Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:57:48 (1636989): wrapper (7.7.26015): starting
19:57:48 (1636989): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 19:57:48] Arguments: --nthreads 8
[2025-07-26 19:57:48] Threads: 8
[2025-07-26 19:57:48] Checking for CVMFS
[2025-07-26 19:57:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 19:57:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 19:57:48] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 19:57:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 19:57:49] 2.13.0.0 1923533 18914 292872 148793 1 288 19643159 32935936 18255 16776704 0 88842144 99.553 142205984 19393 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 19:57:49] CVMFS is ok
[2025-07-26 19:57:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 19:57:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 19:57:49] Further information can be found at the LHC@home message board.
[2025-07-26 19:57:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 19:57:49] Checking for apptainer binary...
[2025-07-26 19:57:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 19:57:49] Running /usr/bin/apptainer --version
[2025-07-26 19:57:49] apptainer version 1.4.1-1.el9
[2025-07-26 19:57:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 19:57:49] c7-3-17.aglt2.org
[2025-07-26 19:57:49] apptainer works
[2025-07-26 19:57:49] Set ATHENA_PROC_NUMBER=8
[2025-07-26 19:57:49] Set ATHENA_CORE_NUMBER=8
[2025-07-26 19:57:49] Starting ATLAS job with PandaID=6745354428
[2025-07-26 19:57:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 21:35:58]  *** The last 200 lines of the pilot log: ***
[2025-07-26 21:35:58]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 21:35:58]  replicas=None
[2025-07-26 21:35:58]  scope=mc23_13p6TeV
[2025-07-26 21:35:58]  status=None
[2025-07-26 21:35:58]  status_code=0
[2025-07-26 21:35:58]  storage_token=
[2025-07-26 21:35:58]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745354428/log.45743349._042605.job.log.tgz.1
[2025-07-26 21:35:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/1c/log.45743349._042605.job.log.tgz.1
[2025-07-26 21:35:58]  workdir=None
[2025-07-26 21:35:58] ]
[2025-07-26 21:35:58] 2025-07-27 01:35:13,663 | INFO     | transferring file log.45743349._042605.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745354428/log.45743349._042605.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 21:35:58] 2025-07-27 01:35:13,663 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745354428/log.45743349._042605.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._042605.job
[2025-07-26 21:35:58] 2025-07-27 01:35:13,688 | INFO     | adding to output.list: log.45743349._042605.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/1c/log.45743349._042605.job.log.tg
[2025-07-26 21:35:58] 2025-07-27 01:35:13,688 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 21:35:58] 2025-07-27 01:35:13,689 | INFO     | summary of transferred files:
[2025-07-26 21:35:58] 2025-07-27 01:35:13,689 | INFO     |  -- lfn=log.45743349._042605.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 21:35:58] 2025-07-27 01:35:13,689 | INFO     | stage-out finished correctly
[2025-07-26 21:35:58] 2025-07-27 01:35:15,567 | INFO     | monitor loop #409: job 0:6745354428 is in state 'finished'
[2025-07-26 21:35:58] 2025-07-27 01:35:15,567 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 21:35:58] 2025-07-27 01:35:17,214 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 21:35:58] 2025-07-27 01:35:18,071 | INFO     | monitor loop #410: job 0:6745354428 is in state 'finished'
[2025-07-26 21:35:58] 2025-07-27 01:35:18,072 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 21:35:58] 2025-07-27 01:35:19,639 | INFO     | job 6745354428 has state=finished
[2025-07-26 21:35:58] 2025-07-27 01:35:19,642 | INFO     | preparing for final server update for job 6745354428 in state='finished'
[2025-07-26 21:35:58] 2025-07-27 01:35:19,642 | INFO     | this job has now completed (state=finished)
[2025-07-26 21:35:58] 2025-07-27 01:35:19,642 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 21:35:58] 2025-07-27 01:35:19,643 | INFO     | log transfer has been attempted: DONE
[2025-07-26 21:35:58] 2025-07-27 01:35:19,643 | INFO     | job 6745354428 has finished - writing final server update
[2025-07-26 21:35:58] 2025-07-27 01:35:19,643 | INFO     | total number of processed events: 400 (read)
[2025-07-26 21:35:58] 2025-07-27 01:35:19,647 | INFO     | executing command: lscpu
[2025-07-26 21:35:58] 2025-07-27 01:35:19,730 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 21:35:58] 2025-07-27 01:35:20,575 | INFO     | monitor loop #411: job 0:6745354428 is in state 'finished'
[2025-07-26 21:35:58] 2025-07-27 01:35:20,575 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 21:35:58] 2025-07-27 01:35:23,078 | INFO     | monitor loop #412: job 0:6745354428 is in state 'finished'
[2025-07-26 21:35:58] 2025-07-27 01:35:23,079 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 21:35:58] 2025-07-27 01:35:25,584 | INFO     | monitor loop #413: job 0:6745354428 is in state 'finished'
[2025-07-26 21:35:58] 2025-07-27 01:35:25,584 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 21:35:58] 2025-07-27 01:35:25,816 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 21:35:58] 2025-07-27 01:35:25,822 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2990.768427083334
[2025-07-26 21:35:58] 2025-07-27 01:35:25,838 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745354428/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 21:35:58] 2025-07-27 01:35:25,839 | INFO     | extracted standard info from prmon json
[2025-07-26 21:35:58] 2025-07-27 01:35:25,840 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 21:35:58] 2025-07-27 01:35:25,840 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 21:35:58] 2025-07-27 01:35:25,840 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 21:35:58] 2025-07-27 01:35:25,840 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 21:35:58] 2025-07-27 01:35:25,842 | INFO     | fitting pss+swap vs Time
[2025-07-26 21:35:58] 2025-07-27 01:35:25,842 | INFO     | sum of square deviations: 211285822.0
[2025-07-26 21:35:58] 2025-07-27 01:35:25,843 | INFO     | sum of deviations: -6192158373.0
[2025-07-26 21:35:58] 2025-07-27 01:35:25,843 | INFO     | mean x: 1753577289.5
[2025-07-26 21:35:58] 2025-07-27 01:35:25,843 | INFO     | mean y: 2377846.1363636362
[2025-07-26 21:35:58] 2025-07-27 01:35:25,843 | INFO     | -- intersect: 51394507204.82125
[2025-07-26 21:35:58] 2025-07-27 01:35:25,843 | INFO     | intersect: 51394507204.82125
[2025-07-26 21:35:58] 2025-07-27 01:35:25,843 | INFO     | chi2: 0.09664065791928482
[2025-07-26 21:35:58] 2025-07-27 01:35:25,843 | INFO     | -- intersect: 51394507204.82125
[2025-07-26 21:35:58] 2025-07-27 01:35:25,843 | INFO     | current memory leak: -29.31 B/s (using 88 data points, chi2=0.10)
[2025-07-26 21:35:58] 2025-07-27 01:35:25,844 | INFO     | could have reported an average CPU frequency of 2961 MHz (7 samples)
[2025-07-26 21:35:58] 2025-07-27 01:35:25,844 | INFO     | ..............................
[2025-07-26 21:35:58] 2025-07-27 01:35:25,844 | INFO     | . Timing measurements:
[2025-07-26 21:35:58] 2025-07-27 01:35:25,844 | INFO     | . get job = 0 s
[2025-07-26 21:35:58] 2025-07-27 01:35:25,844 | INFO     | . initial setup = 3 s
[2025-07-26 21:35:58] 2025-07-27 01:35:25,844 | INFO     | . payload setup = 12 s
[2025-07-26 21:35:58] 2025-07-27 01:35:25,844 | INFO     | . stage-in = 0 s
[2025-07-26 21:35:58] 2025-07-27 01:35:25,844 | INFO     | . payload execution = 5785 s
[2025-07-26 21:35:58] 2025-07-27 01:35:25,844 | INFO     | . stage-out = 1 s
[2025-07-26 21:35:58] 2025-07-27 01:35:25,844 | INFO     | . log creation = 0 s
[2025-07-26 21:35:58] 2025-07-27 01:35:25,845 | INFO     | ..............................
[2025-07-26 21:35:58] 2025-07-27 01:35:25,915 | INFO     | 
[2025-07-26 21:35:58] 2025-07-27 01:35:25,917 | INFO     | job summary report
[2025-07-26 21:35:58] 2025-07-27 01:35:25,917 | INFO     | --------------------------------------------------
[2025-07-26 21:35:58] 2025-07-27 01:35:25,917 | INFO     | PanDA job id: 6745354428
[2025-07-26 21:35:58] 2025-07-27 01:35:25,917 | INFO     | task id: 45743349
[2025-07-26 21:35:58] 2025-07-27 01:35:25,917 | INFO     | errors: (none)
[2025-07-26 21:35:58] 2025-07-27 01:35:25,917 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 21:35:58] 2025-07-27 01:35:25,917 | INFO     | pilot state: finished 
[2025-07-26 21:35:58] 2025-07-27 01:35:25,917 | INFO     | transexitcode: 0
[2025-07-26 21:35:58] 2025-07-27 01:35:25,917 | INFO     | exeerrorcode: 0
[2025-07-26 21:35:58] 2025-07-27 01:35:25,917 | INFO     | exeerrordiag: 
[2025-07-26 21:35:58] 2025-07-27 01:35:25,917 | INFO     | exitcode: 0
[2025-07-26 21:35:58] 2025-07-27 01:35:25,917 | INFO     | exitmsg: OK
[2025-07-26 21:35:58] 2025-07-27 01:35:25,918 | INFO     | cpuconsumptiontime: 40190 s
[2025-07-26 21:35:58] 2025-07-27 01:35:25,918 | INFO     | nevents: 400
[2025-07-26 21:35:58] 2025-07-27 01:35:25,918 | INFO     | neventsw: 0
[2025-07-26 21:35:58] 2025-07-27 01:35:25,918 | INFO     | pid: 1649518
[2025-07-26 21:35:58] 2025-07-27 01:35:25,918 | INFO     | pgrp: 1649518
[2025-07-26 21:35:58] 2025-07-27 01:35:25,918 | INFO     | corecount: 8
[2025-07-26 21:35:58] 2025-07-27 01:35:25,918 | INFO     | event service: False
[2025-07-26 21:35:58] 2025-07-27 01:35:25,918 | INFO     | sizes: {0: 2397303, 1: 2397502, 9: 2397764, 11: 2397792, 5801: 2424560, 5804: 2433558, 5807: 2433742, 5816: 2433936}
[2025-07-26 21:35:58] 2025-07-27 01:35:25,918 | INFO     | --------------------------------------------------
[2025-07-26 21:35:58] 2025-07-27 01:35:25,918 | INFO     | 
[2025-07-26 21:35:58] 2025-07-27 01:35:25,918 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 21:35:58] 2025-07-27 01:35:25,959 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 21:35:58] 2025-07-27 01:35:25,960 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 21:35:58] 2025-07-27 01:35:25,960 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 21:35:58] 2025-07-27 01:35:25,961 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 21:35:58] 2025-07-27 01:35:25,962 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 21:35:58] 2025-07-27 01:35:25,962 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 21:35:58] 2025-07-27 01:35:25,962 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 21:35:58] 2025-07-27 01:35:25,962 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 21:35:58] 2025-07-27 01:35:25,962 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 21:35:58] 2025-07-27 01:35:25,962 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 21:35:58] 2025-07-27 01:35:25,962 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 21:35:58] 2025-07-27 01:35:25,962 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 21:35:58] 2025-07-27 01:35:25,962 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 21:35:58] 2025-07-27 01:35:25,962 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 21:35:58] 2025-07-27 01:35:25,962 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 21:35:58] 2025-07-27 01:35:25,962 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 21:35:58] 2025-07-27 01:35:25,963 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 21:35:58] 2025-07-27 01:35:25,963 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 21:35:58] 2025-07-27 01:35:25,963 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 21:35:58] 2025-07-27 01:35:25,963 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 21:35:58] 2025-07-27 01:35:25,963 | INFO     | job 6745354428 has completed (purged errors)
[2025-07-26 21:35:58] 2025-07-27 01:35:25,963 | INFO     | overall cleanup function is called
[2025-07-26 21:35:58] 2025-07-27 01:35:26,974 | INFO     | --- collectZombieJob: --- 10, [1649518]
[2025-07-26 21:35:58] 2025-07-27 01:35:26,975 | INFO     | zombie collector waiting for pid 1649518
[2025-07-26 21:35:58] 2025-07-27 01:35:26,975 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 21:35:58] 2025-07-27 01:35:26,975 | INFO     | collected zombie processes
[2025-07-26 21:35:58] 2025-07-27 01:35:26,975 | INFO     | will attempt to kill all subprocesses of pid=1649518
[2025-07-26 21:35:58] 2025-07-27 01:35:27,433 | INFO     | process IDs to be killed: [1649518] (in reverse order)
[2025-07-26 21:35:58] 2025-07-27 01:35:27,570 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 21:35:58] 2025-07-27 01:35:27,571 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 21:35:58] 2025-07-27 01:35:27,587 | INFO     | did not find any defunct processes belonging to 1649518
[2025-07-26 21:35:58] 2025-07-27 01:35:27,606 | INFO     | did not find any defunct processes belonging to 1649518
[2025-07-26 21:35:58] 2025-07-27 01:35:27,606 | INFO     | ready for new job
[2025-07-26 21:35:58] 2025-07-27 01:35:27,606 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 21:35:58] 2025-07-27 01:35:27,609 | INFO     | ***************************************
[2025-07-26 21:35:58] 2025-07-27 01:35:27,609 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 21:35:58] 2025-07-27 01:35:27,609 | INFO     | ***************************************
[2025-07-26 21:35:58] 2025-07-27 01:35:27,609 | INFO     | 
[2025-07-26 21:35:58] 2025-07-27 01:35:27,659 | INFO     | architecture information:
[2025-07-26 21:35:58] 2025-07-27 01:35:27,670 | INFO     | executing command: cat /etc/os-release
[2025-07-26 21:35:58] 2025-07-27 01:35:27,695 | INFO     | cat /etc/os-release:
[2025-07-26 21:35:58] NAME="CentOS Linux"
[2025-07-26 21:35:58] VERSION="7 (Core)"
[2025-07-26 21:35:58] ID="centos"
[2025-07-26 21:35:58] ID_LIKE="rhel fedora"
[2025-07-26 21:35:58] VERSION_ID="7"
[2025-07-26 21:35:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 21:35:58] ANSI_COLOR="0;31"
[2025-07-26 21:35:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 21:35:58] HOME_URL="https://www.centos.org/"
[2025-07-26 21:35:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 21:35:58] 
[2025-07-26 21:35:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 21:35:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 21:35:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 21:35:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 21:35:58] 
[2025-07-26 21:35:58] 2025-07-27 01:35:27,695 | INFO     | ***************************************
[2025-07-26 21:35:58] 2025-07-27 01:35:28,198 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 21:35:58] 2025-07-27 01:35:28,222 | INFO     | sufficient remaining disk space (75704041472 B)
[2025-07-26 21:35:58] 2025-07-27 01:35:28,223 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 21:35:58] 2025-07-27 01:35:28,223 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 21:35:58] 2025-07-27 01:35:28,223 | INFO     | update_server=False
[2025-07-26 21:35:58] 2025-07-27 01:35:28,223 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 21:35:58] 2025-07-27 01:35:28,223 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 21:35:58] 2025-07-27 01:35:28,266 | INFO     | all data control threads have been joined
[2025-07-26 21:35:58] 2025-07-27 01:35:28,433 | INFO     | all payload control threads have been joined
[2025-07-26 21:35:58] 2025-07-27 01:35:29,100 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 21:35:58] 2025-07-27 01:35:29,101 | INFO     | aborting loop
[2025-07-26 21:35:58] 2025-07-27 01:35:29,228 | INFO     | [job] retrieve thread has finished
[2025-07-26 21:35:58] 2025-07-27 01:35:29,271 | INFO     | [data] control thread has finished
[2025-07-26 21:35:58] 2025-07-27 01:35:29,290 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 21:35:58] 2025-07-27 01:35:29,438 | INFO     | [payload] control thread has finished
[2025-07-26 21:35:58] 2025-07-27 01:35:29,530 | INFO     | all job control threads have been joined
[2025-07-26 21:35:58] 2025-07-27 01:35:29,658 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 21:35:58] 2025-07-27 01:35:29,659 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 21:35:58] 2025-07-27 01:35:29,666 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 21:35:58] 2025-07-27 01:35:29,709 | INFO     | [job] validate thread has finished
[2025-07-26 21:35:58] 2025-07-27 01:35:29,780 | INFO     | [data] copytool_in thread has finished
[2025-07-26 21:35:58] 2025-07-27 01:35:30,105 | INFO     | [job] job monitor thread has finished
[2025-07-26 21:35:58] 2025-07-27 01:35:30,172 | INFO     | [payload] validate_post thread has finished
[2025-07-26 21:35:58] 2025-07-27 01:35:30,409 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 21:35:58] 2025-07-27 01:35:30,535 | INFO     | [job] control thread has finished
[2025-07-26 21:35:58] 2025-07-27 01:35:30,776 | INFO     | [payload] failed_post thread has finished
[2025-07-26 21:35:58] 2025-07-27 01:35:30,926 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 21:35:58] 2025-07-27 01:35:31,296 | INFO     | [data] copytool_out thread has finished
[2025-07-26 21:35:58] 2025-07-27 01:35:31,931 | INFO     | [job] queue monitor thread has finished
[2025-07-26 21:35:58] 2025-07-27 01:35:32,225 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 21:35:58] 2025-07-27 01:35:33,425 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139733243537216)>', '<ExcThread(monitor, started 139732885411584)>']
[2025-07-26 21:35:58] 2025-07-27 01:35:38,450 | INFO     | all workflow threads have been joined
[2025-07-26 21:35:58] 2025-07-27 01:35:38,452 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 21:35:58] 2025-07-27 01:35:38,453 | INFO     | traces error code: 0
[2025-07-26 21:35:58] 2025-07-27 01:35:38,453 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 21:35:58] 2025-07-27 01:35:57,759 | INFO     | PID=1643060 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 21:35:58] 2025-07-27 01:35:57,760 | INFO     | .. there are 20 such processes running
[2025-07-26 21:35:58] 2025-07-27 01:35:57,760 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 21:35:58] 2025-07-27 01:35:57,760 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 21:35:58] 2025-07-27 01:35:57,760 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 21:35:58] 2025-07-27 01:35:57,760 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 21:35:58] 2025-07-27 01:35:57,761 | INFO     | [monitor] control thread has ended
[2025-07-26 21:35:58] 2025-07-27 01:35:57,938 [wrapper] ==== pilot stdout END ====
[2025-07-26 21:35:58] 2025-07-27 01:35:57,942 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 21:35:58] 2025-07-27 01:35:57,946 [wrapper] pilotpid: 1643060
[2025-07-26 21:35:58] 2025-07-27 01:35:57,951 [wrapper] Pilot exit status: 0
[2025-07-26 21:35:58] 2025-07-27 01:35:57,973 [wrapper] pandaids: 6745354428
[2025-07-26 21:35:58] 2025-07-27 01:35:58,092 [wrapper] cleanup supervisor_pilot 1992885 1643061
[2025-07-26 21:35:58] 2025-07-27 01:35:58,094 [wrapper] Test setup, not cleaning
[2025-07-26 21:35:58] 2025-07-27 01:35:58,103 [wrapper] apfmon messages muted
[2025-07-26 21:35:58] 2025-07-27 01:35:58,107 [wrapper] ==== wrapper stdout END ====
[2025-07-26 21:35:58] 2025-07-27 01:35:58,110 [wrapper] ==== wrapper stderr END ====
[2025-07-26 21:35:58]  *** Error codes and diagnostics ***
[2025-07-26 21:35:58]     "exeErrorCode": 0,
[2025-07-26 21:35:58]     "exeErrorDiag": "",
[2025-07-26 21:35:58]     "pilotErrorCode": 0,
[2025-07-26 21:35:58]     "pilotErrorDiag": "",
[2025-07-26 21:35:58]  *** Listing of results directory ***
[2025-07-26 21:35:58] total 348644
[2025-07-26 21:35:58] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 14:40 pilot3.tar.gz
[2025-07-26 21:35:58] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 14:51 queuedata.json
[2025-07-26 21:35:58] -rwx------. 1 boincer umatlas     36292 Jul 26 14:52 runpilot2-wrapper.sh
[2025-07-26 21:35:58] -rw-r--r--. 1 boincer umatlas       100 Jul 26 19:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 21:35:58] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 19:57 run_atlas
[2025-07-26 21:35:58] -rw-r--r--. 1 boincer umatlas       105 Jul 26 19:57 job.xml
[2025-07-26 21:35:58] -rw-r--r--. 2 boincer umatlas 143385424 Jul 26 19:57 EVNT.45743347._002405.pool.root.1
[2025-07-26 21:35:58] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 19:57 start_atlas.sh
[2025-07-26 21:35:58] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 19:57 shared
[2025-07-26 21:35:58] -rw-r--r--. 2 boincer umatlas    542893 Jul 26 19:57 input.tar.gz
[2025-07-26 21:35:58] -rw-r--r--. 1 boincer umatlas         0 Jul 26 19:57 boinc_lockfile
[2025-07-26 21:35:58] -rw-r--r--. 1 boincer umatlas      2562 Jul 26 19:57 pandaJob.out
[2025-07-26 21:35:58] -rw-------. 1 boincer umatlas    980117 Jul 26 19:58 agis_schedconf.cvmfs.json
[2025-07-26 21:35:58] -rw-------. 1 boincer umatlas   1593052 Jul 26 19:58 agis_ddmendpoints.agis.ALL.json
[2025-07-26 21:35:58] drwx------. 4 boincer umatlas      4096 Jul 26 19:58 pilot3
[2025-07-26 21:35:58] -rw-r--r--. 1 boincer umatlas      6931 Jul 26 21:31 init_data.xml
[2025-07-26 21:35:58] -rw-------. 1 boincer umatlas 208030220 Jul 26 21:34 HITS.45743349._042605.pool.root.1
[2025-07-26 21:35:58] -rw-r--r--. 1 boincer umatlas       529 Jul 26 21:34 boinc_task_state.xml
[2025-07-26 21:35:58] -rw-------. 1 boincer umatlas      1039 Jul 26 21:35 memory_monitor_summary.json
[2025-07-26 21:35:58] -rw-------. 1 boincer umatlas    307938 Jul 26 21:35 log.45743349._042605.job.log.tgz.1
[2025-07-26 21:35:58] -rw-------. 1 boincer umatlas      7784 Jul 26 21:35 heartbeat.json
[2025-07-26 21:35:58] -rw-r--r--. 1 boincer umatlas        27 Jul 26 21:35 wrapper_checkpoint.txt
[2025-07-26 21:35:58] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 21:35 boinc_mmap_file
[2025-07-26 21:35:58] -rw-------. 1 boincer umatlas        95 Jul 26 21:35 pilot_heartbeat.json
[2025-07-26 21:35:58] -rw-------. 1 boincer umatlas       823 Jul 26 21:35 pilotlog.txt
[2025-07-26 21:35:58] -rw-------. 1 boincer umatlas    549363 Jul 26 21:35 log.45743349._042605.job.log.1
[2025-07-26 21:35:58] -rw-------. 1 boincer umatlas       357 Jul 26 21:35 output.list
[2025-07-26 21:35:58] -rw-r--r--. 1 boincer umatlas       620 Jul 26 21:35 runtime_log
[2025-07-26 21:35:58] -rw-------. 1 boincer umatlas    880640 Jul 26 21:35 result.tar.gz
[2025-07-26 21:35:58] -rw-r--r--. 1 boincer umatlas      8655 Jul 26 21:35 runtime_log.err
[2025-07-26 21:35:58] -rw-------. 1 boincer umatlas       653 Jul 26 21:35 CcbNDmOBzz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTrSLDmMXD96m.diag
[2025-07-26 21:35:58] -rw-r--r--. 1 boincer umatlas     21954 Jul 26 21:35 stderr.txt
[2025-07-26 21:35:58] HITS file was successfully produced:
[2025-07-26 21:35:58] -rw-------. 1 boincer umatlas 208030220 Jul 26 21:34 shared/HITS.pool.root.1
[2025-07-26 21:35:58]  *** Contents of shared directory: ***
[2025-07-26 21:35:58] total 344596
[2025-07-26 21:35:58] -rw-r--r--. 2 boincer umatlas 143385424 Jul 26 19:57 ATLAS.root_0
[2025-07-26 21:35:58] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 19:57 start_atlas.sh
[2025-07-26 21:35:58] -rw-r--r--. 2 boincer umatlas    542893 Jul 26 19:57 input.tar.gz
[2025-07-26 21:35:58] -rw-------. 1 boincer umatlas 208030220 Jul 26 21:34 HITS.pool.root.1
[2025-07-26 21:35:58] -rw-------. 1 boincer umatlas    880640 Jul 26 21:35 result.tar.gz
21:35:59 (1636989): run_atlas exited; CPU time 40368.479460
21:35:59 (1636989): called boinc_finish(0)

</stderr_txt>
]]>

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