Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
19:58:35 (1826109): wrapper (7.7.26015): starting
19:58:35 (1826109): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 19:58:35] Arguments: --nthreads 12
[2025-07-27 19:58:35] Threads: 12
[2025-07-27 19:58:35] Checking for CVMFS
[2025-07-27 19:58:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 19:58:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 19:58:37] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 19:58:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 19:58:39] 2.13.1.0 50093 8082 74792 148822 2 57 3458006 4096001 1824 130560 0 16169306 99.996 294070 285 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-07-27 19:58:39] CVMFS is ok
[2025-07-27 19:58:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 19:58:39] Checking for apptainer binary...
[2025-07-27 19:58:39] apptainer is not installed, using version from CVMFS
[2025-07-27 19:58:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 19:58:42] ryzen7
[2025-07-27 19:58:42] apptainer works
[2025-07-27 19:58:42] Set ATHENA_PROC_NUMBER=12
[2025-07-27 19:58:42] Set ATHENA_CORE_NUMBER=12
[2025-07-27 19:58:43] Starting ATLAS job with PandaID=6745229474
[2025-07-27 19:58:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 21:29:35]  *** The last 200 lines of the pilot log: ***
[2025-07-27 21:29:35]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-27 21:29:35]  is_altstaged=None
[2025-07-27 21:29:35]  is_tar=False
[2025-07-27 21:29:35]  lfn=log.45743349._039439.job.log.tgz.1
[2025-07-27 21:29:35]  mtime=0
[2025-07-27 21:29:35]  protocol_id=None
[2025-07-27 21:29:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 21:29:35]  replicas=None
[2025-07-27 21:29:35]  scope=mc23_13p6TeV
[2025-07-27 21:29:35]  status=None
[2025-07-27 21:29:35]  status_code=0
[2025-07-27 21:29:35]  storage_token=
[2025-07-27 21:29:35]  surl=/opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6745229474/log.45743349._039439.job.log.tgz.1
[2025-07-27 21:29:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d2/56/log.45743349._039439.job.log.tgz.1
[2025-07-27 21:29:35]  workdir=None
[2025-07-27 21:29:35] ]
[2025-07-27 21:29:35] 2025-07-27 21:29:08,533 | INFO     | transferring file log.45743349._039439.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6745229474/log.45743349._039439.job.log.tgz.1 t
[2025-07-27 21:29:35] 2025-07-27 21:29:08,533 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6745229474/log.45743349._039439.job.log.tgz.1 /opt/boinc/instance_home
[2025-07-27 21:29:35] 2025-07-27 21:29:08,543 | INFO     | adding to output.list: log.45743349._039439.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d2/56/log.45743349._039439.job.log.tg
[2025-07-27 21:29:35] 2025-07-27 21:29:08,543 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 21:29:35] 2025-07-27 21:29:08,543 | INFO     | summary of transferred files:
[2025-07-27 21:29:35] 2025-07-27 21:29:08,543 | INFO     |  -- lfn=log.45743349._039439.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 21:29:35] 2025-07-27 21:29:08,544 | INFO     | stage-out finished correctly
[2025-07-27 21:29:35] 2025-07-27 21:29:09,654 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 21:29:35] 2025-07-27 21:29:10,716 | INFO     | monitor loop #401: job 0:6745229474 is in state 'finished'
[2025-07-27 21:29:35] 2025-07-27 21:29:10,717 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 21:29:35] 2025-07-27 21:29:11,712 | INFO     | job 6745229474 has state=finished
[2025-07-27 21:29:35] 2025-07-27 21:29:11,712 | INFO     | preparing for final server update for job 6745229474 in state='finished'
[2025-07-27 21:29:35] 2025-07-27 21:29:11,712 | INFO     | this job has now completed (state=finished)
[2025-07-27 21:29:35] 2025-07-27 21:29:11,712 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 21:29:35] 2025-07-27 21:29:11,713 | INFO     | log transfer has been attempted: DONE
[2025-07-27 21:29:35] 2025-07-27 21:29:11,713 | INFO     | job 6745229474 has finished - writing final server update
[2025-07-27 21:29:35] 2025-07-27 21:29:11,713 | INFO     | total number of processed events: 400 (read)
[2025-07-27 21:29:35] 2025-07-27 21:29:11,713 | INFO     | executing command: lscpu
[2025-07-27 21:29:35] 2025-07-27 21:29:11,746 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 21:29:35] 2025-07-27 21:29:13,220 | INFO     | monitor loop #402: job 0:6745229474 is in state 'finished'
[2025-07-27 21:29:35] 2025-07-27 21:29:13,220 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 21:29:35] 2025-07-27 21:29:15,666 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 21:29:35] 2025-07-27 21:29:15,668 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4137.1941875
[2025-07-27 21:29:35] 2025-07-27 21:29:15,670 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6745229474/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 21:29:35] 2025-07-27 21:29:15,671 | INFO     | extracted standard info from prmon json
[2025-07-27 21:29:35] 2025-07-27 21:29:15,671 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 21:29:35] 2025-07-27 21:29:15,671 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 21:29:35] 2025-07-27 21:29:15,671 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 21:29:35] 2025-07-27 21:29:15,671 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 21:29:35] 2025-07-27 21:29:15,673 | INFO     | fitting pss+swap vs Time
[2025-07-27 21:29:35] 2025-07-27 21:29:15,673 | INFO     | sum of square deviations: 170944600.5
[2025-07-27 21:29:35] 2025-07-27 21:29:15,673 | INFO     | sum of deviations: -2697836386.0000005
[2025-07-27 21:29:35] 2025-07-27 21:29:15,673 | INFO     | mean x: 1753649145.5
[2025-07-27 21:29:35] 2025-07-27 21:29:15,673 | INFO     | mean y: 2698265.43902439
[2025-07-27 21:29:35] 2025-07-27 21:29:15,673 | INFO     | -- intersect: 27678673167.072193
[2025-07-27 21:29:35] 2025-07-27 21:29:15,673 | INFO     | intersect: 27678673167.072193
[2025-07-27 21:29:35] 2025-07-27 21:29:15,674 | INFO     | chi2: 0.013572304935630518
[2025-07-27 21:29:35] 2025-07-27 21:29:15,674 | INFO     | -- intersect: 27678673167.072193
[2025-07-27 21:29:35] 2025-07-27 21:29:15,674 | INFO     | current memory leak: -15.78 B/s (using 82 data points, chi2=0.01)
[2025-07-27 21:29:35] 2025-07-27 21:29:15,674 | INFO     | could have reported an average CPU frequency of 4100 MHz (6 samples)
[2025-07-27 21:29:35] 2025-07-27 21:29:15,674 | INFO     | ..............................
[2025-07-27 21:29:35] 2025-07-27 21:29:15,674 | INFO     | . Timing measurements:
[2025-07-27 21:29:35] 2025-07-27 21:29:15,674 | INFO     | . get job = 0 s
[2025-07-27 21:29:35] 2025-07-27 21:29:15,674 | INFO     | . initial setup = 1 s
[2025-07-27 21:29:35] 2025-07-27 21:29:15,674 | INFO     | . payload setup = 3 s
[2025-07-27 21:29:35] 2025-07-27 21:29:15,674 | INFO     | . stage-in = 0 s
[2025-07-27 21:29:35] 2025-07-27 21:29:15,674 | INFO     | . payload execution = 5378 s
[2025-07-27 21:29:35] 2025-07-27 21:29:15,674 | INFO     | . stage-out = 0 s
[2025-07-27 21:29:35] 2025-07-27 21:29:15,674 | INFO     | . log creation = 0 s
[2025-07-27 21:29:35] 2025-07-27 21:29:15,675 | INFO     | ..............................
[2025-07-27 21:29:35] 2025-07-27 21:29:15,737 | INFO     | 
[2025-07-27 21:29:35] 2025-07-27 21:29:15,737 | INFO     | job summary report
[2025-07-27 21:29:35] 2025-07-27 21:29:15,737 | INFO     | --------------------------------------------------
[2025-07-27 21:29:35] 2025-07-27 21:29:15,737 | INFO     | PanDA job id: 6745229474
[2025-07-27 21:29:35] 2025-07-27 21:29:15,737 | INFO     | task id: 45743349
[2025-07-27 21:29:35] 2025-07-27 21:29:15,737 | INFO     | errors: (none)
[2025-07-27 21:29:35] 2025-07-27 21:29:15,737 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 21:29:35] 2025-07-27 21:29:15,737 | INFO     | pilot state: finished 
[2025-07-27 21:29:35] 2025-07-27 21:29:15,737 | INFO     | transexitcode: 0
[2025-07-27 21:29:35] 2025-07-27 21:29:15,737 | INFO     | exeerrorcode: 0
[2025-07-27 21:29:35] 2025-07-27 21:29:15,737 | INFO     | exeerrordiag: 
[2025-07-27 21:29:35] 2025-07-27 21:29:15,737 | INFO     | exitcode: 0
[2025-07-27 21:29:35] 2025-07-27 21:29:15,737 | INFO     | exitmsg: OK
[2025-07-27 21:29:35] 2025-07-27 21:29:15,737 | INFO     | cpuconsumptiontime: 28995 s
[2025-07-27 21:29:35] 2025-07-27 21:29:15,737 | INFO     | nevents: 400
[2025-07-27 21:29:35] 2025-07-27 21:29:15,737 | INFO     | neventsw: 0
[2025-07-27 21:29:35] 2025-07-27 21:29:15,738 | INFO     | pid: 1836384
[2025-07-27 21:29:35] 2025-07-27 21:29:15,738 | INFO     | pgrp: 1836384
[2025-07-27 21:29:35] 2025-07-27 21:29:15,738 | INFO     | corecount: 12
[2025-07-27 21:29:35] 2025-07-27 21:29:15,738 | INFO     | event service: False
[2025-07-27 21:29:35] 2025-07-27 21:29:15,738 | INFO     | sizes: {0: 2397498, 3: 2397760, 11: 2397788, 5386: 2424449, 5387: 2433493, 5388: 2433549, 5394: 2433871}
[2025-07-27 21:29:35] 2025-07-27 21:29:15,738 | INFO     | --------------------------------------------------
[2025-07-27 21:29:35] 2025-07-27 21:29:15,738 | INFO     | 
[2025-07-27 21:29:35] 2025-07-27 21:29:15,738 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-07-27 21:29:35] 2025-07-27 21:29:15,748 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 21:29:35] 2025-07-27 21:29:15,748 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 21:29:35] 2025-07-27 21:29:15,749 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 21:29:35] 2025-07-27 21:29:15,749 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 21:29:35] 2025-07-27 21:29:15,749 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 21:29:35] 2025-07-27 21:29:15,749 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 21:29:35] 2025-07-27 21:29:15,749 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 21:29:35] 2025-07-27 21:29:15,749 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 21:29:35] 2025-07-27 21:29:15,749 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 21:29:35] 2025-07-27 21:29:15,749 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 21:29:35] 2025-07-27 21:29:15,749 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 21:29:35] 2025-07-27 21:29:15,749 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 21:29:35] 2025-07-27 21:29:15,749 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 21:29:35] 2025-07-27 21:29:15,749 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 21:29:35] 2025-07-27 21:29:15,749 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 21:29:35] 2025-07-27 21:29:15,749 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 21:29:35] 2025-07-27 21:29:15,750 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 21:29:35] 2025-07-27 21:29:15,750 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 21:29:35] 2025-07-27 21:29:15,750 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 21:29:35] 2025-07-27 21:29:15,750 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 21:29:35] 2025-07-27 21:29:15,750 | INFO     | job 6745229474 has completed (purged errors)
[2025-07-27 21:29:35] 2025-07-27 21:29:15,750 | INFO     | overall cleanup function is called
[2025-07-27 21:29:35] 2025-07-27 21:29:16,754 | INFO     | --- collectZombieJob: --- 10, [1836384]
[2025-07-27 21:29:35] 2025-07-27 21:29:16,754 | INFO     | zombie collector waiting for pid 1836384
[2025-07-27 21:29:35] 2025-07-27 21:29:16,754 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 21:29:35] 2025-07-27 21:29:16,754 | INFO     | collected zombie processes
[2025-07-27 21:29:35] 2025-07-27 21:29:16,754 | INFO     | will attempt to kill all subprocesses of pid=1836384
[2025-07-27 21:29:35] 2025-07-27 21:29:16,826 | INFO     | process IDs to be killed: [1836384] (in reverse order)
[2025-07-27 21:29:35] 2025-07-27 21:29:16,854 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 21:29:35] 2025-07-27 21:29:16,855 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 21:29:35] 2025-07-27 21:29:16,856 | INFO     | did not find any defunct processes belonging to 1836384
[2025-07-27 21:29:35] 2025-07-27 21:29:16,858 | INFO     | did not find any defunct processes belonging to 1836384
[2025-07-27 21:29:35] 2025-07-27 21:29:16,858 | INFO     | ready for new job
[2025-07-27 21:29:35] 2025-07-27 21:29:16,858 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 21:29:35] 2025-07-27 21:29:16,859 | INFO     | ***************************************
[2025-07-27 21:29:35] 2025-07-27 21:29:16,859 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 21:29:35] 2025-07-27 21:29:16,859 | INFO     | ***************************************
[2025-07-27 21:29:35] 2025-07-27 21:29:16,860 | INFO     | 
[2025-07-27 21:29:35] 2025-07-27 21:29:16,878 | INFO     | architecture information:
[2025-07-27 21:29:35] 2025-07-27 21:29:16,879 | INFO     | executing command: cat /etc/os-release
[2025-07-27 21:29:35] 2025-07-27 21:29:16,886 | INFO     | cat /etc/os-release:
[2025-07-27 21:29:35] NAME="CentOS Linux"
[2025-07-27 21:29:35] VERSION="7 (Core)"
[2025-07-27 21:29:35] ID="centos"
[2025-07-27 21:29:35] ID_LIKE="rhel fedora"
[2025-07-27 21:29:35] VERSION_ID="7"
[2025-07-27 21:29:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 21:29:35] ANSI_COLOR="0;31"
[2025-07-27 21:29:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 21:29:35] HOME_URL="https://www.centos.org/"
[2025-07-27 21:29:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 21:29:35] 
[2025-07-27 21:29:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 21:29:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 21:29:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 21:29:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 21:29:35] 
[2025-07-27 21:29:35] 2025-07-27 21:29:16,886 | INFO     | ***************************************
[2025-07-27 21:29:35] 2025-07-27 21:29:17,388 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-07-27 21:29:35] 2025-07-27 21:29:17,396 | INFO     | sufficient remaining disk space (149919105024 B)
[2025-07-27 21:29:35] 2025-07-27 21:29:17,397 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 21:29:35] 2025-07-27 21:29:17,397 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 21:29:35] 2025-07-27 21:29:17,397 | INFO     | update_server=False
[2025-07-27 21:29:35] 2025-07-27 21:29:17,397 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 21:29:35] 2025-07-27 21:29:17,397 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-27 21:29:35] 2025-07-27 21:29:17,397 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 21:29:35] 2025-07-27 21:29:17,397 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 21:29:35] 2025-07-27 21:29:17,397 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 21:29:35] 2025-07-27 21:29:17,398 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 21:29:35] 2025-07-27 21:29:17,398 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 21:29:35] 2025-07-27 21:29:17,398 | INFO     | aborting loop
[2025-07-27 21:29:35] 2025-07-27 21:29:17,398 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 21:29:35] 2025-07-27 21:29:18,033 | INFO     | all data control threads have been joined
[2025-07-27 21:29:35] 2025-07-27 21:29:18,174 | INFO     | all job control threads have been joined
[2025-07-27 21:29:35] 2025-07-27 21:29:18,402 | INFO     | [job] job monitor thread has finished
[2025-07-27 21:29:35] 2025-07-27 21:29:18,402 | INFO     | [job] queue monitor thread has finished
[2025-07-27 21:29:35] 2025-07-27 21:29:18,402 | INFO     | [job] retrieve thread has finished
[2025-07-27 21:29:35] 2025-07-27 21:29:18,418 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 21:29:35] 2025-07-27 21:29:18,534 | INFO     | all payload control threads have been joined
[2025-07-27 21:29:35] 2025-07-27 21:29:18,738 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 21:29:35] 2025-07-27 21:29:18,830 | INFO     | [payload] failed_post thread has finished
[2025-07-27 21:29:35] 2025-07-27 21:29:19,038 | INFO     | [data] control thread has finished
[2025-07-27 21:29:35] 2025-07-27 21:29:19,090 | INFO     | [data] copytool_in thread has finished
[2025-07-27 21:29:35] 2025-07-27 21:29:19,178 | INFO     | [job] control thread has finished
[2025-07-27 21:29:35] 2025-07-27 21:29:19,366 | INFO     | [payload] validate_post thread has finished
[2025-07-27 21:29:35] 2025-07-27 21:29:19,402 | INFO     | [data] copytool_out thread has finished
[2025-07-27 21:29:35] 2025-07-27 21:29:19,514 | INFO     | [job] validate thread has finished
[2025-07-27 21:29:35] 2025-07-27 21:29:19,538 | INFO     | [payload] control thread has finished
[2025-07-27 21:29:35] 2025-07-27 21:29:19,738 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 21:29:35] 2025-07-27 21:29:20,234 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 21:29:35] 2025-07-27 21:29:24,239 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 21:29:35] 2025-07-27 21:29:28,102 | INFO     | job.realtimelogging is not enabled
[2025-07-27 21:29:35] 2025-07-27 21:29:29,106 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 21:29:35] 2025-07-27 21:29:30,701 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139635614013248)>', '<ExcThread(monitor, started 139635309123328)>']
[2025-07-27 21:29:35] 2025-07-27 21:29:31,454 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 21:29:35] 2025-07-27 21:29:31,454 | INFO     | [monitor] control thread has ended
[2025-07-27 21:29:35] 2025-07-27 21:29:35,726 | INFO     | all workflow threads have been joined
[2025-07-27 21:29:35] 2025-07-27 21:29:35,726 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 21:29:35] 2025-07-27 21:29:35,726 | INFO     | traces error code: 0
[2025-07-27 21:29:35] 2025-07-27 21:29:35,726 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 21:29:35] 2025-07-27 21:29:35,776 [wrapper] ==== pilot stdout END ====
[2025-07-27 21:29:35] 2025-07-27 21:29:35,778 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 21:29:35] 2025-07-27 21:29:35,779 [wrapper] pilotpid: 1829799
[2025-07-27 21:29:35] 2025-07-27 21:29:35,781 [wrapper] Pilot exit status: 0
[2025-07-27 21:29:35] 2025-07-27 21:29:35,787 [wrapper] pandaids: 6745229474
[2025-07-27 21:29:35] 2025-07-27 21:29:35,804 [wrapper] cleanup supervisor_pilot 1895872 1829800
[2025-07-27 21:29:35] 2025-07-27 21:29:35,806 [wrapper] Test setup, not cleaning
[2025-07-27 21:29:35] 2025-07-27 21:29:35,808 [wrapper] apfmon messages muted
[2025-07-27 21:29:35] 2025-07-27 21:29:35,809 [wrapper] ==== wrapper stdout END ====
[2025-07-27 21:29:35] 2025-07-27 21:29:35,811 [wrapper] ==== wrapper stderr END ====
[2025-07-27 21:29:35]  *** Error codes and diagnostics ***
[2025-07-27 21:29:35]     "exeErrorCode": 0,
[2025-07-27 21:29:35]     "exeErrorDiag": "",
[2025-07-27 21:29:35]     "pilotErrorCode": 0,
[2025-07-27 21:29:35]     "pilotErrorDiag": "",
[2025-07-27 21:29:35]  *** Listing of results directory ***
[2025-07-27 21:29:35] total 435740
[2025-07-27 21:29:35] -rw-r--r-- 1 boinc boinc    530466 Jul 26 14:25 pilot3.tar.gz
[2025-07-27 21:29:35] -rw-r--r-- 1 boinc boinc      5112 Jul 26 14:37 queuedata.json
[2025-07-27 21:29:35] -rwx------ 1 boinc boinc     36292 Jul 26 14:37 runpilot2-wrapper.sh
[2025-07-27 21:29:35] -rw-rw-r-- 1 boinc boinc       100 Jul 27 19:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 21:29:35] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 19:58 run_atlas
[2025-07-27 21:29:35] -rw-rw-r-- 1 boinc boinc       105 Jul 27 19:58 job.xml
[2025-07-27 21:29:35] -rw-rw-r-- 1 boinc boinc      9702 Jul 27 19:58 init_data.xml
[2025-07-27 21:29:35] -rw-r--r-- 2 boinc boinc 228084389 Jul 27 19:58 EVNT.45743347._002249.pool.root.1
[2025-07-27 21:29:35] -rw-r--r-- 2 boinc boinc     15095 Jul 27 19:58 start_atlas.sh
[2025-07-27 21:29:35] drwxrwx--x 2 boinc boinc      4096 Jul 27 19:58 shared
[2025-07-27 21:29:35] -rw-r--r-- 2 boinc boinc    542897 Jul 27 19:58 input.tar.gz
[2025-07-27 21:29:35] -rw-rw-r-- 1 boinc boinc         0 Jul 27 19:58 boinc_lockfile
[2025-07-27 21:29:35] -rw-rw-r-- 1 boinc boinc      2563 Jul 27 19:58 pandaJob.out
[2025-07-27 21:29:35] -rw------- 1 boinc boinc    980125 Jul 27 19:59 agis_schedconf.cvmfs.json
[2025-07-27 21:29:35] -rw------- 1 boinc boinc   1593052 Jul 27 19:59 agis_ddmendpoints.agis.ALL.json
[2025-07-27 21:29:35] drwx------ 4 boinc boinc      4096 Jul 27 19:59 pilot3
[2025-07-27 21:29:35] -rw------- 1 boinc boinc        95 Jul 27 21:28 pilot_heartbeat.json
[2025-07-27 21:29:35] -rw------- 1 boinc boinc 212363399 Jul 27 21:28 HITS.45743349._039439.pool.root.1
[2025-07-27 21:29:35] -rw-rw-r-- 1 boinc boinc       529 Jul 27 21:28 boinc_task_state.xml
[2025-07-27 21:29:35] -rw------- 1 boinc boinc      1017 Jul 27 21:29 memory_monitor_summary.json
[2025-07-27 21:29:35] -rw------- 1 boinc boinc    385789 Jul 27 21:29 log.45743349._039439.job.log.tgz.1
[2025-07-27 21:29:35] -rw-rw-r-- 1 boinc boinc        27 Jul 27 21:29 wrapper_checkpoint.txt
[2025-07-27 21:29:35] -rw-rw-r-- 1 boinc boinc      8192 Jul 27 21:29 boinc_mmap_file
[2025-07-27 21:29:35] -rw------- 1 boinc boinc      7735 Jul 27 21:29 heartbeat.json
[2025-07-27 21:29:35] -rw------- 1 boinc boinc      4576 Jul 27 21:29 pilotlog.txt
[2025-07-27 21:29:35] -rw------- 1 boinc boinc    543255 Jul 27 21:29 log.45743349._039439.job.log.1
[2025-07-27 21:29:35] -rw------- 1 boinc boinc       357 Jul 27 21:29 output.list
[2025-07-27 21:29:35] -rw-rw-r-- 1 boinc boinc       620 Jul 27 21:29 runtime_log
[2025-07-27 21:29:35] -rw------- 1 boinc boinc    952320 Jul 27 21:29 result.tar.gz
[2025-07-27 21:29:35] -rw------- 1 boinc boinc       649 Jul 27 21:29 VJqLDmnCvz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmsu0KDmTwDqln.diag
[2025-07-27 21:29:35] -rw-rw-r-- 1 boinc boinc      8954 Jul 27 21:29 runtime_log.err
[2025-07-27 21:29:35] -rw-rw-r-- 1 boinc boinc     21185 Jul 27 21:29 stderr.txt
[2025-07-27 21:29:35] HITS file was successfully produced:
[2025-07-27 21:29:35] -rw------- 1 boinc boinc 212363399 Jul 27 21:28 shared/HITS.pool.root.1
[2025-07-27 21:29:35]  *** Contents of shared directory: ***
[2025-07-27 21:29:35] total 431616
[2025-07-27 21:29:35] -rw-r--r-- 2 boinc boinc 228084389 Jul 27 19:58 ATLAS.root_0
[2025-07-27 21:29:35] -rw-r--r-- 2 boinc boinc     15095 Jul 27 19:58 start_atlas.sh
[2025-07-27 21:29:35] -rw-r--r-- 2 boinc boinc    542897 Jul 27 19:58 input.tar.gz
[2025-07-27 21:29:35] -rw------- 1 boinc boinc 212363399 Jul 27 21:28 HITS.pool.root.1
[2025-07-27 21:29:35] -rw------- 1 boinc boinc    952320 Jul 27 21:29 result.tar.gz
21:29:37 (1826109): run_atlas exited; CPU time 29013.983382
21:29:37 (1826109): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN