 | INFO     | this job has now completed (state=finished)
[2025-07-26 22:21:58] 2025-07-27 02:21:21,649 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 22:21:58] 2025-07-27 02:21:21,649 | INFO     | log transfer has been attempted: DONE
[2025-07-26 22:21:58] 2025-07-27 02:21:21,649 | INFO     | job 6745388496 has finished - writing final server update
[2025-07-26 22:21:58] 2025-07-27 02:21:21,650 | INFO     | total number of processed events: 400 (read)
[2025-07-26 22:21:58] 2025-07-27 02:21:21,651 | INFO     | executing command: lscpu
[2025-07-26 22:21:58] 2025-07-27 02:21:21,675 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 22:21:58] 2025-07-27 02:21:21,755 | INFO     | monitor loop #358: job 0:6745388496 is in state 'finished'
[2025-07-26 22:21:58] 2025-07-27 02:21:21,756 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 22:21:58] 2025-07-27 02:21:24,259 | INFO     | monitor loop #359: job 0:6745388496 is in state 'finished'
[2025-07-26 22:21:58] 2025-07-27 02:21:24,259 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 22:21:58] 2025-07-27 02:21:24,354 | INFO     | PID=8404 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-26 22:21:58] 2025-07-27 02:21:26,688 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-26 22:21:58] 2025-07-27 02:21:26,691 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-07-26 22:21:58] 2025-07-27 02:21:26,694 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745388496/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 22:21:58] 2025-07-27 02:21:26,695 | INFO     | extracted standard info from prmon json
[2025-07-26 22:21:58] 2025-07-27 02:21:26,695 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 22:21:58] 2025-07-27 02:21:26,695 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 22:21:58] 2025-07-27 02:21:26,696 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 22:21:58] 2025-07-27 02:21:26,696 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 22:21:58] 2025-07-27 02:21:26,699 | INFO     | fitting pss+swap vs Time
[2025-07-26 22:21:58] 2025-07-27 02:21:26,699 | INFO     | sum of square deviations: 110960220.0
[2025-07-26 22:21:58] 2025-07-27 02:21:26,699 | INFO     | sum of deviations: -2891085727.9999995
[2025-07-26 22:21:58] 2025-07-27 02:21:26,700 | INFO     | mean x: 1753580585.0
[2025-07-26 22:21:58] 2025-07-27 02:21:26,700 | INFO     | mean y: 2708936.7183098593
[2025-07-26 22:21:58] 2025-07-27 02:21:26,700 | INFO     | -- intersect: 45692522837.51438
[2025-07-26 22:21:58] 2025-07-27 02:21:26,700 | INFO     | intersect: 45692522837.51438
[2025-07-26 22:21:58] 2025-07-27 02:21:26,700 | INFO     | chi2: 0.048698492085021174
[2025-07-26 22:21:58] 2025-07-27 02:21:26,701 | INFO     | -- intersect: 45692522837.51438
[2025-07-26 22:21:58] 2025-07-27 02:21:26,701 | INFO     | current memory leak: -26.06 B/s (using 71 data points, chi2=0.05)
[2025-07-26 22:21:58] 2025-07-27 02:21:26,701 | INFO     | could have reported an average CPU frequency of 2039 MHz (6 samples)
[2025-07-26 22:21:58] 2025-07-27 02:21:26,702 | INFO     | ..............................
[2025-07-26 22:21:58] 2025-07-27 02:21:26,702 | INFO     | . Timing measurements:
[2025-07-26 22:21:58] 2025-07-27 02:21:26,702 | INFO     | . get job = 0 s
[2025-07-26 22:21:58] 2025-07-27 02:21:26,702 | INFO     | . initial setup = 2 s
[2025-07-26 22:21:58] 2025-07-27 02:21:26,702 | INFO     | . payload setup = 9 s
[2025-07-26 22:21:58] 2025-07-27 02:21:26,702 | INFO     | . stage-in = 0 s
[2025-07-26 22:21:58] 2025-07-27 02:21:26,702 | INFO     | . payload execution = 4733 s
[2025-07-26 22:21:58] 2025-07-27 02:21:26,703 | INFO     | . stage-out = 0 s
[2025-07-26 22:21:58] 2025-07-27 02:21:26,703 | INFO     | . log creation = 0 s
[2025-07-26 22:21:58] 2025-07-27 02:21:26,703 | INFO     | ..............................
[2025-07-26 22:21:58] 2025-07-27 02:21:26,786 | INFO     | 
[2025-07-26 22:21:58] 2025-07-27 02:21:26,786 | INFO     | job summary report
[2025-07-26 22:21:58] 2025-07-27 02:21:26,786 | INFO     | --------------------------------------------------
[2025-07-26 22:21:58] 2025-07-27 02:21:26,786 | INFO     | PanDA job id: 6745388496
[2025-07-26 22:21:58] 2025-07-27 02:21:26,787 | INFO     | task id: 45743349
[2025-07-26 22:21:58] 2025-07-27 02:21:26,787 | INFO     | errors: (none)
[2025-07-26 22:21:58] 2025-07-27 02:21:26,787 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 22:21:58] 2025-07-27 02:21:26,787 | INFO     | pilot state: finished 
[2025-07-26 22:21:58] 2025-07-27 02:21:26,787 | INFO     | transexitcode: 0
[2025-07-26 22:21:58] 2025-07-27 02:21:26,787 | INFO     | exeerrorcode: 0
[2025-07-26 22:21:58] 2025-07-27 02:21:26,788 | INFO     | exeerrordiag: 
[2025-07-26 22:21:58] 2025-07-27 02:21:26,788 | INFO     | exitcode: 0
[2025-07-26 22:21:58] 2025-07-27 02:21:26,788 | INFO     | exitmsg: OK
[2025-07-26 22:21:58] 2025-07-27 02:21:26,788 | INFO     | cpuconsumptiontime: 52232 s
[2025-07-26 22:21:58] 2025-07-27 02:21:26,788 | INFO     | nevents: 400
[2025-07-26 22:21:58] 2025-07-27 02:21:26,788 | INFO     | neventsw: 0
[2025-07-26 22:21:58] 2025-07-27 02:21:26,789 | INFO     | pid: 14864
[2025-07-26 22:21:58] 2025-07-27 02:21:26,789 | INFO     | pgrp: 14864
[2025-07-26 22:21:58] 2025-07-27 02:21:26,789 | INFO     | corecount: 12
[2025-07-26 22:21:58] 2025-07-27 02:21:26,789 | INFO     | event service: False
[2025-07-26 22:21:58] 2025-07-27 02:21:26,789 | INFO     | sizes: {0: 2397242, 1: 2397497, 6: 2397759, 12: 2397787, 4747: 2424010, 4749: 2433192, 4757: 2433330}
[2025-07-26 22:21:58] 2025-07-27 02:21:26,789 | INFO     | --------------------------------------------------
[2025-07-26 22:21:58] 2025-07-27 02:21:26,790 | INFO     | 
[2025-07-26 22:21:58] 2025-07-27 02:21:26,790 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 22:21:58] 2025-07-27 02:21:26,815 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 22:21:58] 2025-07-27 02:21:26,815 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 22:21:58] 2025-07-27 02:21:26,815 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 22:21:58] 2025-07-27 02:21:26,815 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 22:21:58] 2025-07-27 02:21:26,816 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 22:21:58] 2025-07-27 02:21:26,816 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 22:21:58] 2025-07-27 02:21:26,816 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 22:21:58] 2025-07-27 02:21:26,816 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 22:21:58] 2025-07-27 02:21:26,816 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 22:21:58] 2025-07-27 02:21:26,816 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 22:21:58] 2025-07-27 02:21:26,817 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 22:21:58] 2025-07-27 02:21:26,817 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 22:21:58] 2025-07-27 02:21:26,817 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 22:21:58] 2025-07-27 02:21:26,817 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 22:21:58] 2025-07-27 02:21:26,817 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 22:21:58] 2025-07-27 02:21:26,817 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 22:21:58] 2025-07-27 02:21:26,818 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 22:21:58] 2025-07-27 02:21:26,818 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 22:21:58] 2025-07-27 02:21:26,818 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 22:21:58] 2025-07-27 02:21:26,818 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 22:21:58] 2025-07-27 02:21:26,818 | INFO     | job 6745388496 has completed (purged errors)
[2025-07-26 22:21:58] 2025-07-27 02:21:26,819 | INFO     | overall cleanup function is called
[2025-07-26 22:21:58] 2025-07-27 02:21:27,827 | INFO     | --- collectZombieJob: --- 10, [14864]
[2025-07-26 22:21:58] 2025-07-27 02:21:27,827 | INFO     | zombie collector waiting for pid 14864
[2025-07-26 22:21:58] 2025-07-27 02:21:27,827 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 22:21:58] 2025-07-27 02:21:27,827 | INFO     | collected zombie processes
[2025-07-26 22:21:58] 2025-07-27 02:21:27,828 | INFO     | will attempt to kill all subprocesses of pid=14864
[2025-07-26 22:21:58] 2025-07-27 02:21:27,917 | INFO     | process IDs to be killed: [14864] (in reverse order)
[2025-07-26 22:21:58] 2025-07-27 02:21:27,968 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 22:21:58] 2025-07-27 02:21:27,969 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 22:21:58] 2025-07-27 02:21:27,973 | INFO     | did not find any defunct processes belonging to 14864
[2025-07-26 22:21:58] 2025-07-27 02:21:27,976 | INFO     | did not find any defunct processes belonging to 14864
[2025-07-26 22:21:58] 2025-07-27 02:21:27,976 | INFO     | ready for new job
[2025-07-26 22:21:58] 2025-07-27 02:21:27,976 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 22:21:58] 2025-07-27 02:21:27,977 | INFO     | ***************************************
[2025-07-26 22:21:58] 2025-07-27 02:21:27,977 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 22:21:58] 2025-07-27 02:21:27,977 | INFO     | ***************************************
[2025-07-26 22:21:58] 2025-07-27 02:21:27,977 | INFO     | 
[2025-07-26 22:21:58] 2025-07-27 02:21:27,978 | INFO     | architecture information:
[2025-07-26 22:21:58] 2025-07-27 02:21:27,979 | INFO     | executing command: cat /etc/os-release
[2025-07-26 22:21:58] 2025-07-27 02:21:27,993 | INFO     | cat /etc/os-release:
[2025-07-26 22:21:58] NAME="CentOS Linux"
[2025-07-26 22:21:58] VERSION="7 (Core)"
[2025-07-26 22:21:58] ID="centos"
[2025-07-26 22:21:58] ID_LIKE="rhel fedora"
[2025-07-26 22:21:58] VERSION_ID="7"
[2025-07-26 22:21:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 22:21:58] ANSI_COLOR="0;31"
[2025-07-26 22:21:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 22:21:58] HOME_URL="https://www.centos.org/"
[2025-07-26 22:21:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 22:21:58] 
[2025-07-26 22:21:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 22:21:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 22:21:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 22:21:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 22:21:58] 
[2025-07-26 22:21:58] 2025-07-27 02:21:27,993 | INFO     | ***************************************
[2025-07-26 22:21:58] 2025-07-27 02:21:28,496 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 22:21:58] 2025-07-27 02:21:28,512 | INFO     | sufficient remaining disk space (29507977216 B)
[2025-07-26 22:21:58] 2025-07-27 02:21:28,512 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 22:21:58] 2025-07-27 02:21:28,513 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 22:21:58] 2025-07-27 02:21:28,513 | INFO     | update_server=False
[2025-07-26 22:21:58] 2025-07-27 02:21:28,513 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 22:21:58] 2025-07-27 02:21:28,513 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 22:21:58] 2025-07-27 02:21:28,514 | INFO     | aborting loop
[2025-07-26 22:21:58] 2025-07-27 02:21:28,514 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 22:21:58] 2025-07-27 02:21:28,724 | INFO     | all payload control threads have been joined
[2025-07-26 22:21:58] 2025-07-27 02:21:29,031 | INFO     | all data control threads have been joined
[2025-07-26 22:21:58] 2025-07-27 02:21:29,443 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 22:21:58] 2025-07-27 02:21:29,519 | INFO     | [job] retrieve thread has finished
[2025-07-26 22:21:58] 2025-07-27 02:21:29,519 | INFO     | [job] job monitor thread has finished
[2025-07-26 22:21:58] 2025-07-27 02:21:29,520 | INFO     | [job] queue monitor thread has finished
[2025-07-26 22:21:58] 2025-07-27 02:21:29,598 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 22:21:58] 2025-07-27 02:21:29,729 | INFO     | [payload] control thread has finished
[2025-07-26 22:21:58] 2025-07-27 02:21:29,776 | INFO     | [job] validate thread has finished
[2025-07-26 22:21:58] 2025-07-27 02:21:29,979 | INFO     | all job control threads have been joined
[2025-07-26 22:21:58] 2025-07-27 02:21:30,028 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 22:21:58] 2025-07-27 02:21:30,036 | INFO     | [data] control thread has finished
[2025-07-26 22:21:58] 2025-07-27 02:21:30,072 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 22:21:58] 2025-07-27 02:21:30,334 | INFO     | [payload] failed_post thread has finished
[2025-07-26 22:21:58] 2025-07-27 02:21:30,365 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 22:21:58] 2025-07-27 02:21:30,658 | INFO     | [data] copytool_in thread has finished
[2025-07-26 22:21:58] 2025-07-27 02:21:30,933 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 22:21:58] 2025-07-27 02:21:30,958 | INFO     | [payload] validate_post thread has finished
[2025-07-26 22:21:58] 2025-07-27 02:21:30,984 | INFO     | [job] control thread has finished
[2025-07-26 22:21:58] 2025-07-27 02:21:31,448 | INFO     | [data] copytool_out thread has finished
[2025-07-26 22:21:58] 2025-07-27 02:21:33,602 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 22:21:58] 2025-07-27 02:21:34,975 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140411417110336)>', '<ExcThread(monitor, started 140410861119232)>']
[2025-07-26 22:21:58] 2025-07-27 02:21:40,000 | INFO     | all workflow threads have been joined
[2025-07-26 22:21:58] 2025-07-27 02:21:40,000 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 22:21:58] 2025-07-27 02:21:40,001 | INFO     | traces error code: 0
[2025-07-26 22:21:58] 2025-07-27 02:21:40,001 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 22:21:58] 2025-07-27 02:21:58,543 | INFO     | PID=8404 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-26 22:21:58] 2025-07-27 02:21:58,544 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 22:21:58] 2025-07-27 02:21:58,544 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 22:21:58] 2025-07-27 02:21:58,544 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 22:21:58] 2025-07-27 02:21:58,544 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 22:21:58] 2025-07-27 02:21:58,544 | INFO     | [monitor] control thread has ended
[2025-07-26 22:21:58] 2025-07-27 02:21:58,633 [wrapper] ==== pilot stdout END ====
[2025-07-26 22:21:58] 2025-07-27 02:21:58,637 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 22:21:58] 2025-07-27 02:21:58,640 [wrapper] pilotpid: 8404
[2025-07-26 22:21:58] 2025-07-27 02:21:58,644 [wrapper] Pilot exit status: 0
[2025-07-26 22:21:58] 2025-07-27 02:21:58,660 [wrapper] pandaids: 6745388496
[2025-07-26 22:21:58] 2025-07-27 02:21:58,701 [wrapper] cleanup supervisor_pilot 32416 8405
[2025-07-26 22:21:58] 2025-07-27 02:21:58,705 [wrapper] Test setup, not cleaning
[2025-07-26 22:21:58] 2025-07-27 02:21:58,709 [wrapper] apfmon messages muted
[2025-07-26 22:21:58] 2025-07-27 02:21:58,713 [wrapper] ==== wrapper stdout END ====
[2025-07-26 22:21:58] 2025-07-27 02:21:58,717 [wrapper] ==== wrapper stderr END ====
[2025-07-26 22:21:58]  *** Error codes and diagnostics ***
[2025-07-26 22:21:58]     "exeErrorCode": 0,
[2025-07-26 22:21:58]     "exeErrorDiag": "",
[2025-07-26 22:21:58]     "pilotErrorCode": 0,
[2025-07-26 22:21:58]     "pilotErrorDiag": "",
[2025-07-26 22:21:58]  *** Listing of results directory ***
[2025-07-26 22:21:58] total 355840
[2025-07-26 22:21:58] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 15:43 pilot3.tar.gz
[2025-07-26 22:21:58] -rwx------ 1 boincer umatlas     36292 Jul 26 16:04 runpilot2-wrapper.sh
[2025-07-26 22:21:58] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 16:04 queuedata.json
[2025-07-26 22:21:58] -rw-r--r-- 1 boincer umatlas       100 Jul 26 21:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 22:21:58] -rwxr-xr-x 1 boincer umatlas      7986 Jul 26 21:01 run_atlas
[2025-07-26 22:21:58] -rw-r--r-- 1 boincer umatlas       105 Jul 26 21:01 job.xml
[2025-07-26 22:21:58] -rw-r--r-- 2 boincer umatlas 151429245 Jul 26 21:01 EVNT.45743347._002488.pool.root.1
[2025-07-26 22:21:58] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 21:01 start_atlas.sh
[2025-07-26 22:21:58] drwxrwx--x 2 boincer umatlas      4096 Jul 26 21:01 shared
[2025-07-26 22:21:58] -rw-r--r-- 2 boincer umatlas    542887 Jul 26 21:01 input.tar.gz
[2025-07-26 22:21:58] -rw-r--r-- 1 boincer umatlas         0 Jul 26 21:01 boinc_lockfile
[2025-07-26 22:21:58] -rw-r--r-- 1 boincer umatlas      2560 Jul 26 21:01 pandaJob.out
[2025-07-26 22:21:58] -rw------- 1 boincer umatlas    980117 Jul 26 21:01 agis_schedconf.cvmfs.json
[2025-07-26 22:21:58] -rw------- 1 boincer umatlas   1593052 Jul 26 21:01 agis_ddmendpoints.agis.ALL.json
[2025-07-26 22:21:58] drwx------ 4 boincer umatlas      4096 Jul 26 21:01 pilot3
[2025-07-26 22:21:58] -rw------- 1 boincer umatlas 207457205 Jul 26 22:20 HITS.45743349._043545.pool.root.1
[2025-07-26 22:21:58] -rw-r--r-- 1 boincer umatlas       529 Jul 26 22:21 boinc_task_state.xml
[2025-07-26 22:21:58] -rw-r--r-- 1 boincer umatlas      5868 Jul 26 22:21 init_data.xml
[2025-07-26 22:21:58] -rw------- 1 boincer umatlas      1049 Jul 26 22:21 memory_monitor_summary.json
[2025-07-26 22:21:58] -rw------- 1 boincer umatlas    349800 Jul 26 22:21 log.45743349._043545.job.log.tgz.1
[2025-07-26 22:21:58] -rw------- 1 boincer umatlas      7848 Jul 26 22:21 heartbeat.json
[2025-07-26 22:21:58] -rw-r--r-- 1 boincer umatlas        27 Jul 26 22:21 wrapper_checkpoint.txt
[2025-07-26 22:21:58] -rw-r--r-- 1 boincer umatlas      8192 Jul 26 22:21 boinc_mmap_file
[2025-07-26 22:21:58] -rw------- 1 boincer umatlas        95 Jul 26 22:21 pilot_heartbeat.json
[2025-07-26 22:21:58] -rw------- 1 boincer umatlas       744 Jul 26 22:21 pilotlog.txt
[2025-07-26 22:21:58] -rw------- 1 boincer umatlas    456792 Jul 26 22:21 log.45743349._043545.job.log.1
[2025-07-26 22:21:58] -rw------- 1 boincer umatlas       357 Jul 26 22:21 output.list
[2025-07-26 22:21:58] -rw-r--r-- 1 boincer umatlas       620 Jul 26 22:21 runtime_log
[2025-07-26 22:21:58] -rw------- 1 boincer umatlas    829440 Jul 26 22:21 result.tar.gz
[2025-07-26 22:21:58] -rw-r--r-- 1 boincer umatlas      8662 Jul 26 22:21 runtime_log.err
[2025-07-26 22:21:58] -rw------- 1 boincer umatlas       659 Jul 26 22:21 CSJLDmsI0z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmnM1KDmXeqiNm.diag
[2025-07-26 22:21:58] -rw-r--r-- 1 boincer umatlas     21689 Jul 26 22:21 stderr.txt
[2025-07-26 22:21:58] HITS file was successfully produced:
[2025-07-26 22:21:58] -rw------- 1 boincer umatlas 207457205 Jul 26 22:20 shared/HITS.pool.root.1
[2025-07-26 22:21:58]  *** Contents of shared directory: ***
[2025-07-26 22:21:58] total 351844
[2025-07-26 22:21:58] -rw-r--r-- 2 boincer umatlas 151429245 Jul 26 21:01 ATLAS.root_0
[2025-07-26 22:21:58] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 21:01 start_atlas.sh
[2025-07-26 22:21:58] -rw-r--r-- 2 boincer umatlas    542887 Jul 26 21:01 input.tar.gz
[2025-07-26 22:21:58] -rw------- 1 boincer umatlas 207457205 Jul 26 22:20 HITS.pool.root.1
[2025-07-26 22:21:58] -rw------- 1 boincer umatlas    829440 Jul 26 22:21 result.tar.gz
22:22:00 (4796): run_atlas exited; CPU time 52203.663273
22:22:00 (4796): called boinc_finish(0)

</stderr_txt>
]]>

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