Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:21:37 (21360): wrapper (7.7.26015): starting
20:21:37 (21360): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 20:21:37] Arguments: --nthreads 12
[2025-07-26 20:21:37] Threads: 12
[2025-07-26 20:21:37] Checking for CVMFS
[2025-07-26 20:21:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 20:21:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 20:21:37] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 20:21:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 20:21:37] 2.11.2.0 2947 111229 95420 148794 0 57 14295608 20275201 1 130560 0 37387723 99.970 9747818 9631 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 20:21:37] CVMFS is ok
[2025-07-26 20:21:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 20:21:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 20:21:37] Further information can be found at the LHC@home message board.
[2025-07-26 20:21:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 20:21:37] Checking for apptainer binary...
[2025-07-26 20:21:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 20:21:37] Running /usr/bin/apptainer --version
[2025-07-26 20:21:37] apptainer version 1.3.2-1.el7
[2025-07-26 20:21:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 20:21:39] c-205-18.aglt2.org
[2025-07-26 20:21:39] apptainer works
[2025-07-26 20:21:39] Set ATHENA_PROC_NUMBER=12
[2025-07-26 20:21:39] Set ATHENA_CORE_NUMBER=12
[2025-07-26 20:21:39] Starting ATLAS job with PandaID=6745355097
[2025-07-26 20:21:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 21:45:42]  *** The last 200 lines of the pilot log: ***
[2025-07-26 21:45:42] 2025-07-27 01:45:00,333 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 21:45:42] 2025-07-27 01:45:00,333 | INFO     | summary of transferred files:
[2025-07-26 21:45:42] 2025-07-27 01:45:00,333 | INFO     |  -- lfn=log.45743349._043216.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 21:45:42] 2025-07-27 01:45:00,334 | INFO     | stage-out finished correctly
[2025-07-26 21:45:42] 2025-07-27 01:45:00,510 | WARNING  | process 31420 can no longer be monitored (due to stat problems) - aborting
[2025-07-26 21:45:42] 2025-07-27 01:45:00,510 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745355097/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 21:45:42] 2025-07-27 01:45:00,511 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745355097/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 21:45:42] 2025-07-27 01:45:00,512 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4396066 B
[2025-07-26 21:45:42] 2025-07-27 01:45:00,512 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15307 B
[2025-07-26 21:45:42] 2025-07-27 01:45:00,512 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 21:45:42] 2025-07-27 01:45:00,529 | INFO     | sufficient remaining disk space (29341253632 B)
[2025-07-26 21:45:42] 2025-07-27 01:45:00,529 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-26 21:45:42] 2025-07-27 01:45:00,530 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6745355097: 4697602 B (within 2537553920 B limit)
[2025-07-26 21:45:42] 2025-07-27 01:45:00,530 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6745355097/HITS.45743349._043216.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-26 21:45:42] 2025-07-27 01:45:00,531 | INFO     | total size of present files: 0 B (workdir size: 4697602 B)
[2025-07-26 21:45:42] 2025-07-27 01:45:00,531 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6745355097/HITS.45743349._043216.pool.root.1 since it does not exist
[2025-07-26 21:45:42] 2025-07-27 01:45:00,621 | INFO     | number of running child processes to parent process 31420: 1
[2025-07-26 21:45:42] 2025-07-27 01:45:00,621 | INFO     | maximum number of monitored processes: 6
[2025-07-26 21:45:42] 2025-07-27 01:45:00,718 | INFO     | 4990s have passed since pilot start - server update state is 'RUNNING'
[2025-07-26 21:45:42] 2025-07-27 01:45:03,011 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 21:45:42] 2025-07-27 01:45:03,125 | INFO     | monitor loop #372: job 0:6745355097 is in state 'finished'
[2025-07-26 21:45:42] 2025-07-27 01:45:03,125 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 21:45:42] 2025-07-27 01:45:04,492 | INFO     | job 6745355097 has state=finished
[2025-07-26 21:45:42] 2025-07-27 01:45:04,493 | INFO     | preparing for final server update for job 6745355097 in state='finished'
[2025-07-26 21:45:42] 2025-07-27 01:45:04,493 | INFO     | this job has now completed (state=finished)
[2025-07-26 21:45:42] 2025-07-27 01:45:04,493 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 21:45:42] 2025-07-27 01:45:04,494 | INFO     | log transfer has been attempted: DONE
[2025-07-26 21:45:42] 2025-07-27 01:45:04,494 | INFO     | job 6745355097 has finished - writing final server update
[2025-07-26 21:45:42] 2025-07-27 01:45:04,494 | INFO     | total number of processed events: 400 (read)
[2025-07-26 21:45:42] 2025-07-27 01:45:04,495 | INFO     | executing command: lscpu
[2025-07-26 21:45:42] 2025-07-27 01:45:04,522 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 21:45:42] 2025-07-27 01:45:05,628 | INFO     | monitor loop #373: job 0:6745355097 is in state 'finished'
[2025-07-26 21:45:42] 2025-07-27 01:45:05,628 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 21:45:42] 2025-07-27 01:45:07,849 | INFO     | PID=24965 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 21:45:42] 2025-07-27 01:45:08,131 | INFO     | monitor loop #374: job 0:6745355097 is in state 'finished'
[2025-07-26 21:45:42] 2025-07-27 01:45:08,132 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 21:45:42] 2025-07-27 01:45:09,463 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-26 21:45:42] 2025-07-27 01:45:09,467 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-07-26 21:45:42] 2025-07-27 01:45:09,469 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745355097/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 21:45:42] 2025-07-27 01:45:09,470 | INFO     | extracted standard info from prmon json
[2025-07-26 21:45:42] 2025-07-27 01:45:09,470 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 21:45:42] 2025-07-27 01:45:09,470 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 21:45:42] 2025-07-27 01:45:09,470 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 21:45:42] 2025-07-27 01:45:09,470 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 21:45:42] 2025-07-27 01:45:09,472 | INFO     | fitting pss+swap vs Time
[2025-07-26 21:45:42] 2025-07-27 01:45:09,472 | INFO     | sum of square deviations: 130793150.0
[2025-07-26 21:45:42] 2025-07-27 01:45:09,472 | INFO     | sum of deviations: -9913102436.0
[2025-07-26 21:45:42] 2025-07-27 01:45:09,472 | INFO     | mean x: 1753578305.0
[2025-07-26 21:45:42] 2025-07-27 01:45:09,472 | INFO     | mean y: 2850362.6
[2025-07-26 21:45:42] 2025-07-27 01:45:09,473 | INFO     | -- intersect: 132910432808.71626
[2025-07-26 21:45:42] 2025-07-27 01:45:09,473 | INFO     | intersect: 132910432808.71626
[2025-07-26 21:45:42] 2025-07-27 01:45:09,473 | INFO     | chi2: 0.06621520749342308
[2025-07-26 21:45:42] 2025-07-27 01:45:09,473 | INFO     | -- intersect: 132910432808.71626
[2025-07-26 21:45:42] 2025-07-27 01:45:09,473 | INFO     | current memory leak: -75.79 B/s (using 75 data points, chi2=0.07)
[2025-07-26 21:45:42] 2025-07-27 01:45:09,473 | INFO     | could have reported an average CPU frequency of 2041 MHz (6 samples)
[2025-07-26 21:45:42] 2025-07-27 01:45:09,474 | INFO     | ..............................
[2025-07-26 21:45:42] 2025-07-27 01:45:09,474 | INFO     | . Timing measurements:
[2025-07-26 21:45:42] 2025-07-27 01:45:09,474 | INFO     | . get job = 0 s
[2025-07-26 21:45:42] 2025-07-27 01:45:09,474 | INFO     | . initial setup = 2 s
[2025-07-26 21:45:42] 2025-07-27 01:45:09,474 | INFO     | . payload setup = 9 s
[2025-07-26 21:45:42] 2025-07-27 01:45:09,474 | INFO     | . stage-in = 0 s
[2025-07-26 21:45:42] 2025-07-27 01:45:09,474 | INFO     | . payload execution = 4956 s
[2025-07-26 21:45:42] 2025-07-27 01:45:09,474 | INFO     | . stage-out = 0 s
[2025-07-26 21:45:42] 2025-07-27 01:45:09,474 | INFO     | . log creation = 0 s
[2025-07-26 21:45:42] 2025-07-27 01:45:09,474 | INFO     | ..............................
[2025-07-26 21:45:42] 2025-07-27 01:45:09,828 | INFO     | 
[2025-07-26 21:45:42] 2025-07-27 01:45:09,829 | INFO     | job summary report
[2025-07-26 21:45:42] 2025-07-27 01:45:09,829 | INFO     | --------------------------------------------------
[2025-07-26 21:45:42] 2025-07-27 01:45:09,829 | INFO     | PanDA job id: 6745355097
[2025-07-26 21:45:42] 2025-07-27 01:45:09,829 | INFO     | task id: 45743349
[2025-07-26 21:45:42] 2025-07-27 01:45:09,829 | INFO     | errors: (none)
[2025-07-26 21:45:42] 2025-07-27 01:45:09,830 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 21:45:42] 2025-07-27 01:45:09,830 | INFO     | pilot state: finished 
[2025-07-26 21:45:42] 2025-07-27 01:45:09,830 | INFO     | transexitcode: 0
[2025-07-26 21:45:42] 2025-07-27 01:45:09,830 | INFO     | exeerrorcode: 0
[2025-07-26 21:45:42] 2025-07-27 01:45:09,830 | INFO     | exeerrordiag: 
[2025-07-26 21:45:42] 2025-07-27 01:45:09,830 | INFO     | exitcode: 0
[2025-07-26 21:45:42] 2025-07-27 01:45:09,830 | INFO     | exitmsg: OK
[2025-07-26 21:45:42] 2025-07-27 01:45:09,831 | INFO     | cpuconsumptiontime: 54390 s
[2025-07-26 21:45:42] 2025-07-27 01:45:09,831 | INFO     | nevents: 400
[2025-07-26 21:45:42] 2025-07-27 01:45:09,831 | INFO     | neventsw: 0
[2025-07-26 21:45:42] 2025-07-27 01:45:09,831 | INFO     | pid: 31420
[2025-07-26 21:45:42] 2025-07-27 01:45:09,831 | INFO     | pgrp: 31420
[2025-07-26 21:45:42] 2025-07-27 01:45:09,831 | INFO     | corecount: 12
[2025-07-26 21:45:42] 2025-07-27 01:45:09,832 | INFO     | event service: False
[2025-07-26 21:45:42] 2025-07-27 01:45:09,832 | INFO     | sizes: {0: 2397475, 5: 2397737, 11: 2397793, 4969: 2424071, 4972: 2433069, 4974: 2433153, 4981: 2433475}
[2025-07-26 21:45:42] 2025-07-27 01:45:09,832 | INFO     | --------------------------------------------------
[2025-07-26 21:45:42] 2025-07-27 01:45:09,832 | INFO     | 
[2025-07-26 21:45:42] 2025-07-27 01:45:09,832 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 21:45:42] 2025-07-27 01:45:09,857 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 21:45:42] 2025-07-27 01:45:09,858 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 21:45:42] 2025-07-27 01:45:09,858 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 21:45:42] 2025-07-27 01:45:09,858 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 21:45:42] 2025-07-27 01:45:09,858 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 21:45:42] 2025-07-27 01:45:09,858 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 21:45:42] 2025-07-27 01:45:09,859 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 21:45:42] 2025-07-27 01:45:09,859 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 21:45:42] 2025-07-27 01:45:09,859 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 21:45:42] 2025-07-27 01:45:09,859 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 21:45:42] 2025-07-27 01:45:09,859 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 21:45:42] 2025-07-27 01:45:09,859 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 21:45:42] 2025-07-27 01:45:09,860 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 21:45:42] 2025-07-27 01:45:09,860 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 21:45:42] 2025-07-27 01:45:09,860 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 21:45:42] 2025-07-27 01:45:09,860 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 21:45:42] 2025-07-27 01:45:09,860 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 21:45:42] 2025-07-27 01:45:09,860 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 21:45:42] 2025-07-27 01:45:09,861 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 21:45:42] 2025-07-27 01:45:09,861 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 21:45:42] 2025-07-27 01:45:09,861 | INFO     | job 6745355097 has completed (purged errors)
[2025-07-26 21:45:42] 2025-07-27 01:45:09,861 | INFO     | overall cleanup function is called
[2025-07-26 21:45:42] 2025-07-27 01:45:10,865 | INFO     | --- collectZombieJob: --- 10, [31420]
[2025-07-26 21:45:42] 2025-07-27 01:45:10,865 | INFO     | zombie collector waiting for pid 31420
[2025-07-26 21:45:42] 2025-07-27 01:45:10,865 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 21:45:42] 2025-07-27 01:45:10,865 | INFO     | collected zombie processes
[2025-07-26 21:45:42] 2025-07-27 01:45:10,865 | INFO     | will attempt to kill all subprocesses of pid=31420
[2025-07-26 21:45:42] 2025-07-27 01:45:10,959 | INFO     | process IDs to be killed: [31420] (in reverse order)
[2025-07-26 21:45:42] 2025-07-27 01:45:11,010 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 21:45:42] 2025-07-27 01:45:11,010 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 21:45:42] 2025-07-27 01:45:11,014 | INFO     | did not find any defunct processes belonging to 31420
[2025-07-26 21:45:42] 2025-07-27 01:45:11,017 | INFO     | did not find any defunct processes belonging to 31420
[2025-07-26 21:45:42] 2025-07-27 01:45:11,018 | INFO     | ready for new job
[2025-07-26 21:45:42] 2025-07-27 01:45:11,018 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 21:45:42] 2025-07-27 01:45:11,019 | INFO     | ***************************************
[2025-07-26 21:45:42] 2025-07-27 01:45:11,019 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 21:45:42] 2025-07-27 01:45:11,019 | INFO     | ***************************************
[2025-07-26 21:45:42] 2025-07-27 01:45:11,019 | INFO     | 
[2025-07-26 21:45:42] 2025-07-27 01:45:11,020 | INFO     | architecture information:
[2025-07-26 21:45:42] 2025-07-27 01:45:11,021 | INFO     | executing command: cat /etc/os-release
[2025-07-26 21:45:42] 2025-07-27 01:45:11,036 | INFO     | cat /etc/os-release:
[2025-07-26 21:45:42] NAME="CentOS Linux"
[2025-07-26 21:45:42] VERSION="7 (Core)"
[2025-07-26 21:45:42] ID="centos"
[2025-07-26 21:45:42] ID_LIKE="rhel fedora"
[2025-07-26 21:45:42] VERSION_ID="7"
[2025-07-26 21:45:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 21:45:42] ANSI_COLOR="0;31"
[2025-07-26 21:45:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 21:45:42] HOME_URL="https://www.centos.org/"
[2025-07-26 21:45:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 21:45:42] 
[2025-07-26 21:45:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 21:45:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 21:45:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 21:45:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 21:45:42] 
[2025-07-26 21:45:42] 2025-07-27 01:45:11,036 | INFO     | ***************************************
[2025-07-26 21:45:42] 2025-07-27 01:45:11,539 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 21:45:42] 2025-07-27 01:45:11,555 | INFO     | sufficient remaining disk space (29346496512 B)
[2025-07-26 21:45:42] 2025-07-27 01:45:11,555 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 21:45:42] 2025-07-27 01:45:11,556 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 21:45:42] 2025-07-27 01:45:11,556 | INFO     | update_server=False
[2025-07-26 21:45:42] 2025-07-27 01:45:11,556 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 21:45:42] 2025-07-27 01:45:11,556 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 21:45:42] 2025-07-27 01:45:11,557 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 21:45:42] 2025-07-27 01:45:11,640 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 21:45:42] 2025-07-27 01:45:11,640 | INFO     | aborting loop
[2025-07-26 21:45:42] 2025-07-27 01:45:11,861 | INFO     | all data control threads have been joined
[2025-07-26 21:45:42] 2025-07-27 01:45:12,309 | INFO     | all job control threads have been joined
[2025-07-26 21:45:42] 2025-07-27 01:45:12,561 | INFO     | [job] retrieve thread has finished
[2025-07-26 21:45:42] 2025-07-27 01:45:12,562 | INFO     | [job] queue monitor thread has finished
[2025-07-26 21:45:42] 2025-07-27 01:45:12,568 | INFO     | [job] validate thread has finished
[2025-07-26 21:45:42] 2025-07-27 01:45:12,612 | INFO     | all payload control threads have been joined
[2025-07-26 21:45:42] 2025-07-27 01:45:12,646 | INFO     | [job] job monitor thread has finished
[2025-07-26 21:45:42] 2025-07-27 01:45:12,689 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 21:45:42] 2025-07-27 01:45:12,864 | INFO     | [data] control thread has finished
[2025-07-26 21:45:42] 2025-07-27 01:45:12,977 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 21:45:42] 2025-07-27 01:45:12,998 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 21:45:42] 2025-07-27 01:45:13,316 | INFO     | [job] control thread has finished
[2025-07-26 21:45:42] 2025-07-27 01:45:13,344 | INFO     | [data] copytool_in thread has finished
[2025-07-26 21:45:42] 2025-07-27 01:45:13,562 | INFO     | [data] copytool_out thread has finished
[2025-07-26 21:45:42] 2025-07-27 01:45:13,604 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 21:45:42] 2025-07-27 01:45:13,617 | INFO     | [payload] control thread has finished
[2025-07-26 21:45:42] 2025-07-27 01:45:13,696 | INFO     | [payload] validate_post thread has finished
[2025-07-26 21:45:42] 2025-07-27 01:45:14,003 | INFO     | [payload] failed_post thread has finished
[2025-07-26 21:45:42] 2025-07-27 01:45:17,610 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 21:45:42] 2025-07-27 01:45:22,171 | INFO     | job.realtimelogging is not enabled
[2025-07-26 21:45:42] 2025-07-27 01:45:23,172 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 21:45:42] 2025-07-27 01:45:24,594 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139957036001088)>', '<ExcThread(monitor, started 139955921737472)>']
[2025-07-26 21:45:42] 2025-07-27 01:45:29,597 | INFO     | all workflow threads have been joined
[2025-07-26 21:45:42] 2025-07-27 01:45:29,597 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 21:45:42] 2025-07-27 01:45:29,597 | INFO     | traces error code: 0
[2025-07-26 21:45:42] 2025-07-27 01:45:29,598 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 21:45:42] 2025-07-27 01:45:42,055 | INFO     | PID=24965 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 21:45:42] 2025-07-27 01:45:42,060 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 21:45:42] 2025-07-27 01:45:42,060 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 21:45:42] 2025-07-27 01:45:42,060 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 21:45:42] 2025-07-27 01:45:42,060 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 21:45:42] 2025-07-27 01:45:42,060 | CRITICAL | thread 'MainThread' is not alive
[2025-07-26 21:45:42] 2025-07-27 01:45:42,060 | INFO     | [monitor] control thread has ended
[2025-07-26 21:45:42] 2025-07-27 01:45:42,146 [wrapper] ==== pilot stdout END ====
[2025-07-26 21:45:42] 2025-07-27 01:45:42,150 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 21:45:42] 2025-07-27 01:45:42,154 [wrapper] pilotpid: 24965
[2025-07-26 21:45:42] 2025-07-27 01:45:42,157 [wrapper] Pilot exit status: 0
[2025-07-26 21:45:42] 2025-07-27 01:45:42,173 [wrapper] pandaids: 6745355097
[2025-07-26 21:45:42] 2025-07-27 01:45:42,213 [wrapper] cleanup supervisor_pilot 13510 24966
[2025-07-26 21:45:42] 2025-07-27 01:45:42,217 [wrapper] Test setup, not cleaning
[2025-07-26 21:45:42] 2025-07-27 01:45:42,221 [wrapper] apfmon messages muted
[2025-07-26 21:45:42] 2025-07-27 01:45:42,225 [wrapper] ==== wrapper stdout END ====
[2025-07-26 21:45:42] 2025-07-27 01:45:42,229 [wrapper] ==== wrapper stderr END ====
[2025-07-26 21:45:42]  *** Error codes and diagnostics ***
[2025-07-26 21:45:42]     "exeErrorCode": 0,
[2025-07-26 21:45:42]     "exeErrorDiag": "",
[2025-07-26 21:45:42]     "pilotErrorCode": 0,
[2025-07-26 21:45:42]     "pilotErrorDiag": "",
[2025-07-26 21:45:42]  *** Listing of results directory ***
[2025-07-26 21:45:42] total 436828
[2025-07-26 21:45:42] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 15:27 pilot3.tar.gz
[2025-07-26 21:45:42] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 15:31 queuedata.json
[2025-07-26 21:45:42] -rwx------ 1 boincer umatlas     36292 Jul 26 15:32 runpilot2-wrapper.sh
[2025-07-26 21:45:42] -rw-r--r-- 1 boincer umatlas       100 Jul 26 20:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 21:45:42] -rwxr-xr-x 1 boincer umatlas      7986 Jul 26 20:21 run_atlas
[2025-07-26 21:45:42] -rw-r--r-- 1 boincer umatlas       105 Jul 26 20:21 job.xml
[2025-07-26 21:45:42] -rw-r--r-- 2 boincer umatlas 228982005 Jul 26 20:21 EVNT.45743347._002468.pool.root.1
[2025-07-26 21:45:42] drwxrwx--x 2 boincer umatlas      4096 Jul 26 20:21 shared
[2025-07-26 21:45:42] -rw-r--r-- 2 boincer umatlas    542890 Jul 26 20:21 input.tar.gz
[2025-07-26 21:45:42] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 20:21 start_atlas.sh
[2025-07-26 21:45:42] -rw-r--r-- 1 boincer umatlas         0 Jul 26 20:21 boinc_lockfile
[2025-07-26 21:45:42] -rw-r--r-- 1 boincer umatlas      2563 Jul 26 20:21 pandaJob.out
[2025-07-26 21:45:42] -rw------- 1 boincer umatlas    980117 Jul 26 20:21 agis_schedconf.cvmfs.json
[2025-07-26 21:45:42] -rw------- 1 boincer umatlas   1593052 Jul 26 20:21 agis_ddmendpoints.agis.ALL.json
[2025-07-26 21:45:42] drwx------ 4 boincer umatlas      4096 Jul 26 20:21 pilot3
[2025-07-26 21:45:42] -rw-r--r-- 1 boincer umatlas      5868 Jul 26 21:36 init_data.xml
[2025-07-26 21:45:42] -rw------- 1 boincer umatlas 212754239 Jul 26 21:44 HITS.45743349._043216.pool.root.1
[2025-07-26 21:45:42] -rw-r--r-- 1 boincer umatlas       529 Jul 26 21:44 boinc_task_state.xml
[2025-07-26 21:45:42] -rw------- 1 boincer umatlas      1049 Jul 26 21:44 memory_monitor_summary.json
[2025-07-26 21:45:42] -rw------- 1 boincer umatlas        95 Jul 26 21:44 pilot_heartbeat.json
[2025-07-26 21:45:42] -rw------- 1 boincer umatlas    374101 Jul 26 21:45 log.45743349._043216.job.log.tgz.1
[2025-07-26 21:45:42] -rw------- 1 boincer umatlas      7857 Jul 26 21:45 heartbeat.json
[2025-07-26 21:45:42] -rw-r--r-- 1 boincer umatlas      8192 Jul 26 21:45 boinc_mmap_file
[2025-07-26 21:45:42] -rw-r--r-- 1 boincer umatlas        27 Jul 26 21:45 wrapper_checkpoint.txt
[2025-07-26 21:45:42] -rw------- 1 boincer umatlas       815 Jul 26 21:45 pilotlog.txt
[2025-07-26 21:45:42] -rw------- 1 boincer umatlas    475686 Jul 26 21:45 log.45743349._043216.job.log.1
[2025-07-26 21:45:42] -rw------- 1 boincer umatlas       357 Jul 26 21:45 output.list
[2025-07-26 21:45:42] -rw-r--r-- 1 boincer umatlas       620 Jul 26 21:45 runtime_log
[2025-07-26 21:45:42] -rw------- 1 boincer umatlas    870400 Jul 26 21:45 result.tar.gz
[2025-07-26 21:45:42] -rw-r--r-- 1 boincer umatlas      8662 Jul 26 21:45 runtime_log.err
[2025-07-26 21:45:42] -rw------- 1 boincer umatlas       659 Jul 26 21:45 RLUKDmRozz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLwSLDma3a5Un.diag
[2025-07-26 21:45:42] -rw-r--r-- 1 boincer umatlas     22512 Jul 26 21:45 stderr.txt
[2025-07-26 21:45:42] HITS file was successfully produced:
[2025-07-26 21:45:42] -rw------- 1 boincer umatlas 212754239 Jul 26 21:44 shared/HITS.pool.root.1
[2025-07-26 21:45:42]  *** Contents of shared directory: ***
[2025-07-26 21:45:42] total 432788
[2025-07-26 21:45:42] -rw-r--r-- 2 boincer umatlas 228982005 Jul 26 20:21 ATLAS.root_0
[2025-07-26 21:45:42] -rw-r--r-- 2 boincer umatlas    542890 Jul 26 20:21 input.tar.gz
[2025-07-26 21:45:42] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 20:21 start_atlas.sh
[2025-07-26 21:45:42] -rw------- 1 boincer umatlas 212754239 Jul 26 21:44 HITS.pool.root.1
[2025-07-26 21:45:42] -rw------- 1 boincer umatlas    870400 Jul 26 21:45 result.tar.gz
21:45:43 (21360): run_atlas exited; CPU time 54367.148716
21:45:43 (21360): called boinc_finish(0)

</stderr_txt>
]]>

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