Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:09:47 (2678593): wrapper (7.7.26015): starting
20:09:47 (2678593): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 20:09:47] Arguments: --nthreads 8
[2025-07-26 20:09:47] Threads: 8
[2025-07-26 20:09:47] Checking for CVMFS
[2025-07-26 20:09:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 20:09:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 20:09:47] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 20:09:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 20:09:47] 2.13.0.0 2367554 17642 283264 148793 3 620 23966645 32935936 20898 16776704 1 116180387 99.604 143188300 17327 http://cvmfs-s1.hpc.swin.edu.au:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 20:09:47] CVMFS is ok
[2025-07-26 20:09:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 20:09:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 20:09:47] Further information can be found at the LHC@home message board.
[2025-07-26 20:09:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 20:09:47] Checking for apptainer binary...
[2025-07-26 20:09:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 20:09:47] Running /usr/bin/apptainer --version
[2025-07-26 20:09:47] apptainer version 1.4.1-1.el9
[2025-07-26 20:09:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 20:09:47] c7-2-15.aglt2.org
[2025-07-26 20:09:47] apptainer works
[2025-07-26 20:09:47] Set ATHENA_PROC_NUMBER=8
[2025-07-26 20:09:47] Set ATHENA_CORE_NUMBER=8
[2025-07-26 20:09:48] Starting ATLAS job with PandaID=6745354762
[2025-07-26 20:09:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 22:59:11]  *** The last 200 lines of the pilot log: ***
[2025-07-26 22:59:11] 2025-07-27 02:58:35,112 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 22:59:11] 2025-07-27 02:58:37,619 | INFO     | monitor loop #717: job 0:6745354762 is in state 'finished'
[2025-07-26 22:59:11] 2025-07-27 02:58:37,619 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 22:59:11] 2025-07-27 02:58:38,631 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 22:59:11] 2025-07-27 02:58:38,657 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2928.851229166668
[2025-07-26 22:59:11] 2025-07-27 02:58:38,688 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6745354762/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 22:59:11] 2025-07-27 02:58:38,690 | INFO     | extracted standard info from prmon json
[2025-07-26 22:59:11] 2025-07-27 02:58:38,690 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 22:59:11] 2025-07-27 02:58:38,690 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 22:59:11] 2025-07-27 02:58:38,691 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 22:59:11] 2025-07-27 02:58:38,691 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 22:59:11] 2025-07-27 02:58:38,696 | INFO     | fitting pss+swap vs Time
[2025-07-26 22:59:11] 2025-07-27 02:58:38,696 | INFO     | sum of square deviations: 1392868634.9454548
[2025-07-26 22:59:11] 2025-07-27 02:58:38,697 | INFO     | sum of deviations: 19059391684.41816
[2025-07-26 22:59:11] 2025-07-27 02:58:38,697 | INFO     | mean x: 1753580094.0181818
[2025-07-26 22:59:11] 2025-07-27 02:58:38,697 | INFO     | mean y: 2168928.193939394
[2025-07-26 22:59:11] 2025-07-27 02:58:38,697 | INFO     | -- intersect: -23993037097.24734
[2025-07-26 22:59:11] 2025-07-27 02:58:38,697 | INFO     | intersect: -23993037097.24734
[2025-07-26 22:59:11] 2025-07-27 02:58:38,697 | INFO     | chi2: 3.013504714016803
[2025-07-26 22:59:11] 2025-07-27 02:58:38,697 | INFO     | sum of square deviations: 1270039339.9437492
[2025-07-26 22:59:11] 2025-07-27 02:58:38,698 | INFO     | sum of deviations: 28227604493.999992
[2025-07-26 22:59:11] 2025-07-27 02:58:38,698 | INFO     | mean x: 1753579941.51875
[2025-07-26 22:59:11] 2025-07-27 02:58:38,698 | INFO     | mean y: 2180017.0
[2025-07-26 22:59:11] 2025-07-27 02:58:38,698 | INFO     | -- intersect: -38972487523.60962
[2025-07-26 22:59:11] 2025-07-27 02:58:38,699 | INFO     | intersect: -38972487523.60962
[2025-07-26 22:59:11] 2025-07-27 02:58:38,700 | INFO     | chi2: 2.2634955540083266
[2025-07-26 22:59:11] 2025-07-27 02:58:38,700 | INFO     | current chi2=2.2634955540083266 (change=24.88826901514164 %)
[2025-07-26 22:59:11] 2025-07-27 02:58:38,700 | INFO     | right removable region: 159
[2025-07-26 22:59:11] 2025-07-27 02:58:38,700 | INFO     | sum of square deviations: 1270037509.9437492
[2025-07-26 22:59:11] 2025-07-27 02:58:38,701 | INFO     | sum of deviations: -12546207102.81875
[2025-07-26 22:59:11] 2025-07-27 02:58:38,701 | INFO     | mean x: 1753580246.51875
[2025-07-26 22:59:11] 2025-07-27 02:58:38,701 | INFO     | mean y: 2207862.10625
[2025-07-26 22:59:11] 2025-07-27 02:58:38,701 | INFO     | -- intersect: 17325145784.790615
[2025-07-26 22:59:11] 2025-07-27 02:58:38,701 | INFO     | intersect: 17325145784.790615
[2025-07-26 22:59:11] 2025-07-27 02:58:38,701 | INFO     | chi2: 0.8767720788118274
[2025-07-26 22:59:11] 2025-07-27 02:58:38,702 | INFO     | current chi2=0.8767720788118274 (change=70.90523619446581 %)
[2025-07-26 22:59:11] 2025-07-27 02:58:38,702 | INFO     | sum of square deviations: 1154648384.9419298
[2025-07-26 22:59:11] 2025-07-27 02:58:38,702 | INFO     | sum of deviations: -15803748471.219357
[2025-07-26 22:59:11] 2025-07-27 02:58:38,703 | INFO     | mean x: 1753580399.0193548
[2025-07-26 22:59:11] 2025-07-27 02:58:38,703 | INFO     | mean y: 2212132.4064516127
[2025-07-26 22:59:11] 2025-07-27 02:58:38,703 | INFO     | -- intersect: 24003582516.30572
[2025-07-26 22:59:11] 2025-07-27 02:58:38,703 | INFO     | intersect: 24003582516.30572
[2025-07-26 22:59:11] 2025-07-27 02:58:38,703 | INFO     | chi2: 0.8433174050683534
[2025-07-26 22:59:11] 2025-07-27 02:58:38,703 | INFO     | current chi2=0.8433174050683534 (change=3.8156636772478736 %)
[2025-07-26 22:59:11] 2025-07-27 02:58:38,703 | INFO     | left removable region: 20
[2025-07-26 22:59:11] 2025-07-27 02:58:38,703 | INFO     | sum of square deviations: 832706732.9352521
[2025-07-26 22:59:11] 2025-07-27 02:58:38,704 | INFO     | sum of deviations: -7054619852.712226
[2025-07-26 22:59:11] 2025-07-27 02:58:38,704 | INFO     | mean x: 1753580521.0215828
[2025-07-26 22:59:11] 2025-07-27 02:58:38,704 | INFO     | mean y: 2226345.237410072
[2025-07-26 22:59:11] 2025-07-27 02:58:38,704 | INFO     | -- intersect: 14858409762.082933
[2025-07-26 22:59:11] 2025-07-27 02:58:38,704 | INFO     | intersect: 14858409762.082933
[2025-07-26 22:59:11] 2025-07-27 02:58:38,705 | INFO     | chi2: 0.051303107185329405
[2025-07-26 22:59:11] 2025-07-27 02:58:38,705 | INFO     | -- intersect: 14858409762.082933
[2025-07-26 22:59:11] 2025-07-27 02:58:38,705 | INFO     | current memory leak: -8.47 B/s (using 139 data points, chi2=0.05)
[2025-07-26 22:59:11] 2025-07-27 02:58:38,705 | INFO     | could have reported an average CPU frequency of 2972 MHz (9 samples)
[2025-07-26 22:59:11] 2025-07-27 02:58:38,705 | INFO     | ..............................
[2025-07-26 22:59:11] 2025-07-27 02:58:38,706 | INFO     | . Timing measurements:
[2025-07-26 22:59:11] 2025-07-27 02:58:38,706 | INFO     | . get job = 0 s
[2025-07-26 22:59:11] 2025-07-27 02:58:38,706 | INFO     | . initial setup = 4 s
[2025-07-26 22:59:11] 2025-07-27 02:58:38,706 | INFO     | . payload setup = 27 s
[2025-07-26 22:59:11] 2025-07-27 02:58:38,706 | INFO     | . stage-in = 0 s
[2025-07-26 22:59:11] 2025-07-27 02:58:38,706 | INFO     | . payload execution = 10023 s
[2025-07-26 22:59:11] 2025-07-27 02:58:38,706 | INFO     | . stage-out = 0 s
[2025-07-26 22:59:11] 2025-07-27 02:58:38,706 | INFO     | . log creation = 0 s
[2025-07-26 22:59:11] 2025-07-27 02:58:38,706 | INFO     | ..............................
[2025-07-26 22:59:11] 2025-07-27 02:58:38,774 | INFO     | 
[2025-07-26 22:59:11] 2025-07-27 02:58:38,774 | INFO     | job summary report
[2025-07-26 22:59:11] 2025-07-27 02:58:38,774 | INFO     | --------------------------------------------------
[2025-07-26 22:59:11] 2025-07-27 02:58:38,774 | INFO     | PanDA job id: 6745354762
[2025-07-26 22:59:11] 2025-07-27 02:58:38,774 | INFO     | task id: 45743349
[2025-07-26 22:59:11] 2025-07-27 02:58:38,774 | INFO     | errors: (none)
[2025-07-26 22:59:11] 2025-07-27 02:58:38,774 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 22:59:11] 2025-07-27 02:58:38,774 | INFO     | pilot state: finished 
[2025-07-26 22:59:11] 2025-07-27 02:58:38,774 | INFO     | transexitcode: 0
[2025-07-26 22:59:11] 2025-07-27 02:58:38,774 | INFO     | exeerrorcode: 0
[2025-07-26 22:59:11] 2025-07-27 02:58:38,775 | INFO     | exeerrordiag: 
[2025-07-26 22:59:11] 2025-07-27 02:58:38,775 | INFO     | exitcode: 0
[2025-07-26 22:59:11] 2025-07-27 02:58:38,775 | INFO     | exitmsg: OK
[2025-07-26 22:59:11] 2025-07-27 02:58:38,775 | INFO     | cpuconsumptiontime: 41200 s
[2025-07-26 22:59:11] 2025-07-27 02:58:38,775 | INFO     | nevents: 400
[2025-07-26 22:59:11] 2025-07-27 02:58:38,775 | INFO     | neventsw: 0
[2025-07-26 22:59:11] 2025-07-27 02:58:38,775 | INFO     | pid: 2690540
[2025-07-26 22:59:11] 2025-07-27 02:58:38,775 | INFO     | pgrp: 2690540
[2025-07-26 22:59:11] 2025-07-27 02:58:38,775 | INFO     | corecount: 8
[2025-07-26 22:59:11] 2025-07-27 02:58:38,775 | INFO     | event service: False
[2025-07-26 22:59:11] 2025-07-27 02:58:38,775 | INFO     | sizes: {0: 2397302, 1: 2397501, 2: 2397501, 12: 2397529, 15: 2397819, 23: 2397847, 10054: 2426491, 10055: 2426490, 10056: 2435544, 10059: 2435600, 10067: 2435858}
[2025-07-26 22:59:11] 2025-07-27 02:58:38,775 | INFO     | --------------------------------------------------
[2025-07-26 22:59:11] 2025-07-27 02:58:38,775 | INFO     | 
[2025-07-26 22:59:11] 2025-07-27 02:58:38,776 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-26 22:59:11] 2025-07-27 02:58:38,814 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 22:59:11] 2025-07-27 02:58:38,815 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 22:59:11] 2025-07-27 02:58:38,815 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 22:59:11] 2025-07-27 02:58:38,815 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 22:59:11] 2025-07-27 02:58:38,815 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 22:59:11] 2025-07-27 02:58:38,815 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 22:59:11] 2025-07-27 02:58:38,815 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 22:59:11] 2025-07-27 02:58:38,815 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 22:59:11] 2025-07-27 02:58:38,815 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 22:59:11] 2025-07-27 02:58:38,815 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 22:59:11] 2025-07-27 02:58:38,815 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 22:59:11] 2025-07-27 02:58:38,816 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 22:59:11] 2025-07-27 02:58:38,816 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 22:59:11] 2025-07-27 02:58:38,816 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 22:59:11] 2025-07-27 02:58:38,816 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 22:59:11] 2025-07-27 02:58:38,816 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 22:59:11] 2025-07-27 02:58:38,816 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 22:59:11] 2025-07-27 02:58:38,816 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 22:59:11] 2025-07-27 02:58:38,816 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 22:59:11] 2025-07-27 02:58:38,816 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 22:59:11] 2025-07-27 02:58:38,816 | INFO     | job 6745354762 has completed (purged errors)
[2025-07-26 22:59:11] 2025-07-27 02:58:38,816 | INFO     | overall cleanup function is called
[2025-07-26 22:59:11] 2025-07-27 02:58:39,826 | INFO     | --- collectZombieJob: --- 10, [2690540]
[2025-07-26 22:59:11] 2025-07-27 02:58:39,826 | INFO     | zombie collector waiting for pid 2690540
[2025-07-26 22:59:11] 2025-07-27 02:58:39,826 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 22:59:11] 2025-07-27 02:58:39,827 | INFO     | collected zombie processes
[2025-07-26 22:59:11] 2025-07-27 02:58:39,827 | INFO     | will attempt to kill all subprocesses of pid=2690540
[2025-07-26 22:59:11] 2025-07-27 02:58:40,351 | INFO     | process IDs to be killed: [2690540] (in reverse order)
[2025-07-26 22:59:11] 2025-07-27 02:58:40,509 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 22:59:11] 2025-07-27 02:58:40,510 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 22:59:11] 2025-07-27 02:58:40,529 | INFO     | did not find any defunct processes belonging to 2690540
[2025-07-26 22:59:11] 2025-07-27 02:58:40,549 | INFO     | did not find any defunct processes belonging to 2690540
[2025-07-26 22:59:11] 2025-07-27 02:58:40,549 | INFO     | ready for new job
[2025-07-26 22:59:11] 2025-07-27 02:58:40,549 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 22:59:11] 2025-07-27 02:58:40,551 | INFO     | ***************************************
[2025-07-26 22:59:11] 2025-07-27 02:58:40,551 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 22:59:11] 2025-07-27 02:58:40,551 | INFO     | ***************************************
[2025-07-26 22:59:11] 2025-07-27 02:58:40,551 | INFO     | 
[2025-07-26 22:59:11] 2025-07-27 02:58:40,570 | INFO     | architecture information:
[2025-07-26 22:59:11] 2025-07-27 02:58:40,570 | INFO     | executing command: cat /etc/os-release
[2025-07-26 22:59:11] 2025-07-27 02:58:40,606 | INFO     | cat /etc/os-release:
[2025-07-26 22:59:11] NAME="CentOS Linux"
[2025-07-26 22:59:11] VERSION="7 (Core)"
[2025-07-26 22:59:11] ID="centos"
[2025-07-26 22:59:11] ID_LIKE="rhel fedora"
[2025-07-26 22:59:11] VERSION_ID="7"
[2025-07-26 22:59:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 22:59:11] ANSI_COLOR="0;31"
[2025-07-26 22:59:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 22:59:11] HOME_URL="https://www.centos.org/"
[2025-07-26 22:59:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 22:59:11] 
[2025-07-26 22:59:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 22:59:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 22:59:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 22:59:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 22:59:11] 
[2025-07-26 22:59:11] 2025-07-27 02:58:40,607 | INFO     | ***************************************
[2025-07-26 22:59:11] 2025-07-27 02:58:41,110 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-26 22:59:11] 2025-07-27 02:58:41,138 | INFO     | sufficient remaining disk space (75619106816 B)
[2025-07-26 22:59:11] 2025-07-27 02:58:41,139 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 22:59:11] 2025-07-27 02:58:41,139 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 22:59:11] 2025-07-27 02:58:41,139 | INFO     | update_server=False
[2025-07-26 22:59:11] 2025-07-27 02:58:41,139 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 22:59:11] 2025-07-27 02:58:41,139 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 22:59:11] 2025-07-27 02:58:41,140 | INFO     | aborting loop
[2025-07-26 22:59:11] 2025-07-27 02:58:41,140 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 22:59:11] 2025-07-27 02:58:41,140 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 22:59:11] 2025-07-27 02:58:41,356 | INFO     | all payload control threads have been joined
[2025-07-26 22:59:11] 2025-07-27 02:58:41,437 | INFO     | all data control threads have been joined
[2025-07-26 22:59:11] 2025-07-27 02:58:41,939 | INFO     | all job control threads have been joined
[2025-07-26 22:59:11] 2025-07-27 02:58:42,144 | INFO     | [job] retrieve thread has finished
[2025-07-26 22:59:11] 2025-07-27 02:58:42,145 | INFO     | [job] job monitor thread has finished
[2025-07-26 22:59:11] 2025-07-27 02:58:42,157 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 22:59:11] 2025-07-27 02:58:42,361 | INFO     | [payload] control thread has finished
[2025-07-26 22:59:11] 2025-07-27 02:58:42,443 | INFO     | [data] control thread has finished
[2025-07-26 22:59:11] 2025-07-27 02:58:42,509 | INFO     | [job] validate thread has finished
[2025-07-26 22:59:11] 2025-07-27 02:58:42,658 | INFO     | [payload] failed_post thread has finished
[2025-07-26 22:59:11] 2025-07-27 02:58:42,944 | INFO     | [job] control thread has finished
[2025-07-26 22:59:11] 2025-07-27 02:58:43,035 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 22:59:11] 2025-07-27 02:58:43,146 | INFO     | [data] copytool_out thread has finished
[2025-07-26 22:59:11] 2025-07-27 02:58:43,217 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 22:59:11] 2025-07-27 02:58:43,261 | INFO     | [payload] validate_post thread has finished
[2025-07-26 22:59:11] 2025-07-27 02:58:43,370 | INFO     | [data] copytool_in thread has finished
[2025-07-26 22:59:11] 2025-07-27 02:58:43,784 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 22:59:11] 2025-07-27 02:58:44,790 | INFO     | [job] queue monitor thread has finished
[2025-07-26 22:59:11] 2025-07-27 02:58:45,147 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 22:59:11] 2025-07-27 02:58:51,827 | INFO     | job.realtimelogging is not enabled
[2025-07-26 22:59:11] 2025-07-27 02:58:52,833 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 22:59:11] 2025-07-27 02:58:54,104 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139672468977472)>', '<ExcThread(monitor, started 139671984133888)>']
[2025-07-26 22:59:11] 2025-07-27 02:58:59,130 | INFO     | all workflow threads have been joined
[2025-07-26 22:59:11] 2025-07-27 02:58:59,130 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 22:59:11] 2025-07-27 02:58:59,130 | INFO     | traces error code: 0
[2025-07-26 22:59:11] 2025-07-27 02:58:59,131 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 22:59:11] 2025-07-27 02:59:10,851 | INFO     | PID=2683085 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 22:59:11] 2025-07-27 02:59:10,851 | INFO     | .. there are 20 such processes running
[2025-07-26 22:59:11] 2025-07-27 02:59:10,852 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 22:59:11] 2025-07-27 02:59:10,852 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 22:59:11] 2025-07-27 02:59:10,852 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 22:59:11] 2025-07-27 02:59:10,852 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 22:59:11] 2025-07-27 02:59:10,852 | INFO     | [monitor] control thread has ended
[2025-07-26 22:59:11] 2025-07-27 02:59:11,018 [wrapper] ==== pilot stdout END ====
[2025-07-26 22:59:11] 2025-07-27 02:59:11,022 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 22:59:11] 2025-07-27 02:59:11,028 [wrapper] pilotpid: 2683085
[2025-07-26 22:59:11] 2025-07-27 02:59:11,034 [wrapper] Pilot exit status: 0
[2025-07-26 22:59:11] 2025-07-27 02:59:11,059 [wrapper] pandaids: 6745354762
[2025-07-26 22:59:11] 2025-07-27 02:59:11,184 [wrapper] cleanup supervisor_pilot 3284852 2683086
[2025-07-26 22:59:11] 2025-07-27 02:59:11,190 [wrapper] Test setup, not cleaning
[2025-07-26 22:59:11] 2025-07-27 02:59:11,197 [wrapper] apfmon messages muted
[2025-07-26 22:59:11] 2025-07-27 02:59:11,203 [wrapper] ==== wrapper stdout END ====
[2025-07-26 22:59:11] 2025-07-27 02:59:11,210 [wrapper] ==== wrapper stderr END ====
[2025-07-26 22:59:11]  *** Error codes and diagnostics ***
[2025-07-26 22:59:11]     "exeErrorCode": 0,
[2025-07-26 22:59:11]     "exeErrorDiag": "",
[2025-07-26 22:59:11]     "pilotErrorCode": 0,
[2025-07-26 22:59:11]     "pilotErrorDiag": "",
[2025-07-26 22:59:11]  *** Listing of results directory ***
[2025-07-26 22:59:11] total 354004
[2025-07-26 22:59:11] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 14:40 pilot3.tar.gz
[2025-07-26 22:59:11] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 15:06 queuedata.json
[2025-07-26 22:59:11] -rwx------. 1 boincer umatlas     36292 Jul 26 15:08 runpilot2-wrapper.sh
[2025-07-26 22:59:11] -rw-r--r--. 1 boincer umatlas       100 Jul 26 20:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 22:59:11] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 20:09 run_atlas
[2025-07-26 22:59:11] -rw-r--r--. 1 boincer umatlas       105 Jul 26 20:09 job.xml
[2025-07-26 22:59:11] -rw-r--r--. 2 boincer umatlas 148230416 Jul 26 20:09 EVNT.45743347._002427.pool.root.1
[2025-07-26 22:59:11] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 20:09 shared
[2025-07-26 22:59:11] -rw-r--r--. 2 boincer umatlas    542893 Jul 26 20:09 input.tar.gz
[2025-07-26 22:59:11] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 20:09 start_atlas.sh
[2025-07-26 22:59:11] -rw-r--r--. 1 boincer umatlas         0 Jul 26 20:09 boinc_lockfile
[2025-07-26 22:59:11] -rw-r--r--. 1 boincer umatlas      2562 Jul 26 20:09 pandaJob.out
[2025-07-26 22:59:11] -rw-------. 1 boincer umatlas    980117 Jul 26 20:10 agis_schedconf.cvmfs.json
[2025-07-26 22:59:11] -rw-------. 1 boincer umatlas   1593052 Jul 26 20:10 agis_ddmendpoints.agis.ALL.json
[2025-07-26 22:59:11] drwx------. 4 boincer umatlas      4096 Jul 26 20:10 pilot3
[2025-07-26 22:59:11] -rw-------. 1 boincer umatlas 207870158 Jul 26 22:57 HITS.45743349._042936.pool.root.1
[2025-07-26 22:59:11] -rw-r--r--. 1 boincer umatlas       531 Jul 26 22:57 boinc_task_state.xml
[2025-07-26 22:59:11] -rw-------. 1 boincer umatlas      1042 Jul 26 22:58 memory_monitor_summary.json
[2025-07-26 22:59:11] -rw-------. 1 boincer umatlas    347780 Jul 26 22:58 log.45743349._042936.job.log.tgz.1
[2025-07-26 22:59:11] -rw-------. 1 boincer umatlas      7793 Jul 26 22:58 heartbeat.json
[2025-07-26 22:59:11] -rw-r--r--. 1 boincer umatlas      6934 Jul 26 22:58 init_data.xml
[2025-07-26 22:59:11] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 22:59 boinc_mmap_file
[2025-07-26 22:59:11] -rw-r--r--. 1 boincer umatlas        27 Jul 26 22:59 wrapper_checkpoint.txt
[2025-07-26 22:59:11] -rw-------. 1 boincer umatlas        95 Jul 26 22:59 pilot_heartbeat.json
[2025-07-26 22:59:11] -rw-------. 1 boincer umatlas       823 Jul 26 22:59 pilotlog.txt
[2025-07-26 22:59:11] -rw-------. 1 boincer umatlas    917441 Jul 26 22:59 log.45743349._042936.job.log.1
[2025-07-26 22:59:11] -rw-------. 1 boincer umatlas       357 Jul 26 22:59 output.list
[2025-07-26 22:59:11] -rw-r--r--. 1 boincer umatlas       620 Jul 26 22:59 runtime_log
[2025-07-26 22:59:11] -rw-------. 1 boincer umatlas   1280000 Jul 26 22:59 result.tar.gz
[2025-07-26 22:59:11] -rw-r--r--. 1 boincer umatlas      8656 Jul 26 22:59 runtime_log.err
[2025-07-26 22:59:11] -rw-------. 1 boincer umatlas       657 Jul 26 22:59 QCHODmnQzz7n9Rq4apOajLDm4fhM0noT9bVof3QYDm2H1KDmg5r0Dn.diag
[2025-07-26 22:59:11] -rw-r--r--. 1 boincer umatlas     21249 Jul 26 22:59 stderr.txt
[2025-07-26 22:59:11] HITS file was successfully produced:
[2025-07-26 22:59:11] -rw-------. 1 boincer umatlas 207870158 Jul 26 22:57 shared/HITS.pool.root.1
[2025-07-26 22:59:11]  *** Contents of shared directory: ***
[2025-07-26 22:59:11] total 349564
[2025-07-26 22:59:11] -rw-r--r--. 2 boincer umatlas 148230416 Jul 26 20:09 ATLAS.root_0
[2025-07-26 22:59:11] -rw-r--r--. 2 boincer umatlas    542893 Jul 26 20:09 input.tar.gz
[2025-07-26 22:59:11] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 20:09 start_atlas.sh
[2025-07-26 22:59:11] -rw-------. 1 boincer umatlas 207870158 Jul 26 22:57 HITS.pool.root.1
[2025-07-26 22:59:11] -rw-------. 1 boincer umatlas   1280000 Jul 26 22:59 result.tar.gz
22:59:13 (2678593): run_atlas exited; CPU time 41544.184372
22:59:13 (2678593): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN