Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:31:36 (910788): wrapper (7.7.26015): starting
20:31:36 (910788): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 20:31:36] Arguments: --nthreads 8
[2025-07-26 20:31:36] Threads: 8
[2025-07-26 20:31:36] Checking for CVMFS
[2025-07-26 20:31:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 20:31:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 20:31:36] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 20:31:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 20:31:37] 2.12.6.0 126724 13445 367224 148794 2 346 24301431 32935936 23797 16776704 2 43353710 99.661 70589646 11518 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 20:31:37] CVMFS is ok
[2025-07-26 20:31:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 20:31:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 20:31:37] Further information can be found at the LHC@home message board.
[2025-07-26 20:31:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 20:31:37] Checking for apptainer binary...
[2025-07-26 20:31:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 20:31:37] Running /usr/bin/apptainer --version
[2025-07-26 20:31:37] apptainer version 1.4.1-1.el9
[2025-07-26 20:31:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 20:31:37] c6-12-27-3.aglt2.org
[2025-07-26 20:31:37] apptainer works
[2025-07-26 20:31:37] Set ATHENA_PROC_NUMBER=8
[2025-07-26 20:31:37] Set ATHENA_CORE_NUMBER=8
[2025-07-26 20:31:37] Starting ATLAS job with PandaID=6745263132
[2025-07-26 20:31:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 22:22:49]  *** The last 200 lines of the pilot log: ***
[2025-07-26 22:22:49] 2025-07-27 02:22:16,501 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 22:22:49] 2025-07-27 02:22:16,596 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 22:22:49] 2025-07-27 02:22:16,621 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2624.89
[2025-07-26 22:22:49] 2025-07-27 02:22:16,640 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6745263132/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 22:22:49] 2025-07-27 02:22:16,641 | INFO     | extracted standard info from prmon json
[2025-07-26 22:22:49] 2025-07-27 02:22:16,641 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 22:22:49] 2025-07-27 02:22:16,641 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 22:22:49] 2025-07-27 02:22:16,641 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 22:22:49] 2025-07-27 02:22:16,642 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 22:22:49] 2025-07-27 02:22:16,644 | INFO     | fitting pss+swap vs Time
[2025-07-26 22:22:49] 2025-07-27 02:22:16,645 | INFO     | sum of square deviations: 390582207.0
[2025-07-26 22:22:49] 2025-07-27 02:22:16,645 | INFO     | sum of deviations: 3131882068.999999
[2025-07-26 22:22:49] 2025-07-27 02:22:16,645 | INFO     | mean x: 1753579605.5
[2025-07-26 22:22:49] 2025-07-27 02:22:16,646 | INFO     | mean y: 2142207.777777778
[2025-07-26 22:22:49] 2025-07-27 02:22:16,646 | INFO     | -- intersect: -14058929762.737104
[2025-07-26 22:22:49] 2025-07-27 02:22:16,646 | INFO     | intersect: -14058929762.737104
[2025-07-26 22:22:49] 2025-07-27 02:22:16,646 | INFO     | chi2: 1.7366027137941893
[2025-07-26 22:22:49] 2025-07-27 02:22:16,646 | INFO     | sum of square deviations: 338804492.0
[2025-07-26 22:22:49] 2025-07-27 02:22:16,647 | INFO     | sum of deviations: 4661798790.999999
[2025-07-26 22:22:49] 2025-07-27 02:22:16,647 | INFO     | mean x: 1753579453.0
[2025-07-26 22:22:49] 2025-07-27 02:22:16,647 | INFO     | mean y: 2146670.3786407765
[2025-07-26 22:22:49] 2025-07-27 02:22:16,647 | INFO     | -- intersect: -24126324961.33113
[2025-07-26 22:22:49] 2025-07-27 02:22:16,647 | INFO     | intersect: -24126324961.33113
[2025-07-26 22:22:49] 2025-07-27 02:22:16,647 | INFO     | chi2: 1.7323645397416538
[2025-07-26 22:22:49] 2025-07-27 02:22:16,648 | INFO     | current chi2=1.7323645397416538 (change=0.24404971953981064 %)
[2025-07-26 22:22:49] 2025-07-27 02:22:16,648 | INFO     | right removable region: 102
[2025-07-26 22:22:49] 2025-07-27 02:22:16,648 | INFO     | sum of square deviations: 338804492.0
[2025-07-26 22:22:49] 2025-07-27 02:22:16,649 | INFO     | sum of deviations: -12706315738.000002
[2025-07-26 22:22:49] 2025-07-27 02:22:16,649 | INFO     | mean x: 1753579758.0
[2025-07-26 22:22:49] 2025-07-27 02:22:16,649 | INFO     | mean y: 2188111.368932039
[2025-07-26 22:22:49] 2025-07-27 02:22:16,649 | INFO     | -- intersect: 65767367154.253746
[2025-07-26 22:22:49] 2025-07-27 02:22:16,649 | INFO     | intersect: 65767367154.253746
[2025-07-26 22:22:49] 2025-07-27 02:22:16,649 | INFO     | chi2: 0.10562805218137443
[2025-07-26 22:22:49] 2025-07-27 02:22:16,649 | INFO     | current chi2=0.10562805218137443 (change=93.91754652101201 %)
[2025-07-26 22:22:49] 2025-07-27 02:22:16,649 | INFO     | sum of square deviations: 291817564.5
[2025-07-26 22:22:49] 2025-07-27 02:22:16,650 | INFO     | sum of deviations: -11607685455.5
[2025-07-26 22:22:49] 2025-07-27 02:22:16,650 | INFO     | mean x: 1753579910.5
[2025-07-26 22:22:49] 2025-07-27 02:22:16,650 | INFO     | mean y: 2184529.112244898
[2025-07-26 22:22:49] 2025-07-27 02:22:16,650 | INFO     | -- intersect: 69754682316.70804
[2025-07-26 22:22:49] 2025-07-27 02:22:16,650 | INFO     | intersect: 69754682316.70804
[2025-07-26 22:22:49] 2025-07-27 02:22:16,651 | INFO     | chi2: 0.10255279216525962
[2025-07-26 22:22:49] 2025-07-27 02:22:16,651 | INFO     | current chi2=0.10255279216525962 (change=2.91140464356407 %)
[2025-07-26 22:22:49] 2025-07-27 02:22:16,651 | INFO     | left removable region: 20
[2025-07-26 22:22:49] 2025-07-27 02:22:16,651 | INFO     | sum of square deviations: 170944600.5
[2025-07-26 22:22:49] 2025-07-27 02:22:16,651 | INFO     | sum of deviations: -5979225520.5
[2025-07-26 22:22:49] 2025-07-27 02:22:16,652 | INFO     | mean x: 1753580032.5
[2025-07-26 22:22:49] 2025-07-27 02:22:16,652 | INFO     | mean y: 2176757.3292682925
[2025-07-26 22:22:49] 2025-07-27 02:22:16,652 | INFO     | -- intersect: 61338132686.29832
[2025-07-26 22:22:49] 2025-07-27 02:22:16,652 | INFO     | intersect: 61338132686.29832
[2025-07-26 22:22:49] 2025-07-27 02:22:16,652 | INFO     | chi2: 0.09439960007661095
[2025-07-26 22:22:49] 2025-07-27 02:22:16,652 | INFO     | -- intersect: 61338132686.29832
[2025-07-26 22:22:49] 2025-07-27 02:22:16,652 | INFO     | current memory leak: -34.98 B/s (using 82 data points, chi2=0.09)
[2025-07-26 22:22:49] 2025-07-27 02:22:16,653 | INFO     | could have reported an average CPU frequency of 2660 MHz (7 samples)
[2025-07-26 22:22:49] 2025-07-27 02:22:16,653 | INFO     | ..............................
[2025-07-26 22:22:49] 2025-07-27 02:22:16,653 | INFO     | . Timing measurements:
[2025-07-26 22:22:49] 2025-07-27 02:22:16,653 | INFO     | . get job = 0 s
[2025-07-26 22:22:49] 2025-07-27 02:22:16,653 | INFO     | . initial setup = 2 s
[2025-07-26 22:22:49] 2025-07-27 02:22:16,653 | INFO     | . payload setup = 8 s
[2025-07-26 22:22:49] 2025-07-27 02:22:16,653 | INFO     | . stage-in = 0 s
[2025-07-26 22:22:49] 2025-07-27 02:22:16,653 | INFO     | . payload execution = 6584 s
[2025-07-26 22:22:49] 2025-07-27 02:22:16,653 | INFO     | . stage-out = 0 s
[2025-07-26 22:22:49] 2025-07-27 02:22:16,654 | INFO     | . log creation = 0 s
[2025-07-26 22:22:49] 2025-07-27 02:22:16,654 | INFO     | ..............................
[2025-07-26 22:22:49] 2025-07-27 02:22:16,745 | INFO     | 
[2025-07-26 22:22:49] 2025-07-27 02:22:16,746 | INFO     | job summary report
[2025-07-26 22:22:49] 2025-07-27 02:22:16,746 | INFO     | --------------------------------------------------
[2025-07-26 22:22:49] 2025-07-27 02:22:16,746 | INFO     | PanDA job id: 6745263132
[2025-07-26 22:22:49] 2025-07-27 02:22:16,746 | INFO     | task id: 45743349
[2025-07-26 22:22:49] 2025-07-27 02:22:16,746 | INFO     | errors: (none)
[2025-07-26 22:22:49] 2025-07-27 02:22:16,746 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 22:22:49] 2025-07-27 02:22:16,746 | INFO     | pilot state: finished 
[2025-07-26 22:22:49] 2025-07-27 02:22:16,746 | INFO     | transexitcode: 0
[2025-07-26 22:22:49] 2025-07-27 02:22:16,746 | INFO     | exeerrorcode: 0
[2025-07-26 22:22:49] 2025-07-27 02:22:16,746 | INFO     | exeerrordiag: 
[2025-07-26 22:22:49] 2025-07-27 02:22:16,746 | INFO     | exitcode: 0
[2025-07-26 22:22:49] 2025-07-27 02:22:16,747 | INFO     | exitmsg: OK
[2025-07-26 22:22:49] 2025-07-27 02:22:16,747 | INFO     | cpuconsumptiontime: 48383 s
[2025-07-26 22:22:49] 2025-07-27 02:22:16,747 | INFO     | nevents: 400
[2025-07-26 22:22:49] 2025-07-27 02:22:16,747 | INFO     | neventsw: 0
[2025-07-26 22:22:49] 2025-07-27 02:22:16,747 | INFO     | pid: 921359
[2025-07-26 22:22:49] 2025-07-27 02:22:16,747 | INFO     | pgrp: 921359
[2025-07-26 22:22:49] 2025-07-27 02:22:16,747 | INFO     | corecount: 8
[2025-07-26 22:22:49] 2025-07-27 02:22:16,747 | INFO     | event service: False
[2025-07-26 22:22:49] 2025-07-27 02:22:16,747 | INFO     | sizes: {0: 2397253, 1: 2397452, 6: 2397714, 11: 2397742, 6596: 2424684, 6599: 2433682, 6600: 2433866, 6609: 2434060}
[2025-07-26 22:22:49] 2025-07-27 02:22:16,747 | INFO     | --------------------------------------------------
[2025-07-26 22:22:49] 2025-07-27 02:22:16,747 | INFO     | 
[2025-07-26 22:22:49] 2025-07-27 02:22:16,747 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-26 22:22:49] 2025-07-27 02:22:16,773 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 22:22:49] 2025-07-27 02:22:16,773 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 22:22:49] 2025-07-27 02:22:16,773 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 22:22:49] 2025-07-27 02:22:16,773 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 22:22:49] 2025-07-27 02:22:16,773 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 22:22:49] 2025-07-27 02:22:16,773 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 22:22:49] 2025-07-27 02:22:16,773 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 22:22:49] 2025-07-27 02:22:16,773 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 22:22:49] 2025-07-27 02:22:16,774 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 22:22:49] 2025-07-27 02:22:16,774 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 22:22:49] 2025-07-27 02:22:16,774 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 22:22:49] 2025-07-27 02:22:16,774 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 22:22:49] 2025-07-27 02:22:16,774 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 22:22:49] 2025-07-27 02:22:16,774 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 22:22:49] 2025-07-27 02:22:16,774 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 22:22:49] 2025-07-27 02:22:16,774 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 22:22:49] 2025-07-27 02:22:16,774 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 22:22:49] 2025-07-27 02:22:16,774 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 22:22:49] 2025-07-27 02:22:16,774 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 22:22:49] 2025-07-27 02:22:16,774 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 22:22:49] 2025-07-27 02:22:16,774 | INFO     | job 6745263132 has completed (purged errors)
[2025-07-26 22:22:49] 2025-07-27 02:22:16,775 | INFO     | overall cleanup function is called
[2025-07-26 22:22:49] 2025-07-27 02:22:17,782 | INFO     | --- collectZombieJob: --- 10, [921359]
[2025-07-26 22:22:49] 2025-07-27 02:22:17,782 | INFO     | zombie collector waiting for pid 921359
[2025-07-26 22:22:49] 2025-07-27 02:22:17,784 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 22:22:49] 2025-07-27 02:22:17,784 | INFO     | collected zombie processes
[2025-07-26 22:22:49] 2025-07-27 02:22:17,784 | INFO     | will attempt to kill all subprocesses of pid=921359
[2025-07-26 22:22:49] 2025-07-27 02:22:18,212 | INFO     | process IDs to be killed: [921359] (in reverse order)
[2025-07-26 22:22:49] 2025-07-27 02:22:18,350 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 22:22:49] 2025-07-27 02:22:18,350 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 22:22:49] 2025-07-27 02:22:18,371 | INFO     | did not find any defunct processes belonging to 921359
[2025-07-26 22:22:49] 2025-07-27 02:22:18,391 | INFO     | did not find any defunct processes belonging to 921359
[2025-07-26 22:22:49] 2025-07-27 02:22:18,392 | INFO     | ready for new job
[2025-07-26 22:22:49] 2025-07-27 02:22:18,392 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 22:22:49] 2025-07-27 02:22:18,394 | INFO     | ***************************************
[2025-07-26 22:22:49] 2025-07-27 02:22:18,394 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 22:22:49] 2025-07-27 02:22:18,394 | INFO     | ***************************************
[2025-07-26 22:22:49] 2025-07-27 02:22:18,394 | INFO     | 
[2025-07-26 22:22:49] 2025-07-27 02:22:18,413 | INFO     | architecture information:
[2025-07-26 22:22:49] 2025-07-27 02:22:18,414 | INFO     | executing command: cat /etc/os-release
[2025-07-26 22:22:49] 2025-07-27 02:22:18,435 | INFO     | cat /etc/os-release:
[2025-07-26 22:22:49] NAME="CentOS Linux"
[2025-07-26 22:22:49] VERSION="7 (Core)"
[2025-07-26 22:22:49] ID="centos"
[2025-07-26 22:22:49] ID_LIKE="rhel fedora"
[2025-07-26 22:22:49] VERSION_ID="7"
[2025-07-26 22:22:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 22:22:49] ANSI_COLOR="0;31"
[2025-07-26 22:22:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 22:22:49] HOME_URL="https://www.centos.org/"
[2025-07-26 22:22:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 22:22:49] 
[2025-07-26 22:22:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 22:22:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 22:22:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 22:22:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 22:22:49] 
[2025-07-26 22:22:49] 2025-07-27 02:22:18,435 | INFO     | ***************************************
[2025-07-26 22:22:49] 2025-07-27 02:22:18,939 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-26 22:22:49] 2025-07-27 02:22:18,959 | INFO     | sufficient remaining disk space (95714017280 B)
[2025-07-26 22:22:49] 2025-07-27 02:22:18,960 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 22:22:49] 2025-07-27 02:22:18,960 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 22:22:49] 2025-07-27 02:22:18,960 | INFO     | update_server=False
[2025-07-26 22:22:49] 2025-07-27 02:22:18,960 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 22:22:49] 2025-07-27 02:22:18,961 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 22:22:49] 2025-07-27 02:22:19,006 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-26 22:22:49] 2025-07-27 02:22:19,006 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-26 22:22:49] 2025-07-27 02:22:19,006 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 22:22:49] 2025-07-27 02:22:19,006 | INFO     | will abort loop
[2025-07-26 22:22:49] 2025-07-27 02:22:19,483 | INFO     | all payload control threads have been joined
[2025-07-26 22:22:49] 2025-07-27 02:22:19,697 | INFO     | all job control threads have been joined
[2025-07-26 22:22:49] 2025-07-27 02:22:19,955 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 22:22:49] 2025-07-27 02:22:19,965 | INFO     | [job] retrieve thread has finished
[2025-07-26 22:22:49] 2025-07-27 02:22:19,986 | INFO     | all data control threads have been joined
[2025-07-26 22:22:49] 2025-07-27 02:22:20,011 | INFO     | [job] job monitor thread has finished
[2025-07-26 22:22:49] 2025-07-27 02:22:20,029 | INFO     | [data] copytool_in thread has finished
[2025-07-26 22:22:49] 2025-07-27 02:22:20,415 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 22:22:49] 2025-07-27 02:22:20,425 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 22:22:49] 2025-07-27 02:22:20,488 | INFO     | [payload] control thread has finished
[2025-07-26 22:22:49] 2025-07-27 02:22:20,506 | INFO     | [payload] failed_post thread has finished
[2025-07-26 22:22:49] 2025-07-27 02:22:20,702 | INFO     | [job] control thread has finished
[2025-07-26 22:22:49] 2025-07-27 02:22:20,991 | INFO     | [data] control thread has finished
[2025-07-26 22:22:49] 2025-07-27 02:22:21,202 | INFO     | [job] validate thread has finished
[2025-07-26 22:22:49] 2025-07-27 02:22:21,452 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 22:22:49] 2025-07-27 02:22:21,516 | INFO     | [payload] validate_post thread has finished
[2025-07-26 22:22:49] 2025-07-27 02:22:21,757 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 22:22:49] 2025-07-27 02:22:21,960 | INFO     | [data] copytool_out thread has finished
[2025-07-26 22:22:49] 2025-07-27 02:22:22,763 | INFO     | [job] queue monitor thread has finished
[2025-07-26 22:22:49] 2025-07-27 02:22:22,967 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 22:22:49] 2025-07-27 02:22:29,788 | INFO     | job.realtimelogging is not enabled
[2025-07-26 22:22:49] 2025-07-27 02:22:30,793 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 22:22:49] 2025-07-27 02:22:32,513 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140363388884800)>', '<ExcThread(monitor, started 140362676954880)>']
[2025-07-26 22:22:49] 2025-07-27 02:22:37,538 | INFO     | all workflow threads have been joined
[2025-07-26 22:22:49] 2025-07-27 02:22:37,539 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 22:22:49] 2025-07-27 02:22:37,540 | INFO     | traces error code: 0
[2025-07-26 22:22:49] 2025-07-27 02:22:37,540 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 22:22:49] 2025-07-27 02:22:49,261 | INFO     | PID=914397 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-26 22:22:49] 2025-07-27 02:22:49,261 | INFO     | .. there are 32 such processes running
[2025-07-26 22:22:49] 2025-07-27 02:22:49,262 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 22:22:49] 2025-07-27 02:22:49,262 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 22:22:49] 2025-07-27 02:22:49,262 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 22:22:49] 2025-07-27 02:22:49,262 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 22:22:49] 2025-07-27 02:22:49,262 | INFO     | [monitor] control thread has ended
[2025-07-26 22:22:49] 2025-07-27 02:22:49,484 [wrapper] ==== pilot stdout END ====
[2025-07-26 22:22:49] 2025-07-27 02:22:49,488 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 22:22:49] 2025-07-27 02:22:49,491 [wrapper] pilotpid: 914397
[2025-07-26 22:22:49] 2025-07-27 02:22:49,495 [wrapper] Pilot exit status: 0
[2025-07-26 22:22:49] 2025-07-27 02:22:49,512 [wrapper] pandaids: 6745263132
[2025-07-26 22:22:49] 2025-07-27 02:22:49,616 [wrapper] cleanup supervisor_pilot 1395853 914398
[2025-07-26 22:22:49] 2025-07-27 02:22:49,619 [wrapper] Test setup, not cleaning
[2025-07-26 22:22:49] 2025-07-27 02:22:49,623 [wrapper] apfmon messages muted
[2025-07-26 22:22:49] 2025-07-27 02:22:49,626 [wrapper] ==== wrapper stdout END ====
[2025-07-26 22:22:49] 2025-07-27 02:22:49,630 [wrapper] ==== wrapper stderr END ====
[2025-07-26 22:22:49]  *** Error codes and diagnostics ***
[2025-07-26 22:22:49]     "exeErrorCode": 0,
[2025-07-26 22:22:49]     "exeErrorDiag": "",
[2025-07-26 22:22:49]     "pilotErrorCode": 0,
[2025-07-26 22:22:49]     "pilotErrorDiag": "",
[2025-07-26 22:22:49]  *** Listing of results directory ***
[2025-07-26 22:22:49] total 349880
[2025-07-26 22:22:49] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 11:50 pilot3.tar.gz
[2025-07-26 22:22:49] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 12:21 queuedata.json
[2025-07-26 22:22:49] -rwx------. 1 boincer umatlas     36292 Jul 26 12:23 runpilot2-wrapper.sh
[2025-07-26 22:22:49] -rw-r--r--. 1 boincer umatlas       100 Jul 26 20:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 22:22:49] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 20:31 run_atlas
[2025-07-26 22:22:49] -rw-r--r--. 1 boincer umatlas       105 Jul 26 20:31 job.xml
[2025-07-26 22:22:49] -rw-r--r--. 2 boincer umatlas 146771665 Jul 26 20:31 EVNT.45743347._002340.pool.root.1
[2025-07-26 22:22:49] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 20:31 start_atlas.sh
[2025-07-26 22:22:49] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 20:31 shared
[2025-07-26 22:22:49] -rw-r--r--. 2 boincer umatlas    542891 Jul 26 20:31 input.tar.gz
[2025-07-26 22:22:49] -rw-r--r--. 1 boincer umatlas         0 Jul 26 20:31 boinc_lockfile
[2025-07-26 22:22:49] -rw-r--r--. 1 boincer umatlas      2562 Jul 26 20:31 pandaJob.out
[2025-07-26 22:22:49] -rw-------. 1 boincer umatlas    980117 Jul 26 20:31 agis_schedconf.cvmfs.json
[2025-07-26 22:22:49] -rw-------. 1 boincer umatlas   1593052 Jul 26 20:31 agis_ddmendpoints.agis.ALL.json
[2025-07-26 22:22:49] drwx------. 4 boincer umatlas      4096 Jul 26 20:31 pilot3
[2025-07-26 22:22:49] -rw-r--r--. 1 boincer umatlas      6856 Jul 26 22:18 init_data.xml
[2025-07-26 22:22:49] -rw-------. 1 boincer umatlas 205740283 Jul 26 22:21 HITS.45743349._040924.pool.root.1
[2025-07-26 22:22:49] -rw-r--r--. 1 boincer umatlas       529 Jul 26 22:21 boinc_task_state.xml
[2025-07-26 22:22:49] -rw-------. 1 boincer umatlas      1041 Jul 26 22:22 memory_monitor_summary.json
[2025-07-26 22:22:49] -rw-------. 1 boincer umatlas    325911 Jul 26 22:22 log.45743349._040924.job.log.tgz.1
[2025-07-26 22:22:49] -rw-------. 1 boincer umatlas      7828 Jul 26 22:22 heartbeat.json
[2025-07-26 22:22:49] -rw-r--r--. 1 boincer umatlas        27 Jul 26 22:22 wrapper_checkpoint.txt
[2025-07-26 22:22:49] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 22:22 boinc_mmap_file
[2025-07-26 22:22:49] -rw-------. 1 boincer umatlas        95 Jul 26 22:22 pilot_heartbeat.json
[2025-07-26 22:22:49] -rw-------. 1 boincer umatlas       822 Jul 26 22:22 pilotlog.txt
[2025-07-26 22:22:49] -rw-------. 1 boincer umatlas    622136 Jul 26 22:22 log.45743349._040924.job.log.1
[2025-07-26 22:22:49] -rw-------. 1 boincer umatlas       357 Jul 26 22:22 output.list
[2025-07-26 22:22:49] -rw-r--r--. 1 boincer umatlas       620 Jul 26 22:22 runtime_log
[2025-07-26 22:22:49] -rw-------. 1 boincer umatlas    962560 Jul 26 22:22 result.tar.gz
[2025-07-26 22:22:49] -rw-r--r--. 1 boincer umatlas      8670 Jul 26 22:22 runtime_log.err
[2025-07-26 22:22:49] -rw-------. 1 boincer umatlas       653 Jul 26 22:22 gPdNDmmrwz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZaSLDmBFEvMo.diag
[2025-07-26 22:22:49] -rw-r--r--. 1 boincer umatlas     21106 Jul 26 22:22 stderr.txt
[2025-07-26 22:22:49] HITS file was successfully produced:
[2025-07-26 22:22:49] -rw-------. 1 boincer umatlas 205740283 Jul 26 22:21 shared/HITS.pool.root.1
[2025-07-26 22:22:49]  *** Contents of shared directory: ***
[2025-07-26 22:22:49] total 345748
[2025-07-26 22:22:49] -rw-r--r--. 2 boincer umatlas 146771665 Jul 26 20:31 ATLAS.root_0
[2025-07-26 22:22:49] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 20:31 start_atlas.sh
[2025-07-26 22:22:49] -rw-r--r--. 2 boincer umatlas    542891 Jul 26 20:31 input.tar.gz
[2025-07-26 22:22:49] -rw-------. 1 boincer umatlas 205740283 Jul 26 22:21 HITS.pool.root.1
[2025-07-26 22:22:49] -rw-------. 1 boincer umatlas    962560 Jul 26 22:22 result.tar.gz
22:22:51 (910788): run_atlas exited; CPU time 48650.315729
22:22:51 (910788): called boinc_finish(0)

</stderr_txt>
]]>

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