Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
03:49:50 (978089): wrapper (7.7.26015): starting
03:49:50 (978089): wrapper: running run_atlas (--nthreads 12)
[2025-07-31 03:49:50] Arguments: --nthreads 12
[2025-07-31 03:49:50] Threads: 12
[2025-07-31 03:49:50] Checking for CVMFS
[2025-07-31 03:49:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-31 03:49:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-31 03:49:52] Running cvmfs_config stat atlas.cern.ch
[2025-07-31 03:49:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-31 03:49:54] 2.13.0.0 1164766 12903 96332 148945 0 188 2487374 4096001 11576 130560 0 139693135 99.999 466879 198 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-07-31 03:49:54] CVMFS is ok
[2025-07-31 03:49:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-31 03:49:54] Checking for apptainer binary...
[2025-07-31 03:49:54] apptainer is not installed, using version from CVMFS
[2025-07-31 03:49:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-31 03:50:34] epyc7v12
[2025-07-31 03:50:34] apptainer works
[2025-07-31 03:50:34] Set ATHENA_PROC_NUMBER=12
[2025-07-31 03:50:34] Set ATHENA_CORE_NUMBER=12
[2025-07-31 03:50:35] Starting ATLAS job with PandaID=6745354810
[2025-07-31 03:50:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31434/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-31 06:21:51]  *** The last 200 lines of the pilot log: ***
[2025-07-31 06:21:51] 2025-07-31 06:21:12,226 | INFO     | chi2: 12.30769036804748
[2025-07-31 06:21:51] 2025-07-31 06:21:12,226 | INFO     | sum of square deviations: 605622894.8480012
[2025-07-31 06:21:51] 2025-07-31 06:21:12,231 | INFO     | sum of deviations: 109861660790.20004
[2025-07-31 06:21:51] 2025-07-31 06:21:12,231 | INFO     | mean x: 1753938597.096
[2025-07-31 06:21:51] 2025-07-31 06:21:12,243 | INFO     | mean y: 2420331.4
[2025-07-31 06:21:51] 2025-07-31 06:21:12,243 | INFO     | -- intersect: -318166870889.6022
[2025-07-31 06:21:51] 2025-07-31 06:21:12,243 | INFO     | intersect: -318166870889.6022
[2025-07-31 06:21:51] 2025-07-31 06:21:12,243 | INFO     | chi2: 11.600510383919335
[2025-07-31 06:21:51] 2025-07-31 06:21:12,243 | INFO     | current chi2=11.600510383919335 (change=5.745838276563119 %)
[2025-07-31 06:21:51] 2025-07-31 06:21:12,244 | INFO     | right removable region: 124
[2025-07-31 06:21:51] 2025-07-31 06:21:12,244 | INFO     | sum of square deviations: 605615574.8480012
[2025-07-31 06:21:51] 2025-07-31 06:21:12,244 | INFO     | sum of deviations: 58273311039.29597
[2025-07-31 06:21:51] 2025-07-31 06:21:12,245 | INFO     | mean x: 1753938902.096
[2025-07-31 06:21:51] 2025-07-31 06:21:12,245 | INFO     | mean y: 2506141.392
[2025-07-31 06:21:51] 2025-07-31 06:21:12,245 | INFO     | -- intersect: -168764334459.45258
[2025-07-31 06:21:51] 2025-07-31 06:21:12,245 | INFO     | intersect: -168764334459.45258
[2025-07-31 06:21:51] 2025-07-31 06:21:12,245 | INFO     | chi2: 6.082795684605358
[2025-07-31 06:21:51] 2025-07-31 06:21:12,245 | INFO     | current chi2=6.082795684605358 (change=50.57727727375102 %)
[2025-07-31 06:21:51] 2025-07-31 06:21:12,246 | INFO     | sum of square deviations: 535805954.80000097
[2025-07-31 06:21:51] 2025-07-31 06:21:12,246 | INFO     | sum of deviations: 17786640073.19999
[2025-07-31 06:21:51] 2025-07-31 06:21:12,246 | INFO     | mean x: 1753939054.6
[2025-07-31 06:21:51] 2025-07-31 06:21:12,246 | INFO     | mean y: 2594466.7333333334
[2025-07-31 06:21:51] 2025-07-31 06:21:12,246 | INFO     | -- intersect: -58221250182.66698
[2025-07-31 06:21:51] 2025-07-31 06:21:12,247 | INFO     | intersect: -58221250182.66698
[2025-07-31 06:21:51] 2025-07-31 06:21:12,247 | INFO     | chi2: 2.0561201402973115
[2025-07-31 06:21:51] 2025-07-31 06:21:12,247 | INFO     | current chi2=2.0561201402973115 (change=66.1977773558786 %)
[2025-07-31 06:21:51] 2025-07-31 06:21:12,247 | INFO     | sum of square deviations: 471577834.7478262
[2025-07-31 06:21:51] 2025-07-31 06:21:12,248 | INFO     | sum of deviations: -2900541217.199997
[2025-07-31 06:21:51] 2025-07-31 06:21:12,248 | INFO     | mean x: 1753939207.104348
[2025-07-31 06:21:51] 2025-07-31 06:21:12,248 | INFO     | mean y: 2643162.6
[2025-07-31 06:21:51] 2025-07-31 06:21:12,248 | INFO     | -- intersect: 10790624674.474257
[2025-07-31 06:21:51] 2025-07-31 06:21:12,248 | INFO     | intersect: 10790624674.474257
[2025-07-31 06:21:51] 2025-07-31 06:21:12,248 | INFO     | chi2: 0.9622751209599194
[2025-07-31 06:21:51] 2025-07-31 06:21:12,249 | INFO     | current chi2=0.9622751209599194 (change=53.19947010388333 %)
[2025-07-31 06:21:51] 2025-07-31 06:21:12,249 | INFO     | sum of square deviations: 412698652.19090927
[2025-07-31 06:21:51] 2025-07-31 06:21:12,249 | INFO     | sum of deviations: -7988507284.445455
[2025-07-31 06:21:51] 2025-07-31 06:21:12,250 | INFO     | mean x: 1753939359.6090908
[2025-07-31 06:21:51] 2025-07-31 06:21:12,250 | INFO     | mean y: 2656106.2454545456
[2025-07-31 06:21:51] 2025-07-31 06:21:12,250 | INFO     | -- intersect: 33953233061.9253
[2025-07-31 06:21:51] 2025-07-31 06:21:12,250 | INFO     | intersect: 33953233061.9253
[2025-07-31 06:21:51] 2025-07-31 06:21:12,250 | INFO     | chi2: 0.8660584029108667
[2025-07-31 06:21:51] 2025-07-31 06:21:12,250 | INFO     | current chi2=0.8660584029108667 (change=9.998878278498104 %)
[2025-07-31 06:21:51] 2025-07-31 06:21:12,250 | INFO     | left removable region: 40
[2025-07-31 06:21:51] 2025-07-31 06:21:12,259 | INFO     | sum of square deviations: 183777453.8095241
[2025-07-31 06:21:51] 2025-07-31 06:21:12,259 | INFO     | sum of deviations: -155196888.61904764
[2025-07-31 06:21:51] 2025-07-31 06:21:12,259 | INFO     | mean x: 1753939786.6190476
[2025-07-31 06:21:51] 2025-07-31 06:21:12,259 | INFO     | mean y: 2679375.261904762
[2025-07-31 06:21:51] 2025-07-31 06:21:12,259 | INFO     | -- intersect: 1483851260.4190476
[2025-07-31 06:21:51] 2025-07-31 06:21:12,259 | INFO     | intersect: 1483851260.4190476
[2025-07-31 06:21:51] 2025-07-31 06:21:12,260 | INFO     | chi2: 0.00019017333829941747
[2025-07-31 06:21:51] 2025-07-31 06:21:12,260 | INFO     | -- intersect: 1483851260.4190476
[2025-07-31 06:21:51] 2025-07-31 06:21:12,260 | INFO     | current memory leak: -0.84 B/s (using 84 data points, chi2=0.00)
[2025-07-31 06:21:51] 2025-07-31 06:21:12,261 | INFO     | could have reported an average CPU frequency of 2415 MHz (8 samples)
[2025-07-31 06:21:51] 2025-07-31 06:21:12,261 | INFO     | ..............................
[2025-07-31 06:21:51] 2025-07-31 06:21:12,261 | INFO     | . Timing measurements:
[2025-07-31 06:21:51] 2025-07-31 06:21:12,261 | INFO     | . get job = 0 s
[2025-07-31 06:21:51] 2025-07-31 06:21:12,261 | INFO     | . initial setup = 9 s
[2025-07-31 06:21:51] 2025-07-31 06:21:12,261 | INFO     | . payload setup = 234 s
[2025-07-31 06:21:51] 2025-07-31 06:21:12,261 | INFO     | . stage-in = 0 s
[2025-07-31 06:21:51] 2025-07-31 06:21:12,261 | INFO     | . payload execution = 8089 s
[2025-07-31 06:21:51] 2025-07-31 06:21:12,261 | INFO     | . stage-out = 3 s
[2025-07-31 06:21:51] 2025-07-31 06:21:12,261 | INFO     | . log creation = 1 s
[2025-07-31 06:21:51] 2025-07-31 06:21:12,261 | INFO     | ..............................
[2025-07-31 06:21:51] 2025-07-31 06:21:12,533 | INFO     | 
[2025-07-31 06:21:51] 2025-07-31 06:21:12,534 | INFO     | job summary report
[2025-07-31 06:21:51] 2025-07-31 06:21:12,534 | INFO     | --------------------------------------------------
[2025-07-31 06:21:51] 2025-07-31 06:21:12,534 | INFO     | PanDA job id: 6745354810
[2025-07-31 06:21:51] 2025-07-31 06:21:12,534 | INFO     | task id: 45743349
[2025-07-31 06:21:51] 2025-07-31 06:21:12,534 | INFO     | errors: (none)
[2025-07-31 06:21:51] 2025-07-31 06:21:12,534 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-31 06:21:51] 2025-07-31 06:21:12,534 | INFO     | pilot state: finished 
[2025-07-31 06:21:51] 2025-07-31 06:21:12,535 | INFO     | transexitcode: 0
[2025-07-31 06:21:51] 2025-07-31 06:21:12,535 | INFO     | exeerrorcode: 0
[2025-07-31 06:21:51] 2025-07-31 06:21:12,535 | INFO     | exeerrordiag: 
[2025-07-31 06:21:51] 2025-07-31 06:21:12,535 | INFO     | exitcode: 0
[2025-07-31 06:21:51] 2025-07-31 06:21:12,535 | INFO     | exitmsg: OK
[2025-07-31 06:21:51] 2025-07-31 06:21:12,535 | INFO     | cpuconsumptiontime: 53874 s
[2025-07-31 06:21:51] 2025-07-31 06:21:12,535 | INFO     | nevents: 400
[2025-07-31 06:21:51] 2025-07-31 06:21:12,535 | INFO     | neventsw: 0
[2025-07-31 06:21:51] 2025-07-31 06:21:12,535 | INFO     | pid: 1049865
[2025-07-31 06:21:51] 2025-07-31 06:21:12,535 | INFO     | pgrp: 1049865
[2025-07-31 06:21:51] 2025-07-31 06:21:12,535 | INFO     | corecount: 12
[2025-07-31 06:21:51] 2025-07-31 06:21:12,535 | INFO     | event service: False
[2025-07-31 06:21:51] 2025-07-31 06:21:12,536 | INFO     | sizes: {0: 2391705, 1: 2391960, 2: 2391960, 12: 2391988, 23: 2392016, 34: 2392044, 45: 2392200, 56: 2392228, 67: 2392256, 77: 2392284, 88: 2392340, 99: 2392648, 11
[2025-07-31 06:21:51] 2025-07-31 06:21:12,536 | INFO     | --------------------------------------------------
[2025-07-31 06:21:51] 2025-07-31 06:21:12,536 | INFO     | 
[2025-07-31 06:21:51] 2025-07-31 06:21:12,536 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31434/slots/0
[2025-07-31 06:21:51] 2025-07-31 06:21:13,304 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-31 06:21:51] 2025-07-31 06:21:13,304 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-31 06:21:51] 2025-07-31 06:21:13,304 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-31 06:21:51] 2025-07-31 06:21:13,304 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-31 06:21:51] 2025-07-31 06:21:13,305 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-31 06:21:51] 2025-07-31 06:21:13,305 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-31 06:21:51] 2025-07-31 06:21:13,305 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-31 06:21:51] 2025-07-31 06:21:13,305 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-31 06:21:51] 2025-07-31 06:21:13,305 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-31 06:21:51] 2025-07-31 06:21:13,305 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-31 06:21:51] 2025-07-31 06:21:13,305 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-31 06:21:51] 2025-07-31 06:21:13,305 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-31 06:21:51] 2025-07-31 06:21:13,305 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-31 06:21:51] 2025-07-31 06:21:13,305 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-31 06:21:51] 2025-07-31 06:21:13,306 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-31 06:21:51] 2025-07-31 06:21:13,306 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-31 06:21:51] 2025-07-31 06:21:13,306 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-31 06:21:51] 2025-07-31 06:21:13,306 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-31 06:21:51] 2025-07-31 06:21:13,306 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-31 06:21:51] 2025-07-31 06:21:13,306 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-31 06:21:51] 2025-07-31 06:21:13,306 | INFO     | job 6745354810 has completed (purged errors)
[2025-07-31 06:21:51] 2025-07-31 06:21:13,311 | INFO     | overall cleanup function is called
[2025-07-31 06:21:51] 2025-07-31 06:21:14,323 | INFO     | --- collectZombieJob: --- 10, [1049865]
[2025-07-31 06:21:51] 2025-07-31 06:21:14,323 | INFO     | zombie collector waiting for pid 1049865
[2025-07-31 06:21:51] 2025-07-31 06:21:14,323 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-31 06:21:51] 2025-07-31 06:21:14,323 | INFO     | collected zombie processes
[2025-07-31 06:21:51] 2025-07-31 06:21:14,323 | INFO     | will attempt to kill all subprocesses of pid=1049865
[2025-07-31 06:21:51] 2025-07-31 06:21:15,645 | INFO     | process IDs to be killed: [1049865] (in reverse order)
[2025-07-31 06:21:51] 2025-07-31 06:21:22,213 | WARNING  | found no corresponding commands to process id(s)
[2025-07-31 06:21:51] 2025-07-31 06:21:22,213 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-31 06:21:51] 2025-07-31 06:21:22,275 | INFO     | did not find any defunct processes belonging to 1049865
[2025-07-31 06:21:51] 2025-07-31 06:21:22,318 | INFO     | did not find any defunct processes belonging to 1049865
[2025-07-31 06:21:51] 2025-07-31 06:21:22,323 | INFO     | ready for new job
[2025-07-31 06:21:51] 2025-07-31 06:21:22,323 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-31 06:21:51] 2025-07-31 06:21:22,326 | INFO     | ***************************************
[2025-07-31 06:21:51] 2025-07-31 06:21:22,326 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-31 06:21:51] 2025-07-31 06:21:22,326 | INFO     | ***************************************
[2025-07-31 06:21:51] 2025-07-31 06:21:22,326 | INFO     | 
[2025-07-31 06:21:51] 2025-07-31 06:21:22,374 | INFO     | architecture information:
[2025-07-31 06:21:51] 2025-07-31 06:21:22,403 | INFO     | executing command: cat /etc/os-release
[2025-07-31 06:21:51] 2025-07-31 06:21:22,936 | INFO     | cat /etc/os-release:
[2025-07-31 06:21:51] NAME="CentOS Linux"
[2025-07-31 06:21:51] VERSION="7 (Core)"
[2025-07-31 06:21:51] ID="centos"
[2025-07-31 06:21:51] ID_LIKE="rhel fedora"
[2025-07-31 06:21:51] VERSION_ID="7"
[2025-07-31 06:21:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-31 06:21:51] ANSI_COLOR="0;31"
[2025-07-31 06:21:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-31 06:21:51] HOME_URL="https://www.centos.org/"
[2025-07-31 06:21:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-31 06:21:51] 
[2025-07-31 06:21:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-31 06:21:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-31 06:21:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-31 06:21:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-31 06:21:51] 
[2025-07-31 06:21:51] 2025-07-31 06:21:22,936 | INFO     | ***************************************
[2025-07-31 06:21:51] 2025-07-31 06:21:23,443 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31434/slots/0
[2025-07-31 06:21:51] 2025-07-31 06:21:23,629 | INFO     | sufficient remaining disk space (223718932480 B)
[2025-07-31 06:21:51] 2025-07-31 06:21:23,629 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-31 06:21:51] 2025-07-31 06:21:23,630 | INFO     | current server update state: UPDATING_FINAL
[2025-07-31 06:21:51] 2025-07-31 06:21:23,630 | INFO     | update_server=False
[2025-07-31 06:21:51] 2025-07-31 06:21:23,630 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-31 06:21:51] 2025-07-31 06:21:23,631 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-31 06:21:51] 2025-07-31 06:21:23,799 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-31 06:21:51] 2025-07-31 06:21:23,799 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-31 06:21:51] 2025-07-31 06:21:23,799 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-31 06:21:51] 2025-07-31 06:21:23,799 | INFO     | will abort loop
[2025-07-31 06:21:51] 2025-07-31 06:21:23,867 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-31 06:21:51] 2025-07-31 06:21:23,879 | INFO     | all job control threads have been joined
[2025-07-31 06:21:51] 2025-07-31 06:21:24,031 | INFO     | all payload control threads have been joined
[2025-07-31 06:21:51] 2025-07-31 06:21:24,307 | INFO     | all data control threads have been joined
[2025-07-31 06:21:51] 2025-07-31 06:21:24,639 | INFO     | [job] retrieve thread has finished
[2025-07-31 06:21:51] 2025-07-31 06:21:24,751 | INFO     | [payload] execute_payloads thread has finished
[2025-07-31 06:21:51] 2025-07-31 06:21:24,807 | INFO     | [job] job monitor thread has finished
[2025-07-31 06:21:51] 2025-07-31 06:21:24,811 | INFO     | [payload] validate_pre thread has finished
[2025-07-31 06:21:51] 2025-07-31 06:21:24,835 | INFO     | [data] copytool_in thread has finished
[2025-07-31 06:21:51] 2025-07-31 06:21:24,883 | INFO     | [job] control thread has finished
[2025-07-31 06:21:51] 2025-07-31 06:21:25,039 | INFO     | [payload] control thread has finished
[2025-07-31 06:21:51] 2025-07-31 06:21:25,315 | INFO     | [data] control thread has finished
[2025-07-31 06:21:51] 2025-07-31 06:21:25,435 | INFO     | [job] create_data_payload thread has finished
[2025-07-31 06:21:51] 2025-07-31 06:21:25,519 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-31 06:21:51] 2025-07-31 06:21:25,575 | INFO     | [payload] failed_post thread has finished
[2025-07-31 06:21:51] 2025-07-31 06:21:25,663 | INFO     | [job] validate thread has finished
[2025-07-31 06:21:51] 2025-07-31 06:21:25,875 | INFO     | [data] copytool_out thread has finished
[2025-07-31 06:21:51] 2025-07-31 06:21:25,971 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-31 06:21:51] 2025-07-31 06:21:26,211 | INFO     | [payload] validate_post thread has finished
[2025-07-31 06:21:51] 2025-07-31 06:21:26,527 | INFO     | [job] queue monitor thread has finished
[2025-07-31 06:21:51] 2025-07-31 06:21:27,647 | INFO     | [data] queue_monitor thread has finished
[2025-07-31 06:21:51] 2025-07-31 06:21:28,775 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140096884324160)>', '<ExcThread(monitor, started 140096422520576)>']
[2025-07-31 06:21:51] 2025-07-31 06:21:33,799 | INFO     | all workflow threads have been joined
[2025-07-31 06:21:51] 2025-07-31 06:21:33,799 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-31 06:21:51] 2025-07-31 06:21:33,799 | INFO     | traces error code: 0
[2025-07-31 06:21:51] 2025-07-31 06:21:33,800 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-31 06:21:51] 2025-07-31 06:21:45,844 | INFO     | PID=1009927 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-31 06:21:51] 2025-07-31 06:21:45,844 | INFO     | .. there are 16 such processes running
[2025-07-31 06:21:51] 2025-07-31 06:21:45,845 | INFO     | found 0 job(s) in 20 queues
[2025-07-31 06:21:51] 2025-07-31 06:21:45,845 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-31 06:21:51] 2025-07-31 06:21:45,845 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-31 06:21:51] 2025-07-31 06:21:45,845 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-31 06:21:51] 2025-07-31 06:21:45,845 | CRITICAL | thread 'MainThread' is not alive
[2025-07-31 06:21:51] 2025-07-31 06:21:45,845 | INFO     | [monitor] control thread has ended
[2025-07-31 06:21:51] 2025-07-31 06:21:46,619 [wrapper] ==== pilot stdout END ====
[2025-07-31 06:21:51] 2025-07-31 06:21:46,711 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-31 06:21:51] 2025-07-31 06:21:46,787 [wrapper] pilotpid: 1009927
[2025-07-31 06:21:51] 2025-07-31 06:21:46,891 [wrapper] Pilot exit status: 0
[2025-07-31 06:21:51] 2025-07-31 06:21:47,427 [wrapper] pandaids: 6745354810
[2025-07-31 06:21:51] 2025-07-31 06:21:48,823 [wrapper] cleanup supervisor_pilot 1442729 1009928
[2025-07-31 06:21:51] 2025-07-31 06:21:48,915 [wrapper] Test setup, not cleaning
[2025-07-31 06:21:51] 2025-07-31 06:21:49,003 [wrapper] apfmon messages muted
[2025-07-31 06:21:51] 2025-07-31 06:21:49,107 [wrapper] ==== wrapper stdout END ====
[2025-07-31 06:21:51] 2025-07-31 06:21:49,223 [wrapper] ==== wrapper stderr END ====
[2025-07-31 06:21:51]  *** Error codes and diagnostics ***
[2025-07-31 06:21:51]     "exeErrorCode": 0,
[2025-07-31 06:21:51]     "exeErrorDiag": "",
[2025-07-31 06:21:51]     "pilotErrorCode": 0,
[2025-07-31 06:21:51]     "pilotErrorDiag": "",
[2025-07-31 06:21:51]  *** Listing of results directory ***
[2025-07-31 06:21:51] total 347932
[2025-07-31 06:21:51] -rw-r--r-- 1 boinc boinc    530466 Jul 26 18:40 pilot3.tar.gz
[2025-07-31 06:21:51] -rw-r--r-- 1 boinc boinc      5112 Jul 26 19:08 queuedata.json
[2025-07-31 06:21:51] -rwx------ 1 boinc boinc     36292 Jul 26 19:08 runpilot2-wrapper.sh
[2025-07-31 06:21:51] -rw-rw-r-- 1 boinc boinc       100 Jul 31 03:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-31 06:21:51] -rwxr-xr-x 1 boinc boinc      7986 Jul 31 03:49 run_atlas
[2025-07-31 06:21:51] -rw-rw-r-- 1 boinc boinc       105 Jul 31 03:49 job.xml
[2025-07-31 06:21:51] -rw-r--r-- 2 boinc boinc 145636881 Jul 31 03:49 EVNT.45743347._002430.pool.root.1
[2025-07-31 06:21:51] -rw-r--r-- 2 boinc boinc     15095 Jul 31 03:49 start_atlas.sh
[2025-07-31 06:21:51] drwxrwx--x 2 boinc boinc      4096 Jul 31 03:49 shared
[2025-07-31 06:21:51] -rw-r--r-- 2 boinc boinc    542897 Jul 31 03:49 input.tar.gz
[2025-07-31 06:21:51] -rw-rw-r-- 1 boinc boinc      6568 Jul 31 03:49 init_data.xml
[2025-07-31 06:21:51] -rw-rw-r-- 1 boinc boinc         0 Jul 31 03:49 boinc_setup_complete
[2025-07-31 06:21:51] -rw-rw-r-- 1 boinc boinc         0 Jul 31 03:49 boinc_lockfile
[2025-07-31 06:21:51] -rw-rw-r-- 1 boinc boinc      2563 Jul 31 03:50 pandaJob.out
[2025-07-31 06:21:51] -rw------- 1 boinc boinc    977332 Jul 31 03:55 agis_schedconf.cvmfs.json
[2025-07-31 06:21:51] -rw------- 1 boinc boinc   1589827 Jul 31 03:55 agis_ddmendpoints.agis.ALL.json
[2025-07-31 06:21:51] drwx------ 4 boinc boinc      4096 Jul 31 03:55 pilot3
[2025-07-31 06:21:51] -rw------- 1 boinc boinc 204540135 Jul 31 06:17 HITS.45743349._042984.pool.root.1
[2025-07-31 06:21:51] -rw-rw-r-- 1 boinc boinc       530 Jul 31 06:17 boinc_task_state.xml
[2025-07-31 06:21:51] -rw------- 1 boinc boinc      1024 Jul 31 06:18 memory_monitor_summary.json
[2025-07-31 06:21:51] -rw------- 1 boinc boinc    384542 Jul 31 06:18 log.45743349._042984.job.log.tgz.1
[2025-07-31 06:21:51] -rw------- 1 boinc boinc      7738 Jul 31 06:21 heartbeat.json
[2025-07-31 06:21:51] -rw------- 1 boinc boinc        95 Jul 31 06:21 pilot_heartbeat.json
[2025-07-31 06:21:51] -rw------- 1 boinc boinc       893 Jul 31 06:21 pilotlog.txt
[2025-07-31 06:21:51] -rw------- 1 boinc boinc    731982 Jul 31 06:21 log.45743349._042984.job.log.1
[2025-07-31 06:21:51] -rw------- 1 boinc boinc       357 Jul 31 06:21 output.list
[2025-07-31 06:21:51] -rw-rw-r-- 1 boinc boinc       620 Jul 31 06:21 runtime_log
[2025-07-31 06:21:51] -rw------- 1 boinc boinc   1136640 Jul 31 06:21 result.tar.gz
[2025-07-31 06:21:51] -rw-rw-r-- 1 boinc boinc        27 Jul 31 06:21 wrapper_checkpoint.txt
[2025-07-31 06:21:51] -rw-rw-r-- 1 boinc boinc      8964 Jul 31 06:21 runtime_log.err
[2025-07-31 06:21:51] -rw------- 1 boinc boinc       652 Jul 31 06:21 TAHODmERzz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmYI1KDmcqIC7m.diag
[2025-07-31 06:21:51] -rw-rw-r-- 1 boinc boinc      8192 Jul 31 06:21 boinc_mmap_file
[2025-07-31 06:21:51] -rw-rw-r-- 1 boinc boinc     20807 Jul 31 06:21 stderr.txt
[2025-07-31 06:21:51] HITS file was successfully produced:
[2025-07-31 06:21:51] -rw------- 1 boinc boinc 204540135 Jul 31 06:17 shared/HITS.pool.root.1
[2025-07-31 06:21:51]  *** Contents of shared directory: ***
[2025-07-31 06:21:51] total 343640
[2025-07-31 06:21:51] -rw-r--r-- 2 boinc boinc 145636881 Jul 31 03:49 ATLAS.root_0
[2025-07-31 06:21:51] -rw-r--r-- 2 boinc boinc     15095 Jul 31 03:49 start_atlas.sh
[2025-07-31 06:21:51] -rw-r--r-- 2 boinc boinc    542897 Jul 31 03:49 input.tar.gz
[2025-07-31 06:21:51] -rw------- 1 boinc boinc 204540135 Jul 31 06:17 HITS.pool.root.1
[2025-07-31 06:21:51] -rw------- 1 boinc boinc   1136640 Jul 31 06:21 result.tar.gz
06:21:52 (978089): run_atlas exited; CPU time 54311.586577
06:21:52 (978089): called boinc_finish(0)

</stderr_txt>
]]>

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