Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:40:32 (3282730): wrapper (7.7.26015): starting
08:40:32 (3282730): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 08:40:32] Arguments: --nthreads 12
[2025-07-27 08:40:32] Threads: 12
[2025-07-27 08:40:32] Checking for CVMFS
[2025-07-27 08:40:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 08:40:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 08:40:32] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 08:40:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 08:40:32] 2.13.1.0 659355 7778 108956 148803 0 57 2343760 4097024 0 130560 0 6539841 99.991 284138 8132 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-07-27 08:40:32] CVMFS is ok
[2025-07-27 08:40:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 08:40:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 08:40:32] Further information can be found at the LHC@home message board.
[2025-07-27 08:40:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 08:40:32] Checking for apptainer binary...
[2025-07-27 08:40:32] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-07-27 08:40:32] apptainer is not installed, using version from CVMFS
[2025-07-27 08:40:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 08:40:32] pckelar8.cern.ch
[2025-07-27 08:40:32] apptainer works
[2025-07-27 08:40:32] Set ATHENA_PROC_NUMBER=12
[2025-07-27 08:40:32] Set ATHENA_CORE_NUMBER=12
[2025-07-27 08:40:32] Starting ATLAS job with PandaID=6745388432
[2025-07-27 08:40:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 09:56:39]  *** The last 200 lines of the pilot log: ***
[2025-07-27 09:56:39]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-27 09:56:39]  is_altstaged=None
[2025-07-27 09:56:39]  is_tar=False
[2025-07-27 09:56:39]  lfn=log.45743349._043481.job.log.tgz.1
[2025-07-27 09:56:39]  mtime=0
[2025-07-27 09:56:39]  protocol_id=None
[2025-07-27 09:56:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 09:56:39]  replicas=None
[2025-07-27 09:56:39]  scope=mc23_13p6TeV
[2025-07-27 09:56:39]  status=None
[2025-07-27 09:56:39]  status_code=0
[2025-07-27 09:56:39]  storage_token=
[2025-07-27 09:56:39]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6745388432/log.45743349._043481.job.log.tgz.1
[2025-07-27 09:56:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bb/86/log.45743349._043481.job.log.tgz.1
[2025-07-27 09:56:39]  workdir=None
[2025-07-27 09:56:39] ]
[2025-07-27 09:56:39] 2025-07-27 07:56:02,280 | INFO     | transferring file log.45743349._043481.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6745388432/log.45743349._043481.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-27 09:56:39] 2025-07-27 07:56:02,280 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6745388432/log.45743349._043481.job.log.tgz.1 /var/lib/boinc/slots/0/log.45743349._043481.job
[2025-07-27 09:56:39] 2025-07-27 07:56:02,295 | INFO     | adding to output.list: log.45743349._043481.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bb/86/log.45743349._043481.job.log.tg
[2025-07-27 09:56:39] 2025-07-27 07:56:02,296 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 09:56:39] 2025-07-27 07:56:02,296 | INFO     | summary of transferred files:
[2025-07-27 09:56:39] 2025-07-27 07:56:02,296 | INFO     |  -- lfn=log.45743349._043481.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 09:56:39] 2025-07-27 07:56:02,296 | INFO     | stage-out finished correctly
[2025-07-27 09:56:39] 2025-07-27 07:56:02,363 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 09:56:39] 2025-07-27 07:56:03,343 | INFO     | job 6745388432 has state=finished
[2025-07-27 09:56:39] 2025-07-27 07:56:03,343 | INFO     | preparing for final server update for job 6745388432 in state='finished'
[2025-07-27 09:56:39] 2025-07-27 07:56:03,344 | INFO     | this job has now completed (state=finished)
[2025-07-27 09:56:39] 2025-07-27 07:56:03,344 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 09:56:39] 2025-07-27 07:56:03,344 | INFO     | log transfer has been attempted: DONE
[2025-07-27 09:56:39] 2025-07-27 07:56:03,344 | INFO     | job 6745388432 has finished - writing final server update
[2025-07-27 09:56:39] 2025-07-27 07:56:03,344 | INFO     | total number of processed events: 400 (read)
[2025-07-27 09:56:39] 2025-07-27 07:56:03,345 | INFO     | executing command: lscpu
[2025-07-27 09:56:39] 2025-07-27 07:56:03,365 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 09:56:39] 2025-07-27 07:56:05,549 | WARNING  | process 3293511 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 09:56:39] 2025-07-27 07:56:05,549 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6745388432/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 09:56:39] 2025-07-27 07:56:05,619 | INFO     | number of running child processes to parent process 3293511: 1
[2025-07-27 09:56:39] 2025-07-27 07:56:05,619 | INFO     | maximum number of monitored processes: 6
[2025-07-27 09:56:39] 2025-07-27 07:56:07,305 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 09:56:39] 2025-07-27 07:56:07,307 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 2302.6808333333333
[2025-07-27 09:56:39] 2025-07-27 07:56:07,308 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6745388432/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 09:56:39] 2025-07-27 07:56:07,309 | INFO     | extracted standard info from prmon json
[2025-07-27 09:56:39] 2025-07-27 07:56:07,309 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 09:56:39] 2025-07-27 07:56:07,309 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 09:56:39] 2025-07-27 07:56:07,309 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 09:56:39] 2025-07-27 07:56:07,309 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 09:56:39] 2025-07-27 07:56:07,311 | INFO     | fitting pss+swap vs Time
[2025-07-27 09:56:39] 2025-07-27 07:56:07,311 | INFO     | sum of square deviations: 93240818.0
[2025-07-27 09:56:39] 2025-07-27 07:56:07,311 | INFO     | sum of deviations: -12192096474.000002
[2025-07-27 09:56:39] 2025-07-27 07:56:07,311 | INFO     | mean x: 1753600780.0
[2025-07-27 09:56:39] 2025-07-27 07:56:07,312 | INFO     | mean y: 2941317.7910447763
[2025-07-27 09:56:39] 2025-07-27 07:56:07,312 | INFO     | -- intersect: 229302408495.79944
[2025-07-27 09:56:39] 2025-07-27 07:56:07,312 | INFO     | intersect: 229302408495.79944
[2025-07-27 09:56:39] 2025-07-27 07:56:07,312 | INFO     | chi2: 0.09087193682362746
[2025-07-27 09:56:39] 2025-07-27 07:56:07,312 | INFO     | -- intersect: 229302408495.79944
[2025-07-27 09:56:39] 2025-07-27 07:56:07,312 | INFO     | current memory leak: -130.76 B/s (using 67 data points, chi2=0.09)
[2025-07-27 09:56:39] 2025-07-27 07:56:07,312 | INFO     | could have reported an average CPU frequency of 2524 MHz (6 samples)
[2025-07-27 09:56:39] 2025-07-27 07:56:07,313 | INFO     | ..............................
[2025-07-27 09:56:39] 2025-07-27 07:56:07,313 | INFO     | . Timing measurements:
[2025-07-27 09:56:39] 2025-07-27 07:56:07,313 | INFO     | . get job = 0 s
[2025-07-27 09:56:39] 2025-07-27 07:56:07,313 | INFO     | . initial setup = 1 s
[2025-07-27 09:56:39] 2025-07-27 07:56:07,313 | INFO     | . payload setup = 5 s
[2025-07-27 09:56:39] 2025-07-27 07:56:07,313 | INFO     | . stage-in = 0 s
[2025-07-27 09:56:39] 2025-07-27 07:56:07,313 | INFO     | . payload execution = 4499 s
[2025-07-27 09:56:39] 2025-07-27 07:56:07,313 | INFO     | . stage-out = 0 s
[2025-07-27 09:56:39] 2025-07-27 07:56:07,313 | INFO     | . log creation = 0 s
[2025-07-27 09:56:39] 2025-07-27 07:56:07,313 | INFO     | ..............................
[2025-07-27 09:56:39] 2025-07-27 07:56:07,383 | INFO     | 
[2025-07-27 09:56:39] 2025-07-27 07:56:07,383 | INFO     | job summary report
[2025-07-27 09:56:39] 2025-07-27 07:56:07,383 | INFO     | --------------------------------------------------
[2025-07-27 09:56:39] 2025-07-27 07:56:07,383 | INFO     | PanDA job id: 6745388432
[2025-07-27 09:56:39] 2025-07-27 07:56:07,383 | INFO     | task id: 45743349
[2025-07-27 09:56:39] 2025-07-27 07:56:07,383 | INFO     | errors: (none)
[2025-07-27 09:56:39] 2025-07-27 07:56:07,383 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 09:56:39] 2025-07-27 07:56:07,383 | INFO     | pilot state: finished 
[2025-07-27 09:56:39] 2025-07-27 07:56:07,383 | INFO     | transexitcode: 0
[2025-07-27 09:56:39] 2025-07-27 07:56:07,384 | INFO     | exeerrorcode: 0
[2025-07-27 09:56:39] 2025-07-27 07:56:07,384 | INFO     | exeerrordiag: 
[2025-07-27 09:56:39] 2025-07-27 07:56:07,384 | INFO     | exitcode: 0
[2025-07-27 09:56:39] 2025-07-27 07:56:07,384 | INFO     | exitmsg: OK
[2025-07-27 09:56:39] 2025-07-27 07:56:07,384 | INFO     | cpuconsumptiontime: 49425 s
[2025-07-27 09:56:39] 2025-07-27 07:56:07,384 | INFO     | nevents: 400
[2025-07-27 09:56:39] 2025-07-27 07:56:07,384 | INFO     | neventsw: 0
[2025-07-27 09:56:39] 2025-07-27 07:56:07,384 | INFO     | pid: 3293511
[2025-07-27 09:56:39] 2025-07-27 07:56:07,384 | INFO     | pgrp: 3293511
[2025-07-27 09:56:39] 2025-07-27 07:56:07,384 | INFO     | corecount: 12
[2025-07-27 09:56:39] 2025-07-27 07:56:07,384 | INFO     | event service: False
[2025-07-27 09:56:39] 2025-07-27 07:56:07,384 | INFO     | sizes: {0: 2397475, 1: 2397475, 3: 2397765, 11: 2397793, 4508: 2424001, 4509: 2433183, 4514: 2433321}
[2025-07-27 09:56:39] 2025-07-27 07:56:07,384 | INFO     | --------------------------------------------------
[2025-07-27 09:56:39] 2025-07-27 07:56:07,385 | INFO     | 
[2025-07-27 09:56:39] 2025-07-27 07:56:07,385 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-07-27 09:56:39] 2025-07-27 07:56:07,403 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 09:56:39] 2025-07-27 07:56:07,404 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 09:56:39] 2025-07-27 07:56:07,404 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 09:56:39] 2025-07-27 07:56:07,404 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 09:56:39] 2025-07-27 07:56:07,404 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 09:56:39] 2025-07-27 07:56:07,404 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 09:56:39] 2025-07-27 07:56:07,404 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 09:56:39] 2025-07-27 07:56:07,404 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 09:56:39] 2025-07-27 07:56:07,404 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 09:56:39] 2025-07-27 07:56:07,404 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 09:56:39] 2025-07-27 07:56:07,405 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 09:56:39] 2025-07-27 07:56:07,405 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 09:56:39] 2025-07-27 07:56:07,405 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 09:56:39] 2025-07-27 07:56:07,405 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 09:56:39] 2025-07-27 07:56:07,405 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 09:56:39] 2025-07-27 07:56:07,405 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 09:56:39] 2025-07-27 07:56:07,405 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 09:56:39] 2025-07-27 07:56:07,405 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 09:56:39] 2025-07-27 07:56:07,405 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 09:56:39] 2025-07-27 07:56:07,405 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 09:56:39] 2025-07-27 07:56:07,406 | INFO     | job 6745388432 has completed (purged errors)
[2025-07-27 09:56:39] 2025-07-27 07:56:07,406 | INFO     | overall cleanup function is called
[2025-07-27 09:56:39] 2025-07-27 07:56:08,413 | INFO     | --- collectZombieJob: --- 10, [3293511]
[2025-07-27 09:56:39] 2025-07-27 07:56:08,413 | INFO     | zombie collector waiting for pid 3293511
[2025-07-27 09:56:39] 2025-07-27 07:56:08,413 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 09:56:39] 2025-07-27 07:56:08,414 | INFO     | collected zombie processes
[2025-07-27 09:56:39] 2025-07-27 07:56:08,414 | INFO     | will attempt to kill all subprocesses of pid=3293511
[2025-07-27 09:56:39] 2025-07-27 07:56:08,482 | INFO     | process IDs to be killed: [3293511] (in reverse order)
[2025-07-27 09:56:39] 2025-07-27 07:56:08,516 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 09:56:39] 2025-07-27 07:56:08,516 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 09:56:39] 2025-07-27 07:56:08,518 | INFO     | did not find any defunct processes belonging to 3293511
[2025-07-27 09:56:39] 2025-07-27 07:56:08,520 | INFO     | did not find any defunct processes belonging to 3293511
[2025-07-27 09:56:39] 2025-07-27 07:56:08,520 | INFO     | ready for new job
[2025-07-27 09:56:39] 2025-07-27 07:56:08,520 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 09:56:39] 2025-07-27 07:56:08,521 | INFO     | ***************************************
[2025-07-27 09:56:39] 2025-07-27 07:56:08,522 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 09:56:39] 2025-07-27 07:56:08,522 | INFO     | ***************************************
[2025-07-27 09:56:39] 2025-07-27 07:56:08,522 | INFO     | 
[2025-07-27 09:56:39] 2025-07-27 07:56:08,522 | INFO     | architecture information:
[2025-07-27 09:56:39] 2025-07-27 07:56:08,522 | INFO     | executing command: cat /etc/os-release
[2025-07-27 09:56:39] 2025-07-27 07:56:08,534 | INFO     | cat /etc/os-release:
[2025-07-27 09:56:39] NAME="CentOS Linux"
[2025-07-27 09:56:39] VERSION="7 (Core)"
[2025-07-27 09:56:39] ID="centos"
[2025-07-27 09:56:39] ID_LIKE="rhel fedora"
[2025-07-27 09:56:39] VERSION_ID="7"
[2025-07-27 09:56:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 09:56:39] ANSI_COLOR="0;31"
[2025-07-27 09:56:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 09:56:39] HOME_URL="https://www.centos.org/"
[2025-07-27 09:56:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 09:56:39] 
[2025-07-27 09:56:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 09:56:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 09:56:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 09:56:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 09:56:39] 
[2025-07-27 09:56:39] 2025-07-27 07:56:08,534 | INFO     | ***************************************
[2025-07-27 09:56:39] 2025-07-27 07:56:09,036 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-27 09:56:39] 2025-07-27 07:56:09,050 | INFO     | sufficient remaining disk space (1718151544832 B)
[2025-07-27 09:56:39] 2025-07-27 07:56:09,050 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 09:56:39] 2025-07-27 07:56:09,051 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 09:56:39] 2025-07-27 07:56:09,051 | INFO     | update_server=False
[2025-07-27 09:56:39] 2025-07-27 07:56:09,051 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 09:56:39] 2025-07-27 07:56:09,051 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 09:56:39] 2025-07-27 07:56:09,051 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 09:56:39] 2025-07-27 07:56:09,127 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 09:56:39] 2025-07-27 07:56:09,127 | INFO     | aborting loop
[2025-07-27 09:56:39] 2025-07-27 07:56:09,442 | INFO     | all data control threads have been joined
[2025-07-27 09:56:39] 2025-07-27 07:56:09,473 | INFO     | all job control threads have been joined
[2025-07-27 09:56:39] 2025-07-27 07:56:10,056 | INFO     | [job] retrieve thread has finished
[2025-07-27 09:56:39] 2025-07-27 07:56:10,057 | INFO     | [job] queue monitor thread has finished
[2025-07-27 09:56:39] 2025-07-27 07:56:10,073 | INFO     | all payload control threads have been joined
[2025-07-27 09:56:39] 2025-07-27 07:56:10,132 | INFO     | [job] job monitor thread has finished
[2025-07-27 09:56:39] 2025-07-27 07:56:10,142 | INFO     | [payload] failed_post thread has finished
[2025-07-27 09:56:39] 2025-07-27 07:56:10,203 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 09:56:39] 2025-07-27 07:56:10,378 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 09:56:39] 2025-07-27 07:56:10,447 | INFO     | [data] control thread has finished
[2025-07-27 09:56:39] 2025-07-27 07:56:10,479 | INFO     | [job] control thread has finished
[2025-07-27 09:56:39] 2025-07-27 07:56:10,723 | INFO     | [payload] validate_post thread has finished
[2025-07-27 09:56:39] 2025-07-27 07:56:10,841 | INFO     | [job] validate thread has finished
[2025-07-27 09:56:39] 2025-07-27 07:56:10,995 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 09:56:39] 2025-07-27 07:56:11,078 | INFO     | [payload] control thread has finished
[2025-07-27 09:56:39] 2025-07-27 07:56:11,119 | INFO     | [data] copytool_in thread has finished
[2025-07-27 09:56:39] 2025-07-27 07:56:11,331 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 09:56:39] 2025-07-27 07:56:11,557 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 09:56:39] 2025-07-27 07:56:12,384 | INFO     | [data] copytool_out thread has finished
[2025-07-27 09:56:39] 2025-07-27 07:56:13,057 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 09:56:39] 2025-07-27 07:56:13,507 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140340561020736)>', '<ExcThread(monitor, started 140339591505664)>']
[2025-07-27 09:56:39] 2025-07-27 07:56:18,532 | INFO     | all workflow threads have been joined
[2025-07-27 09:56:39] 2025-07-27 07:56:18,533 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 09:56:39] 2025-07-27 07:56:18,533 | INFO     | traces error code: 0
[2025-07-27 09:56:39] 2025-07-27 07:56:18,533 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 09:56:39] 2025-07-27 07:56:39,584 | INFO     | PID=3286403 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 09:56:39] 2025-07-27 07:56:39,585 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 09:56:39] 2025-07-27 07:56:39,585 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 09:56:39] 2025-07-27 07:56:39,585 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 09:56:39] 2025-07-27 07:56:39,585 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 09:56:39] 2025-07-27 07:56:39,585 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 09:56:39] 2025-07-27 07:56:39,586 | INFO     | [monitor] control thread has ended
[2025-07-27 09:56:39] 2025-07-27 07:56:39,668 [wrapper] ==== pilot stdout END ====
[2025-07-27 09:56:39] 2025-07-27 07:56:39,670 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 09:56:39] 2025-07-27 07:56:39,673 [wrapper] pilotpid: 3286403
[2025-07-27 09:56:39] 2025-07-27 07:56:39,676 [wrapper] Pilot exit status: 0
[2025-07-27 09:56:39] 2025-07-27 07:56:39,684 [wrapper] pandaids: 6745388432
[2025-07-27 09:56:39] 2025-07-27 07:56:39,702 [wrapper] cleanup supervisor_pilot 3308132 3286404
[2025-07-27 09:56:39] 2025-07-27 07:56:39,704 [wrapper] Test setup, not cleaning
[2025-07-27 09:56:39] 2025-07-27 07:56:39,706 [wrapper] apfmon messages muted
[2025-07-27 09:56:39] 2025-07-27 07:56:39,708 [wrapper] ==== wrapper stdout END ====
[2025-07-27 09:56:39] 2025-07-27 07:56:39,710 [wrapper] ==== wrapper stderr END ====
[2025-07-27 09:56:39]  *** Error codes and diagnostics ***
[2025-07-27 09:56:39]     "exeErrorCode": 0,
[2025-07-27 09:56:39]     "exeErrorDiag": "",
[2025-07-27 09:56:39]     "pilotErrorCode": 0,
[2025-07-27 09:56:39]     "pilotErrorDiag": "",
[2025-07-27 09:56:39]  *** Listing of results directory ***
[2025-07-27 09:56:39] total 351856
[2025-07-27 09:56:39] -rw-r--r-- 1 boinc boinc    530466 Jul 26 21:43 pilot3.tar.gz
[2025-07-27 09:56:39] -rwx------ 1 boinc boinc     36292 Jul 26 22:01 runpilot2-wrapper.sh
[2025-07-27 09:56:39] -rw-r--r-- 1 boinc boinc      5112 Jul 26 22:01 queuedata.json
[2025-07-27 09:56:39] -rw-r--r-- 1 boinc boinc       100 Jul 27 08:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 09:56:39] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 08:40 run_atlas
[2025-07-27 09:56:39] -rw-r--r-- 1 boinc boinc       105 Jul 27 08:40 job.xml
[2025-07-27 09:56:39] -rw-r--r-- 1 boinc boinc      6251 Jul 27 08:40 init_data.xml
[2025-07-27 09:56:39] -rw-r--r-- 2 boinc boinc 147491299 Jul 27 08:40 EVNT.45743347._002483.pool.root.1
[2025-07-27 09:56:39] -rw-r--r-- 2 boinc boinc     15095 Jul 27 08:40 start_atlas.sh
[2025-07-27 09:56:39] drwxrwx--x 2 boinc boinc      4096 Jul 27 08:40 shared
[2025-07-27 09:56:39] -rw-r--r-- 2 boinc boinc    542892 Jul 27 08:40 input.tar.gz
[2025-07-27 09:56:39] -rw-r--r-- 1 boinc boinc         0 Jul 27 08:40 boinc_lockfile
[2025-07-27 09:56:39] -rw-r--r-- 1 boinc boinc      2563 Jul 27 08:40 pandaJob.out
[2025-07-27 09:56:39] -rw------- 1 boinc boinc    980125 Jul 27 08:40 agis_schedconf.cvmfs.json
[2025-07-27 09:56:39] -rw------- 1 boinc boinc   1593052 Jul 27 08:40 agis_ddmendpoints.agis.ALL.json
[2025-07-27 09:56:39] drwx------ 4 boinc boinc      4096 Jul 27 08:40 pilot3
[2025-07-27 09:56:39] -rw------- 1 boinc boinc 207334804 Jul 27 09:55 HITS.45743349._043481.pool.root.1
[2025-07-27 09:56:39] -rw-r--r-- 1 boinc boinc       529 Jul 27 09:55 boinc_task_state.xml
[2025-07-27 09:56:39] -rw------- 1 boinc boinc      1017 Jul 27 09:55 memory_monitor_summary.json
[2025-07-27 09:56:39] -rw------- 1 boinc boinc    362990 Jul 27 09:56 log.45743349._043481.job.log.tgz.1
[2025-07-27 09:56:39] -rw------- 1 boinc boinc      7791 Jul 27 09:56 heartbeat.json
[2025-07-27 09:56:39] -rw-r--r-- 1 boinc boinc      8192 Jul 27 09:56 boinc_mmap_file
[2025-07-27 09:56:39] -rw-r--r-- 1 boinc boinc        27 Jul 27 09:56 wrapper_checkpoint.txt
[2025-07-27 09:56:39] -rw------- 1 boinc boinc        95 Jul 27 09:56 pilot_heartbeat.json
[2025-07-27 09:56:39] -rw------- 1 boinc boinc       817 Jul 27 09:56 pilotlog.txt
[2025-07-27 09:56:39] -rw------- 1 boinc boinc    442083 Jul 27 09:56 log.45743349._043481.job.log.1
[2025-07-27 09:56:39] -rw------- 1 boinc boinc       357 Jul 27 09:56 output.list
[2025-07-27 09:56:39] -rw-r--r-- 1 boinc boinc       620 Jul 27 09:56 runtime_log
[2025-07-27 09:56:39] -rw------- 1 boinc boinc    819200 Jul 27 09:56 result.tar.gz
[2025-07-27 09:56:39] -rw-r--r-- 1 boinc boinc      8684 Jul 27 09:56 runtime_log.err
[2025-07-27 09:56:39] -rw------- 1 boinc boinc       654 Jul 27 09:56 nMsMDmVG0z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmHM1KDmouofVm.diag
[2025-07-27 09:56:39] -rw-r--r-- 1 boinc boinc     21554 Jul 27 09:56 stderr.txt
[2025-07-27 09:56:39] HITS file was successfully produced:
[2025-07-27 09:56:39] -rw------- 1 boinc boinc 207334804 Jul 27 09:55 shared/HITS.pool.root.1
[2025-07-27 09:56:39]  *** Contents of shared directory: ***
[2025-07-27 09:56:39] total 347864
[2025-07-27 09:56:39] -rw-r--r-- 2 boinc boinc 147491299 Jul 27 08:40 ATLAS.root_0
[2025-07-27 09:56:39] -rw-r--r-- 2 boinc boinc     15095 Jul 27 08:40 start_atlas.sh
[2025-07-27 09:56:39] -rw-r--r-- 2 boinc boinc    542892 Jul 27 08:40 input.tar.gz
[2025-07-27 09:56:39] -rw------- 1 boinc boinc 207334804 Jul 27 09:55 HITS.pool.root.1
[2025-07-27 09:56:39] -rw------- 1 boinc boinc    819200 Jul 27 09:56 result.tar.gz
09:56:40 (3282730): run_atlas exited; CPU time 49442.904053
09:56:40 (3282730): called boinc_finish(0)

</stderr_txt>
]]>

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