Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:51:23 (8260): wrapper (7.7.26015): starting
19:51:23 (8260): wrapper: running run_atlas (--nthreads 4)
[2025-07-26 19:51:23] Arguments: --nthreads 4
[2025-07-26 19:51:23] Threads: 4
[2025-07-26 19:51:23] Checking for CVMFS
[2025-07-26 19:51:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 19:51:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 19:51:23] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 19:51:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 19:51:23] 2.11.2.0 2943 527961 99624 148793 3 57 20256692 20275201 1 130560 0 66786944 99.970 23640052 21932 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 19:51:23] CVMFS is ok
[2025-07-26 19:51:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 19:51:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 19:51:23] Further information can be found at the LHC@home message board.
[2025-07-26 19:51:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 19:51:23] Checking for apptainer binary...
[2025-07-26 19:51:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 19:51:23] Running /usr/bin/apptainer --version
[2025-07-26 19:51:24] apptainer version 1.3.2-1.el7
[2025-07-26 19:51:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 19:51:24] c-205-34.aglt2.org
[2025-07-26 19:51:24] apptainer works
[2025-07-26 19:51:24] Set ATHENA_PROC_NUMBER=4
[2025-07-26 19:51:24] Set ATHENA_CORE_NUMBER=4
[2025-07-26 19:51:24] Starting ATLAS job with PandaID=6745775438
[2025-07-26 19:51:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 21:40:17]  *** The last 200 lines of the pilot log: ***
[2025-07-26 21:40:17] 2025-07-27 01:39:41,990 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 21:40:17] 2025-07-27 01:39:43,005 | INFO     | PID=11850 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 21:40:17] 2025-07-27 01:39:43,500 | INFO     | monitor loop #491: job 0:6745775438 is in state 'finished'
[2025-07-26 21:40:17] 2025-07-27 01:39:43,500 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 21:40:17] 2025-07-27 01:39:45,156 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 21:40:17] 2025-07-27 01:39:45,157 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 1600.52425
[2025-07-26 21:40:17] 2025-07-27 01:39:45,158 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745775438/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 21:40:17] 2025-07-27 01:39:45,158 | INFO     | extracted standard info from prmon json
[2025-07-26 21:40:17] 2025-07-27 01:39:45,158 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 21:40:17] 2025-07-27 01:39:45,159 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 21:40:17] 2025-07-27 01:39:45,159 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 21:40:17] 2025-07-27 01:39:45,159 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 21:40:17] 2025-07-27 01:39:45,161 | INFO     | fitting pss+swap vs Time
[2025-07-26 21:40:17] 2025-07-27 01:39:45,161 | INFO     | sum of square deviations: 369281342.5
[2025-07-26 21:40:17] 2025-07-27 01:39:45,161 | INFO     | sum of deviations: -4657464985.0
[2025-07-26 21:40:17] 2025-07-27 01:39:45,161 | INFO     | mean x: 1753577117.5
[2025-07-26 21:40:17] 2025-07-27 01:39:45,161 | INFO     | mean y: 2357020.0
[2025-07-26 21:40:17] 2025-07-27 01:39:45,161 | INFO     | -- intersect: 22118892797.199413
[2025-07-26 21:40:17] 2025-07-27 01:39:45,162 | INFO     | intersect: 22118892797.199413
[2025-07-26 21:40:17] 2025-07-27 01:39:45,162 | INFO     | chi2: 1.1928093980936822
[2025-07-26 21:40:17] 2025-07-27 01:39:45,162 | INFO     | sum of square deviations: 319447850.0
[2025-07-26 21:40:17] 2025-07-27 01:39:45,162 | INFO     | sum of deviations: -4301023379.999999
[2025-07-26 21:40:17] 2025-07-27 01:39:45,162 | INFO     | mean x: 1753576965.0
[2025-07-26 21:40:17] 2025-07-27 01:39:45,162 | INFO     | mean y: 2358111.613861386
[2025-07-26 21:40:17] 2025-07-27 01:39:45,163 | INFO     | -- intersect: 23612395008.38571
[2025-07-26 21:40:17] 2025-07-27 01:39:45,163 | INFO     | intersect: 23612395008.38571
[2025-07-26 21:40:17] 2025-07-27 01:39:45,163 | INFO     | chi2: 1.1908407679901611
[2025-07-26 21:40:17] 2025-07-27 01:39:45,163 | INFO     | current chi2=1.1908407679901611 (change=0.16504146485325502 %)
[2025-07-26 21:40:17] 2025-07-27 01:39:45,163 | INFO     | right removable region: 100
[2025-07-26 21:40:17] 2025-07-27 01:39:45,163 | INFO     | sum of square deviations: 319447850.0
[2025-07-26 21:40:17] 2025-07-27 01:39:45,164 | INFO     | sum of deviations: -12055333314.999998
[2025-07-26 21:40:17] 2025-07-27 01:39:45,164 | INFO     | mean x: 1753577270.0
[2025-07-26 21:40:17] 2025-07-27 01:39:45,164 | INFO     | mean y: 2378627.1881188117
[2025-07-26 21:40:17] 2025-07-27 01:39:45,164 | INFO     | -- intersect: 66178934467.077934
[2025-07-26 21:40:17] 2025-07-27 01:39:45,164 | INFO     | intersect: 66178934467.077934
[2025-07-26 21:40:17] 2025-07-27 01:39:45,164 | INFO     | chi2: 0.11555593313862866
[2025-07-26 21:40:17] 2025-07-27 01:39:45,164 | INFO     | current chi2=0.11555593313862866 (change=90.31228850784481 %)
[2025-07-26 21:40:17] 2025-07-27 01:39:45,164 | INFO     | sum of square deviations: 274312120.0
[2025-07-26 21:40:17] 2025-07-27 01:39:45,165 | INFO     | sum of deviations: -8786123806.5
[2025-07-26 21:40:17] 2025-07-27 01:39:45,165 | INFO     | mean x: 1753577422.5
[2025-07-26 21:40:17] 2025-07-27 01:39:45,165 | INFO     | mean y: 2367559.4895833335
[2025-07-26 21:40:17] 2025-07-27 01:39:45,165 | INFO     | -- intersect: 56168855348.538635
[2025-07-26 21:40:17] 2025-07-27 01:39:45,165 | INFO     | intersect: 56168855348.538635
[2025-07-26 21:40:17] 2025-07-27 01:39:45,165 | INFO     | chi2: 0.10550950038365392
[2025-07-26 21:40:17] 2025-07-27 01:39:45,165 | INFO     | current chi2=0.10550950038365392 (change=8.693999937608021 %)
[2025-07-26 21:40:17] 2025-07-27 01:39:45,165 | INFO     | left removable region: 20
[2025-07-26 21:40:17] 2025-07-27 01:39:45,165 | INFO     | sum of square deviations: 158737860.0
[2025-07-26 21:40:17] 2025-07-27 01:39:45,166 | INFO     | sum of deviations: -1629519504.5
[2025-07-26 21:40:17] 2025-07-27 01:39:45,166 | INFO     | mean x: 1753577544.5
[2025-07-26 21:40:17] 2025-07-27 01:39:45,166 | INFO     | mean y: 2339725.6875
[2025-07-26 21:40:17] 2025-07-27 01:39:45,166 | INFO     | -- intersect: 18003645850.237537
[2025-07-26 21:40:17] 2025-07-27 01:39:45,166 | INFO     | intersect: 18003645850.237537
[2025-07-26 21:40:17] 2025-07-27 01:39:45,166 | INFO     | chi2: 0.041014201515328384
[2025-07-26 21:40:17] 2025-07-27 01:39:45,166 | INFO     | -- intersect: 18003645850.237537
[2025-07-26 21:40:17] 2025-07-27 01:39:45,166 | INFO     | current memory leak: -10.27 B/s (using 80 data points, chi2=0.04)
[2025-07-26 21:40:17] 2025-07-27 01:39:45,167 | INFO     | could have reported an average CPU frequency of 2781 MHz (7 samples)
[2025-07-26 21:40:17] 2025-07-27 01:39:45,167 | INFO     | ..............................
[2025-07-26 21:40:17] 2025-07-27 01:39:45,167 | INFO     | . Timing measurements:
[2025-07-26 21:40:17] 2025-07-27 01:39:45,167 | INFO     | . get job = 0 s
[2025-07-26 21:40:17] 2025-07-27 01:39:45,167 | INFO     | . initial setup = 2 s
[2025-07-26 21:40:17] 2025-07-27 01:39:45,167 | INFO     | . payload setup = 4 s
[2025-07-26 21:40:17] 2025-07-27 01:39:45,167 | INFO     | . stage-in = 0 s
[2025-07-26 21:40:17] 2025-07-27 01:39:45,167 | INFO     | . payload execution = 6464 s
[2025-07-26 21:40:17] 2025-07-27 01:39:45,167 | INFO     | . stage-out = 0 s
[2025-07-26 21:40:17] 2025-07-27 01:39:45,167 | INFO     | . log creation = 0 s
[2025-07-26 21:40:17] 2025-07-27 01:39:45,167 | INFO     | ..............................
[2025-07-26 21:40:17] 2025-07-27 01:39:45,216 | INFO     | 
[2025-07-26 21:40:17] 2025-07-27 01:39:45,216 | INFO     | job summary report
[2025-07-26 21:40:17] 2025-07-27 01:39:45,216 | INFO     | --------------------------------------------------
[2025-07-26 21:40:17] 2025-07-27 01:39:45,216 | INFO     | PanDA job id: 6745775438
[2025-07-26 21:40:17] 2025-07-27 01:39:45,216 | INFO     | task id: 45743349
[2025-07-26 21:40:17] 2025-07-27 01:39:45,216 | INFO     | errors: (none)
[2025-07-26 21:40:17] 2025-07-27 01:39:45,216 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 21:40:17] 2025-07-27 01:39:45,216 | INFO     | pilot state: finished 
[2025-07-26 21:40:17] 2025-07-27 01:39:45,216 | INFO     | transexitcode: 0
[2025-07-26 21:40:17] 2025-07-27 01:39:45,216 | INFO     | exeerrorcode: 0
[2025-07-26 21:40:17] 2025-07-27 01:39:45,216 | INFO     | exeerrordiag: 
[2025-07-26 21:40:17] 2025-07-27 01:39:45,216 | INFO     | exitcode: 0
[2025-07-26 21:40:17] 2025-07-27 01:39:45,216 | INFO     | exitmsg: OK
[2025-07-26 21:40:17] 2025-07-27 01:39:45,216 | INFO     | cpuconsumptiontime: 25038 s
[2025-07-26 21:40:17] 2025-07-27 01:39:45,217 | INFO     | nevents: 400
[2025-07-26 21:40:17] 2025-07-27 01:39:45,217 | INFO     | neventsw: 0
[2025-07-26 21:40:17] 2025-07-27 01:39:45,217 | INFO     | pid: 18246
[2025-07-26 21:40:17] 2025-07-27 01:39:45,217 | INFO     | pgrp: 18246
[2025-07-26 21:40:17] 2025-07-27 01:39:45,217 | INFO     | corecount: 4
[2025-07-26 21:40:17] 2025-07-27 01:39:45,217 | INFO     | event service: False
[2025-07-26 21:40:17] 2025-07-27 01:39:45,217 | INFO     | sizes: {0: 2397473, 2: 2397735, 11: 2397763, 6472: 2424945, 6473: 2433943, 6475: 2433999, 6479: 2434321}
[2025-07-26 21:40:17] 2025-07-27 01:39:45,217 | INFO     | --------------------------------------------------
[2025-07-26 21:40:17] 2025-07-27 01:39:45,217 | INFO     | 
[2025-07-26 21:40:17] 2025-07-27 01:39:45,217 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 21:40:17] 2025-07-27 01:39:45,228 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 21:40:17] 2025-07-27 01:39:45,228 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 21:40:17] 2025-07-27 01:39:45,228 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 21:40:17] 2025-07-27 01:39:45,228 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 21:40:17] 2025-07-27 01:39:45,228 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 21:40:17] 2025-07-27 01:39:45,228 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 21:40:17] 2025-07-27 01:39:45,229 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 21:40:17] 2025-07-27 01:39:45,229 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 21:40:17] 2025-07-27 01:39:45,229 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 21:40:17] 2025-07-27 01:39:45,229 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 21:40:17] 2025-07-27 01:39:45,229 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 21:40:17] 2025-07-27 01:39:45,229 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 21:40:17] 2025-07-27 01:39:45,229 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 21:40:17] 2025-07-27 01:39:45,229 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 21:40:17] 2025-07-27 01:39:45,229 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 21:40:17] 2025-07-27 01:39:45,229 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 21:40:17] 2025-07-27 01:39:45,229 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 21:40:17] 2025-07-27 01:39:45,229 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 21:40:17] 2025-07-27 01:39:45,229 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 21:40:17] 2025-07-27 01:39:45,229 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 21:40:17] 2025-07-27 01:39:45,229 | INFO     | job 6745775438 has completed (purged errors)
[2025-07-26 21:40:17] 2025-07-27 01:39:45,229 | INFO     | overall cleanup function is called
[2025-07-26 21:40:17] 2025-07-27 01:39:46,232 | INFO     | --- collectZombieJob: --- 10, [18246]
[2025-07-26 21:40:17] 2025-07-27 01:39:46,232 | INFO     | zombie collector waiting for pid 18246
[2025-07-26 21:40:17] 2025-07-27 01:39:46,249 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 21:40:17] 2025-07-27 01:39:46,249 | INFO     | collected zombie processes
[2025-07-26 21:40:17] 2025-07-27 01:39:46,249 | INFO     | will attempt to kill all subprocesses of pid=18246
[2025-07-26 21:40:17] 2025-07-27 01:39:46,301 | INFO     | process IDs to be killed: [18246] (in reverse order)
[2025-07-26 21:40:17] 2025-07-27 01:39:46,323 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 21:40:17] 2025-07-27 01:39:46,323 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 21:40:17] 2025-07-27 01:39:46,324 | INFO     | did not find any defunct processes belonging to 18246
[2025-07-26 21:40:17] 2025-07-27 01:39:46,324 | INFO     | did not find any defunct processes belonging to 18246
[2025-07-26 21:40:17] 2025-07-27 01:39:46,325 | INFO     | ready for new job
[2025-07-26 21:40:17] 2025-07-27 01:39:46,325 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 21:40:17] 2025-07-27 01:39:46,326 | INFO     | ***************************************
[2025-07-26 21:40:17] 2025-07-27 01:39:46,326 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 21:40:17] 2025-07-27 01:39:46,326 | INFO     | ***************************************
[2025-07-26 21:40:17] 2025-07-27 01:39:46,326 | INFO     | 
[2025-07-26 21:40:17] 2025-07-27 01:39:46,326 | INFO     | architecture information:
[2025-07-26 21:40:17] 2025-07-27 01:39:46,326 | INFO     | executing command: cat /etc/os-release
[2025-07-26 21:40:17] 2025-07-27 01:39:46,334 | INFO     | cat /etc/os-release:
[2025-07-26 21:40:17] NAME="CentOS Linux"
[2025-07-26 21:40:17] VERSION="7 (Core)"
[2025-07-26 21:40:17] ID="centos"
[2025-07-26 21:40:17] ID_LIKE="rhel fedora"
[2025-07-26 21:40:17] VERSION_ID="7"
[2025-07-26 21:40:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 21:40:17] ANSI_COLOR="0;31"
[2025-07-26 21:40:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 21:40:17] HOME_URL="https://www.centos.org/"
[2025-07-26 21:40:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 21:40:17] 
[2025-07-26 21:40:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 21:40:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 21:40:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 21:40:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 21:40:17] 
[2025-07-26 21:40:17] 2025-07-27 01:39:46,334 | INFO     | ***************************************
[2025-07-26 21:40:17] 2025-07-27 01:39:46,837 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 21:40:17] 2025-07-27 01:39:46,854 | INFO     | sufficient remaining disk space (29503782912 B)
[2025-07-26 21:40:17] 2025-07-27 01:39:46,855 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 21:40:17] 2025-07-27 01:39:46,855 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 21:40:17] 2025-07-27 01:39:46,855 | INFO     | update_server=False
[2025-07-26 21:40:17] 2025-07-27 01:39:46,856 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 21:40:17] 2025-07-27 01:39:46,856 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 21:40:17] 2025-07-27 01:39:46,856 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 21:40:17] 2025-07-27 01:39:46,863 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 21:40:17] 2025-07-27 01:39:47,008 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 21:40:17] 2025-07-27 01:39:47,008 | INFO     | aborting loop
[2025-07-26 21:40:17] 2025-07-27 01:39:47,132 | INFO     | all payload control threads have been joined
[2025-07-26 21:40:17] 2025-07-27 01:39:47,787 | INFO     | all data control threads have been joined
[2025-07-26 21:40:17] 2025-07-27 01:39:47,861 | INFO     | [job] retrieve thread has finished
[2025-07-26 21:40:17] 2025-07-27 01:39:47,862 | INFO     | [job] queue monitor thread has finished
[2025-07-26 21:40:17] 2025-07-27 01:39:47,915 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 21:40:17] 2025-07-27 01:39:48,013 | INFO     | [job] job monitor thread has finished
[2025-07-26 21:40:17] 2025-07-27 01:39:48,074 | INFO     | [payload] failed_post thread has finished
[2025-07-26 21:40:17] 2025-07-27 01:39:48,121 | INFO     | all job control threads have been joined
[2025-07-26 21:40:17] 2025-07-27 01:39:48,137 | INFO     | [payload] control thread has finished
[2025-07-26 21:40:17] 2025-07-27 01:39:48,195 | INFO     | [data] copytool_in thread has finished
[2025-07-26 21:40:17] 2025-07-27 01:39:48,467 | INFO     | [job] validate thread has finished
[2025-07-26 21:40:17] 2025-07-27 01:39:48,469 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 21:40:17] 2025-07-27 01:39:48,470 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 21:40:17] 2025-07-27 01:39:48,607 | INFO     | [payload] validate_post thread has finished
[2025-07-26 21:40:17] 2025-07-27 01:39:48,792 | INFO     | [data] control thread has finished
[2025-07-26 21:40:17] 2025-07-27 01:39:48,861 | INFO     | [data] copytool_out thread has finished
[2025-07-26 21:40:17] 2025-07-27 01:39:49,126 | INFO     | [job] control thread has finished
[2025-07-26 21:40:17] 2025-07-27 01:39:50,866 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 21:40:17] 2025-07-27 01:39:57,303 | INFO     | job.realtimelogging is not enabled
[2025-07-26 21:40:17] 2025-07-27 01:39:58,308 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 21:40:17] 2025-07-27 01:39:58,668 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140240122754880)>', '<ExcThread(monitor, started 140239825770240)>']
[2025-07-26 21:40:17] 2025-07-27 01:40:03,694 | INFO     | all workflow threads have been joined
[2025-07-26 21:40:17] 2025-07-27 01:40:03,694 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 21:40:17] 2025-07-27 01:40:03,694 | INFO     | traces error code: 0
[2025-07-26 21:40:17] 2025-07-27 01:40:03,695 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 21:40:17] 2025-07-27 01:40:17,123 | INFO     | PID=11850 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 21:40:17] 2025-07-27 01:40:17,123 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 21:40:17] 2025-07-27 01:40:17,123 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 21:40:17] 2025-07-27 01:40:17,123 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 21:40:17] 2025-07-27 01:40:17,123 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 21:40:17] 2025-07-27 01:40:17,123 | INFO     | [monitor] control thread has ended
[2025-07-26 21:40:17] 2025-07-27 01:40:17,178 [wrapper] ==== pilot stdout END ====
[2025-07-26 21:40:17] 2025-07-27 01:40:17,180 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 21:40:17] 2025-07-27 01:40:17,182 [wrapper] pilotpid: 11850
[2025-07-26 21:40:17] 2025-07-27 01:40:17,184 [wrapper] Pilot exit status: 0
[2025-07-26 21:40:17] 2025-07-27 01:40:17,190 [wrapper] pandaids: 6745775438
[2025-07-26 21:40:17] 2025-07-27 01:40:17,204 [wrapper] cleanup supervisor_pilot 20116 11851
[2025-07-26 21:40:17] 2025-07-27 01:40:17,206 [wrapper] Test setup, not cleaning
[2025-07-26 21:40:17] 2025-07-27 01:40:17,208 [wrapper] apfmon messages muted
[2025-07-26 21:40:17] 2025-07-27 01:40:17,210 [wrapper] ==== wrapper stdout END ====
[2025-07-26 21:40:17] 2025-07-27 01:40:17,211 [wrapper] ==== wrapper stderr END ====
[2025-07-26 21:40:17]  *** Error codes and diagnostics ***
[2025-07-26 21:40:17]     "exeErrorCode": 0,
[2025-07-26 21:40:17]     "exeErrorDiag": "",
[2025-07-26 21:40:17]     "pilotErrorCode": 0,
[2025-07-26 21:40:17]     "pilotErrorDiag": "",
[2025-07-26 21:40:17]  *** Listing of results directory ***
[2025-07-26 21:40:17] total 357424
[2025-07-26 21:40:17] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 17:23 pilot3.tar.gz
[2025-07-26 21:40:17] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 17:30 queuedata.json
[2025-07-26 21:40:17] -rwx------ 1 boincer umatlas     36292 Jul 26 17:31 runpilot2-wrapper.sh
[2025-07-26 21:40:17] -rw-r--r-- 1 boincer umatlas       100 Jul 26 19:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 21:40:17] -rwxr-xr-x 1 boincer umatlas      7986 Jul 26 19:51 run_atlas
[2025-07-26 21:40:17] -rw-r--r-- 1 boincer umatlas       105 Jul 26 19:51 job.xml
[2025-07-26 21:40:17] -rw-r--r-- 2 boincer umatlas 151488423 Jul 26 19:51 EVNT.45743347._002563.pool.root.1
[2025-07-26 21:40:17] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 19:51 start_atlas.sh
[2025-07-26 21:40:17] drwxrwx--x 2 boincer umatlas      4096 Jul 26 19:51 shared
[2025-07-26 21:40:17] -rw-r--r-- 2 boincer umatlas    542893 Jul 26 19:51 input.tar.gz
[2025-07-26 21:40:17] -rw-r--r-- 1 boincer umatlas         0 Jul 26 19:51 boinc_lockfile
[2025-07-26 21:40:17] -rw-r--r-- 1 boincer umatlas      2562 Jul 26 19:51 pandaJob.out
[2025-07-26 21:40:17] -rw------- 1 boincer umatlas    980117 Jul 26 19:51 agis_schedconf.cvmfs.json
[2025-07-26 21:40:17] -rw------- 1 boincer umatlas   1593052 Jul 26 19:51 agis_ddmendpoints.agis.ALL.json
[2025-07-26 21:40:17] drwx------ 4 boincer umatlas      4096 Jul 26 19:51 pilot3
[2025-07-26 21:40:17] -rw-r--r-- 1 boincer umatlas      6153 Jul 26 21:38 init_data.xml
[2025-07-26 21:40:17] -rw------- 1 boincer umatlas 208918936 Jul 26 21:39 HITS.45743349._044805.pool.root.1
[2025-07-26 21:40:17] -rw-r--r-- 1 boincer umatlas       530 Jul 26 21:39 boinc_task_state.xml
[2025-07-26 21:40:17] -rw------- 1 boincer umatlas      1042 Jul 26 21:39 memory_monitor_summary.json
[2025-07-26 21:40:17] -rw------- 1 boincer umatlas    248245 Jul 26 21:39 log.45743349._044805.job.log.tgz.1
[2025-07-26 21:40:17] -rw------- 1 boincer umatlas      7840 Jul 26 21:39 heartbeat.json
[2025-07-26 21:40:17] -rw-r--r-- 1 boincer umatlas      8192 Jul 26 21:39 boinc_mmap_file
[2025-07-26 21:40:17] -rw-r--r-- 1 boincer umatlas        27 Jul 26 21:39 wrapper_checkpoint.txt
[2025-07-26 21:40:17] -rw------- 1 boincer umatlas        95 Jul 26 21:40 pilot_heartbeat.json
[2025-07-26 21:40:17] -rw------- 1 boincer umatlas       745 Jul 26 21:40 pilotlog.txt
[2025-07-26 21:40:17] -rw------- 1 boincer umatlas    611643 Jul 26 21:40 log.45743349._044805.job.log.1
[2025-07-26 21:40:17] -rw------- 1 boincer umatlas       357 Jul 26 21:40 output.list
[2025-07-26 21:40:17] -rw-r--r-- 1 boincer umatlas       620 Jul 26 21:40 runtime_log
[2025-07-26 21:40:17] -rw------- 1 boincer umatlas    880640 Jul 26 21:40 result.tar.gz
[2025-07-26 21:40:17] -rw------- 1 boincer umatlas       656 Jul 26 21:40 TpeMDm3e1z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0CTLDmX8VUFm.diag
[2025-07-26 21:40:17] -rw-r--r-- 1 boincer umatlas      8660 Jul 26 21:40 runtime_log.err
[2025-07-26 21:40:17] -rw-r--r-- 1 boincer umatlas     21287 Jul 26 21:40 stderr.txt
[2025-07-26 21:40:17] HITS file was successfully produced:
[2025-07-26 21:40:17] -rw------- 1 boincer umatlas 208918936 Jul 26 21:39 shared/HITS.pool.root.1
[2025-07-26 21:40:17]  *** Contents of shared directory: ***
[2025-07-26 21:40:17] total 353376
[2025-07-26 21:40:17] -rw-r--r-- 2 boincer umatlas 151488423 Jul 26 19:51 ATLAS.root_0
[2025-07-26 21:40:17] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 19:51 start_atlas.sh
[2025-07-26 21:40:17] -rw-r--r-- 2 boincer umatlas    542893 Jul 26 19:51 input.tar.gz
[2025-07-26 21:40:17] -rw------- 1 boincer umatlas 208918936 Jul 26 21:39 HITS.pool.root.1
[2025-07-26 21:40:17] -rw------- 1 boincer umatlas    880640 Jul 26 21:40 result.tar.gz
21:40:19 (8260): run_atlas exited; CPU time 25049.520230
21:40:19 (8260): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN