Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:58:00 (22210): wrapper (7.7.26015): starting
19:58:00 (22210): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 19:58:00] Arguments: --nthreads 8
[2025-07-26 19:58:00] Threads: 8
[2025-07-26 19:58:00] Checking for CVMFS
[2025-07-26 19:58:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 19:58:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 19:58:00] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 19:58:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 19:58:01] 2.11.2.0 3213 516188 245724 148793 2 133 19928907 20275200 917 130560 0 178822343 99.988 22510067 19703 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 19:58:01] CVMFS is ok
[2025-07-26 19:58:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 19:58:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 19:58:01] Further information can be found at the LHC@home message board.
[2025-07-26 19:58:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 19:58:01] Checking for apptainer binary...
[2025-07-26 19:58:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 19:58:01] Running /usr/bin/apptainer --version
[2025-07-26 19:58:01] apptainer version 1.3.2-1.el7
[2025-07-26 19:58:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 19:58:01] c-205-38.aglt2.org
[2025-07-26 19:58:01] apptainer works
[2025-07-26 19:58:01] Set ATHENA_PROC_NUMBER=8
[2025-07-26 19:58:01] Set ATHENA_CORE_NUMBER=8
[2025-07-26 19:58:01] Starting ATLAS job with PandaID=6745354697
[2025-07-26 19:58:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 21:00:11]  *** The last 200 lines of the pilot log: ***
[2025-07-26 21:00:11] 2025-07-27 00:59:30,756 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 21:00:11] 2025-07-27 00:59:30,756 | INFO     | summary of transferred files:
[2025-07-26 21:00:11] 2025-07-27 00:59:30,756 | INFO     |  -- lfn=log.45743349._042871.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 21:00:11] 2025-07-27 00:59:30,756 | INFO     | stage-out finished correctly
[2025-07-26 21:00:11] 2025-07-27 00:59:32,585 | INFO     | PID=25864 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 21:00:11] 2025-07-27 00:59:32,585 | INFO     | .. there are 2 such processes running
[2025-07-26 21:00:11] 2025-07-27 00:59:33,365 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 21:00:11] 2025-07-27 00:59:34,398 | WARNING  | process 32273 can no longer be monitored (due to stat problems) - aborting
[2025-07-26 21:00:11] 2025-07-27 00:59:34,398 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745354697/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 21:00:11] 2025-07-27 00:59:34,399 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745354697/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 21:00:11] 2025-07-27 00:59:34,400 | INFO     | reaping zombies for max 20 seconds
[2025-07-26 21:00:11] 2025-07-27 00:59:34,414 | INFO     | checking for looping job (in state=finished)
[2025-07-26 21:00:11] 2025-07-27 00:59:34,414 | INFO     | using looping job limit: 7200 s
[2025-07-26 21:00:11] 2025-07-27 00:59:34,415 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3256482 B
[2025-07-26 21:00:11] 2025-07-27 00:59:34,415 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15301 B
[2025-07-26 21:00:11] 2025-07-27 00:59:34,416 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 21:00:11] 2025-07-27 00:59:34,430 | INFO     | sufficient remaining disk space (32963035136 B)
[2025-07-26 21:00:11] 2025-07-27 00:59:34,430 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-26 21:00:11] 2025-07-27 00:59:34,431 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6745354697: 3549460 B (within 2537553920 B limit)
[2025-07-26 21:00:11] 2025-07-27 00:59:34,431 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6745354697/HITS.45743349._042871.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-26 21:00:11] 2025-07-27 00:59:34,432 | INFO     | total size of present files: 0 B (workdir size: 3549460 B)
[2025-07-26 21:00:11] 2025-07-27 00:59:34,432 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6745354697/HITS.45743349._042871.pool.root.1 since it does not exist
[2025-07-26 21:00:11] 2025-07-27 00:59:34,516 | INFO     | number of running child processes to parent process 32273: 1
[2025-07-26 21:00:11] 2025-07-27 00:59:34,517 | INFO     | maximum number of monitored processes: 6
[2025-07-26 21:00:11] 2025-07-27 00:59:35,725 | INFO     | job 6745354697 has state=finished
[2025-07-26 21:00:11] 2025-07-27 00:59:35,725 | INFO     | preparing for final server update for job 6745354697 in state='finished'
[2025-07-26 21:00:11] 2025-07-27 00:59:35,785 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-07-26 21:00:11] 2025-07-27 00:59:35,785 | INFO     | this job has now completed (state=finished)
[2025-07-26 21:00:11] 2025-07-27 00:59:35,785 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 21:00:11] 2025-07-27 00:59:35,785 | INFO     | log transfer has been attempted: DONE
[2025-07-26 21:00:11] 2025-07-27 00:59:35,786 | INFO     | job 6745354697 has finished - writing final server update
[2025-07-26 21:00:11] 2025-07-27 00:59:35,786 | INFO     | total number of processed events: 400 (read)
[2025-07-26 21:00:11] 2025-07-27 00:59:35,786 | INFO     | executing command: lscpu
[2025-07-26 21:00:11] 2025-07-27 00:59:35,817 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 21:00:11] 2025-07-27 00:59:37,019 | INFO     | monitor loop #280: job 0:6745354697 is in state 'finished'
[2025-07-26 21:00:11] 2025-07-27 00:59:37,019 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 21:00:11] 2025-07-27 00:59:37,954 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 21:00:11] 2025-07-27 00:59:37,955 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2848.9130625000003
[2025-07-26 21:00:11] 2025-07-27 00:59:37,957 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745354697/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 21:00:11] 2025-07-27 00:59:37,957 | INFO     | extracted standard info from prmon json
[2025-07-26 21:00:11] 2025-07-27 00:59:37,957 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 21:00:11] 2025-07-27 00:59:37,957 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 21:00:11] 2025-07-27 00:59:37,958 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 21:00:11] 2025-07-27 00:59:37,958 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 21:00:11] 2025-07-27 00:59:37,959 | INFO     | fitting pss+swap vs Time
[2025-07-26 21:00:11] 2025-07-27 00:59:37,959 | INFO     | sum of square deviations: 46147842.0
[2025-07-26 21:00:11] 2025-07-27 00:59:37,959 | INFO     | sum of deviations: -3024533720.0
[2025-07-26 21:00:11] 2025-07-27 00:59:37,960 | INFO     | mean x: 1753576201.0
[2025-07-26 21:00:11] 2025-07-27 00:59:37,960 | INFO     | mean y: 2572046.3018867923
[2025-07-26 21:00:11] 2025-07-27 00:59:37,960 | INFO     | -- intersect: 114932114158.23851
[2025-07-26 21:00:11] 2025-07-27 00:59:37,960 | INFO     | intersect: 114932114158.23851
[2025-07-26 21:00:11] 2025-07-27 00:59:37,960 | INFO     | chi2: 0.035368809701144796
[2025-07-26 21:00:11] 2025-07-27 00:59:37,960 | INFO     | -- intersect: 114932114158.23851
[2025-07-26 21:00:11] 2025-07-27 00:59:37,960 | INFO     | current memory leak: -65.54 B/s (using 53 data points, chi2=0.04)
[2025-07-26 21:00:11] 2025-07-27 00:59:37,960 | INFO     | could have reported an average CPU frequency of 2951 MHz (6 samples)
[2025-07-26 21:00:11] 2025-07-27 00:59:37,961 | INFO     | ..............................
[2025-07-26 21:00:11] 2025-07-27 00:59:37,961 | INFO     | . Timing measurements:
[2025-07-26 21:00:11] 2025-07-27 00:59:37,961 | INFO     | . get job = 0 s
[2025-07-26 21:00:11] 2025-07-27 00:59:37,961 | INFO     | . initial setup = 2 s
[2025-07-26 21:00:11] 2025-07-27 00:59:37,961 | INFO     | . payload setup = 3 s
[2025-07-26 21:00:11] 2025-07-27 00:59:37,961 | INFO     | . stage-in = 0 s
[2025-07-26 21:00:11] 2025-07-27 00:59:37,961 | INFO     | . payload execution = 3659 s
[2025-07-26 21:00:11] 2025-07-27 00:59:37,961 | INFO     | . stage-out = 0 s
[2025-07-26 21:00:11] 2025-07-27 00:59:37,961 | INFO     | . log creation = 0 s
[2025-07-26 21:00:11] 2025-07-27 00:59:37,961 | INFO     | ..............................
[2025-07-26 21:00:11] 2025-07-27 00:59:38,020 | INFO     | 
[2025-07-26 21:00:11] 2025-07-27 00:59:38,020 | INFO     | job summary report
[2025-07-26 21:00:11] 2025-07-27 00:59:38,020 | INFO     | --------------------------------------------------
[2025-07-26 21:00:11] 2025-07-27 00:59:38,021 | INFO     | PanDA job id: 6745354697
[2025-07-26 21:00:11] 2025-07-27 00:59:38,021 | INFO     | task id: 45743349
[2025-07-26 21:00:11] 2025-07-27 00:59:38,021 | INFO     | errors: (none)
[2025-07-26 21:00:11] 2025-07-27 00:59:38,021 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 21:00:11] 2025-07-27 00:59:38,021 | INFO     | pilot state: finished 
[2025-07-26 21:00:11] 2025-07-27 00:59:38,021 | INFO     | transexitcode: 0
[2025-07-26 21:00:11] 2025-07-27 00:59:38,021 | INFO     | exeerrorcode: 0
[2025-07-26 21:00:11] 2025-07-27 00:59:38,021 | INFO     | exeerrordiag: 
[2025-07-26 21:00:11] 2025-07-27 00:59:38,021 | INFO     | exitcode: 0
[2025-07-26 21:00:11] 2025-07-27 00:59:38,021 | INFO     | exitmsg: OK
[2025-07-26 21:00:11] 2025-07-27 00:59:38,021 | INFO     | cpuconsumptiontime: 27282 s
[2025-07-26 21:00:11] 2025-07-27 00:59:38,021 | INFO     | nevents: 400
[2025-07-26 21:00:11] 2025-07-27 00:59:38,021 | INFO     | neventsw: 0
[2025-07-26 21:00:11] 2025-07-27 00:59:38,021 | INFO     | pid: 32273
[2025-07-26 21:00:11] 2025-07-27 00:59:38,021 | INFO     | pgrp: 32273
[2025-07-26 21:00:11] 2025-07-27 00:59:38,021 | INFO     | corecount: 8
[2025-07-26 21:00:11] 2025-07-27 00:59:38,021 | INFO     | event service: False
[2025-07-26 21:00:11] 2025-07-27 00:59:38,021 | INFO     | sizes: {0: 2396647, 1: 2397503, 3: 2397765, 12: 2397793, 3667: 2423632, 3668: 2432630, 3671: 2432814, 3676: 2433036}
[2025-07-26 21:00:11] 2025-07-27 00:59:38,021 | INFO     | --------------------------------------------------
[2025-07-26 21:00:11] 2025-07-27 00:59:38,021 | INFO     | 
[2025-07-26 21:00:11] 2025-07-27 00:59:38,022 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 21:00:11] 2025-07-27 00:59:38,036 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 21:00:11] 2025-07-27 00:59:38,037 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 21:00:11] 2025-07-27 00:59:38,037 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 21:00:11] 2025-07-27 00:59:38,037 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 21:00:11] 2025-07-27 00:59:38,037 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 21:00:11] 2025-07-27 00:59:38,037 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 21:00:11] 2025-07-27 00:59:38,037 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 21:00:11] 2025-07-27 00:59:38,037 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 21:00:11] 2025-07-27 00:59:38,038 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 21:00:11] 2025-07-27 00:59:38,038 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 21:00:11] 2025-07-27 00:59:38,038 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 21:00:11] 2025-07-27 00:59:38,038 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 21:00:11] 2025-07-27 00:59:38,038 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 21:00:11] 2025-07-27 00:59:38,038 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 21:00:11] 2025-07-27 00:59:38,038 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 21:00:11] 2025-07-27 00:59:38,038 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 21:00:11] 2025-07-27 00:59:38,038 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 21:00:11] 2025-07-27 00:59:38,039 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 21:00:11] 2025-07-27 00:59:38,039 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 21:00:11] 2025-07-27 00:59:38,039 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 21:00:11] 2025-07-27 00:59:38,039 | INFO     | job 6745354697 has completed (purged errors)
[2025-07-26 21:00:11] 2025-07-27 00:59:38,039 | INFO     | overall cleanup function is called
[2025-07-26 21:00:11] 2025-07-27 00:59:39,047 | INFO     | --- collectZombieJob: --- 10, [32273]
[2025-07-26 21:00:11] 2025-07-27 00:59:39,048 | INFO     | zombie collector waiting for pid 32273
[2025-07-26 21:00:11] 2025-07-27 00:59:39,048 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 21:00:11] 2025-07-27 00:59:39,048 | INFO     | collected zombie processes
[2025-07-26 21:00:11] 2025-07-27 00:59:39,048 | INFO     | will attempt to kill all subprocesses of pid=32273
[2025-07-26 21:00:11] 2025-07-27 00:59:39,143 | INFO     | process IDs to be killed: [32273] (in reverse order)
[2025-07-26 21:00:11] 2025-07-27 00:59:39,194 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 21:00:11] 2025-07-27 00:59:39,195 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 21:00:11] 2025-07-27 00:59:39,198 | INFO     | did not find any defunct processes belonging to 32273
[2025-07-26 21:00:11] 2025-07-27 00:59:39,200 | INFO     | did not find any defunct processes belonging to 32273
[2025-07-26 21:00:11] 2025-07-27 00:59:39,201 | INFO     | ready for new job
[2025-07-26 21:00:11] 2025-07-27 00:59:39,201 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 21:00:11] 2025-07-27 00:59:39,203 | INFO     | ***************************************
[2025-07-26 21:00:11] 2025-07-27 00:59:39,203 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 21:00:11] 2025-07-27 00:59:39,203 | INFO     | ***************************************
[2025-07-26 21:00:11] 2025-07-27 00:59:39,203 | INFO     | 
[2025-07-26 21:00:11] 2025-07-27 00:59:39,204 | INFO     | architecture information:
[2025-07-26 21:00:11] 2025-07-27 00:59:39,205 | INFO     | executing command: cat /etc/os-release
[2025-07-26 21:00:11] 2025-07-27 00:59:39,219 | INFO     | cat /etc/os-release:
[2025-07-26 21:00:11] NAME="CentOS Linux"
[2025-07-26 21:00:11] VERSION="7 (Core)"
[2025-07-26 21:00:11] ID="centos"
[2025-07-26 21:00:11] ID_LIKE="rhel fedora"
[2025-07-26 21:00:11] VERSION_ID="7"
[2025-07-26 21:00:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 21:00:11] ANSI_COLOR="0;31"
[2025-07-26 21:00:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 21:00:11] HOME_URL="https://www.centos.org/"
[2025-07-26 21:00:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 21:00:11] 
[2025-07-26 21:00:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 21:00:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 21:00:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 21:00:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 21:00:11] 
[2025-07-26 21:00:11] 2025-07-27 00:59:39,220 | INFO     | ***************************************
[2025-07-26 21:00:11] 2025-07-27 00:59:39,723 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 21:00:11] 2025-07-27 00:59:39,740 | INFO     | sufficient remaining disk space (32965132288 B)
[2025-07-26 21:00:11] 2025-07-27 00:59:39,741 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 21:00:11] 2025-07-27 00:59:39,741 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 21:00:11] 2025-07-27 00:59:39,741 | INFO     | update_server=False
[2025-07-26 21:00:11] 2025-07-27 00:59:39,741 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 21:00:11] 2025-07-27 00:59:39,742 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 21:00:11] 2025-07-27 00:59:39,742 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 21:00:11] 2025-07-27 00:59:39,742 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 21:00:11] 2025-07-27 00:59:40,193 | INFO     | all data control threads have been joined
[2025-07-26 21:00:11] 2025-07-27 00:59:40,388 | INFO     | all job control threads have been joined
[2025-07-26 21:00:11] 2025-07-27 00:59:40,528 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 21:00:11] 2025-07-27 00:59:40,529 | INFO     | aborting loop
[2025-07-26 21:00:11] 2025-07-27 00:59:40,747 | INFO     | [job] retrieve thread has finished
[2025-07-26 21:00:11] 2025-07-27 00:59:40,748 | INFO     | [job] queue monitor thread has finished
[2025-07-26 21:00:11] 2025-07-27 00:59:40,888 | INFO     | all payload control threads have been joined
[2025-07-26 21:00:11] 2025-07-27 00:59:41,011 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 21:00:11] 2025-07-27 00:59:41,026 | INFO     | [data] copytool_in thread has finished
[2025-07-26 21:00:11] 2025-07-27 00:59:41,198 | INFO     | [data] control thread has finished
[2025-07-26 21:00:11] 2025-07-27 00:59:41,274 | INFO     | [payload] failed_post thread has finished
[2025-07-26 21:00:11] 2025-07-27 00:59:41,365 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 21:00:11] 2025-07-27 00:59:41,366 | INFO     | [job] validate thread has finished
[2025-07-26 21:00:11] 2025-07-27 00:59:41,393 | INFO     | [job] control thread has finished
[2025-07-26 21:00:11] 2025-07-27 00:59:41,463 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 21:00:11] 2025-07-27 00:59:41,534 | INFO     | [job] job monitor thread has finished
[2025-07-26 21:00:11] 2025-07-27 00:59:41,747 | INFO     | [data] copytool_out thread has finished
[2025-07-26 21:00:11] 2025-07-27 00:59:41,852 | INFO     | [payload] validate_post thread has finished
[2025-07-26 21:00:11] 2025-07-27 00:59:41,893 | INFO     | [payload] control thread has finished
[2025-07-26 21:00:11] 2025-07-27 00:59:43,748 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 21:00:11] 2025-07-27 00:59:50,381 | INFO     | job.realtimelogging is not enabled
[2025-07-26 21:00:11] 2025-07-27 00:59:51,386 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 21:00:11] 2025-07-27 00:59:53,494 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139773650323264)>', '<ExcThread(monitor, started 139773360449280)>']
[2025-07-26 21:00:11] 2025-07-27 00:59:58,518 | INFO     | all workflow threads have been joined
[2025-07-26 21:00:11] 2025-07-27 00:59:58,518 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 21:00:11] 2025-07-27 00:59:58,519 | INFO     | traces error code: 0
[2025-07-26 21:00:11] 2025-07-27 00:59:58,522 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 21:00:11] 2025-07-27 01:00:10,791 | INFO     | PID=25864 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 21:00:11] 2025-07-27 01:00:10,791 | INFO     | .. there are 2 such processes running
[2025-07-26 21:00:11] 2025-07-27 01:00:10,792 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 21:00:11] 2025-07-27 01:00:10,792 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 21:00:11] 2025-07-27 01:00:10,792 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 21:00:11] 2025-07-27 01:00:10,792 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 21:00:11] 2025-07-27 01:00:10,792 | INFO     | [monitor] control thread has ended
[2025-07-26 21:00:11] 2025-07-27 01:00:10,913 [wrapper] ==== pilot stdout END ====
[2025-07-26 21:00:11] 2025-07-27 01:00:10,916 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 21:00:11] 2025-07-27 01:00:10,919 [wrapper] pilotpid: 25864
[2025-07-26 21:00:11] 2025-07-27 01:00:10,923 [wrapper] Pilot exit status: 0
[2025-07-26 21:00:11] 2025-07-27 01:00:10,933 [wrapper] pandaids: 6745354697
[2025-07-26 21:00:11] 2025-07-27 01:00:10,960 [wrapper] cleanup supervisor_pilot  9373 25865
[2025-07-26 21:00:11] 2025-07-27 01:00:10,962 [wrapper] Test setup, not cleaning
[2025-07-26 21:00:11] 2025-07-27 01:00:10,965 [wrapper] apfmon messages muted
[2025-07-26 21:00:11] 2025-07-27 01:00:10,967 [wrapper] ==== wrapper stdout END ====
[2025-07-26 21:00:11] 2025-07-27 01:00:10,970 [wrapper] ==== wrapper stderr END ====
[2025-07-26 21:00:11]  *** Error codes and diagnostics ***
[2025-07-26 21:00:11]     "exeErrorCode": 0,
[2025-07-26 21:00:11]     "exeErrorDiag": "",
[2025-07-26 21:00:11]     "pilotErrorCode": 0,
[2025-07-26 21:00:11]     "pilotErrorDiag": "",
[2025-07-26 21:00:11]  *** Listing of results directory ***
[2025-07-26 21:00:11] total 352916
[2025-07-26 21:00:11] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 14:40 pilot3.tar.gz
[2025-07-26 21:00:11] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 15:06 queuedata.json
[2025-07-26 21:00:11] -rwx------ 1 boincer umatlas     36292 Jul 26 15:07 runpilot2-wrapper.sh
[2025-07-26 21:00:11] -rw-r--r-- 1 boincer umatlas       100 Jul 26 19:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 21:00:11] -rwxr-xr-x 1 boincer umatlas      7986 Jul 26 19:58 run_atlas
[2025-07-26 21:00:11] -rw-r--r-- 1 boincer umatlas       105 Jul 26 19:58 job.xml
[2025-07-26 21:00:11] -rw-r--r-- 2 boincer umatlas 149402068 Jul 26 19:58 EVNT.45743347._002422.pool.root.1
[2025-07-26 21:00:11] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 19:58 start_atlas.sh
[2025-07-26 21:00:11] drwxrwx--x 2 boincer umatlas      4096 Jul 26 19:58 shared
[2025-07-26 21:00:11] -rw-r--r-- 2 boincer umatlas    542888 Jul 26 19:58 input.tar.gz
[2025-07-26 21:00:11] -rw-r--r-- 1 boincer umatlas         0 Jul 26 19:58 boinc_lockfile
[2025-07-26 21:00:11] -rw-r--r-- 1 boincer umatlas      2563 Jul 26 19:58 pandaJob.out
[2025-07-26 21:00:11] -rw------- 1 boincer umatlas    980117 Jul 26 19:58 agis_schedconf.cvmfs.json
[2025-07-26 21:00:11] -rw------- 1 boincer umatlas   1593052 Jul 26 19:58 agis_ddmendpoints.agis.ALL.json
[2025-07-26 21:00:11] drwx------ 4 boincer umatlas      4096 Jul 26 19:58 pilot3
[2025-07-26 21:00:11] -rw-r--r-- 1 boincer umatlas      6050 Jul 26 20:56 init_data.xml
[2025-07-26 21:00:11] -rw------- 1 boincer umatlas 206753050 Jul 26 20:59 HITS.45743349._042871.pool.root.1
[2025-07-26 21:00:11] -rw-r--r-- 1 boincer umatlas       529 Jul 26 20:59 boinc_task_state.xml
[2025-07-26 21:00:11] -rw------- 1 boincer umatlas      1046 Jul 26 20:59 memory_monitor_summary.json
[2025-07-26 21:00:11] -rw------- 1 boincer umatlas    294981 Jul 26 20:59 log.45743349._042871.job.log.tgz.1
[2025-07-26 21:00:11] -rw------- 1 boincer umatlas      7836 Jul 26 20:59 heartbeat.json
[2025-07-26 21:00:11] -rw-r--r-- 1 boincer umatlas        27 Jul 26 20:59 wrapper_checkpoint.txt
[2025-07-26 21:00:11] -rw-r--r-- 1 boincer umatlas      8192 Jul 26 20:59 boinc_mmap_file
[2025-07-26 21:00:11] -rw------- 1 boincer umatlas        95 Jul 26 21:00 pilot_heartbeat.json
[2025-07-26 21:00:11] -rw------- 1 boincer umatlas       820 Jul 26 21:00 pilotlog.txt
[2025-07-26 21:00:11] -rw------- 1 boincer umatlas    382304 Jul 26 21:00 log.45743349._042871.job.log.1
[2025-07-26 21:00:11] -rw------- 1 boincer umatlas       357 Jul 26 21:00 output.list
[2025-07-26 21:00:11] -rw-r--r-- 1 boincer umatlas       620 Jul 26 21:00 runtime_log
[2025-07-26 21:00:11] -rw------- 1 boincer umatlas    696320 Jul 26 21:00 result.tar.gz
[2025-07-26 21:00:11] -rw------- 1 boincer umatlas       655 Jul 26 21:00 UinLDmyPzz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCuSLDmMiUx2m.diag
[2025-07-26 21:00:11] -rw-r--r-- 1 boincer umatlas      8660 Jul 26 21:00 runtime_log.err
[2025-07-26 21:00:11] -rw-r--r-- 1 boincer umatlas     22413 Jul 26 21:00 stderr.txt
[2025-07-26 21:00:11] HITS file was successfully produced:
[2025-07-26 21:00:11] -rw------- 1 boincer umatlas 206753050 Jul 26 20:59 shared/HITS.pool.root.1
[2025-07-26 21:00:11]  *** Contents of shared directory: ***
[2025-07-26 21:00:11] total 349044
[2025-07-26 21:00:11] -rw-r--r-- 2 boincer umatlas 149402068 Jul 26 19:58 ATLAS.root_0
[2025-07-26 21:00:11] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 19:58 start_atlas.sh
[2025-07-26 21:00:11] -rw-r--r-- 2 boincer umatlas    542888 Jul 26 19:58 input.tar.gz
[2025-07-26 21:00:11] -rw------- 1 boincer umatlas 206753050 Jul 26 20:59 HITS.pool.root.1
[2025-07-26 21:00:11] -rw------- 1 boincer umatlas    696320 Jul 26 21:00 result.tar.gz
21:00:13 (22210): run_atlas exited; CPU time 27265.375918
21:00:13 (22210): called boinc_finish(0)

</stderr_txt>
]]>

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