Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:46:05 (769701): wrapper (7.7.26015): starting
20:46:05 (769701): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 20:46:05] Arguments: --nthreads 8
[2025-07-26 20:46:05] Threads: 8
[2025-07-26 20:46:05] Checking for CVMFS
[2025-07-26 20:46:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 20:46:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 20:46:05] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 20:46:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 20:46:05] 2.13.1.0 5097 13275 192596 148794 2 196 24178462 40960001 9363 16776704 0 34083078 99.924 17622780 43576 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 20:46:05] CVMFS is ok
[2025-07-26 20:46:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 20:46:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 20:46:05] Further information can be found at the LHC@home message board.
[2025-07-26 20:46:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 20:46:05] Checking for apptainer binary...
[2025-07-26 20:46:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 20:46:05] Running /usr/bin/apptainer --version
[2025-07-26 20:46:05] apptainer version 1.4.1-1.el9
[2025-07-26 20:46:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 20:46:05] c-212-6.aglt2.org
[2025-07-26 20:46:05] apptainer works
[2025-07-26 20:46:05] Set ATHENA_PROC_NUMBER=8
[2025-07-26 20:46:05] Set ATHENA_CORE_NUMBER=8
[2025-07-26 20:46:05] Starting ATLAS job with PandaID=6745229205
[2025-07-26 20:46:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 22:12:37]  *** The last 200 lines of the pilot log: ***
[2025-07-26 22:12:37]  scope=mc23_13p6TeV
[2025-07-26 22:12:37]  status=None
[2025-07-26 22:12:37]  status_code=0
[2025-07-26 22:12:37]  storage_token=
[2025-07-26 22:12:37]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745229205/log.45743349._039276.job.log.tgz.1
[2025-07-26 22:12:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e3/83/log.45743349._039276.job.log.tgz.1
[2025-07-26 22:12:37]  workdir=None
[2025-07-26 22:12:37] ]
[2025-07-26 22:12:37] 2025-07-27 02:11:51,399 | INFO     | transferring file log.45743349._039276.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745229205/log.45743349._039276.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 22:12:37] 2025-07-27 02:11:51,400 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745229205/log.45743349._039276.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._039276.job
[2025-07-26 22:12:37] 2025-07-27 02:11:51,427 | INFO     | adding to output.list: log.45743349._039276.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e3/83/log.45743349._039276.job.log.tg
[2025-07-26 22:12:37] 2025-07-27 02:11:51,428 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 22:12:37] 2025-07-27 02:11:51,428 | INFO     | summary of transferred files:
[2025-07-26 22:12:37] 2025-07-27 02:11:51,428 | INFO     |  -- lfn=log.45743349._039276.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 22:12:37] 2025-07-27 02:11:51,428 | INFO     | stage-out finished correctly
[2025-07-26 22:12:37] 2025-07-27 02:11:53,129 | WARNING  | process 790486 can no longer be monitored (due to stat problems) - aborting
[2025-07-26 22:12:37] 2025-07-27 02:11:53,130 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745229205/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 22:12:37] 2025-07-27 02:11:53,484 | INFO     | number of running child processes to parent process 790486: 1
[2025-07-26 22:12:37] 2025-07-27 02:11:53,484 | INFO     | maximum number of monitored processes: 6
[2025-07-26 22:12:37] 2025-07-27 02:11:54,748 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 22:12:37] 2025-07-27 02:11:55,988 | INFO     | monitor loop #376: job 0:6745229205 is in state 'finished'
[2025-07-26 22:12:37] 2025-07-27 02:11:55,988 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 22:12:37] 2025-07-27 02:11:56,839 | INFO     | job 6745229205 has state=finished
[2025-07-26 22:12:37] 2025-07-27 02:11:56,840 | INFO     | preparing for final server update for job 6745229205 in state='finished'
[2025-07-26 22:12:37] 2025-07-27 02:11:56,841 | INFO     | this job has now completed (state=finished)
[2025-07-26 22:12:37] 2025-07-27 02:11:56,841 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 22:12:37] 2025-07-27 02:11:56,841 | INFO     | log transfer has been attempted: DONE
[2025-07-26 22:12:37] 2025-07-27 02:11:56,841 | INFO     | job 6745229205 has finished - writing final server update
[2025-07-26 22:12:37] 2025-07-27 02:11:56,842 | INFO     | total number of processed events: 400 (read)
[2025-07-26 22:12:37] 2025-07-27 02:11:56,844 | INFO     | executing command: lscpu
[2025-07-26 22:12:37] 2025-07-27 02:11:56,916 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 22:12:37] 2025-07-27 02:11:58,491 | INFO     | monitor loop #377: job 0:6745229205 is in state 'finished'
[2025-07-26 22:12:37] 2025-07-27 02:11:58,492 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 22:12:37] 2025-07-27 02:12:00,994 | INFO     | monitor loop #378: job 0:6745229205 is in state 'finished'
[2025-07-26 22:12:37] 2025-07-27 02:12:00,994 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 22:12:37] 2025-07-27 02:12:02,251 | INFO     | PID=776213 has CPU usage=11.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 22:12:37] 2025-07-27 02:12:02,252 | INFO     | .. there are 18 such processes running
[2025-07-26 22:12:37] 2025-07-27 02:12:02,978 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 22:12:37] 2025-07-27 02:12:02,986 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3295.831395833333
[2025-07-26 22:12:37] 2025-07-27 02:12:03,005 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745229205/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 22:12:37] 2025-07-27 02:12:03,007 | INFO     | extracted standard info from prmon json
[2025-07-26 22:12:37] 2025-07-27 02:12:03,007 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 22:12:37] 2025-07-27 02:12:03,007 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 22:12:37] 2025-07-27 02:12:03,008 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 22:12:37] 2025-07-27 02:12:03,008 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 22:12:37] 2025-07-27 02:12:03,009 | INFO     | fitting pss+swap vs Time
[2025-07-26 22:12:37] 2025-07-27 02:12:03,010 | INFO     | sum of square deviations: 141539398.0
[2025-07-26 22:12:37] 2025-07-27 02:12:03,010 | INFO     | sum of deviations: 788113412.0000001
[2025-07-26 22:12:37] 2025-07-27 02:12:03,010 | INFO     | mean x: 1753579829.0
[2025-07-26 22:12:37] 2025-07-27 02:12:03,010 | INFO     | mean y: 2511697.103896104
[2025-07-26 22:12:37] 2025-07-27 02:12:03,010 | INFO     | -- intersect: -9761693900.602312
[2025-07-26 22:12:37] 2025-07-27 02:12:03,010 | INFO     | intersect: -9761693900.602312
[2025-07-26 22:12:37] 2025-07-27 02:12:03,011 | INFO     | chi2: 0.020697842941187383
[2025-07-26 22:12:37] 2025-07-27 02:12:03,011 | INFO     | -- intersect: -9761693900.602312
[2025-07-26 22:12:37] 2025-07-27 02:12:03,011 | INFO     | current memory leak: 5.57 B/s (using 77 data points, chi2=0.02)
[2025-07-26 22:12:37] 2025-07-27 02:12:03,011 | INFO     | could have reported an average CPU frequency of 3262 MHz (6 samples)
[2025-07-26 22:12:37] 2025-07-27 02:12:03,011 | INFO     | ..............................
[2025-07-26 22:12:37] 2025-07-27 02:12:03,011 | INFO     | . Timing measurements:
[2025-07-26 22:12:37] 2025-07-27 02:12:03,012 | INFO     | . get job = 0 s
[2025-07-26 22:12:37] 2025-07-27 02:12:03,012 | INFO     | . initial setup = 2 s
[2025-07-26 22:12:37] 2025-07-27 02:12:03,012 | INFO     | . payload setup = 8 s
[2025-07-26 22:12:37] 2025-07-27 02:12:03,012 | INFO     | . stage-in = 0 s
[2025-07-26 22:12:37] 2025-07-27 02:12:03,012 | INFO     | . payload execution = 5105 s
[2025-07-26 22:12:37] 2025-07-27 02:12:03,012 | INFO     | . stage-out = 0 s
[2025-07-26 22:12:37] 2025-07-27 02:12:03,012 | INFO     | . log creation = 0 s
[2025-07-26 22:12:37] 2025-07-27 02:12:03,012 | INFO     | ..............................
[2025-07-26 22:12:37] 2025-07-27 02:12:03,214 | INFO     | 
[2025-07-26 22:12:37] 2025-07-27 02:12:03,214 | INFO     | job summary report
[2025-07-26 22:12:37] 2025-07-27 02:12:03,216 | INFO     | --------------------------------------------------
[2025-07-26 22:12:37] 2025-07-27 02:12:03,216 | INFO     | PanDA job id: 6745229205
[2025-07-26 22:12:37] 2025-07-27 02:12:03,216 | INFO     | task id: 45743349
[2025-07-26 22:12:37] 2025-07-27 02:12:03,216 | INFO     | errors: (none)
[2025-07-26 22:12:37] 2025-07-27 02:12:03,217 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 22:12:37] 2025-07-27 02:12:03,217 | INFO     | pilot state: finished 
[2025-07-26 22:12:37] 2025-07-27 02:12:03,217 | INFO     | transexitcode: 0
[2025-07-26 22:12:37] 2025-07-27 02:12:03,217 | INFO     | exeerrorcode: 0
[2025-07-26 22:12:37] 2025-07-27 02:12:03,217 | INFO     | exeerrordiag: 
[2025-07-26 22:12:37] 2025-07-27 02:12:03,217 | INFO     | exitcode: 0
[2025-07-26 22:12:37] 2025-07-27 02:12:03,217 | INFO     | exitmsg: OK
[2025-07-26 22:12:37] 2025-07-27 02:12:03,217 | INFO     | cpuconsumptiontime: 35262 s
[2025-07-26 22:12:37] 2025-07-27 02:12:03,217 | INFO     | nevents: 400
[2025-07-26 22:12:37] 2025-07-27 02:12:03,217 | INFO     | neventsw: 0
[2025-07-26 22:12:37] 2025-07-27 02:12:03,217 | INFO     | pid: 790486
[2025-07-26 22:12:37] 2025-07-27 02:12:03,217 | INFO     | pgrp: 790486
[2025-07-26 22:12:37] 2025-07-27 02:12:03,217 | INFO     | corecount: 8
[2025-07-26 22:12:37] 2025-07-27 02:12:03,217 | INFO     | event service: False
[2025-07-26 22:12:37] 2025-07-27 02:12:03,218 | INFO     | sizes: {0: 2397303, 1: 2397502, 5: 2397764, 11: 2397820, 5118: 2423965, 5119: 2432963, 5123: 2433147, 5131: 2433341}
[2025-07-26 22:12:37] 2025-07-27 02:12:03,218 | INFO     | --------------------------------------------------
[2025-07-26 22:12:37] 2025-07-27 02:12:03,218 | INFO     | 
[2025-07-26 22:12:37] 2025-07-27 02:12:03,218 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 22:12:37] 2025-07-27 02:12:03,257 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 22:12:37] 2025-07-27 02:12:03,258 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 22:12:37] 2025-07-27 02:12:03,258 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 22:12:37] 2025-07-27 02:12:03,258 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 22:12:37] 2025-07-27 02:12:03,258 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 22:12:37] 2025-07-27 02:12:03,258 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 22:12:37] 2025-07-27 02:12:03,258 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 22:12:37] 2025-07-27 02:12:03,258 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 22:12:37] 2025-07-27 02:12:03,258 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 22:12:37] 2025-07-27 02:12:03,259 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 22:12:37] 2025-07-27 02:12:03,259 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 22:12:37] 2025-07-27 02:12:03,259 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 22:12:37] 2025-07-27 02:12:03,259 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 22:12:37] 2025-07-27 02:12:03,259 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 22:12:37] 2025-07-27 02:12:03,259 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 22:12:37] 2025-07-27 02:12:03,259 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 22:12:37] 2025-07-27 02:12:03,259 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 22:12:37] 2025-07-27 02:12:03,259 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 22:12:37] 2025-07-27 02:12:03,259 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 22:12:37] 2025-07-27 02:12:03,259 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 22:12:37] 2025-07-27 02:12:03,260 | INFO     | job 6745229205 has completed (purged errors)
[2025-07-26 22:12:37] 2025-07-27 02:12:03,260 | INFO     | overall cleanup function is called
[2025-07-26 22:12:37] 2025-07-27 02:12:04,269 | INFO     | --- collectZombieJob: --- 10, [790486]
[2025-07-26 22:12:37] 2025-07-27 02:12:04,272 | INFO     | zombie collector waiting for pid 790486
[2025-07-26 22:12:37] 2025-07-27 02:12:04,272 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 22:12:37] 2025-07-27 02:12:04,272 | INFO     | collected zombie processes
[2025-07-26 22:12:37] 2025-07-27 02:12:04,272 | INFO     | will attempt to kill all subprocesses of pid=790486
[2025-07-26 22:12:37] 2025-07-27 02:12:04,683 | INFO     | process IDs to be killed: [790486] (in reverse order)
[2025-07-26 22:12:37] 2025-07-27 02:12:04,818 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 22:12:37] 2025-07-27 02:12:04,819 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 22:12:37] 2025-07-27 02:12:04,835 | INFO     | did not find any defunct processes belonging to 790486
[2025-07-26 22:12:37] 2025-07-27 02:12:04,847 | INFO     | did not find any defunct processes belonging to 790486
[2025-07-26 22:12:37] 2025-07-27 02:12:04,847 | INFO     | ready for new job
[2025-07-26 22:12:37] 2025-07-27 02:12:04,847 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 22:12:37] 2025-07-27 02:12:04,849 | INFO     | ***************************************
[2025-07-26 22:12:37] 2025-07-27 02:12:04,849 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 22:12:37] 2025-07-27 02:12:04,849 | INFO     | ***************************************
[2025-07-26 22:12:37] 2025-07-27 02:12:04,849 | INFO     | 
[2025-07-26 22:12:37] 2025-07-27 02:12:04,854 | INFO     | architecture information:
[2025-07-26 22:12:37] 2025-07-27 02:12:04,854 | INFO     | executing command: cat /etc/os-release
[2025-07-26 22:12:37] 2025-07-27 02:12:04,876 | INFO     | cat /etc/os-release:
[2025-07-26 22:12:37] NAME="CentOS Linux"
[2025-07-26 22:12:37] VERSION="7 (Core)"
[2025-07-26 22:12:37] ID="centos"
[2025-07-26 22:12:37] ID_LIKE="rhel fedora"
[2025-07-26 22:12:37] VERSION_ID="7"
[2025-07-26 22:12:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 22:12:37] ANSI_COLOR="0;31"
[2025-07-26 22:12:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 22:12:37] HOME_URL="https://www.centos.org/"
[2025-07-26 22:12:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 22:12:37] 
[2025-07-26 22:12:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 22:12:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 22:12:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 22:12:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 22:12:37] 
[2025-07-26 22:12:37] 2025-07-27 02:12:04,876 | INFO     | ***************************************
[2025-07-26 22:12:37] 2025-07-27 02:12:05,379 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 22:12:37] 2025-07-27 02:12:05,404 | INFO     | sufficient remaining disk space (124918956032 B)
[2025-07-26 22:12:37] 2025-07-27 02:12:05,405 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 22:12:37] 2025-07-27 02:12:05,405 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 22:12:37] 2025-07-27 02:12:05,405 | INFO     | update_server=False
[2025-07-26 22:12:37] 2025-07-27 02:12:05,405 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 22:12:37] 2025-07-27 02:12:05,405 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 22:12:37] 2025-07-27 02:12:05,406 | INFO     | aborting loop
[2025-07-26 22:12:37] 2025-07-27 02:12:05,406 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 22:12:37] 2025-07-27 02:12:05,407 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 22:12:37] 2025-07-27 02:12:05,864 | INFO     | all job control threads have been joined
[2025-07-26 22:12:37] 2025-07-27 02:12:05,975 | INFO     | all payload control threads have been joined
[2025-07-26 22:12:37] 2025-07-27 02:12:06,150 | INFO     | all data control threads have been joined
[2025-07-26 22:12:37] 2025-07-27 02:12:06,410 | INFO     | [job] retrieve thread has finished
[2025-07-26 22:12:37] 2025-07-27 02:12:06,411 | INFO     | [job] job monitor thread has finished
[2025-07-26 22:12:37] 2025-07-27 02:12:06,654 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 22:12:37] 2025-07-27 02:12:06,744 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 22:12:37] 2025-07-27 02:12:06,775 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 22:12:37] 2025-07-27 02:12:06,870 | INFO     | [job] control thread has finished
[2025-07-26 22:12:37] 2025-07-27 02:12:06,907 | INFO     | [job] validate thread has finished
[2025-07-26 22:12:37] 2025-07-27 02:12:06,916 | INFO     | [payload] failed_post thread has finished
[2025-07-26 22:12:37] 2025-07-27 02:12:06,927 | INFO     | [payload] validate_post thread has finished
[2025-07-26 22:12:37] 2025-07-27 02:12:06,981 | INFO     | [payload] control thread has finished
[2025-07-26 22:12:37] 2025-07-27 02:12:07,156 | INFO     | [data] control thread has finished
[2025-07-26 22:12:37] 2025-07-27 02:12:07,250 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 22:12:37] 2025-07-27 02:12:07,412 | INFO     | [data] copytool_out thread has finished
[2025-07-26 22:12:37] 2025-07-27 02:12:07,484 | INFO     | [data] copytool_in thread has finished
[2025-07-26 22:12:37] 2025-07-27 02:12:08,114 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 22:12:37] 2025-07-27 02:12:09,119 | INFO     | [job] queue monitor thread has finished
[2025-07-26 22:12:37] 2025-07-27 02:12:09,414 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 22:12:37] 2025-07-27 02:12:10,738 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140489788307264)>', '<ExcThread(monitor, started 140489286203136)>']
[2025-07-26 22:12:37] 2025-07-27 02:12:15,764 | INFO     | all workflow threads have been joined
[2025-07-26 22:12:37] 2025-07-27 02:12:15,765 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 22:12:37] 2025-07-27 02:12:15,765 | INFO     | traces error code: 0
[2025-07-26 22:12:37] 2025-07-27 02:12:15,765 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 22:12:37] 2025-07-27 02:12:36,712 | INFO     | PID=776213 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-26 22:12:37] 2025-07-27 02:12:36,712 | INFO     | .. there are 18 such processes running
[2025-07-26 22:12:37] 2025-07-27 02:12:36,713 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 22:12:37] 2025-07-27 02:12:36,713 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 22:12:37] 2025-07-27 02:12:36,714 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 22:12:37] 2025-07-27 02:12:36,714 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 22:12:37] 2025-07-27 02:12:36,714 | INFO     | [monitor] control thread has ended
[2025-07-26 22:12:37] 2025-07-27 02:12:36,904 [wrapper] ==== pilot stdout END ====
[2025-07-26 22:12:37] 2025-07-27 02:12:36,909 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 22:12:37] 2025-07-27 02:12:36,913 [wrapper] pilotpid: 776213
[2025-07-26 22:12:37] 2025-07-27 02:12:36,919 [wrapper] Pilot exit status: 0
[2025-07-26 22:12:37] 2025-07-27 02:12:36,940 [wrapper] pandaids: 6745229205
[2025-07-26 22:12:37] 2025-07-27 02:12:37,031 [wrapper] cleanup supervisor_pilot 1070518 776214
[2025-07-26 22:12:37] 2025-07-27 02:12:37,036 [wrapper] Test setup, not cleaning
[2025-07-26 22:12:37] 2025-07-27 02:12:37,041 [wrapper] apfmon messages muted
[2025-07-26 22:12:37] 2025-07-27 02:12:37,046 [wrapper] ==== wrapper stdout END ====
[2025-07-26 22:12:37] 2025-07-27 02:12:37,050 [wrapper] ==== wrapper stderr END ====
[2025-07-26 22:12:37]  *** Error codes and diagnostics ***
[2025-07-26 22:12:37]     "exeErrorCode": 0,
[2025-07-26 22:12:37]     "exeErrorDiag": "",
[2025-07-26 22:12:37]     "pilotErrorCode": 0,
[2025-07-26 22:12:37]     "pilotErrorDiag": "",
[2025-07-26 22:12:37]  *** Listing of results directory ***
[2025-07-26 22:12:37] total 440744
[2025-07-26 22:12:37] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 10:04 pilot3.tar.gz
[2025-07-26 22:12:37] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 10:20 queuedata.json
[2025-07-26 22:12:37] -rwx------. 1 boincer umatlas     36292 Jul 26 10:20 runpilot2-wrapper.sh
[2025-07-26 22:12:37] -rw-r--r--. 1 boincer umatlas       100 Jul 26 20:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 22:12:37] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 20:46 run_atlas
[2025-07-26 22:12:37] -rw-r--r--. 1 boincer umatlas       105 Jul 26 20:46 job.xml
[2025-07-26 22:12:37] -rw-r--r--. 2 boincer umatlas 230346101 Jul 26 20:46 EVNT.45743347._002243.pool.root.1
[2025-07-26 22:12:37] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 20:46 start_atlas.sh
[2025-07-26 22:12:37] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 20:46 shared
[2025-07-26 22:12:37] -rw-r--r--. 2 boincer umatlas    542892 Jul 26 20:46 input.tar.gz
[2025-07-26 22:12:37] -rw-r--r--. 1 boincer umatlas         0 Jul 26 20:46 boinc_lockfile
[2025-07-26 22:12:37] -rw-r--r--. 1 boincer umatlas      2562 Jul 26 20:46 pandaJob.out
[2025-07-26 22:12:37] -rw-------. 1 boincer umatlas    980117 Jul 26 20:46 agis_schedconf.cvmfs.json
[2025-07-26 22:12:37] -rw-------. 1 boincer umatlas   1593052 Jul 26 20:46 agis_ddmendpoints.agis.ALL.json
[2025-07-26 22:12:37] drwx------. 4 boincer umatlas      4096 Jul 26 20:46 pilot3
[2025-07-26 22:12:37] -rw-r--r--. 1 boincer umatlas      6944 Jul 26 22:10 init_data.xml
[2025-07-26 22:12:37] -rw-------. 1 boincer umatlas 215496454 Jul 26 22:11 HITS.45743349._039276.pool.root.1
[2025-07-26 22:12:37] -rw-r--r--. 1 boincer umatlas       530 Jul 26 22:11 boinc_task_state.xml
[2025-07-26 22:12:37] -rw-------. 1 boincer umatlas      1028 Jul 26 22:11 memory_monitor_summary.json
[2025-07-26 22:12:37] -rw-------. 1 boincer umatlas    303112 Jul 26 22:11 log.45743349._039276.job.log.tgz.1
[2025-07-26 22:12:37] -rw-------. 1 boincer umatlas      7764 Jul 26 22:12 heartbeat.json
[2025-07-26 22:12:37] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 22:12 boinc_mmap_file
[2025-07-26 22:12:37] -rw-r--r--. 1 boincer umatlas        27 Jul 26 22:12 wrapper_checkpoint.txt
[2025-07-26 22:12:37] -rw-------. 1 boincer umatlas        95 Jul 26 22:12 pilot_heartbeat.json
[2025-07-26 22:12:37] -rw-------. 1 boincer umatlas       822 Jul 26 22:12 pilotlog.txt
[2025-07-26 22:12:37] -rw-------. 1 boincer umatlas    497479 Jul 26 22:12 log.45743349._039276.job.log.1
[2025-07-26 22:12:37] -rw-------. 1 boincer umatlas       357 Jul 26 22:12 output.list
[2025-07-26 22:12:37] -rw-r--r--. 1 boincer umatlas       620 Jul 26 22:12 runtime_log
[2025-07-26 22:12:37] -rw-------. 1 boincer umatlas    819200 Jul 26 22:12 result.tar.gz
[2025-07-26 22:12:37] -rw-r--r--. 1 boincer umatlas      8655 Jul 26 22:12 runtime_log.err
[2025-07-26 22:12:37] -rw-------. 1 boincer umatlas       651 Jul 26 22:12 qwQMDmbwuz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmut0KDmPssUvn.diag
[2025-07-26 22:12:37] -rw-r--r--. 1 boincer umatlas     22079 Jul 26 22:12 stderr.txt
[2025-07-26 22:12:37] HITS file was successfully produced:
[2025-07-26 22:12:37] -rw-------. 1 boincer umatlas 215496454 Jul 26 22:11 shared/HITS.pool.root.1
[2025-07-26 22:12:37]  *** Contents of shared directory: ***
[2025-07-26 22:12:37] total 436752
[2025-07-26 22:12:37] -rw-r--r--. 2 boincer umatlas 230346101 Jul 26 20:46 ATLAS.root_0
[2025-07-26 22:12:37] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 20:46 start_atlas.sh
[2025-07-26 22:12:37] -rw-r--r--. 2 boincer umatlas    542892 Jul 26 20:46 input.tar.gz
[2025-07-26 22:12:37] -rw-------. 1 boincer umatlas 215496454 Jul 26 22:11 HITS.pool.root.1
[2025-07-26 22:12:37] -rw-------. 1 boincer umatlas    819200 Jul 26 22:12 result.tar.gz
22:12:38 (769701): run_atlas exited; CPU time 35361.114758
22:12:38 (769701): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN