Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:08:34 (1744456): wrapper (7.7.26015): starting
20:08:34 (1744456): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 20:08:34] Arguments: --nthreads 8
[2025-07-26 20:08:34] Threads: 8
[2025-07-26 20:08:34] Checking for CVMFS
[2025-07-26 20:08:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 20:08:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 20:08:34] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 20:08:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 20:08:34] 2.12.6.0 2498914 17623 440864 148793 0 373 27323267 32935936 15532 16776704 0 55293307 99.586 90563857 18853 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 20:08:34] CVMFS is ok
[2025-07-26 20:08:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 20:08:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 20:08:34] Further information can be found at the LHC@home message board.
[2025-07-26 20:08:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 20:08:34] Checking for apptainer binary...
[2025-07-26 20:08:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 20:08:34] Running /usr/bin/apptainer --version
[2025-07-26 20:08:34] apptainer version 1.4.1-1.el9
[2025-07-26 20:08:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 20:08:34] c6-2-11-3.aglt2.org
[2025-07-26 20:08:34] apptainer works
[2025-07-26 20:08:34] Set ATHENA_PROC_NUMBER=8
[2025-07-26 20:08:34] Set ATHENA_CORE_NUMBER=8
[2025-07-26 20:08:35] Starting ATLAS job with PandaID=6745354507
[2025-07-26 20:08:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 22:10:37]  *** The last 200 lines of the pilot log: ***
[2025-07-26 22:10:37] 2025-07-27 02:10:16,946 | INFO     | fitting pss+swap vs Time
[2025-07-26 22:10:37] 2025-07-27 02:10:16,947 | INFO     | sum of square deviations: 522502820.0
[2025-07-26 22:10:37] 2025-07-27 02:10:16,947 | INFO     | sum of deviations: 21553471660.999996
[2025-07-26 22:10:37] 2025-07-27 02:10:16,947 | INFO     | mean x: 1753578567.0
[2025-07-26 22:10:37] 2025-07-27 02:10:16,947 | INFO     | mean y: 2111829.7394957985
[2025-07-26 22:10:37] 2025-07-27 02:10:16,947 | INFO     | -- intersect: -72333777092.68102
[2025-07-26 22:10:37] 2025-07-27 02:10:16,947 | INFO     | intersect: -72333777092.68102
[2025-07-26 22:10:37] 2025-07-27 02:10:16,948 | INFO     | chi2: 1.4798109634502128
[2025-07-26 22:10:37] 2025-07-27 02:10:16,948 | INFO     | sum of square deviations: 459366752.5
[2025-07-26 22:10:37] 2025-07-27 02:10:16,948 | INFO     | sum of deviations: 21018683715.500004
[2025-07-26 22:10:37] 2025-07-27 02:10:16,948 | INFO     | mean x: 1753578414.5
[2025-07-26 22:10:37] 2025-07-27 02:10:16,949 | INFO     | mean y: 2110530.289473684
[2025-07-26 22:10:37] 2025-07-27 02:10:16,949 | INFO     | -- intersect: -80234236275.63977
[2025-07-26 22:10:37] 2025-07-27 02:10:16,949 | INFO     | intersect: -80234236275.63977
[2025-07-26 22:10:37] 2025-07-27 02:10:16,949 | INFO     | chi2: 1.46411680843304
[2025-07-26 22:10:37] 2025-07-27 02:10:16,949 | INFO     | current chi2=1.46411680843304 (change=1.0605513410024665 %)
[2025-07-26 22:10:37] 2025-07-27 02:10:16,949 | INFO     | right removable region: 113
[2025-07-26 22:10:37] 2025-07-27 02:10:16,949 | INFO     | sum of square deviations: 459366752.5
[2025-07-26 22:10:37] 2025-07-27 02:10:16,950 | INFO     | sum of deviations: 5313357481.0
[2025-07-26 22:10:37] 2025-07-27 02:10:16,950 | INFO     | mean x: 1753578719.5
[2025-07-26 22:10:37] 2025-07-27 02:10:16,950 | INFO     | mean y: 2150424.4736842103
[2025-07-26 22:10:37] 2025-07-27 02:10:16,950 | INFO     | -- intersect: -20280968797.955734
[2025-07-26 22:10:37] 2025-07-27 02:10:16,950 | INFO     | intersect: -20280968797.955734
[2025-07-26 22:10:37] 2025-07-27 02:10:16,950 | INFO     | chi2: 0.06751736283123685
[2025-07-26 22:10:37] 2025-07-27 02:10:16,951 | INFO     | current chi2=0.06751736283123685 (change=95.43743326013625 %)
[2025-07-26 22:10:37] 2025-07-27 02:10:16,951 | INFO     | sum of square deviations: 401533110.0
[2025-07-26 22:10:37] 2025-07-27 02:10:16,951 | INFO     | sum of deviations: 3011231876.9999995
[2025-07-26 22:10:37] 2025-07-27 02:10:16,951 | INFO     | mean x: 1753578872.0
[2025-07-26 22:10:37] 2025-07-27 02:10:16,952 | INFO     | mean y: 2156445.4128440367
[2025-07-26 22:10:37] 2025-07-27 02:10:16,952 | INFO     | -- intersect: -13148521460.576284
[2025-07-26 22:10:37] 2025-07-27 02:10:16,952 | INFO     | intersect: -13148521460.576284
[2025-07-26 22:10:37] 2025-07-27 02:10:16,952 | INFO     | chi2: 0.05019653735041123
[2025-07-26 22:10:37] 2025-07-27 02:10:16,952 | INFO     | current chi2=0.05019653735041123 (change=25.65388331905073 %)
[2025-07-26 22:10:37] 2025-07-27 02:10:16,952 | INFO     | sum of square deviations: 348769330.0
[2025-07-26 22:10:37] 2025-07-27 02:10:16,953 | INFO     | sum of deviations: 1687839621.9999995
[2025-07-26 22:10:37] 2025-07-27 02:10:16,953 | INFO     | mean x: 1753579024.5
[2025-07-26 22:10:37] 2025-07-27 02:10:16,953 | INFO     | mean y: 2160298.576923077
[2025-07-26 22:10:37] 2025-07-27 02:10:16,953 | INFO     | -- intersect: -8484136813.210997
[2025-07-26 22:10:37] 2025-07-27 02:10:16,953 | INFO     | intersect: -8484136813.210997
[2025-07-26 22:10:37] 2025-07-27 02:10:16,953 | INFO     | chi2: 0.043746025263784766
[2025-07-26 22:10:37] 2025-07-27 02:10:16,954 | INFO     | current chi2=0.043746025263784766 (change=12.850512061413369 %)
[2025-07-26 22:10:37] 2025-07-27 02:10:16,957 | INFO     | left removable region: 30
[2025-07-26 22:10:37] 2025-07-27 02:10:16,957 | INFO     | sum of square deviations: 177275882.0
[2025-07-26 22:10:37] 2025-07-27 02:10:16,958 | INFO     | sum of deviations: 860839930.0
[2025-07-26 22:10:37] 2025-07-27 02:10:16,958 | INFO     | mean x: 1753579299.0
[2025-07-26 22:10:37] 2025-07-27 02:10:16,958 | INFO     | mean y: 2166449.0722891567
[2025-07-26 22:10:37] 2025-07-27 02:10:16,958 | INFO     | -- intersect: -8513098368.510788
[2025-07-26 22:10:37] 2025-07-27 02:10:16,958 | INFO     | intersect: -8513098368.510788
[2025-07-26 22:10:37] 2025-07-27 02:10:16,958 | INFO     | chi2: 0.026285422425747974
[2025-07-26 22:10:37] 2025-07-27 02:10:16,958 | INFO     | -- intersect: -8513098368.510788
[2025-07-26 22:10:37] 2025-07-27 02:10:16,959 | INFO     | current memory leak: 4.86 B/s (using 83 data points, chi2=0.03)
[2025-07-26 22:10:37] 2025-07-27 02:10:16,959 | INFO     | could have reported an average CPU frequency of 2618 MHz (8 samples)
[2025-07-26 22:10:37] 2025-07-27 02:10:16,960 | INFO     | ..............................
[2025-07-26 22:10:37] 2025-07-27 02:10:16,960 | INFO     | . Timing measurements:
[2025-07-26 22:10:37] 2025-07-27 02:10:16,960 | INFO     | . get job = 0 s
[2025-07-26 22:10:37] 2025-07-27 02:10:16,960 | INFO     | . initial setup = 3 s
[2025-07-26 22:10:37] 2025-07-27 02:10:16,960 | INFO     | . payload setup = 12 s
[2025-07-26 22:10:37] 2025-07-27 02:10:16,960 | INFO     | . stage-in = 0 s
[2025-07-26 22:10:37] 2025-07-27 02:10:16,960 | INFO     | . payload execution = 7242 s
[2025-07-26 22:10:37] 2025-07-27 02:10:16,960 | INFO     | . stage-out = 0 s
[2025-07-26 22:10:37] 2025-07-27 02:10:16,960 | INFO     | . log creation = 0 s
[2025-07-26 22:10:37] 2025-07-27 02:10:16,960 | INFO     | ..............................
[2025-07-26 22:10:37] 2025-07-27 02:10:17,063 | INFO     | 
[2025-07-26 22:10:37] 2025-07-27 02:10:17,063 | INFO     | job summary report
[2025-07-26 22:10:37] 2025-07-27 02:10:17,063 | INFO     | --------------------------------------------------
[2025-07-26 22:10:37] 2025-07-27 02:10:17,063 | INFO     | PanDA job id: 6745354507
[2025-07-26 22:10:37] 2025-07-27 02:10:17,063 | INFO     | task id: 45743349
[2025-07-26 22:10:37] 2025-07-27 02:10:17,063 | INFO     | errors: (none)
[2025-07-26 22:10:37] 2025-07-27 02:10:17,063 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 22:10:37] 2025-07-27 02:10:17,063 | INFO     | pilot state: finished 
[2025-07-26 22:10:37] 2025-07-27 02:10:17,064 | INFO     | transexitcode: 0
[2025-07-26 22:10:37] 2025-07-27 02:10:17,064 | INFO     | exeerrorcode: 0
[2025-07-26 22:10:37] 2025-07-27 02:10:17,064 | INFO     | exeerrordiag: 
[2025-07-26 22:10:37] 2025-07-27 02:10:17,064 | INFO     | exitcode: 0
[2025-07-26 22:10:37] 2025-07-27 02:10:17,064 | INFO     | exitmsg: OK
[2025-07-26 22:10:37] 2025-07-27 02:10:17,064 | INFO     | cpuconsumptiontime: 50520 s
[2025-07-26 22:10:37] 2025-07-27 02:10:17,064 | INFO     | nevents: 400
[2025-07-26 22:10:37] 2025-07-27 02:10:17,064 | INFO     | neventsw: 0
[2025-07-26 22:10:37] 2025-07-27 02:10:17,064 | INFO     | pid: 1760510
[2025-07-26 22:10:37] 2025-07-27 02:10:17,064 | INFO     | pgrp: 1760510
[2025-07-26 22:10:37] 2025-07-27 02:10:17,064 | INFO     | corecount: 8
[2025-07-26 22:10:37] 2025-07-27 02:10:17,064 | INFO     | event service: False
[2025-07-26 22:10:37] 2025-07-27 02:10:17,064 | INFO     | sizes: {0: 2397304, 1: 2397503, 7: 2397765, 11: 2397793, 7257: 2425179, 7258: 2434177, 7260: 2434361, 7268: 2434555}
[2025-07-26 22:10:37] 2025-07-27 02:10:17,065 | INFO     | --------------------------------------------------
[2025-07-26 22:10:37] 2025-07-27 02:10:17,065 | INFO     | 
[2025-07-26 22:10:37] 2025-07-27 02:10:17,065 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-26 22:10:37] 2025-07-27 02:10:17,091 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 22:10:37] 2025-07-27 02:10:17,091 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 22:10:37] 2025-07-27 02:10:17,091 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 22:10:37] 2025-07-27 02:10:17,091 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 22:10:37] 2025-07-27 02:10:17,091 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 22:10:37] 2025-07-27 02:10:17,091 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 22:10:37] 2025-07-27 02:10:17,092 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 22:10:37] 2025-07-27 02:10:17,092 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 22:10:37] 2025-07-27 02:10:17,092 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 22:10:37] 2025-07-27 02:10:17,092 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 22:10:37] 2025-07-27 02:10:17,092 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 22:10:37] 2025-07-27 02:10:17,092 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 22:10:37] 2025-07-27 02:10:17,092 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 22:10:37] 2025-07-27 02:10:17,092 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 22:10:37] 2025-07-27 02:10:17,092 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 22:10:37] 2025-07-27 02:10:17,092 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 22:10:37] 2025-07-27 02:10:17,092 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 22:10:37] 2025-07-27 02:10:17,092 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 22:10:37] 2025-07-27 02:10:17,092 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 22:10:37] 2025-07-27 02:10:17,092 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 22:10:37] 2025-07-27 02:10:17,093 | INFO     | job 6745354507 has completed (purged errors)
[2025-07-26 22:10:37] 2025-07-27 02:10:17,093 | INFO     | overall cleanup function is called
[2025-07-26 22:10:37] 2025-07-27 02:10:18,101 | INFO     | --- collectZombieJob: --- 10, [1760510]
[2025-07-26 22:10:37] 2025-07-27 02:10:18,104 | INFO     | zombie collector waiting for pid 1760510
[2025-07-26 22:10:37] 2025-07-27 02:10:18,104 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 22:10:37] 2025-07-27 02:10:18,104 | INFO     | collected zombie processes
[2025-07-26 22:10:37] 2025-07-27 02:10:18,104 | INFO     | will attempt to kill all subprocesses of pid=1760510
[2025-07-26 22:10:37] 2025-07-27 02:10:19,147 | INFO     | PID=1748101 has CPU usage=12.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-26 22:10:37] 2025-07-27 02:10:19,147 | INFO     | .. there are 21 such processes running
[2025-07-26 22:10:37] 2025-07-27 02:10:19,169 | INFO     | process IDs to be killed: [1760510] (in reverse order)
[2025-07-26 22:10:37] 2025-07-27 02:10:19,284 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 22:10:37] 2025-07-27 02:10:19,284 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 22:10:37] 2025-07-27 02:10:19,298 | INFO     | did not find any defunct processes belonging to 1760510
[2025-07-26 22:10:37] 2025-07-27 02:10:19,313 | INFO     | did not find any defunct processes belonging to 1760510
[2025-07-26 22:10:37] 2025-07-27 02:10:19,314 | INFO     | ready for new job
[2025-07-26 22:10:37] 2025-07-27 02:10:19,314 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 22:10:37] 2025-07-27 02:10:19,315 | INFO     | ***************************************
[2025-07-26 22:10:37] 2025-07-27 02:10:19,315 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 22:10:37] 2025-07-27 02:10:19,315 | INFO     | ***************************************
[2025-07-26 22:10:37] 2025-07-27 02:10:19,315 | INFO     | 
[2025-07-26 22:10:37] 2025-07-27 02:10:19,320 | INFO     | architecture information:
[2025-07-26 22:10:37] 2025-07-27 02:10:19,321 | INFO     | executing command: cat /etc/os-release
[2025-07-26 22:10:37] 2025-07-27 02:10:19,339 | INFO     | cat /etc/os-release:
[2025-07-26 22:10:37] NAME="CentOS Linux"
[2025-07-26 22:10:37] VERSION="7 (Core)"
[2025-07-26 22:10:37] ID="centos"
[2025-07-26 22:10:37] ID_LIKE="rhel fedora"
[2025-07-26 22:10:37] VERSION_ID="7"
[2025-07-26 22:10:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 22:10:37] ANSI_COLOR="0;31"
[2025-07-26 22:10:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 22:10:37] HOME_URL="https://www.centos.org/"
[2025-07-26 22:10:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 22:10:37] 
[2025-07-26 22:10:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 22:10:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 22:10:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 22:10:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 22:10:37] 
[2025-07-26 22:10:37] 2025-07-27 02:10:19,339 | INFO     | ***************************************
[2025-07-26 22:10:37] 2025-07-27 02:10:19,842 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-26 22:10:37] 2025-07-27 02:10:19,864 | INFO     | sufficient remaining disk space (75737595904 B)
[2025-07-26 22:10:37] 2025-07-27 02:10:19,864 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 22:10:37] 2025-07-27 02:10:19,864 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 22:10:37] 2025-07-27 02:10:19,864 | INFO     | update_server=False
[2025-07-26 22:10:37] 2025-07-27 02:10:19,864 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 22:10:37] 2025-07-27 02:10:19,866 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-26 22:10:37] 2025-07-27 02:10:19,866 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 22:10:37] 2025-07-27 02:10:19,867 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 22:10:37] 2025-07-27 02:10:19,867 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 22:10:37] 2025-07-27 02:10:19,868 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 22:10:37] 2025-07-27 02:10:19,880 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-26 22:10:37] 2025-07-27 02:10:19,880 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-26 22:10:37] 2025-07-27 02:10:19,880 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 22:10:37] 2025-07-27 02:10:19,881 | INFO     | will abort loop
[2025-07-26 22:10:37] 2025-07-27 02:10:20,129 | INFO     | all data control threads have been joined
[2025-07-26 22:10:37] 2025-07-27 02:10:20,243 | INFO     | all payload control threads have been joined
[2025-07-26 22:10:37] 2025-07-27 02:10:20,378 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 22:10:37] 2025-07-27 02:10:20,871 | INFO     | [job] retrieve thread has finished
[2025-07-26 22:10:37] 2025-07-27 02:10:20,885 | INFO     | [job] job monitor thread has finished
[2025-07-26 22:10:37] 2025-07-27 02:10:21,023 | INFO     | all job control threads have been joined
[2025-07-26 22:10:37] 2025-07-27 02:10:21,135 | INFO     | [data] control thread has finished
[2025-07-26 22:10:37] 2025-07-27 02:10:21,249 | INFO     | [payload] control thread has finished
[2025-07-26 22:10:37] 2025-07-27 02:10:21,258 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 22:10:37] 2025-07-27 02:10:21,451 | INFO     | [data] copytool_in thread has finished
[2025-07-26 22:10:37] 2025-07-27 02:10:21,461 | INFO     | [job] validate thread has finished
[2025-07-26 22:10:37] 2025-07-27 02:10:21,716 | INFO     | [payload] validate_post thread has finished
[2025-07-26 22:10:37] 2025-07-27 02:10:21,900 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 22:10:37] 2025-07-27 02:10:22,028 | INFO     | [job] control thread has finished
[2025-07-26 22:10:37] 2025-07-27 02:10:22,072 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 22:10:37] 2025-07-27 02:10:22,164 | INFO     | [payload] failed_post thread has finished
[2025-07-26 22:10:37] 2025-07-27 02:10:22,269 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 22:10:37] 2025-07-27 02:10:22,383 | INFO     | [data] copytool_out thread has finished
[2025-07-26 22:10:37] 2025-07-27 02:10:23,078 | INFO     | [job] queue monitor thread has finished
[2025-07-26 22:10:37] 2025-07-27 02:10:23,874 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 22:10:37] 2025-07-27 02:10:30,867 | INFO     | job.realtimelogging is not enabled
[2025-07-26 22:10:37] 2025-07-27 02:10:31,873 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 22:10:37] 2025-07-27 02:10:32,165 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139704765769536)>', '<ExcThread(monitor, started 139704137672448)>']
[2025-07-26 22:10:37] 2025-07-27 02:10:32,933 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 22:10:37] 2025-07-27 02:10:32,934 | INFO     | [monitor] control thread has ended
[2025-07-26 22:10:37] 2025-07-27 02:10:37,191 | INFO     | all workflow threads have been joined
[2025-07-26 22:10:37] 2025-07-27 02:10:37,192 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 22:10:37] 2025-07-27 02:10:37,192 | INFO     | traces error code: 0
[2025-07-26 22:10:37] 2025-07-27 02:10:37,192 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 22:10:37] 2025-07-27 02:10:37,365 [wrapper] ==== pilot stdout END ====
[2025-07-26 22:10:37] 2025-07-27 02:10:37,370 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 22:10:37] 2025-07-27 02:10:37,375 [wrapper] pilotpid: 1748101
[2025-07-26 22:10:37] 2025-07-27 02:10:37,380 [wrapper] Pilot exit status: 0
[2025-07-26 22:10:37] 2025-07-27 02:10:37,395 [wrapper] pandaids: 6745354507
[2025-07-26 22:10:37] 2025-07-27 02:10:37,480 [wrapper] cleanup supervisor_pilot 2089214 1748102
[2025-07-26 22:10:37] 2025-07-27 02:10:37,484 [wrapper] Test setup, not cleaning
[2025-07-26 22:10:37] 2025-07-27 02:10:37,487 [wrapper] apfmon messages muted
[2025-07-26 22:10:37] 2025-07-27 02:10:37,493 [wrapper] ==== wrapper stdout END ====
[2025-07-26 22:10:37] 2025-07-27 02:10:37,498 [wrapper] ==== wrapper stderr END ====
[2025-07-26 22:10:37]  *** Error codes and diagnostics ***
[2025-07-26 22:10:37]     "exeErrorCode": 0,
[2025-07-26 22:10:37]     "exeErrorDiag": "",
[2025-07-26 22:10:37]     "pilotErrorCode": 0,
[2025-07-26 22:10:37]     "pilotErrorDiag": "",
[2025-07-26 22:10:37]  *** Listing of results directory ***
[2025-07-26 22:10:37] total 348200
[2025-07-26 22:10:37] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 14:40 pilot3.tar.gz
[2025-07-26 22:10:37] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 14:56 queuedata.json
[2025-07-26 22:10:37] -rwx------. 1 boincer umatlas     36292 Jul 26 14:57 runpilot2-wrapper.sh
[2025-07-26 22:10:37] -rw-r--r--. 1 boincer umatlas       100 Jul 26 20:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 22:10:37] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 20:08 run_atlas
[2025-07-26 22:10:37] -rw-r--r--. 1 boincer umatlas       105 Jul 26 20:08 job.xml
[2025-07-26 22:10:37] -rw-r--r--. 2 boincer umatlas 142216475 Jul 26 20:08 EVNT.45743347._002410.pool.root.1
[2025-07-26 22:10:37] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 20:08 start_atlas.sh
[2025-07-26 22:10:37] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 20:08 shared
[2025-07-26 22:10:37] -rw-r--r--. 2 boincer umatlas    542898 Jul 26 20:08 input.tar.gz
[2025-07-26 22:10:37] -rw-r--r--. 1 boincer umatlas         0 Jul 26 20:08 boinc_lockfile
[2025-07-26 22:10:37] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 20:08 pandaJob.out
[2025-07-26 22:10:37] -rw-------. 1 boincer umatlas    980117 Jul 26 20:08 agis_schedconf.cvmfs.json
[2025-07-26 22:10:37] -rw-------. 1 boincer umatlas   1593052 Jul 26 20:08 agis_ddmendpoints.agis.ALL.json
[2025-07-26 22:10:37] drwx------. 4 boincer umatlas      4096 Jul 26 20:08 pilot3
[2025-07-26 22:10:37] -rw-------. 1 boincer umatlas 208428647 Jul 26 22:09 HITS.45743349._042684.pool.root.1
[2025-07-26 22:10:37] -rw-r--r--. 1 boincer umatlas      6855 Jul 26 22:09 init_data.xml
[2025-07-26 22:10:37] -rw-r--r--. 1 boincer umatlas       530 Jul 26 22:09 boinc_task_state.xml
[2025-07-26 22:10:37] -rw-------. 1 boincer umatlas        95 Jul 26 22:09 pilot_heartbeat.json
[2025-07-26 22:10:37] -rw-------. 1 boincer umatlas      1036 Jul 26 22:10 memory_monitor_summary.json
[2025-07-26 22:10:37] -rw-------. 1 boincer umatlas    329886 Jul 26 22:10 log.45743349._042684.job.log.tgz.1
[2025-07-26 22:10:37] -rw-------. 1 boincer umatlas      7818 Jul 26 22:10 heartbeat.json
[2025-07-26 22:10:37] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 22:10 boinc_mmap_file
[2025-07-26 22:10:37] -rw-r--r--. 1 boincer umatlas        27 Jul 26 22:10 wrapper_checkpoint.txt
[2025-07-26 22:10:37] -rw-------. 1 boincer umatlas      4738 Jul 26 22:10 pilotlog.txt
[2025-07-26 22:10:37] -rw-------. 1 boincer umatlas    684943 Jul 26 22:10 log.45743349._042684.job.log.1
[2025-07-26 22:10:37] -rw-------. 1 boincer umatlas       357 Jul 26 22:10 output.list
[2025-07-26 22:10:37] -rw-r--r--. 1 boincer umatlas       620 Jul 26 22:10 runtime_log
[2025-07-26 22:10:37] -rw-------. 1 boincer umatlas   1034240 Jul 26 22:10 result.tar.gz
[2025-07-26 22:10:37] -rw-------. 1 boincer umatlas       653 Jul 26 22:10 V9SMDmpGzz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmcG1KDmv6UYnn.diag
[2025-07-26 22:10:37] -rw-r--r--. 1 boincer umatlas      8665 Jul 26 22:10 runtime_log.err
[2025-07-26 22:10:37] -rw-r--r--. 1 boincer umatlas     20982 Jul 26 22:10 stderr.txt
[2025-07-26 22:10:37] HITS file was successfully produced:
[2025-07-26 22:10:37] -rw-------. 1 boincer umatlas 208428647 Jul 26 22:09 shared/HITS.pool.root.1
[2025-07-26 22:10:37]  *** Contents of shared directory: ***
[2025-07-26 22:10:37] total 343996
[2025-07-26 22:10:37] -rw-r--r--. 2 boincer umatlas 142216475 Jul 26 20:08 ATLAS.root_0
[2025-07-26 22:10:37] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 20:08 start_atlas.sh
[2025-07-26 22:10:37] -rw-r--r--. 2 boincer umatlas    542898 Jul 26 20:08 input.tar.gz
[2025-07-26 22:10:37] -rw-------. 1 boincer umatlas 208428647 Jul 26 22:09 HITS.pool.root.1
[2025-07-26 22:10:37] -rw-------. 1 boincer umatlas   1034240 Jul 26 22:10 result.tar.gz
22:10:38 (1744456): run_atlas exited; CPU time 50821.237584
22:10:38 (1744456): called boinc_finish(0)

</stderr_txt>
]]>

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