Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:26:55 (2324853): wrapper (7.7.26015): starting
20:26:55 (2324853): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 20:26:55] Arguments: --nthreads 8
[2025-07-26 20:26:55] Threads: 8
[2025-07-26 20:26:55] Checking for CVMFS
[2025-07-26 20:26:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 20:26:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 20:26:56] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 20:26:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 20:26:56] 2.12.6.0 1539006 17641 337396 148794 2 468 32358676 32935936 20656 16776704 1 53826935 99.711 80541102 20108 http://cvmfs-s1.hpc.swin.edu.au:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 20:26:56] CVMFS is ok
[2025-07-26 20:26:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 20:26:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 20:26:56] Further information can be found at the LHC@home message board.
[2025-07-26 20:26:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 20:26:56] Checking for apptainer binary...
[2025-07-26 20:26:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 20:26:56] Running /usr/bin/apptainer --version
[2025-07-26 20:26:56] apptainer version 1.4.1-1.el9
[2025-07-26 20:26:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 20:26:57] c6-12-29-4.aglt2.org
[2025-07-26 20:26:57] apptainer works
[2025-07-26 20:26:57] Set ATHENA_PROC_NUMBER=8
[2025-07-26 20:26:57] Set ATHENA_CORE_NUMBER=8
[2025-07-26 20:26:57] Starting ATLAS job with PandaID=6745354952
[2025-07-26 20:26:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 23:56:51]  *** The last 200 lines of the pilot log: ***
[2025-07-26 23:56:51] 2025-07-27 03:56:15,955 | INFO     | monitor loop #763: job 0:6745354952 is in state 'finished'
[2025-07-26 23:56:51] 2025-07-27 03:56:15,955 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 23:56:51] 2025-07-27 03:56:17,821 | INFO     | PID=2329099 has CPU usage=13.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-26 23:56:51] 2025-07-27 03:56:17,822 | INFO     | .. there are 22 such processes running
[2025-07-26 23:56:51] 2025-07-27 03:56:18,134 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 23:56:51] 2025-07-27 03:56:18,150 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2439.1049895833326
[2025-07-26 23:56:51] 2025-07-27 03:56:18,170 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6745354952/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 23:56:51] 2025-07-27 03:56:18,171 | INFO     | extracted standard info from prmon json
[2025-07-26 23:56:51] 2025-07-27 03:56:18,171 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 23:56:51] 2025-07-27 03:56:18,171 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 23:56:51] 2025-07-27 03:56:18,172 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 23:56:51] 2025-07-27 03:56:18,172 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 23:56:51] 2025-07-27 03:56:18,176 | INFO     | fitting pss+swap vs Time
[2025-07-26 23:56:51] 2025-07-27 03:56:18,177 | INFO     | sum of square deviations: 2632476454.7451043
[2025-07-26 23:56:51] 2025-07-27 03:56:18,178 | INFO     | sum of deviations: -21530199828.647053
[2025-07-26 23:56:51] 2025-07-27 03:56:18,179 | INFO     | mean x: 1753582345.745098
[2025-07-26 23:56:51] 2025-07-27 03:56:18,179 | INFO     | mean y: 2186001.6029411764
[2025-07-26 23:56:51] 2025-07-27 03:56:18,179 | INFO     | -- intersect: 14344186383.724241
[2025-07-26 23:56:51] 2025-07-27 03:56:18,179 | INFO     | intersect: 14344186383.724241
[2025-07-26 23:56:51] 2025-07-27 03:56:18,179 | INFO     | chi2: 3.0791937515378414
[2025-07-26 23:56:51] 2025-07-27 03:56:18,180 | INFO     | sum of square deviations: 2443632349.4371824
[2025-07-26 23:56:51] 2025-07-27 03:56:18,181 | INFO     | sum of deviations: -7616544708.025131
[2025-07-26 23:56:51] 2025-07-27 03:56:18,181 | INFO     | mean x: 1753582193.2512562
[2025-07-26 23:56:51] 2025-07-27 03:56:18,181 | INFO     | mean y: 2197053.1005025124
[2025-07-26 23:56:51] 2025-07-27 03:56:18,182 | INFO     | -- intersect: 5467928089.59262
[2025-07-26 23:56:51] 2025-07-27 03:56:18,182 | INFO     | intersect: 5467928089.59262
[2025-07-26 23:56:51] 2025-07-27 03:56:18,182 | INFO     | chi2: 2.318510712967892
[2025-07-26 23:56:51] 2025-07-27 03:56:18,182 | INFO     | current chi2=2.318510712967892 (change=24.70396798480256 %)
[2025-07-26 23:56:51] 2025-07-27 03:56:18,182 | INFO     | right removable region: 198
[2025-07-26 23:56:51] 2025-07-27 03:56:18,183 | INFO     | sum of square deviations: 2443601849.4371824
[2025-07-26 23:56:51] 2025-07-27 03:56:18,184 | INFO     | sum of deviations: -56539463553.422104
[2025-07-26 23:56:51] 2025-07-27 03:56:18,184 | INFO     | mean x: 1753582498.2512562
[2025-07-26 23:56:51] 2025-07-27 03:56:18,184 | INFO     | mean y: 2214080.688442211
[2025-07-26 23:56:51] 2025-07-27 03:56:18,184 | INFO     | -- intersect: 40576178194.61785
[2025-07-26 23:56:51] 2025-07-27 03:56:18,184 | INFO     | intersect: 40576178194.61785
[2025-07-26 23:56:51] 2025-07-27 03:56:18,185 | INFO     | chi2: 1.2289462332872763
[2025-07-26 23:56:51] 2025-07-27 03:56:18,185 | INFO     | current chi2=1.2289462332872763 (change=60.088700729744474 %)
[2025-07-26 23:56:51] 2025-07-27 03:56:18,185 | INFO     | sum of square deviations: 2263995370.123716
[2025-07-26 23:56:51] 2025-07-27 03:56:18,187 | INFO     | sum of deviations: -62180544477.55666
[2025-07-26 23:56:51] 2025-07-27 03:56:18,187 | INFO     | mean x: 1753582650.7525773
[2025-07-26 23:56:51] 2025-07-27 03:56:18,187 | INFO     | mean y: 2218819.1134020616
[2025-07-26 23:56:51] 2025-07-27 03:56:18,187 | INFO     | -- intersect: 48164297880.35898
[2025-07-26 23:56:51] 2025-07-27 03:56:18,187 | INFO     | intersect: 48164297880.35898
[2025-07-26 23:56:51] 2025-07-27 03:56:18,188 | INFO     | chi2: 1.1145210357246738
[2025-07-26 23:56:51] 2025-07-27 03:56:18,188 | INFO     | current chi2=1.1145210357246738 (change=9.310838380335772 %)
[2025-07-26 23:56:51] 2025-07-27 03:56:18,188 | INFO     | left removable region: 20
[2025-07-26 23:56:51] 2025-07-27 03:56:18,188 | INFO     | sum of square deviations: 1748779302.6123607
[2025-07-26 23:56:51] 2025-07-27 03:56:18,190 | INFO     | sum of deviations: -36287756479.4382
[2025-07-26 23:56:51] 2025-07-27 03:56:18,190 | INFO     | mean x: 1753582772.758427
[2025-07-26 23:56:51] 2025-07-27 03:56:18,190 | INFO     | mean y: 2220340.2921348317
[2025-07-26 23:56:51] 2025-07-27 03:56:18,190 | INFO     | -- intersect: 36389650434.72356
[2025-07-26 23:56:51] 2025-07-27 03:56:18,190 | INFO     | intersect: 36389650434.72356
[2025-07-26 23:56:51] 2025-07-27 03:56:18,190 | INFO     | chi2: 0.29916593959410565
[2025-07-26 23:56:51] 2025-07-27 03:56:18,191 | INFO     | -- intersect: 36389650434.72356
[2025-07-26 23:56:51] 2025-07-27 03:56:18,191 | INFO     | current memory leak: -20.75 B/s (using 178 data points, chi2=0.30)
[2025-07-26 23:56:51] 2025-07-27 03:56:18,191 | INFO     | could have reported an average CPU frequency of 2453 MHz (10 samples)
[2025-07-26 23:56:51] 2025-07-27 03:56:18,192 | INFO     | ..............................
[2025-07-26 23:56:51] 2025-07-27 03:56:18,192 | INFO     | . Timing measurements:
[2025-07-26 23:56:51] 2025-07-27 03:56:18,192 | INFO     | . get job = 0 s
[2025-07-26 23:56:51] 2025-07-27 03:56:18,192 | INFO     | . initial setup = 3 s
[2025-07-26 23:56:51] 2025-07-27 03:56:18,192 | INFO     | . payload setup = 19 s
[2025-07-26 23:56:51] 2025-07-27 03:56:18,192 | INFO     | . stage-in = 0 s
[2025-07-26 23:56:51] 2025-07-27 03:56:18,192 | INFO     | . payload execution = 12425 s
[2025-07-26 23:56:51] 2025-07-27 03:56:18,192 | INFO     | . stage-out = 2 s
[2025-07-26 23:56:51] 2025-07-27 03:56:18,192 | INFO     | . log creation = 0 s
[2025-07-26 23:56:51] 2025-07-27 03:56:18,192 | INFO     | ..............................
[2025-07-26 23:56:51] 2025-07-27 03:56:18,359 | INFO     | 
[2025-07-26 23:56:51] 2025-07-27 03:56:18,359 | INFO     | job summary report
[2025-07-26 23:56:51] 2025-07-27 03:56:18,359 | INFO     | --------------------------------------------------
[2025-07-26 23:56:51] 2025-07-27 03:56:18,359 | INFO     | PanDA job id: 6745354952
[2025-07-26 23:56:51] 2025-07-27 03:56:18,359 | INFO     | task id: 45743349
[2025-07-26 23:56:51] 2025-07-27 03:56:18,359 | INFO     | errors: (none)
[2025-07-26 23:56:51] 2025-07-27 03:56:18,360 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 23:56:51] 2025-07-27 03:56:18,360 | INFO     | pilot state: finished 
[2025-07-26 23:56:51] 2025-07-27 03:56:18,360 | INFO     | transexitcode: 0
[2025-07-26 23:56:51] 2025-07-27 03:56:18,360 | INFO     | exeerrorcode: 0
[2025-07-26 23:56:51] 2025-07-27 03:56:18,360 | INFO     | exeerrordiag: 
[2025-07-26 23:56:51] 2025-07-27 03:56:18,360 | INFO     | exitcode: 0
[2025-07-26 23:56:51] 2025-07-27 03:56:18,360 | INFO     | exitmsg: OK
[2025-07-26 23:56:51] 2025-07-27 03:56:18,360 | INFO     | cpuconsumptiontime: 57550 s
[2025-07-26 23:56:51] 2025-07-27 03:56:18,360 | INFO     | nevents: 400
[2025-07-26 23:56:51] 2025-07-27 03:56:18,360 | INFO     | neventsw: 0
[2025-07-26 23:56:51] 2025-07-27 03:56:18,360 | INFO     | pid: 2336127
[2025-07-26 23:56:51] 2025-07-27 03:56:18,360 | INFO     | pgrp: 2336127
[2025-07-26 23:56:51] 2025-07-27 03:56:18,361 | INFO     | corecount: 8
[2025-07-26 23:56:51] 2025-07-27 03:56:18,361 | INFO     | event service: False
[2025-07-26 23:56:51] 2025-07-27 03:56:18,361 | INFO     | sizes: {0: 2396641, 1: 2397326, 2: 2397525, 13: 2397525, 16: 2397843, 24: 2397871, 12449: 2427732, 12450: 2427731, 12454: 2436841, 12467: 2436979}
[2025-07-26 23:56:51] 2025-07-27 03:56:18,361 | INFO     | --------------------------------------------------
[2025-07-26 23:56:51] 2025-07-27 03:56:18,361 | INFO     | 
[2025-07-26 23:56:51] 2025-07-27 03:56:18,361 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-26 23:56:51] 2025-07-27 03:56:18,398 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 23:56:51] 2025-07-27 03:56:18,399 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 23:56:51] 2025-07-27 03:56:18,399 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 23:56:51] 2025-07-27 03:56:18,399 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 23:56:51] 2025-07-27 03:56:18,399 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 23:56:51] 2025-07-27 03:56:18,400 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 23:56:51] 2025-07-27 03:56:18,400 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 23:56:51] 2025-07-27 03:56:18,400 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 23:56:51] 2025-07-27 03:56:18,400 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 23:56:51] 2025-07-27 03:56:18,400 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 23:56:51] 2025-07-27 03:56:18,400 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 23:56:51] 2025-07-27 03:56:18,400 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 23:56:51] 2025-07-27 03:56:18,400 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 23:56:51] 2025-07-27 03:56:18,400 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 23:56:51] 2025-07-27 03:56:18,401 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 23:56:51] 2025-07-27 03:56:18,401 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 23:56:51] 2025-07-27 03:56:18,401 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 23:56:51] 2025-07-27 03:56:18,401 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 23:56:51] 2025-07-27 03:56:18,401 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 23:56:51] 2025-07-27 03:56:18,401 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 23:56:51] 2025-07-27 03:56:18,401 | INFO     | job 6745354952 has completed (purged errors)
[2025-07-26 23:56:51] 2025-07-27 03:56:18,402 | INFO     | overall cleanup function is called
[2025-07-26 23:56:51] 2025-07-27 03:56:19,416 | INFO     | --- collectZombieJob: --- 10, [2336127]
[2025-07-26 23:56:51] 2025-07-27 03:56:19,416 | INFO     | zombie collector waiting for pid 2336127
[2025-07-26 23:56:51] 2025-07-27 03:56:19,416 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 23:56:51] 2025-07-27 03:56:19,416 | INFO     | collected zombie processes
[2025-07-26 23:56:51] 2025-07-27 03:56:19,416 | INFO     | will attempt to kill all subprocesses of pid=2336127
[2025-07-26 23:56:51] 2025-07-27 03:56:20,494 | INFO     | process IDs to be killed: [2336127] (in reverse order)
[2025-07-26 23:56:51] 2025-07-27 03:56:20,636 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 23:56:51] 2025-07-27 03:56:20,636 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 23:56:51] 2025-07-27 03:56:20,656 | INFO     | did not find any defunct processes belonging to 2336127
[2025-07-26 23:56:51] 2025-07-27 03:56:20,675 | INFO     | did not find any defunct processes belonging to 2336127
[2025-07-26 23:56:51] 2025-07-27 03:56:20,675 | INFO     | ready for new job
[2025-07-26 23:56:51] 2025-07-27 03:56:20,676 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 23:56:51] 2025-07-27 03:56:20,678 | INFO     | ***************************************
[2025-07-26 23:56:51] 2025-07-27 03:56:20,678 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 23:56:51] 2025-07-27 03:56:20,678 | INFO     | ***************************************
[2025-07-26 23:56:51] 2025-07-27 03:56:20,678 | INFO     | 
[2025-07-26 23:56:51] 2025-07-27 03:56:20,707 | INFO     | architecture information:
[2025-07-26 23:56:51] 2025-07-27 03:56:20,715 | INFO     | executing command: cat /etc/os-release
[2025-07-26 23:56:51] 2025-07-27 03:56:20,742 | INFO     | cat /etc/os-release:
[2025-07-26 23:56:51] NAME="CentOS Linux"
[2025-07-26 23:56:51] VERSION="7 (Core)"
[2025-07-26 23:56:51] ID="centos"
[2025-07-26 23:56:51] ID_LIKE="rhel fedora"
[2025-07-26 23:56:51] VERSION_ID="7"
[2025-07-26 23:56:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 23:56:51] ANSI_COLOR="0;31"
[2025-07-26 23:56:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 23:56:51] HOME_URL="https://www.centos.org/"
[2025-07-26 23:56:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 23:56:51] 
[2025-07-26 23:56:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 23:56:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 23:56:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 23:56:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 23:56:51] 
[2025-07-26 23:56:51] 2025-07-27 03:56:20,743 | INFO     | ***************************************
[2025-07-26 23:56:51] 2025-07-27 03:56:21,247 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-26 23:56:51] 2025-07-27 03:56:21,334 | INFO     | sufficient remaining disk space (95743377408 B)
[2025-07-26 23:56:51] 2025-07-27 03:56:21,335 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 23:56:51] 2025-07-27 03:56:21,335 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 23:56:51] 2025-07-27 03:56:21,335 | INFO     | update_server=False
[2025-07-26 23:56:51] 2025-07-27 03:56:21,336 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 23:56:51] 2025-07-27 03:56:21,337 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 23:56:51] 2025-07-27 03:56:21,381 | INFO     | all data control threads have been joined
[2025-07-26 23:56:51] 2025-07-27 03:56:21,975 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:56:51] 2025-07-27 03:56:21,975 | INFO     | aborting loop
[2025-07-26 23:56:51] 2025-07-27 03:56:22,101 | INFO     | all payload control threads have been joined
[2025-07-26 23:56:51] 2025-07-27 03:56:22,342 | INFO     | [job] retrieve thread has finished
[2025-07-26 23:56:51] 2025-07-27 03:56:22,387 | INFO     | [data] control thread has finished
[2025-07-26 23:56:51] 2025-07-27 03:56:22,552 | INFO     | all job control threads have been joined
[2025-07-26 23:56:51] 2025-07-27 03:56:22,785 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 23:56:51] 2025-07-27 03:56:22,812 | INFO     | [payload] failed_post thread has finished
[2025-07-26 23:56:51] 2025-07-27 03:56:22,981 | INFO     | [job] job monitor thread has finished
[2025-07-26 23:56:51] 2025-07-27 03:56:23,107 | INFO     | [payload] control thread has finished
[2025-07-26 23:56:51] 2025-07-27 03:56:23,108 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 23:56:51] 2025-07-27 03:56:23,225 | INFO     | [data] copytool_in thread has finished
[2025-07-26 23:56:51] 2025-07-27 03:56:23,236 | INFO     | [job] validate thread has finished
[2025-07-26 23:56:51] 2025-07-27 03:56:23,344 | INFO     | [data] copytool_out thread has finished
[2025-07-26 23:56:51] 2025-07-27 03:56:23,350 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:56:51] 2025-07-27 03:56:23,404 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 23:56:51] 2025-07-27 03:56:23,422 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 23:56:51] 2025-07-27 03:56:23,558 | INFO     | [job] control thread has finished
[2025-07-26 23:56:51] 2025-07-27 03:56:23,918 | INFO     | [payload] validate_post thread has finished
[2025-07-26 23:56:51] 2025-07-27 03:56:24,367 | INFO     | [job] queue monitor thread has finished
[2025-07-26 23:56:51] 2025-07-27 03:56:24,573 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 23:56:51] 2025-07-27 03:56:28,582 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 23:56:51] 2025-07-27 03:56:29,850 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140285735814976)>', '<ExcThread(monitor, started 140285090715392)>']
[2025-07-26 23:56:51] 2025-07-27 03:56:34,876 | INFO     | all workflow threads have been joined
[2025-07-26 23:56:51] 2025-07-27 03:56:34,876 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 23:56:51] 2025-07-27 03:56:34,876 | INFO     | traces error code: 0
[2025-07-26 23:56:51] 2025-07-27 03:56:34,877 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 23:56:51] 2025-07-27 03:56:50,578 | INFO     | PID=2329099 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 23:56:51] 2025-07-27 03:56:50,578 | INFO     | .. there are 22 such processes running
[2025-07-26 23:56:51] 2025-07-27 03:56:50,579 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 23:56:51] 2025-07-27 03:56:50,579 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 23:56:51] 2025-07-27 03:56:50,579 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 23:56:51] 2025-07-27 03:56:50,579 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 23:56:51] 2025-07-27 03:56:50,579 | INFO     | [monitor] control thread has ended
[2025-07-26 23:56:51] 2025-07-27 03:56:50,989 [wrapper] ==== pilot stdout END ====
[2025-07-26 23:56:51] 2025-07-27 03:56:50,993 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 23:56:51] 2025-07-27 03:56:50,997 [wrapper] pilotpid: 2329099
[2025-07-26 23:56:51] 2025-07-27 03:56:51,001 [wrapper] Pilot exit status: 0
[2025-07-26 23:56:51] 2025-07-27 03:56:51,088 [wrapper] pandaids: 6745354952
[2025-07-26 23:56:51] 2025-07-27 03:56:51,186 [wrapper] cleanup supervisor_pilot 2709937 2329100
[2025-07-26 23:56:51] 2025-07-27 03:56:51,191 [wrapper] Test setup, not cleaning
[2025-07-26 23:56:51] 2025-07-27 03:56:51,195 [wrapper] apfmon messages muted
[2025-07-26 23:56:51] 2025-07-27 03:56:51,199 [wrapper] ==== wrapper stdout END ====
[2025-07-26 23:56:51] 2025-07-27 03:56:51,203 [wrapper] ==== wrapper stderr END ====
[2025-07-26 23:56:51]  *** Error codes and diagnostics ***
[2025-07-26 23:56:51]     "exeErrorCode": 0,
[2025-07-26 23:56:51]     "exeErrorDiag": "",
[2025-07-26 23:56:51]     "pilotErrorCode": 0,
[2025-07-26 23:56:51]     "pilotErrorDiag": "",
[2025-07-26 23:56:51]  *** Listing of results directory ***
[2025-07-26 23:56:51] total 352776
[2025-07-26 23:56:51] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 14:40 pilot3.tar.gz
[2025-07-26 23:56:51] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 15:15 queuedata.json
[2025-07-26 23:56:51] -rwx------. 1 boincer umatlas     36292 Jul 26 15:16 runpilot2-wrapper.sh
[2025-07-26 23:56:51] -rw-r--r--. 1 boincer umatlas       100 Jul 26 20:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 23:56:51] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 20:26 run_atlas
[2025-07-26 23:56:51] -rw-r--r--. 1 boincer umatlas       105 Jul 26 20:26 job.xml
[2025-07-26 23:56:51] -rw-r--r--. 2 boincer umatlas 146546137 Jul 26 20:26 EVNT.45743347._002436.pool.root.1
[2025-07-26 23:56:51] -rw-r--r--. 2 boincer umatlas    542881 Jul 26 20:26 input.tar.gz
[2025-07-26 23:56:51] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 20:26 start_atlas.sh
[2025-07-26 23:56:51] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 20:26 shared
[2025-07-26 23:56:51] -rw-r--r--. 1 boincer umatlas         0 Jul 26 20:26 boinc_lockfile
[2025-07-26 23:56:51] -rw-r--r--. 1 boincer umatlas      2560 Jul 26 20:26 pandaJob.out
[2025-07-26 23:56:51] -rw-------. 1 boincer umatlas    980117 Jul 26 20:27 agis_schedconf.cvmfs.json
[2025-07-26 23:56:51] drwx------. 4 boincer umatlas      4096 Jul 26 20:27 pilot3
[2025-07-26 23:56:51] -rw-r--r--. 1 boincer umatlas      6860 Jul 26 23:49 init_data.xml
[2025-07-26 23:56:51] -rw-r--r--. 1 boincer umatlas       531 Jul 26 23:55 boinc_task_state.xml
[2025-07-26 23:56:51] -rw-------. 1 boincer umatlas 208054490 Jul 26 23:55 HITS.45743349._043071.pool.root.1
[2025-07-26 23:56:51] -rw-------. 1 boincer umatlas      1040 Jul 26 23:55 memory_monitor_summary.json
[2025-07-26 23:56:51] -rw-------. 1 boincer umatlas        95 Jul 26 23:55 pilot_heartbeat.json
[2025-07-26 23:56:51] -rw-------. 1 boincer umatlas   1593052 Jul 26 23:56 agis_ddmendpoints.agis.ALL.json
[2025-07-26 23:56:51] -rw-------. 1 boincer umatlas    360481 Jul 26 23:56 log.45743349._043071.job.log.tgz.1
[2025-07-26 23:56:51] -rw-------. 1 boincer umatlas      7831 Jul 26 23:56 heartbeat.json
[2025-07-26 23:56:51] -rw-r--r--. 1 boincer umatlas        28 Jul 26 23:56 wrapper_checkpoint.txt
[2025-07-26 23:56:51] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 23:56 boinc_mmap_file
[2025-07-26 23:56:51] -rw-------. 1 boincer umatlas       823 Jul 26 23:56 pilotlog.txt
[2025-07-26 23:56:51] -rw-------. 1 boincer umatlas   1021771 Jul 26 23:56 log.45743349._043071.job.log.1
[2025-07-26 23:56:51] -rw-------. 1 boincer umatlas       357 Jul 26 23:56 output.list
[2025-07-26 23:56:51] -rw-r--r--. 1 boincer umatlas       620 Jul 26 23:56 runtime_log
[2025-07-26 23:56:51] -rw-------. 1 boincer umatlas   1402880 Jul 26 23:56 result.tar.gz
[2025-07-26 23:56:51] -rw-r--r--. 1 boincer umatlas      8671 Jul 26 23:56 runtime_log.err
[2025-07-26 23:56:51] -rw-------. 1 boincer umatlas       657 Jul 26 23:56 DkNMDmQYzz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmAvSLDm2jtInn.diag
[2025-07-26 23:56:51] -rw-r--r--. 1 boincer umatlas     21332 Jul 26 23:56 stderr.txt
[2025-07-26 23:56:51] HITS file was successfully produced:
[2025-07-26 23:56:51] -rw-------. 1 boincer umatlas 208054490 Jul 26 23:55 shared/HITS.pool.root.1
[2025-07-26 23:56:51]  *** Contents of shared directory: ***
[2025-07-26 23:56:51] total 348216
[2025-07-26 23:56:51] -rw-r--r--. 2 boincer umatlas 146546137 Jul 26 20:26 ATLAS.root_0
[2025-07-26 23:56:51] -rw-r--r--. 2 boincer umatlas    542881 Jul 26 20:26 input.tar.gz
[2025-07-26 23:56:51] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 20:26 start_atlas.sh
[2025-07-26 23:56:51] -rw-------. 1 boincer umatlas 208054490 Jul 26 23:55 HITS.pool.root.1
[2025-07-26 23:56:51] -rw-------. 1 boincer umatlas   1402880 Jul 26 23:56 result.tar.gz
23:56:52 (2324853): run_atlas exited; CPU time 58119.185988
23:56:52 (2324853): called boinc_finish(0)

</stderr_txt>
]]>

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