Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:09:17 (3450101): wrapper (7.7.26015): starting
21:09:17 (3450101): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 21:09:17] Arguments: --nthreads 12
[2025-07-26 21:09:17] Threads: 12
[2025-07-26 21:09:17] Checking for CVMFS
[2025-07-26 21:09:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 21:09:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 21:09:17] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 21:09:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 21:09:17] 2.12.6.0 1267368 17682 329032 148794 2 215 18611876 32935936 10628 16776704 0 33223223 99.695 64332928 29459 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 21:09:17] CVMFS is ok
[2025-07-26 21:09:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 21:09:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 21:09:17] Further information can be found at the LHC@home message board.
[2025-07-26 21:09:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 21:09:17] Checking for apptainer binary...
[2025-07-26 21:09:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 21:09:17] Running /usr/bin/apptainer --version
[2025-07-26 21:09:17] apptainer version 1.4.1-1.el9
[2025-07-26 21:09:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 21:09:18] c6-2-29-3.aglt2.org
[2025-07-26 21:09:18] apptainer works
[2025-07-26 21:09:18] Set ATHENA_PROC_NUMBER=12
[2025-07-26 21:09:18] Set ATHENA_CORE_NUMBER=12
[2025-07-26 21:09:18] Starting ATLAS job with PandaID=6745354326
[2025-07-26 21:09:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 22:31:07]  *** The last 200 lines of the pilot log: ***
[2025-07-26 22:31:07]  is_altstaged=None
[2025-07-26 22:31:07]  is_tar=False
[2025-07-26 22:31:07]  lfn=log.45743349._042503.job.log.tgz.1
[2025-07-26 22:31:07]  mtime=0
[2025-07-26 22:31:07]  protocol_id=None
[2025-07-26 22:31:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 22:31:07]  replicas=None
[2025-07-26 22:31:07]  scope=mc23_13p6TeV
[2025-07-26 22:31:07]  status=None
[2025-07-26 22:31:07]  status_code=0
[2025-07-26 22:31:07]  storage_token=
[2025-07-26 22:31:07]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745354326/log.45743349._042503.job.log.tgz.1
[2025-07-26 22:31:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3f/63/log.45743349._042503.job.log.tgz.1
[2025-07-26 22:31:07]  workdir=None
[2025-07-26 22:31:07] ]
[2025-07-26 22:31:07] 2025-07-27 02:30:29,234 | INFO     | transferring file log.45743349._042503.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745354326/log.45743349._042503.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 22:31:07] 2025-07-27 02:30:29,234 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745354326/log.45743349._042503.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._042503.job
[2025-07-26 22:31:07] 2025-07-27 02:30:29,256 | INFO     | adding to output.list: log.45743349._042503.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3f/63/log.45743349._042503.job.log.tg
[2025-07-26 22:31:07] 2025-07-27 02:30:29,257 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 22:31:07] 2025-07-27 02:30:29,257 | INFO     | summary of transferred files:
[2025-07-26 22:31:07] 2025-07-27 02:30:29,257 | INFO     |  -- lfn=log.45743349._042503.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 22:31:07] 2025-07-27 02:30:29,258 | INFO     | stage-out finished correctly
[2025-07-26 22:31:07] 2025-07-27 02:30:29,341 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 22:31:07] 2025-07-27 02:30:29,444 | INFO     | job 6745354326 has state=finished
[2025-07-26 22:31:07] 2025-07-27 02:30:29,445 | INFO     | preparing for final server update for job 6745354326 in state='finished'
[2025-07-26 22:31:07] 2025-07-27 02:30:29,445 | INFO     | this job has now completed (state=finished)
[2025-07-26 22:31:07] 2025-07-27 02:30:29,445 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 22:31:07] 2025-07-27 02:30:29,445 | INFO     | log transfer has been attempted: DONE
[2025-07-26 22:31:07] 2025-07-27 02:30:29,445 | INFO     | job 6745354326 has finished - writing final server update
[2025-07-26 22:31:07] 2025-07-27 02:30:29,446 | INFO     | total number of processed events: 400 (read)
[2025-07-26 22:31:07] 2025-07-27 02:30:29,447 | INFO     | executing command: lscpu
[2025-07-26 22:31:07] 2025-07-27 02:30:29,504 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 22:31:07] 2025-07-27 02:30:31,541 | INFO     | monitor loop #351: job 0:6745354326 is in state 'finished'
[2025-07-26 22:31:07] 2025-07-27 02:30:31,541 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 22:31:07] 2025-07-27 02:30:34,044 | INFO     | monitor loop #352: job 0:6745354326 is in state 'finished'
[2025-07-26 22:31:07] 2025-07-27 02:30:34,045 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 22:31:07] 2025-07-27 02:30:34,647 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 22:31:07] 2025-07-27 02:30:34,651 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2556.7615714285716
[2025-07-26 22:31:07] 2025-07-27 02:30:34,660 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745354326/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 22:31:07] 2025-07-27 02:30:34,661 | INFO     | extracted standard info from prmon json
[2025-07-26 22:31:07] 2025-07-27 02:30:34,661 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 22:31:07] 2025-07-27 02:30:34,661 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 22:31:07] 2025-07-27 02:30:34,662 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 22:31:07] 2025-07-27 02:30:34,662 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 22:31:07] 2025-07-27 02:30:34,664 | INFO     | fitting pss+swap vs Time
[2025-07-26 22:31:07] 2025-07-27 02:30:34,664 | INFO     | sum of square deviations: 120618235.1232876
[2025-07-26 22:31:07] 2025-07-27 02:30:34,664 | INFO     | sum of deviations: 1422851995.4657526
[2025-07-26 22:31:07] 2025-07-27 02:30:34,664 | INFO     | mean x: 1753581105.109589
[2025-07-26 22:31:07] 2025-07-27 02:30:34,664 | INFO     | mean y: 2428425.191780822
[2025-07-26 22:31:07] 2025-07-27 02:30:34,665 | INFO     | -- intersect: -20683385556.963688
[2025-07-26 22:31:07] 2025-07-27 02:30:34,665 | INFO     | intersect: -20683385556.963688
[2025-07-26 22:31:07] 2025-07-27 02:30:34,665 | INFO     | chi2: 0.08108738001880558
[2025-07-26 22:31:07] 2025-07-27 02:30:34,665 | INFO     | -- intersect: -20683385556.963688
[2025-07-26 22:31:07] 2025-07-27 02:30:34,666 | INFO     | current memory leak: 11.80 B/s (using 73 data points, chi2=0.08)
[2025-07-26 22:31:07] 2025-07-27 02:30:34,666 | INFO     | could have reported an average CPU frequency of 2598 MHz (6 samples)
[2025-07-26 22:31:07] 2025-07-27 02:30:34,666 | INFO     | ..............................
[2025-07-26 22:31:07] 2025-07-27 02:30:34,666 | INFO     | . Timing measurements:
[2025-07-26 22:31:07] 2025-07-27 02:30:34,666 | INFO     | . get job = 0 s
[2025-07-26 22:31:07] 2025-07-27 02:30:34,666 | INFO     | . initial setup = 3 s
[2025-07-26 22:31:07] 2025-07-27 02:30:34,666 | INFO     | . payload setup = 9 s
[2025-07-26 22:31:07] 2025-07-27 02:30:34,666 | INFO     | . stage-in = 0 s
[2025-07-26 22:31:07] 2025-07-27 02:30:34,666 | INFO     | . payload execution = 4826 s
[2025-07-26 22:31:07] 2025-07-27 02:30:34,666 | INFO     | . stage-out = 0 s
[2025-07-26 22:31:07] 2025-07-27 02:30:34,666 | INFO     | . log creation = 0 s
[2025-07-26 22:31:07] 2025-07-27 02:30:34,666 | INFO     | ..............................
[2025-07-26 22:31:07] 2025-07-27 02:30:34,755 | INFO     | 
[2025-07-26 22:31:07] 2025-07-27 02:30:34,755 | INFO     | job summary report
[2025-07-26 22:31:07] 2025-07-27 02:30:34,755 | INFO     | --------------------------------------------------
[2025-07-26 22:31:07] 2025-07-27 02:30:34,755 | INFO     | PanDA job id: 6745354326
[2025-07-26 22:31:07] 2025-07-27 02:30:34,755 | INFO     | task id: 45743349
[2025-07-26 22:31:07] 2025-07-27 02:30:34,755 | INFO     | errors: (none)
[2025-07-26 22:31:07] 2025-07-27 02:30:34,756 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 22:31:07] 2025-07-27 02:30:34,756 | INFO     | pilot state: finished 
[2025-07-26 22:31:07] 2025-07-27 02:30:34,756 | INFO     | transexitcode: 0
[2025-07-26 22:31:07] 2025-07-27 02:30:34,756 | INFO     | exeerrorcode: 0
[2025-07-26 22:31:07] 2025-07-27 02:30:34,756 | INFO     | exeerrordiag: 
[2025-07-26 22:31:07] 2025-07-27 02:30:34,756 | INFO     | exitcode: 0
[2025-07-26 22:31:07] 2025-07-27 02:30:34,756 | INFO     | exitmsg: OK
[2025-07-26 22:31:07] 2025-07-27 02:30:34,756 | INFO     | cpuconsumptiontime: 48510 s
[2025-07-26 22:31:07] 2025-07-27 02:30:34,756 | INFO     | nevents: 400
[2025-07-26 22:31:07] 2025-07-27 02:30:34,756 | INFO     | neventsw: 0
[2025-07-26 22:31:07] 2025-07-27 02:30:34,756 | INFO     | pid: 3460569
[2025-07-26 22:31:07] 2025-07-27 02:30:34,757 | INFO     | pgrp: 3460569
[2025-07-26 22:31:07] 2025-07-27 02:30:34,757 | INFO     | corecount: 12
[2025-07-26 22:31:07] 2025-07-27 02:30:34,757 | INFO     | event service: False
[2025-07-26 22:31:07] 2025-07-27 02:30:34,757 | INFO     | sizes: {0: 2397304, 1: 2397503, 6: 2397765, 11: 2397793, 4839: 2423892, 4840: 2432890, 4841: 2433074, 4846: 2433268}
[2025-07-26 22:31:07] 2025-07-27 02:30:34,757 | INFO     | --------------------------------------------------
[2025-07-26 22:31:07] 2025-07-27 02:30:34,757 | INFO     | 
[2025-07-26 22:31:07] 2025-07-27 02:30:34,757 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 22:31:07] 2025-07-27 02:30:34,779 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 22:31:07] 2025-07-27 02:30:34,779 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 22:31:07] 2025-07-27 02:30:34,779 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 22:31:07] 2025-07-27 02:30:34,779 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 22:31:07] 2025-07-27 02:30:34,779 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 22:31:07] 2025-07-27 02:30:34,779 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 22:31:07] 2025-07-27 02:30:34,780 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 22:31:07] 2025-07-27 02:30:34,780 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 22:31:07] 2025-07-27 02:30:34,780 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 22:31:07] 2025-07-27 02:30:34,780 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 22:31:07] 2025-07-27 02:30:34,780 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 22:31:07] 2025-07-27 02:30:34,780 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 22:31:07] 2025-07-27 02:30:34,780 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 22:31:07] 2025-07-27 02:30:34,780 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 22:31:07] 2025-07-27 02:30:34,780 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 22:31:07] 2025-07-27 02:30:34,780 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 22:31:07] 2025-07-27 02:30:34,780 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 22:31:07] 2025-07-27 02:30:34,780 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 22:31:07] 2025-07-27 02:30:34,780 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 22:31:07] 2025-07-27 02:30:34,780 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 22:31:07] 2025-07-27 02:30:34,780 | INFO     | job 6745354326 has completed (purged errors)
[2025-07-26 22:31:07] 2025-07-27 02:30:34,780 | INFO     | overall cleanup function is called
[2025-07-26 22:31:07] 2025-07-27 02:30:35,789 | INFO     | --- collectZombieJob: --- 10, [3460569]
[2025-07-26 22:31:07] 2025-07-27 02:30:35,789 | INFO     | zombie collector waiting for pid 3460569
[2025-07-26 22:31:07] 2025-07-27 02:30:35,789 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 22:31:07] 2025-07-27 02:30:35,789 | INFO     | collected zombie processes
[2025-07-26 22:31:07] 2025-07-27 02:30:35,790 | INFO     | will attempt to kill all subprocesses of pid=3460569
[2025-07-26 22:31:07] 2025-07-27 02:30:36,061 | INFO     | process IDs to be killed: [3460569] (in reverse order)
[2025-07-26 22:31:07] 2025-07-27 02:30:36,189 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 22:31:07] 2025-07-27 02:30:36,189 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 22:31:07] 2025-07-27 02:30:36,202 | INFO     | did not find any defunct processes belonging to 3460569
[2025-07-26 22:31:07] 2025-07-27 02:30:36,216 | INFO     | did not find any defunct processes belonging to 3460569
[2025-07-26 22:31:07] 2025-07-27 02:30:36,217 | INFO     | ready for new job
[2025-07-26 22:31:07] 2025-07-27 02:30:36,217 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 22:31:07] 2025-07-27 02:30:36,219 | INFO     | ***************************************
[2025-07-26 22:31:07] 2025-07-27 02:30:36,219 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 22:31:07] 2025-07-27 02:30:36,219 | INFO     | ***************************************
[2025-07-26 22:31:07] 2025-07-27 02:30:36,219 | INFO     | 
[2025-07-26 22:31:07] 2025-07-27 02:30:36,235 | INFO     | architecture information:
[2025-07-26 22:31:07] 2025-07-27 02:30:36,236 | INFO     | executing command: cat /etc/os-release
[2025-07-26 22:31:07] 2025-07-27 02:30:36,259 | INFO     | cat /etc/os-release:
[2025-07-26 22:31:07] NAME="CentOS Linux"
[2025-07-26 22:31:07] VERSION="7 (Core)"
[2025-07-26 22:31:07] ID="centos"
[2025-07-26 22:31:07] ID_LIKE="rhel fedora"
[2025-07-26 22:31:07] VERSION_ID="7"
[2025-07-26 22:31:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 22:31:07] ANSI_COLOR="0;31"
[2025-07-26 22:31:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 22:31:07] HOME_URL="https://www.centos.org/"
[2025-07-26 22:31:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 22:31:07] 
[2025-07-26 22:31:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 22:31:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 22:31:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 22:31:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 22:31:07] 
[2025-07-26 22:31:07] 2025-07-27 02:30:36,260 | INFO     | ***************************************
[2025-07-26 22:31:07] 2025-07-27 02:30:36,763 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 22:31:07] 2025-07-27 02:30:36,780 | INFO     | sufficient remaining disk space (76537659392 B)
[2025-07-26 22:31:07] 2025-07-27 02:30:36,781 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 22:31:07] 2025-07-27 02:30:36,781 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 22:31:07] 2025-07-27 02:30:36,781 | INFO     | update_server=False
[2025-07-26 22:31:07] 2025-07-27 02:30:36,781 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 22:31:07] 2025-07-27 02:30:36,809 | INFO     | all data control threads have been joined
[2025-07-26 22:31:07] 2025-07-27 02:30:37,352 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 22:31:07] 2025-07-27 02:30:37,554 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 22:31:07] 2025-07-27 02:30:37,554 | INFO     | aborting loop
[2025-07-26 22:31:07] 2025-07-27 02:30:37,602 | INFO     | all payload control threads have been joined
[2025-07-26 22:31:07] 2025-07-27 02:30:37,768 | INFO     | all job control threads have been joined
[2025-07-26 22:31:07] 2025-07-27 02:30:37,786 | INFO     | [job] retrieve thread has finished
[2025-07-26 22:31:07] 2025-07-27 02:30:37,814 | INFO     | [data] control thread has finished
[2025-07-26 22:31:07] 2025-07-27 02:30:37,841 | INFO     | [data] copytool_in thread has finished
[2025-07-26 22:31:07] 2025-07-27 02:30:38,053 | INFO     | [job] validate thread has finished
[2025-07-26 22:31:07] 2025-07-27 02:30:38,314 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 22:31:07] 2025-07-27 02:30:38,386 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 22:31:07] 2025-07-27 02:30:38,559 | INFO     | [job] job monitor thread has finished
[2025-07-26 22:31:07] 2025-07-27 02:30:38,607 | INFO     | [payload] control thread has finished
[2025-07-26 22:31:07] 2025-07-27 02:30:38,748 | INFO     | [payload] failed_post thread has finished
[2025-07-26 22:31:07] 2025-07-27 02:30:38,773 | INFO     | [job] control thread has finished
[2025-07-26 22:31:07] 2025-07-27 02:30:38,842 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 22:31:07] 2025-07-27 02:30:39,016 | INFO     | [payload] validate_post thread has finished
[2025-07-26 22:31:07] 2025-07-27 02:30:39,357 | INFO     | [data] copytool_out thread has finished
[2025-07-26 22:31:07] 2025-07-27 02:30:39,766 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 22:31:07] 2025-07-27 02:30:39,947 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 22:31:07] 2025-07-27 02:30:40,772 | INFO     | [job] queue monitor thread has finished
[2025-07-26 22:31:07] 2025-07-27 02:30:43,953 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 22:31:07] 2025-07-27 02:30:47,692 | INFO     | job.realtimelogging is not enabled
[2025-07-26 22:31:07] 2025-07-27 02:30:48,698 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 22:31:07] 2025-07-27 02:30:48,842 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140204541962048)>', '<ExcThread(monitor, started 140203838666496)>']
[2025-07-26 22:31:07] 2025-07-27 02:30:53,867 | INFO     | all workflow threads have been joined
[2025-07-26 22:31:07] 2025-07-27 02:30:53,867 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 22:31:07] 2025-07-27 02:30:53,868 | INFO     | traces error code: 0
[2025-07-26 22:31:07] 2025-07-27 02:30:53,868 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 22:31:07] 2025-07-27 02:31:06,750 | INFO     | PID=3454178 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 22:31:07] 2025-07-27 02:31:06,750 | INFO     | .. there are 15 such processes running
[2025-07-26 22:31:07] 2025-07-27 02:31:06,751 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 22:31:07] 2025-07-27 02:31:06,751 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 22:31:07] 2025-07-27 02:31:06,751 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 22:31:07] 2025-07-27 02:31:06,751 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 22:31:07] 2025-07-27 02:31:06,751 | INFO     | [monitor] control thread has ended
[2025-07-26 22:31:07] 2025-07-27 02:31:06,934 [wrapper] ==== pilot stdout END ====
[2025-07-26 22:31:07] 2025-07-27 02:31:06,938 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 22:31:07] 2025-07-27 02:31:06,942 [wrapper] pilotpid: 3454178
[2025-07-26 22:31:07] 2025-07-27 02:31:06,945 [wrapper] Pilot exit status: 0
[2025-07-26 22:31:07] 2025-07-27 02:31:06,960 [wrapper] pandaids: 6745354326
[2025-07-26 22:31:07] 2025-07-27 02:31:07,034 [wrapper] cleanup supervisor_pilot 3582729 3454179
[2025-07-26 22:31:07] 2025-07-27 02:31:07,039 [wrapper] Test setup, not cleaning
[2025-07-26 22:31:07] 2025-07-27 02:31:07,043 [wrapper] apfmon messages muted
[2025-07-26 22:31:07] 2025-07-27 02:31:07,047 [wrapper] ==== wrapper stdout END ====
[2025-07-26 22:31:07] 2025-07-27 02:31:07,051 [wrapper] ==== wrapper stderr END ====
[2025-07-26 22:31:07]  *** Error codes and diagnostics ***
[2025-07-26 22:31:07]     "exeErrorCode": 0,
[2025-07-26 22:31:07]     "exeErrorDiag": "",
[2025-07-26 22:31:07]     "pilotErrorCode": 0,
[2025-07-26 22:31:07]     "pilotErrorDiag": "",
[2025-07-26 22:31:07]  *** Listing of results directory ***
[2025-07-26 22:31:07] total 352948
[2025-07-26 22:31:07] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 14:40 pilot3.tar.gz
[2025-07-26 22:31:07] -rwx------. 1 boincer umatlas     36292 Jul 26 14:41 runpilot2-wrapper.sh
[2025-07-26 22:31:07] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 14:41 queuedata.json
[2025-07-26 22:31:07] -rw-r--r--. 1 boincer umatlas       100 Jul 26 21:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 22:31:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 21:09 run_atlas
[2025-07-26 22:31:07] -rw-r--r--. 1 boincer umatlas       105 Jul 26 21:09 job.xml
[2025-07-26 22:31:07] -rw-r--r--. 2 boincer umatlas 146442541 Jul 26 21:09 EVNT.45743347._002398.pool.root.1
[2025-07-26 22:31:07] -rw-r--r--. 2 boincer umatlas    542895 Jul 26 21:09 input.tar.gz
[2025-07-26 22:31:07] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 21:09 start_atlas.sh
[2025-07-26 22:31:07] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 21:09 shared
[2025-07-26 22:31:07] -rw-r--r--. 1 boincer umatlas         0 Jul 26 21:09 boinc_lockfile
[2025-07-26 22:31:07] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 21:09 pandaJob.out
[2025-07-26 22:31:07] -rw-------. 1 boincer umatlas    980117 Jul 26 21:09 agis_schedconf.cvmfs.json
[2025-07-26 22:31:07] -rw-------. 1 boincer umatlas   1593052 Jul 26 21:09 agis_ddmendpoints.agis.ALL.json
[2025-07-26 22:31:07] drwx------. 4 boincer umatlas      4096 Jul 26 21:09 pilot3
[2025-07-26 22:31:07] -rw-r--r--. 1 boincer umatlas      6842 Jul 26 22:28 init_data.xml
[2025-07-26 22:31:07] -rw-------. 1 boincer umatlas 209432881 Jul 26 22:29 HITS.45743349._042503.pool.root.1
[2025-07-26 22:31:07] -rw-r--r--. 1 boincer umatlas       529 Jul 26 22:29 boinc_task_state.xml
[2025-07-26 22:31:07] -rw-------. 1 boincer umatlas      1033 Jul 26 22:30 memory_monitor_summary.json
[2025-07-26 22:31:07] -rw-------. 1 boincer umatlas    362677 Jul 26 22:30 log.45743349._042503.job.log.tgz.1
[2025-07-26 22:31:07] -rw-------. 1 boincer umatlas      7816 Jul 26 22:30 heartbeat.json
[2025-07-26 22:31:07] -rw-r--r--. 1 boincer umatlas        27 Jul 26 22:31 wrapper_checkpoint.txt
[2025-07-26 22:31:07] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 22:31 boinc_mmap_file
[2025-07-26 22:31:07] -rw-------. 1 boincer umatlas       823 Jul 26 22:31 pilotlog.txt
[2025-07-26 22:31:07] -rw-------. 1 boincer umatlas        95 Jul 26 22:31 pilot_heartbeat.json
[2025-07-26 22:31:07] -rw-------. 1 boincer umatlas    471157 Jul 26 22:31 log.45743349._042503.job.log.1
[2025-07-26 22:31:07] -rw-------. 1 boincer umatlas       357 Jul 26 22:31 output.list
[2025-07-26 22:31:07] -rw-r--r--. 1 boincer umatlas       620 Jul 26 22:31 runtime_log
[2025-07-26 22:31:07] -rw-------. 1 boincer umatlas    849920 Jul 26 22:31 result.tar.gz
[2025-07-26 22:31:07] -rw-------. 1 boincer umatlas       654 Jul 26 22:31 unILDmw0yz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6pSLDmDKgh6n.diag
[2025-07-26 22:31:07] -rw-r--r--. 1 boincer umatlas      8667 Jul 26 22:31 runtime_log.err
[2025-07-26 22:31:07] -rw-r--r--. 1 boincer umatlas     21514 Jul 26 22:31 stderr.txt
[2025-07-26 22:31:07] HITS file was successfully produced:
[2025-07-26 22:31:07] -rw-------. 1 boincer umatlas 209432881 Jul 26 22:29 shared/HITS.pool.root.1
[2025-07-26 22:31:07]  *** Contents of shared directory: ***
[2025-07-26 22:31:07] total 348924
[2025-07-26 22:31:07] -rw-r--r--. 2 boincer umatlas 146442541 Jul 26 21:09 ATLAS.root_0
[2025-07-26 22:31:07] -rw-r--r--. 2 boincer umatlas    542895 Jul 26 21:09 input.tar.gz
[2025-07-26 22:31:07] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 21:09 start_atlas.sh
[2025-07-26 22:31:07] -rw-------. 1 boincer umatlas 209432881 Jul 26 22:29 HITS.pool.root.1
[2025-07-26 22:31:07] -rw-------. 1 boincer umatlas    849920 Jul 26 22:31 result.tar.gz
22:31:08 (3450101): run_atlas exited; CPU time 48580.590738
22:31:08 (3450101): called boinc_finish(0)

</stderr_txt>
]]>

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