Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:09:31 (1720967): wrapper (7.7.26015): starting
20:09:31 (1720967): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 20:09:31] Arguments: --nthreads 8
[2025-07-26 20:09:31] Threads: 8
[2025-07-26 20:09:31] Checking for CVMFS
[2025-07-26 20:09:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 20:09:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 20:09:32] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 20:09:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 20:09:32] 2.13.0.0 1923533 18926 297220 148793 1 411 19643923 32935937 17735 16776704 0 88905744 99.553 142206001 19393 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 20:09:32] CVMFS is ok
[2025-07-26 20:09:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 20:09:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 20:09:32] Further information can be found at the LHC@home message board.
[2025-07-26 20:09:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 20:09:32] Checking for apptainer binary...
[2025-07-26 20:09:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 20:09:32] Running /usr/bin/apptainer --version
[2025-07-26 20:09:32] apptainer version 1.4.1-1.el9
[2025-07-26 20:09:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 20:09:32] c7-3-17.aglt2.org
[2025-07-26 20:09:32] apptainer works
[2025-07-26 20:09:32] Set ATHENA_PROC_NUMBER=8
[2025-07-26 20:09:32] Set ATHENA_CORE_NUMBER=8
[2025-07-26 20:09:32] Starting ATLAS job with PandaID=6745354674
[2025-07-26 20:09:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 21:49:05]  *** The last 200 lines of the pilot log: ***
[2025-07-26 21:49:05]  lfn=log.45743349._042848.job.log.tgz.1
[2025-07-26 21:49:05]  mtime=0
[2025-07-26 21:49:05]  protocol_id=None
[2025-07-26 21:49:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 21:49:05]  replicas=None
[2025-07-26 21:49:05]  scope=mc23_13p6TeV
[2025-07-26 21:49:05]  status=None
[2025-07-26 21:49:05]  status_code=0
[2025-07-26 21:49:05]  storage_token=
[2025-07-26 21:49:05]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6745354674/log.45743349._042848.job.log.tgz.1
[2025-07-26 21:49:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5f/a7/log.45743349._042848.job.log.tgz.1
[2025-07-26 21:49:05]  workdir=None
[2025-07-26 21:49:05] ]
[2025-07-26 21:49:05] 2025-07-27 01:48:26,428 | INFO     | transferring file log.45743349._042848.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6745354674/log.45743349._042848.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 21:49:05] 2025-07-27 01:48:26,428 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6745354674/log.45743349._042848.job.log.tgz.1 /tmp/boinchome/slots/1/log.45743349._042848.job
[2025-07-26 21:49:05] 2025-07-27 01:48:26,455 | INFO     | adding to output.list: log.45743349._042848.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5f/a7/log.45743349._042848.job.log.tg
[2025-07-26 21:49:05] 2025-07-27 01:48:26,456 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 21:49:05] 2025-07-27 01:48:26,456 | INFO     | summary of transferred files:
[2025-07-26 21:49:05] 2025-07-27 01:48:26,456 | INFO     |  -- lfn=log.45743349._042848.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 21:49:05] 2025-07-27 01:48:26,456 | INFO     | stage-out finished correctly
[2025-07-26 21:49:05] 2025-07-27 01:48:26,523 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 21:49:05] 2025-07-27 01:48:26,582 | INFO     | job 6745354674 has state=finished
[2025-07-26 21:49:05] 2025-07-27 01:48:26,583 | INFO     | preparing for final server update for job 6745354674 in state='finished'
[2025-07-26 21:49:05] 2025-07-27 01:48:26,583 | INFO     | this job has now completed (state=finished)
[2025-07-26 21:49:05] 2025-07-27 01:48:26,583 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 21:49:05] 2025-07-27 01:48:26,584 | INFO     | log transfer has been attempted: DONE
[2025-07-26 21:49:05] 2025-07-27 01:48:26,584 | INFO     | job 6745354674 has finished - writing final server update
[2025-07-26 21:49:05] 2025-07-27 01:48:26,584 | INFO     | total number of processed events: 400 (read)
[2025-07-26 21:49:05] 2025-07-27 01:48:26,585 | INFO     | executing command: lscpu
[2025-07-26 21:49:05] 2025-07-27 01:48:26,655 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 21:49:05] 2025-07-27 01:48:28,233 | INFO     | monitor loop #405: job 0:6745354674 is in state 'finished'
[2025-07-26 21:49:05] 2025-07-27 01:48:28,234 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 21:49:05] 2025-07-27 01:48:30,238 | INFO     | PID=1725664 has CPU usage=14.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-26 21:49:05] 2025-07-27 01:48:30,238 | INFO     | .. there are 19 such processes running
[2025-07-26 21:49:05] 2025-07-27 01:48:30,737 | INFO     | monitor loop #406: job 0:6745354674 is in state 'finished'
[2025-07-26 21:49:05] 2025-07-27 01:48:30,737 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 21:49:05] 2025-07-27 01:48:31,389 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 21:49:05] 2025-07-27 01:48:31,395 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3040.0412500000007
[2025-07-26 21:49:05] 2025-07-27 01:48:31,407 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6745354674/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 21:49:05] 2025-07-27 01:48:31,408 | INFO     | extracted standard info from prmon json
[2025-07-26 21:49:05] 2025-07-27 01:48:31,408 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 21:49:05] 2025-07-27 01:48:31,408 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 21:49:05] 2025-07-27 01:48:31,408 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 21:49:05] 2025-07-27 01:48:31,408 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 21:49:05] 2025-07-27 01:48:31,410 | INFO     | fitting pss+swap vs Time
[2025-07-26 21:49:05] 2025-07-27 01:48:31,410 | INFO     | sum of square deviations: 226022842.5
[2025-07-26 21:49:05] 2025-07-27 01:48:31,410 | INFO     | sum of deviations: 3658855731.4999948
[2025-07-26 21:49:05] 2025-07-27 01:48:31,410 | INFO     | mean x: 1753578056.5
[2025-07-26 21:49:05] 2025-07-27 01:48:31,410 | INFO     | mean y: 2166678.988888889
[2025-07-26 21:49:05] 2025-07-27 01:48:31,411 | INFO     | -- intersect: -28384739050.053288
[2025-07-26 21:49:05] 2025-07-27 01:48:31,411 | INFO     | intersect: -28384739050.053288
[2025-07-26 21:49:05] 2025-07-27 01:48:31,411 | INFO     | chi2: 0.023081565524068533
[2025-07-26 21:49:05] 2025-07-27 01:48:31,411 | INFO     | -- intersect: -28384739050.053288
[2025-07-26 21:49:05] 2025-07-27 01:48:31,411 | INFO     | current memory leak: 16.19 B/s (using 90 data points, chi2=0.02)
[2025-07-26 21:49:05] 2025-07-27 01:48:31,411 | INFO     | could have reported an average CPU frequency of 2986 MHz (7 samples)
[2025-07-26 21:49:05] 2025-07-27 01:48:31,411 | INFO     | ..............................
[2025-07-26 21:49:05] 2025-07-27 01:48:31,411 | INFO     | . Timing measurements:
[2025-07-26 21:49:05] 2025-07-27 01:48:31,411 | INFO     | . get job = 0 s
[2025-07-26 21:49:05] 2025-07-27 01:48:31,411 | INFO     | . initial setup = 3 s
[2025-07-26 21:49:05] 2025-07-27 01:48:31,412 | INFO     | . payload setup = 14 s
[2025-07-26 21:49:05] 2025-07-27 01:48:31,412 | INFO     | . stage-in = 0 s
[2025-07-26 21:49:05] 2025-07-27 01:48:31,412 | INFO     | . payload execution = 5873 s
[2025-07-26 21:49:05] 2025-07-27 01:48:31,412 | INFO     | . stage-out = 0 s
[2025-07-26 21:49:05] 2025-07-27 01:48:31,412 | INFO     | . log creation = 0 s
[2025-07-26 21:49:05] 2025-07-27 01:48:31,412 | INFO     | ..............................
[2025-07-26 21:49:05] 2025-07-27 01:48:31,480 | INFO     | 
[2025-07-26 21:49:05] 2025-07-27 01:48:31,481 | INFO     | job summary report
[2025-07-26 21:49:05] 2025-07-27 01:48:31,481 | INFO     | --------------------------------------------------
[2025-07-26 21:49:05] 2025-07-27 01:48:31,481 | INFO     | PanDA job id: 6745354674
[2025-07-26 21:49:05] 2025-07-27 01:48:31,481 | INFO     | task id: 45743349
[2025-07-26 21:49:05] 2025-07-27 01:48:31,482 | INFO     | errors: (none)
[2025-07-26 21:49:05] 2025-07-27 01:48:31,482 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 21:49:05] 2025-07-27 01:48:31,482 | INFO     | pilot state: finished 
[2025-07-26 21:49:05] 2025-07-27 01:48:31,482 | INFO     | transexitcode: 0
[2025-07-26 21:49:05] 2025-07-27 01:48:31,482 | INFO     | exeerrorcode: 0
[2025-07-26 21:49:05] 2025-07-27 01:48:31,482 | INFO     | exeerrordiag: 
[2025-07-26 21:49:05] 2025-07-27 01:48:31,483 | INFO     | exitcode: 0
[2025-07-26 21:49:05] 2025-07-27 01:48:31,483 | INFO     | exitmsg: OK
[2025-07-26 21:49:05] 2025-07-27 01:48:31,483 | INFO     | cpuconsumptiontime: 38672 s
[2025-07-26 21:49:05] 2025-07-27 01:48:31,483 | INFO     | nevents: 400
[2025-07-26 21:49:05] 2025-07-27 01:48:31,483 | INFO     | neventsw: 0
[2025-07-26 21:49:05] 2025-07-27 01:48:31,483 | INFO     | pid: 1735687
[2025-07-26 21:49:05] 2025-07-27 01:48:31,483 | INFO     | pgrp: 1735687
[2025-07-26 21:49:05] 2025-07-27 01:48:31,483 | INFO     | corecount: 8
[2025-07-26 21:49:05] 2025-07-27 01:48:31,483 | INFO     | event service: False
[2025-07-26 21:49:05] 2025-07-27 01:48:31,483 | INFO     | sizes: {0: 2397424, 9: 2397686, 11: 2397714, 5891: 2424566, 5892: 2433564, 5893: 2433620, 5897: 2433942}
[2025-07-26 21:49:05] 2025-07-27 01:48:31,483 | INFO     | --------------------------------------------------
[2025-07-26 21:49:05] 2025-07-27 01:48:31,483 | INFO     | 
[2025-07-26 21:49:05] 2025-07-27 01:48:31,483 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-26 21:49:05] 2025-07-27 01:48:31,509 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 21:49:05] 2025-07-27 01:48:31,509 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 21:49:05] 2025-07-27 01:48:31,510 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 21:49:05] 2025-07-27 01:48:31,510 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 21:49:05] 2025-07-27 01:48:31,510 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 21:49:05] 2025-07-27 01:48:31,510 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 21:49:05] 2025-07-27 01:48:31,510 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 21:49:05] 2025-07-27 01:48:31,510 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 21:49:05] 2025-07-27 01:48:31,510 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 21:49:05] 2025-07-27 01:48:31,510 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 21:49:05] 2025-07-27 01:48:31,510 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 21:49:05] 2025-07-27 01:48:31,510 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 21:49:05] 2025-07-27 01:48:31,510 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 21:49:05] 2025-07-27 01:48:31,510 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 21:49:05] 2025-07-27 01:48:31,511 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 21:49:05] 2025-07-27 01:48:31,511 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 21:49:05] 2025-07-27 01:48:31,511 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 21:49:05] 2025-07-27 01:48:31,511 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 21:49:05] 2025-07-27 01:48:31,511 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 21:49:05] 2025-07-27 01:48:31,511 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 21:49:05] 2025-07-27 01:48:31,511 | INFO     | job 6745354674 has completed (purged errors)
[2025-07-26 21:49:05] 2025-07-27 01:48:31,511 | INFO     | overall cleanup function is called
[2025-07-26 21:49:05] 2025-07-27 01:48:32,519 | INFO     | --- collectZombieJob: --- 10, [1735687]
[2025-07-26 21:49:05] 2025-07-27 01:48:32,519 | INFO     | zombie collector waiting for pid 1735687
[2025-07-26 21:49:05] 2025-07-27 01:48:32,520 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 21:49:05] 2025-07-27 01:48:32,520 | INFO     | collected zombie processes
[2025-07-26 21:49:05] 2025-07-27 01:48:32,520 | INFO     | will attempt to kill all subprocesses of pid=1735687
[2025-07-26 21:49:05] 2025-07-27 01:48:32,909 | INFO     | process IDs to be killed: [1735687] (in reverse order)
[2025-07-26 21:49:05] 2025-07-27 01:48:33,049 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 21:49:05] 2025-07-27 01:48:33,049 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 21:49:05] 2025-07-27 01:48:33,066 | INFO     | did not find any defunct processes belonging to 1735687
[2025-07-26 21:49:05] 2025-07-27 01:48:33,081 | INFO     | did not find any defunct processes belonging to 1735687
[2025-07-26 21:49:05] 2025-07-27 01:48:33,081 | INFO     | ready for new job
[2025-07-26 21:49:05] 2025-07-27 01:48:33,081 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 21:49:05] 2025-07-27 01:48:33,084 | INFO     | ***************************************
[2025-07-26 21:49:05] 2025-07-27 01:48:33,084 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 21:49:05] 2025-07-27 01:48:33,084 | INFO     | ***************************************
[2025-07-26 21:49:05] 2025-07-27 01:48:33,084 | INFO     | 
[2025-07-26 21:49:05] 2025-07-27 01:48:33,102 | INFO     | architecture information:
[2025-07-26 21:49:05] 2025-07-27 01:48:33,102 | INFO     | executing command: cat /etc/os-release
[2025-07-26 21:49:05] 2025-07-27 01:48:33,122 | INFO     | cat /etc/os-release:
[2025-07-26 21:49:05] NAME="CentOS Linux"
[2025-07-26 21:49:05] VERSION="7 (Core)"
[2025-07-26 21:49:05] ID="centos"
[2025-07-26 21:49:05] ID_LIKE="rhel fedora"
[2025-07-26 21:49:05] VERSION_ID="7"
[2025-07-26 21:49:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 21:49:05] ANSI_COLOR="0;31"
[2025-07-26 21:49:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 21:49:05] HOME_URL="https://www.centos.org/"
[2025-07-26 21:49:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 21:49:05] 
[2025-07-26 21:49:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 21:49:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 21:49:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 21:49:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 21:49:05] 
[2025-07-26 21:49:05] 2025-07-27 01:48:33,122 | INFO     | ***************************************
[2025-07-26 21:49:05] 2025-07-27 01:48:33,625 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-26 21:49:05] 2025-07-27 01:48:33,645 | INFO     | sufficient remaining disk space (75665244160 B)
[2025-07-26 21:49:05] 2025-07-27 01:48:33,645 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 21:49:05] 2025-07-27 01:48:33,645 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 21:49:05] 2025-07-27 01:48:33,645 | INFO     | update_server=False
[2025-07-26 21:49:05] 2025-07-27 01:48:33,645 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 21:49:05] 2025-07-27 01:48:33,741 | INFO     | all job control threads have been joined
[2025-07-26 21:49:05] 2025-07-27 01:48:33,956 | INFO     | all data control threads have been joined
[2025-07-26 21:49:05] 2025-07-27 01:48:34,245 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 21:49:05] 2025-07-27 01:48:34,245 | INFO     | aborting loop
[2025-07-26 21:49:05] 2025-07-27 01:48:34,539 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 21:49:05] 2025-07-27 01:48:34,644 | INFO     | all payload control threads have been joined
[2025-07-26 21:49:05] 2025-07-27 01:48:34,651 | INFO     | [job] retrieve thread has finished
[2025-07-26 21:49:05] 2025-07-27 01:48:34,678 | INFO     | [job] validate thread has finished
[2025-07-26 21:49:05] 2025-07-27 01:48:34,746 | INFO     | [job] control thread has finished
[2025-07-26 21:49:05] 2025-07-27 01:48:34,961 | INFO     | [data] control thread has finished
[2025-07-26 21:49:05] 2025-07-27 01:48:34,996 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 21:49:05] 2025-07-27 01:48:35,010 | INFO     | [payload] failed_post thread has finished
[2025-07-26 21:49:05] 2025-07-27 01:48:35,219 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 21:49:05] 2025-07-27 01:48:35,249 | INFO     | [job] job monitor thread has finished
[2025-07-26 21:49:05] 2025-07-27 01:48:35,650 | INFO     | [payload] control thread has finished
[2025-07-26 21:49:05] 2025-07-27 01:48:35,654 | INFO     | [data] copytool_in thread has finished
[2025-07-26 21:49:05] 2025-07-27 01:48:35,906 | INFO     | [payload] validate_post thread has finished
[2025-07-26 21:49:05] 2025-07-27 01:48:36,050 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 21:49:05] 2025-07-27 01:48:36,487 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 21:49:05] 2025-07-27 01:48:36,544 | INFO     | [data] copytool_out thread has finished
[2025-07-26 21:49:05] 2025-07-27 01:48:37,091 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 21:49:05] 2025-07-27 01:48:37,493 | INFO     | [job] queue monitor thread has finished
[2025-07-26 21:49:05] 2025-07-27 01:48:41,097 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 21:49:05] 2025-07-27 01:48:44,112 | INFO     | job.realtimelogging is not enabled
[2025-07-26 21:49:05] 2025-07-27 01:48:45,122 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 21:49:05] 2025-07-27 01:48:46,635 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139631715813184)>', '<ExcThread(monitor, started 139630888331008)>']
[2025-07-26 21:49:05] 2025-07-27 01:48:51,660 | INFO     | all workflow threads have been joined
[2025-07-26 21:49:05] 2025-07-27 01:48:51,661 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 21:49:05] 2025-07-27 01:48:51,661 | INFO     | traces error code: 0
[2025-07-26 21:49:05] 2025-07-27 01:48:51,662 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 21:49:05] 2025-07-27 01:49:04,777 | INFO     | PID=1725664 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 21:49:05] 2025-07-27 01:49:04,778 | INFO     | .. there are 20 such processes running
[2025-07-26 21:49:05] 2025-07-27 01:49:04,779 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 21:49:05] 2025-07-27 01:49:04,779 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 21:49:05] 2025-07-27 01:49:04,779 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 21:49:05] 2025-07-27 01:49:04,779 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 21:49:05] 2025-07-27 01:49:04,779 | INFO     | [monitor] control thread has ended
[2025-07-26 21:49:05] 2025-07-27 01:49:04,946 [wrapper] ==== pilot stdout END ====
[2025-07-26 21:49:05] 2025-07-27 01:49:04,950 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 21:49:05] 2025-07-27 01:49:04,955 [wrapper] pilotpid: 1725664
[2025-07-26 21:49:05] 2025-07-27 01:49:04,957 [wrapper] Pilot exit status: 0
[2025-07-26 21:49:05] 2025-07-27 01:49:04,971 [wrapper] pandaids: 6745354674
[2025-07-26 21:49:05] 2025-07-27 01:49:05,074 [wrapper] cleanup supervisor_pilot 2048103 1725665
[2025-07-26 21:49:05] 2025-07-27 01:49:05,077 [wrapper] Test setup, not cleaning
[2025-07-26 21:49:05] 2025-07-27 01:49:05,080 [wrapper] apfmon messages muted
[2025-07-26 21:49:05] 2025-07-27 01:49:05,083 [wrapper] ==== wrapper stdout END ====
[2025-07-26 21:49:05] 2025-07-27 01:49:05,085 [wrapper] ==== wrapper stderr END ====
[2025-07-26 21:49:05]  *** Error codes and diagnostics ***
[2025-07-26 21:49:05]     "exeErrorCode": 0,
[2025-07-26 21:49:05]     "exeErrorDiag": "",
[2025-07-26 21:49:05]     "pilotErrorCode": 0,
[2025-07-26 21:49:05]     "pilotErrorDiag": "",
[2025-07-26 21:49:05]  *** Listing of results directory ***
[2025-07-26 21:49:05] total 352748
[2025-07-26 21:49:05] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 14:40 pilot3.tar.gz
[2025-07-26 21:49:05] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 15:01 queuedata.json
[2025-07-26 21:49:05] -rwx------. 1 boincer umatlas     36292 Jul 26 15:02 runpilot2-wrapper.sh
[2025-07-26 21:49:05] -rw-r--r--. 1 boincer umatlas       100 Jul 26 20:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 21:49:05] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 20:09 run_atlas
[2025-07-26 21:49:05] -rw-r--r--. 1 boincer umatlas       105 Jul 26 20:09 job.xml
[2025-07-26 21:49:05] -rw-r--r--. 2 boincer umatlas 144014558 Jul 26 20:09 EVNT.45743347._002421.pool.root.1
[2025-07-26 21:49:05] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 20:09 start_atlas.sh
[2025-07-26 21:49:05] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 20:09 shared
[2025-07-26 21:49:05] -rw-r--r--. 2 boincer umatlas    542894 Jul 26 20:09 input.tar.gz
[2025-07-26 21:49:05] -rw-r--r--. 1 boincer umatlas         0 Jul 26 20:09 boinc_lockfile
[2025-07-26 21:49:05] -rw-r--r--. 1 boincer umatlas      2562 Jul 26 20:09 pandaJob.out
[2025-07-26 21:49:05] -rw-------. 1 boincer umatlas    980117 Jul 26 20:09 agis_schedconf.cvmfs.json
[2025-07-26 21:49:05] -rw-------. 1 boincer umatlas   1593052 Jul 26 20:09 agis_ddmendpoints.agis.ALL.json
[2025-07-26 21:49:05] drwx------. 4 boincer umatlas      4096 Jul 26 20:09 pilot3
[2025-07-26 21:49:05] -rw-r--r--. 1 boincer umatlas      6931 Jul 26 21:45 init_data.xml
[2025-07-26 21:49:05] -rw-------. 1 boincer umatlas 211616078 Jul 26 21:47 HITS.45743349._042848.pool.root.1
[2025-07-26 21:49:05] -rw-r--r--. 1 boincer umatlas       529 Jul 26 21:48 boinc_task_state.xml
[2025-07-26 21:49:05] -rw-------. 1 boincer umatlas      1030 Jul 26 21:48 memory_monitor_summary.json
[2025-07-26 21:49:05] -rw-------. 1 boincer umatlas    305588 Jul 26 21:48 log.45743349._042848.job.log.tgz.1
[2025-07-26 21:49:05] -rw-------. 1 boincer umatlas      7768 Jul 26 21:48 heartbeat.json
[2025-07-26 21:49:05] -rw-r--r--. 1 boincer umatlas        27 Jul 26 21:49 wrapper_checkpoint.txt
[2025-07-26 21:49:05] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 21:49 boinc_mmap_file
[2025-07-26 21:49:05] -rw-------. 1 boincer umatlas       823 Jul 26 21:49 pilotlog.txt
[2025-07-26 21:49:05] -rw-------. 1 boincer umatlas        95 Jul 26 21:49 pilot_heartbeat.json
[2025-07-26 21:49:05] -rw-------. 1 boincer umatlas    550875 Jul 26 21:49 log.45743349._042848.job.log.1
[2025-07-26 21:49:05] -rw-------. 1 boincer umatlas       357 Jul 26 21:49 output.list
[2025-07-26 21:49:05] -rw-r--r--. 1 boincer umatlas       620 Jul 26 21:49 runtime_log
[2025-07-26 21:49:05] -rw-------. 1 boincer umatlas    870400 Jul 26 21:49 result.tar.gz
[2025-07-26 21:49:05] -rw-r--r--. 1 boincer umatlas      8655 Jul 26 21:49 runtime_log.err
[2025-07-26 21:49:05] -rw-------. 1 boincer umatlas       651 Jul 26 21:49 NeYMDmiLzz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8sSLDmEVp6Jm.diag
[2025-07-26 21:49:05] -rw-r--r--. 1 boincer umatlas     21730 Jul 26 21:49 stderr.txt
[2025-07-26 21:49:05] HITS file was successfully produced:
[2025-07-26 21:49:05] -rw-------. 1 boincer umatlas 211616078 Jul 26 21:47 shared/HITS.pool.root.1
[2025-07-26 21:49:05]  *** Contents of shared directory: ***
[2025-07-26 21:49:05] total 348704
[2025-07-26 21:49:05] -rw-r--r--. 2 boincer umatlas 144014558 Jul 26 20:09 ATLAS.root_0
[2025-07-26 21:49:05] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 20:09 start_atlas.sh
[2025-07-26 21:49:05] -rw-r--r--. 2 boincer umatlas    542894 Jul 26 20:09 input.tar.gz
[2025-07-26 21:49:05] -rw-------. 1 boincer umatlas 211616078 Jul 26 21:47 HITS.pool.root.1
[2025-07-26 21:49:05] -rw-------. 1 boincer umatlas    870400 Jul 26 21:49 result.tar.gz
21:49:06 (1720967): run_atlas exited; CPU time 38874.397060
21:49:06 (1720967): called boinc_finish(0)

</stderr_txt>
]]>

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