Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:22:00 (662892): wrapper (7.7.26015): starting
20:22:00 (662892): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 20:22:00] Arguments: --nthreads 8
[2025-07-26 20:22:00] Threads: 8
[2025-07-26 20:22:00] Checking for CVMFS
[2025-07-26 20:22:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 20:22:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 20:22:00] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 20:22:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 20:22:00] 2.13.1.0 5097 13251 186108 148794 3 196 24178112 40960001 7370 16776704 0 33826381 99.924 17622776 43577 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 20:22:00] CVMFS is ok
[2025-07-26 20:22:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 20:22:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 20:22:01] Further information can be found at the LHC@home message board.
[2025-07-26 20:22:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 20:22:01] Checking for apptainer binary...
[2025-07-26 20:22:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 20:22:01] Running /usr/bin/apptainer --version
[2025-07-26 20:22:01] apptainer version 1.4.1-1.el9
[2025-07-26 20:22:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 20:22:01] c-212-6.aglt2.org
[2025-07-26 20:22:01] apptainer works
[2025-07-26 20:22:01] Set ATHENA_PROC_NUMBER=8
[2025-07-26 20:22:01] Set ATHENA_CORE_NUMBER=8
[2025-07-26 20:22:01] Starting ATLAS job with PandaID=6745230324
[2025-07-26 20:22:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 21:37:12]  *** The last 200 lines of the pilot log: ***
[2025-07-26 21:37:12]  is_tar=False
[2025-07-26 21:37:12]  lfn=log.45743349._040221.job.log.tgz.1
[2025-07-26 21:37:12]  mtime=0
[2025-07-26 21:37:12]  protocol_id=None
[2025-07-26 21:37:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 21:37:12]  replicas=None
[2025-07-26 21:37:12]  scope=mc23_13p6TeV
[2025-07-26 21:37:12]  status=None
[2025-07-26 21:37:12]  status_code=0
[2025-07-26 21:37:12]  storage_token=
[2025-07-26 21:37:12]  surl=/tmp/boinchome/slots/11/PanDA_Pilot-6745230324/log.45743349._040221.job.log.tgz.1
[2025-07-26 21:37:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dd/fe/log.45743349._040221.job.log.tgz.1
[2025-07-26 21:37:12]  workdir=None
[2025-07-26 21:37:12] ]
[2025-07-26 21:37:12] 2025-07-27 01:36:32,600 | INFO     | transferring file log.45743349._040221.job.log.tgz.1 from /tmp/boinchome/slots/11/PanDA_Pilot-6745230324/log.45743349._040221.job.log.tgz.1 to /tmp/boinchome/slots
[2025-07-26 21:37:12] 2025-07-27 01:36:32,601 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/11/PanDA_Pilot-6745230324/log.45743349._040221.job.log.tgz.1 /tmp/boinchome/slots/11/log.45743349._040221.j
[2025-07-26 21:37:12] 2025-07-27 01:36:32,616 | INFO     | adding to output.list: log.45743349._040221.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dd/fe/log.45743349._040221.job.log.tg
[2025-07-26 21:37:12] 2025-07-27 01:36:32,616 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 21:37:12] 2025-07-27 01:36:32,616 | INFO     | summary of transferred files:
[2025-07-26 21:37:12] 2025-07-27 01:36:32,616 | INFO     |  -- lfn=log.45743349._040221.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 21:37:12] 2025-07-27 01:36:32,616 | INFO     | stage-out finished correctly
[2025-07-26 21:37:12] 2025-07-27 01:36:33,642 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 21:37:12] 2025-07-27 01:36:33,728 | INFO     | job 6745230324 has state=finished
[2025-07-26 21:37:12] 2025-07-27 01:36:33,728 | INFO     | preparing for final server update for job 6745230324 in state='finished'
[2025-07-26 21:37:12] 2025-07-27 01:36:33,729 | INFO     | this job has now completed (state=finished)
[2025-07-26 21:37:12] 2025-07-27 01:36:33,729 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 21:37:12] 2025-07-27 01:36:33,729 | INFO     | log transfer has been attempted: DONE
[2025-07-26 21:37:12] 2025-07-27 01:36:33,729 | INFO     | job 6745230324 has finished - writing final server update
[2025-07-26 21:37:12] 2025-07-27 01:36:33,730 | INFO     | total number of processed events: 400 (read)
[2025-07-26 21:37:12] 2025-07-27 01:36:33,730 | INFO     | executing command: lscpu
[2025-07-26 21:37:12] 2025-07-27 01:36:33,737 | INFO     | monitor loop #324: job 0:6745230324 is in state 'finished'
[2025-07-26 21:37:12] 2025-07-27 01:36:33,737 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 21:37:12] 2025-07-27 01:36:33,796 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 21:37:12] 2025-07-27 01:36:36,245 | INFO     | monitor loop #325: job 0:6745230324 is in state 'finished'
[2025-07-26 21:37:12] 2025-07-27 01:36:36,246 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 21:37:12] 2025-07-27 01:36:38,530 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 21:37:12] 2025-07-27 01:36:38,536 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3314.409687500001
[2025-07-26 21:37:12] 2025-07-27 01:36:38,549 | INFO     | using path: /tmp/boinchome/slots/11/PanDA_Pilot-6745230324/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 21:37:12] 2025-07-27 01:36:38,550 | INFO     | extracted standard info from prmon json
[2025-07-26 21:37:12] 2025-07-27 01:36:38,550 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 21:37:12] 2025-07-27 01:36:38,550 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 21:37:12] 2025-07-27 01:36:38,550 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 21:37:12] 2025-07-27 01:36:38,550 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 21:37:12] 2025-07-27 01:36:38,552 | INFO     | fitting pss+swap vs Time
[2025-07-26 21:37:12] 2025-07-27 01:36:38,552 | INFO     | sum of square deviations: 89127252.5
[2025-07-26 21:37:12] 2025-07-27 01:36:38,552 | INFO     | sum of deviations: -268798482.5
[2025-07-26 21:37:12] 2025-07-27 01:36:38,552 | INFO     | mean x: 1753578041.5
[2025-07-26 21:37:12] 2025-07-27 01:36:38,552 | INFO     | mean y: 2536660.257575758
[2025-07-26 21:37:12] 2025-07-27 01:36:38,552 | INFO     | -- intersect: 5291144838.777631
[2025-07-26 21:37:12] 2025-07-27 01:36:38,552 | INFO     | intersect: 5291144838.777631
[2025-07-26 21:37:12] 2025-07-27 01:36:38,552 | INFO     | chi2: 0.0017779856972587307
[2025-07-26 21:37:12] 2025-07-27 01:36:38,552 | INFO     | -- intersect: 5291144838.777631
[2025-07-26 21:37:12] 2025-07-27 01:36:38,553 | INFO     | current memory leak: -3.02 B/s (using 66 data points, chi2=0.00)
[2025-07-26 21:37:12] 2025-07-27 01:36:38,553 | INFO     | could have reported an average CPU frequency of 3365 MHz (6 samples)
[2025-07-26 21:37:12] 2025-07-27 01:36:38,554 | INFO     | ..............................
[2025-07-26 21:37:12] 2025-07-27 01:36:38,554 | INFO     | . Timing measurements:
[2025-07-26 21:37:12] 2025-07-27 01:36:38,554 | INFO     | . get job = 0 s
[2025-07-26 21:37:12] 2025-07-27 01:36:38,554 | INFO     | . initial setup = 2 s
[2025-07-26 21:37:12] 2025-07-27 01:36:38,554 | INFO     | . payload setup = 6 s
[2025-07-26 21:37:12] 2025-07-27 01:36:38,554 | INFO     | . stage-in = 0 s
[2025-07-26 21:37:12] 2025-07-27 01:36:38,554 | INFO     | . payload execution = 4438 s
[2025-07-26 21:37:12] 2025-07-27 01:36:38,554 | INFO     | . stage-out = 0 s
[2025-07-26 21:37:12] 2025-07-27 01:36:38,554 | INFO     | . log creation = 0 s
[2025-07-26 21:37:12] 2025-07-27 01:36:38,554 | INFO     | ..............................
[2025-07-26 21:37:12] 2025-07-27 01:36:39,056 | INFO     | 
[2025-07-26 21:37:12] 2025-07-27 01:36:39,057 | INFO     | job summary report
[2025-07-26 21:37:12] 2025-07-27 01:36:39,057 | INFO     | --------------------------------------------------
[2025-07-26 21:37:12] 2025-07-27 01:36:39,057 | INFO     | PanDA job id: 6745230324
[2025-07-26 21:37:12] 2025-07-27 01:36:39,057 | INFO     | task id: 45743349
[2025-07-26 21:37:12] 2025-07-27 01:36:39,058 | INFO     | errors: (none)
[2025-07-26 21:37:12] 2025-07-27 01:36:39,058 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 21:37:12] 2025-07-27 01:36:39,058 | INFO     | pilot state: finished 
[2025-07-26 21:37:12] 2025-07-27 01:36:39,058 | INFO     | transexitcode: 0
[2025-07-26 21:37:12] 2025-07-27 01:36:39,058 | INFO     | exeerrorcode: 0
[2025-07-26 21:37:12] 2025-07-27 01:36:39,058 | INFO     | exeerrordiag: 
[2025-07-26 21:37:12] 2025-07-27 01:36:39,058 | INFO     | exitcode: 0
[2025-07-26 21:37:12] 2025-07-27 01:36:39,058 | INFO     | exitmsg: OK
[2025-07-26 21:37:12] 2025-07-27 01:36:39,058 | INFO     | cpuconsumptiontime: 32717 s
[2025-07-26 21:37:12] 2025-07-27 01:36:39,058 | INFO     | nevents: 400
[2025-07-26 21:37:12] 2025-07-27 01:36:39,058 | INFO     | neventsw: 0
[2025-07-26 21:37:12] 2025-07-27 01:36:39,058 | INFO     | pid: 706439
[2025-07-26 21:37:12] 2025-07-27 01:36:39,058 | INFO     | pgrp: 706439
[2025-07-26 21:37:12] 2025-07-27 01:36:39,059 | INFO     | corecount: 8
[2025-07-26 21:37:12] 2025-07-27 01:36:39,059 | INFO     | event service: False
[2025-07-26 21:37:12] 2025-07-27 01:36:39,059 | INFO     | sizes: {0: 2397477, 3: 2397739, 11: 2397767, 4447: 2423908, 4448: 2423907, 4449: 2432963, 4450: 2433147, 4455: 2433341}
[2025-07-26 21:37:12] 2025-07-27 01:36:39,059 | INFO     | --------------------------------------------------
[2025-07-26 21:37:12] 2025-07-27 01:36:39,059 | INFO     | 
[2025-07-26 21:37:12] 2025-07-27 01:36:39,059 | INFO     | executing command: ls -lF /tmp/boinchome/slots/11
[2025-07-26 21:37:12] 2025-07-27 01:36:39,089 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 21:37:12] 2025-07-27 01:36:39,089 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 21:37:12] 2025-07-27 01:36:39,089 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 21:37:12] 2025-07-27 01:36:39,089 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 21:37:12] 2025-07-27 01:36:39,089 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 21:37:12] 2025-07-27 01:36:39,089 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 21:37:12] 2025-07-27 01:36:39,089 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 21:37:12] 2025-07-27 01:36:39,090 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 21:37:12] 2025-07-27 01:36:39,090 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 21:37:12] 2025-07-27 01:36:39,090 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 21:37:12] 2025-07-27 01:36:39,090 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 21:37:12] 2025-07-27 01:36:39,090 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 21:37:12] 2025-07-27 01:36:39,090 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 21:37:12] 2025-07-27 01:36:39,090 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 21:37:12] 2025-07-27 01:36:39,090 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 21:37:12] 2025-07-27 01:36:39,090 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 21:37:12] 2025-07-27 01:36:39,090 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 21:37:12] 2025-07-27 01:36:39,090 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 21:37:12] 2025-07-27 01:36:39,090 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 21:37:12] 2025-07-27 01:36:39,090 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 21:37:12] 2025-07-27 01:36:39,090 | INFO     | job 6745230324 has completed (purged errors)
[2025-07-26 21:37:12] 2025-07-27 01:36:39,090 | INFO     | overall cleanup function is called
[2025-07-26 21:37:12] 2025-07-27 01:36:40,098 | INFO     | --- collectZombieJob: --- 10, [706439]
[2025-07-26 21:37:12] 2025-07-27 01:36:40,098 | INFO     | zombie collector waiting for pid 706439
[2025-07-26 21:37:12] 2025-07-27 01:36:40,099 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 21:37:12] 2025-07-27 01:36:40,099 | INFO     | collected zombie processes
[2025-07-26 21:37:12] 2025-07-27 01:36:40,099 | INFO     | will attempt to kill all subprocesses of pid=706439
[2025-07-26 21:37:12] 2025-07-27 01:36:40,542 | INFO     | process IDs to be killed: [706439] (in reverse order)
[2025-07-26 21:37:12] 2025-07-27 01:36:40,650 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 21:37:12] 2025-07-27 01:36:40,650 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 21:37:12] 2025-07-27 01:36:40,664 | INFO     | did not find any defunct processes belonging to 706439
[2025-07-26 21:37:12] 2025-07-27 01:36:40,679 | INFO     | did not find any defunct processes belonging to 706439
[2025-07-26 21:37:12] 2025-07-27 01:36:40,680 | INFO     | ready for new job
[2025-07-26 21:37:12] 2025-07-27 01:36:40,680 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 21:37:12] 2025-07-27 01:36:40,681 | INFO     | ***************************************
[2025-07-26 21:37:12] 2025-07-27 01:36:40,681 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 21:37:12] 2025-07-27 01:36:40,681 | INFO     | ***************************************
[2025-07-26 21:37:12] 2025-07-27 01:36:40,682 | INFO     | 
[2025-07-26 21:37:12] 2025-07-27 01:36:40,686 | INFO     | architecture information:
[2025-07-26 21:37:12] 2025-07-27 01:36:40,687 | INFO     | executing command: cat /etc/os-release
[2025-07-26 21:37:12] 2025-07-27 01:36:40,714 | INFO     | cat /etc/os-release:
[2025-07-26 21:37:12] NAME="CentOS Linux"
[2025-07-26 21:37:12] VERSION="7 (Core)"
[2025-07-26 21:37:12] ID="centos"
[2025-07-26 21:37:12] ID_LIKE="rhel fedora"
[2025-07-26 21:37:12] VERSION_ID="7"
[2025-07-26 21:37:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 21:37:12] ANSI_COLOR="0;31"
[2025-07-26 21:37:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 21:37:12] HOME_URL="https://www.centos.org/"
[2025-07-26 21:37:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 21:37:12] 
[2025-07-26 21:37:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 21:37:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 21:37:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 21:37:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 21:37:12] 
[2025-07-26 21:37:12] 2025-07-27 01:36:40,714 | INFO     | ***************************************
[2025-07-26 21:37:12] 2025-07-27 01:36:41,217 | INFO     | executing command: df -mP /tmp/boinchome/slots/11
[2025-07-26 21:37:12] 2025-07-27 01:36:41,248 | INFO     | sufficient remaining disk space (124593897472 B)
[2025-07-26 21:37:12] 2025-07-27 01:36:41,251 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 21:37:12] 2025-07-27 01:36:41,251 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 21:37:12] 2025-07-27 01:36:41,253 | INFO     | update_server=False
[2025-07-26 21:37:12] 2025-07-27 01:36:41,253 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 21:37:12] 2025-07-27 01:36:41,254 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 21:37:12] 2025-07-27 01:36:41,415 | INFO     | all data control threads have been joined
[2025-07-26 21:37:12] 2025-07-27 01:36:41,664 | INFO     | all payload control threads have been joined
[2025-07-26 21:37:12] 2025-07-27 01:36:41,859 | INFO     | all job control threads have been joined
[2025-07-26 21:37:12] 2025-07-27 01:36:42,258 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 21:37:12] 2025-07-27 01:36:42,258 | INFO     | aborting loop
[2025-07-26 21:37:12] 2025-07-27 01:36:42,259 | INFO     | [job] retrieve thread has finished
[2025-07-26 21:37:12] 2025-07-27 01:36:42,316 | INFO     | [job] validate thread has finished
[2025-07-26 21:37:12] 2025-07-27 01:36:42,408 | INFO     | [payload] failed_post thread has finished
[2025-07-26 21:37:12] 2025-07-27 01:36:42,420 | INFO     | [data] control thread has finished
[2025-07-26 21:37:12] 2025-07-27 01:36:42,523 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 21:37:12] 2025-07-27 01:36:42,670 | INFO     | [payload] control thread has finished
[2025-07-26 21:37:12] 2025-07-27 01:36:42,865 | INFO     | [job] control thread has finished
[2025-07-26 21:37:12] 2025-07-27 01:36:42,937 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 21:37:12] 2025-07-27 01:36:43,031 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 21:37:12] 2025-07-27 01:36:43,259 | INFO     | [data] copytool_out thread has finished
[2025-07-26 21:37:12] 2025-07-27 01:36:43,263 | INFO     | [job] job monitor thread has finished
[2025-07-26 21:37:12] 2025-07-27 01:36:43,293 | INFO     | [data] copytool_in thread has finished
[2025-07-26 21:37:12] 2025-07-27 01:36:43,634 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 21:37:12] 2025-07-27 01:36:43,821 | INFO     | [payload] validate_post thread has finished
[2025-07-26 21:37:12] 2025-07-27 01:36:44,238 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 21:37:12] 2025-07-27 01:36:44,639 | INFO     | [job] queue monitor thread has finished
[2025-07-26 21:37:12] 2025-07-27 01:36:48,245 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 21:37:12] 2025-07-27 01:36:51,381 | INFO     | job.realtimelogging is not enabled
[2025-07-26 21:37:12] 2025-07-27 01:36:52,387 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 21:37:12] 2025-07-27 01:36:52,795 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139657344022336)>', '<ExcThread(monitor, started 139656557487872)>']
[2025-07-26 21:37:12] 2025-07-27 01:36:57,820 | INFO     | all workflow threads have been joined
[2025-07-26 21:37:12] 2025-07-27 01:36:57,820 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 21:37:12] 2025-07-27 01:36:57,821 | INFO     | traces error code: 0
[2025-07-26 21:37:12] 2025-07-27 01:36:57,822 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 21:37:12] 2025-07-27 01:37:06,922 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-07-26 21:37:12] 2025-07-27 01:37:11,804 | INFO     | PID=675411 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-26 21:37:12] 2025-07-27 01:37:11,804 | INFO     | .. there are 18 such processes running
[2025-07-26 21:37:12] 2025-07-27 01:37:11,805 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 21:37:12] 2025-07-27 01:37:11,805 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 21:37:12] 2025-07-27 01:37:11,805 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 21:37:12] 2025-07-27 01:37:11,805 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 21:37:12] 2025-07-27 01:37:11,805 | INFO     | [monitor] control thread has ended
[2025-07-26 21:37:12] 2025-07-27 01:37:11,950 [wrapper] ==== pilot stdout END ====
[2025-07-26 21:37:12] 2025-07-27 01:37:11,957 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 21:37:12] 2025-07-27 01:37:11,960 [wrapper] pilotpid: 675411
[2025-07-26 21:37:12] 2025-07-27 01:37:11,965 [wrapper] Pilot exit status: 0
[2025-07-26 21:37:12] 2025-07-27 01:37:11,978 [wrapper] pandaids: 6745230324
[2025-07-26 21:37:12] 2025-07-27 01:37:12,071 [wrapper] cleanup supervisor_pilot  887722 675412
[2025-07-26 21:37:12] 2025-07-27 01:37:12,076 [wrapper] Test setup, not cleaning
[2025-07-26 21:37:12] 2025-07-27 01:37:12,080 [wrapper] apfmon messages muted
[2025-07-26 21:37:12] 2025-07-27 01:37:12,085 [wrapper] ==== wrapper stdout END ====
[2025-07-26 21:37:12] 2025-07-27 01:37:12,087 [wrapper] ==== wrapper stderr END ====
[2025-07-26 21:37:12]  *** Error codes and diagnostics ***
[2025-07-26 21:37:12]     "exeErrorCode": 0,
[2025-07-26 21:37:12]     "exeErrorDiag": "",
[2025-07-26 21:37:12]     "pilotErrorCode": 0,
[2025-07-26 21:37:12]     "pilotErrorDiag": "",
[2025-07-26 21:37:12]  *** Listing of results directory ***
[2025-07-26 21:37:12] total 342260
[2025-07-26 21:37:12] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 11:29 pilot3.tar.gz
[2025-07-26 21:37:12] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 11:31 queuedata.json
[2025-07-26 21:37:12] -rwx------. 1 boincer umatlas     36292 Jul 26 11:31 runpilot2-wrapper.sh
[2025-07-26 21:37:12] -rw-r--r--. 1 boincer umatlas       100 Jul 26 20:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 21:37:12] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 20:22 run_atlas
[2025-07-26 21:37:12] -rw-r--r--. 1 boincer umatlas       105 Jul 26 20:22 job.xml
[2025-07-26 21:37:12] -rw-r--r--. 2 boincer umatlas 142455237 Jul 26 20:22 EVNT.45743347._002295.pool.root.1
[2025-07-26 21:37:12] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 20:22 start_atlas.sh
[2025-07-26 21:37:12] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 20:22 shared
[2025-07-26 21:37:12] -rw-r--r--. 2 boincer umatlas    542894 Jul 26 20:22 input.tar.gz
[2025-07-26 21:37:12] -rw-r--r--. 1 boincer umatlas         0 Jul 26 20:22 boinc_lockfile
[2025-07-26 21:37:12] -rw-r--r--. 1 boincer umatlas      2564 Jul 26 20:22 pandaJob.out
[2025-07-26 21:37:12] -rw-------. 1 boincer umatlas    980117 Jul 26 20:22 agis_schedconf.cvmfs.json
[2025-07-26 21:37:12] -rw-------. 1 boincer umatlas   1593052 Jul 26 20:22 agis_ddmendpoints.agis.ALL.json
[2025-07-26 21:37:12] drwx------. 4 boincer umatlas      4096 Jul 26 20:22 pilot3
[2025-07-26 21:37:12] -rw-r--r--. 1 boincer umatlas      6945 Jul 26 21:30 init_data.xml
[2025-07-26 21:37:12] -rw-------. 1 boincer umatlas 202686299 Jul 26 21:36 HITS.45743349._040221.pool.root.1
[2025-07-26 21:37:12] -rw-r--r--. 1 boincer umatlas       529 Jul 26 21:36 boinc_task_state.xml
[2025-07-26 21:37:12] -rw-------. 1 boincer umatlas      1048 Jul 26 21:36 memory_monitor_summary.json
[2025-07-26 21:37:12] -rw-------. 1 boincer umatlas    292410 Jul 26 21:36 log.45743349._040221.job.log.tgz.1
[2025-07-26 21:37:12] -rw-------. 1 boincer umatlas      7756 Jul 26 21:36 heartbeat.json
[2025-07-26 21:37:12] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 21:36 boinc_mmap_file
[2025-07-26 21:37:12] -rw-r--r--. 1 boincer umatlas        27 Jul 26 21:36 wrapper_checkpoint.txt
[2025-07-26 21:37:12] -rw-------. 1 boincer umatlas        95 Jul 26 21:37 pilot_heartbeat.json
[2025-07-26 21:37:12] -rw-------. 1 boincer umatlas       822 Jul 26 21:37 pilotlog.txt
[2025-07-26 21:37:12] -rw-------. 1 boincer umatlas    437845 Jul 26 21:37 log.45743349._040221.job.log.1
[2025-07-26 21:37:12] -rw-------. 1 boincer umatlas       357 Jul 26 21:37 output.list
[2025-07-26 21:37:12] -rw-r--r--. 1 boincer umatlas       620 Jul 26 21:37 runtime_log
[2025-07-26 21:37:12] -rw-------. 1 boincer umatlas    747520 Jul 26 21:37 result.tar.gz
[2025-07-26 21:37:12] -rw-r--r--. 1 boincer umatlas      8669 Jul 26 21:37 runtime_log.err
[2025-07-26 21:37:12] -rw-------. 1 boincer umatlas       650 Jul 26 21:37 dt2KDmS3vz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmATSLDm7JiGnn.diag
[2025-07-26 21:37:12] -rw-r--r--. 1 boincer umatlas     21535 Jul 26 21:37 stderr.txt
[2025-07-26 21:37:12] HITS file was successfully produced:
[2025-07-26 21:37:12] -rw-------. 1 boincer umatlas 202686299 Jul 26 21:36 shared/HITS.pool.root.1
[2025-07-26 21:37:12]  *** Contents of shared directory: ***
[2025-07-26 21:37:12] total 338340
[2025-07-26 21:37:12] -rw-r--r--. 2 boincer umatlas 142455237 Jul 26 20:22 ATLAS.root_0
[2025-07-26 21:37:12] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 20:22 start_atlas.sh
[2025-07-26 21:37:12] -rw-r--r--. 2 boincer umatlas    542894 Jul 26 20:22 input.tar.gz
[2025-07-26 21:37:12] -rw-------. 1 boincer umatlas 202686299 Jul 26 21:36 HITS.pool.root.1
[2025-07-26 21:37:12] -rw-------. 1 boincer umatlas    747520 Jul 26 21:37 result.tar.gz
21:37:13 (662892): run_atlas exited; CPU time 32846.219009
21:37:13 (662892): called boinc_finish(0)

</stderr_txt>
]]>

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