Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:26:16 (2749161): wrapper (7.7.26015): starting
14:26:16 (2749161): wrapper: running run_atlas (--nthreads 4)
[2025-07-27 14:26:16] Arguments: --nthreads 4
[2025-07-27 14:26:16] Threads: 4
[2025-07-27 14:26:16] Checking for CVMFS
[2025-07-27 14:26:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 14:26:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 14:26:16] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 14:26:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 14:26:17] 2.9.2.0 1497516 4065 101532 148812 1 57 18495969 36864000 0 130560 0 3289167 99.991 145985 1533 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-27 14:26:17] CVMFS is ok
[2025-07-27 14:26:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 14:26:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 14:26:17] Further information can be found at the LHC@home message board.
[2025-07-27 14:26:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 14:26:17] Checking for apptainer binary...
[2025-07-27 14:26:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 14:26:17] Running /usr/bin/apptainer --version
[2025-07-27 14:26:17] apptainer version 1.4.1-1.1
[2025-07-27 14:26:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 14:26:17] belleA253c
[2025-07-27 14:26:17] apptainer works
[2025-07-27 14:26:17] Set ATHENA_PROC_NUMBER=4
[2025-07-27 14:26:17] Set ATHENA_CORE_NUMBER=4
[2025-07-27 14:26:17] Starting ATLAS job with PandaID=6745352376
[2025-07-27 14:26:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 15:43:26]  *** The last 200 lines of the pilot log: ***
[2025-07-27 15:43:26] 2025-07-27 13:42:45,705 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6745352376/log.45743349._042446.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0424
[2025-07-27 15:43:26] 2025-07-27 13:42:45,722 | INFO     | adding to output.list: log.45743349._042446.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1d/87/log.45743349._042446.job.log.tg
[2025-07-27 15:43:26] 2025-07-27 13:42:45,723 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 15:43:26] 2025-07-27 13:42:45,723 | INFO     | summary of transferred files:
[2025-07-27 15:43:26] 2025-07-27 13:42:45,723 | INFO     |  -- lfn=log.45743349._042446.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 15:43:26] 2025-07-27 13:42:45,723 | INFO     | stage-out finished correctly
[2025-07-27 15:43:26] 2025-07-27 13:42:45,806 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 15:43:26] 2025-07-27 13:42:48,309 | WARNING  | process 2759473 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 15:43:26] 2025-07-27 13:42:48,309 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745352376/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 15:43:26] 2025-07-27 13:42:48,309 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745352376/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 15:43:26] 2025-07-27 13:42:48,310 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2479686 B
[2025-07-27 15:43:26] 2025-07-27 13:42:48,310 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16032 B
[2025-07-27 15:43:26] 2025-07-27 13:42:48,310 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-27 15:43:26] 2025-07-27 13:42:48,323 | INFO     | sufficient remaining disk space (336902225920 B)
[2025-07-27 15:43:26] 2025-07-27 13:42:48,324 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-27 15:43:26] 2025-07-27 13:42:48,324 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6745352376: 2775352 B (within 2537553920 B limit)
[2025-07-27 15:43:26] 2025-07-27 13:42:48,324 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6745352376/HITS.45743349._042446.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-27 15:43:26] 2025-07-27 13:42:48,324 | INFO     | total size of present files: 0 B (workdir size: 2775352 B)
[2025-07-27 15:43:26] 2025-07-27 13:42:48,324 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6745352376/HITS.45743349._042446.pool.root.1 since it does not exist
[2025-07-27 15:43:26] 2025-07-27 13:42:48,364 | INFO     | number of running child processes to parent process 2759473: 1
[2025-07-27 15:43:26] 2025-07-27 13:42:48,364 | INFO     | maximum number of monitored processes: 6
[2025-07-27 15:43:26] 2025-07-27 13:42:48,676 | INFO     | job 6745352376 has state=finished
[2025-07-27 15:43:26] 2025-07-27 13:42:48,676 | INFO     | preparing for final server update for job 6745352376 in state='finished'
[2025-07-27 15:43:26] 2025-07-27 13:42:48,688 | INFO     | 4585s have passed since pilot start - server update state is 'RUNNING'
[2025-07-27 15:43:26] 2025-07-27 13:42:49,299 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-07-27 15:43:26] 2025-07-27 13:42:49,299 | INFO     | this job has now completed (state=finished)
[2025-07-27 15:43:26] 2025-07-27 13:42:49,299 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 15:43:26] 2025-07-27 13:42:49,300 | INFO     | log transfer has been attempted: DONE
[2025-07-27 15:43:26] 2025-07-27 13:42:49,300 | INFO     | job 6745352376 has finished - writing final server update
[2025-07-27 15:43:26] 2025-07-27 13:42:49,300 | INFO     | total number of processed events: 400 (read)
[2025-07-27 15:43:26] 2025-07-27 13:42:49,300 | INFO     | executing command: lscpu
[2025-07-27 15:43:26] 2025-07-27 13:42:49,320 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 15:43:26] 2025-07-27 13:42:50,867 | INFO     | monitor loop #353: job 0:6745352376 is in state 'finished'
[2025-07-27 15:43:26] 2025-07-27 13:42:50,867 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 15:43:26] 2025-07-27 13:42:53,370 | INFO     | monitor loop #354: job 0:6745352376 is in state 'finished'
[2025-07-27 15:43:26] 2025-07-27 13:42:53,371 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 15:43:26] 2025-07-27 13:42:53,948 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 15:43:26] 2025-07-27 13:42:53,950 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3722.2905625000003
[2025-07-27 15:43:26] 2025-07-27 13:42:53,951 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745352376/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 15:43:26] 2025-07-27 13:42:53,951 | INFO     | extracted standard info from prmon json
[2025-07-27 15:43:26] 2025-07-27 13:42:53,951 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 15:43:26] 2025-07-27 13:42:53,951 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 15:43:26] 2025-07-27 13:42:53,952 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 15:43:26] 2025-07-27 13:42:53,952 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 15:43:26] 2025-07-27 13:42:53,952 | INFO     | fitting pss+swap vs Time
[2025-07-27 15:43:26] 2025-07-27 13:42:53,952 | INFO     | sum of square deviations: 97479037.0
[2025-07-27 15:43:26] 2025-07-27 13:42:53,953 | INFO     | sum of deviations: -9829820844.0
[2025-07-27 15:43:26] 2025-07-27 13:42:53,953 | INFO     | mean x: 1753621555.5
[2025-07-27 15:43:26] 2025-07-27 13:42:53,953 | INFO     | mean y: 2559564.029411765
[2025-07-27 15:43:26] 2025-07-27 13:42:53,953 | INFO     | -- intersect: 176838382416.29666
[2025-07-27 15:43:26] 2025-07-27 13:42:53,953 | INFO     | intersect: 176838382416.29666
[2025-07-27 15:43:26] 2025-07-27 13:42:53,953 | INFO     | chi2: 0.038059690449571734
[2025-07-27 15:43:26] 2025-07-27 13:42:53,953 | INFO     | -- intersect: 176838382416.29666
[2025-07-27 15:43:26] 2025-07-27 13:42:53,953 | INFO     | current memory leak: -100.84 B/s (using 68 data points, chi2=0.04)
[2025-07-27 15:43:26] 2025-07-27 13:42:53,953 | INFO     | could have reported an average CPU frequency of 3770 MHz (6 samples)
[2025-07-27 15:43:26] 2025-07-27 13:42:53,953 | INFO     | ..............................
[2025-07-27 15:43:26] 2025-07-27 13:42:53,953 | INFO     | . Timing measurements:
[2025-07-27 15:43:26] 2025-07-27 13:42:53,953 | INFO     | . get job = 0 s
[2025-07-27 15:43:26] 2025-07-27 13:42:53,953 | INFO     | . initial setup = 1 s
[2025-07-27 15:43:26] 2025-07-27 13:42:53,953 | INFO     | . payload setup = 4 s
[2025-07-27 15:43:26] 2025-07-27 13:42:53,953 | INFO     | . stage-in = 0 s
[2025-07-27 15:43:26] 2025-07-27 13:42:53,953 | INFO     | . payload execution = 4558 s
[2025-07-27 15:43:26] 2025-07-27 13:42:53,953 | INFO     | . stage-out = 0 s
[2025-07-27 15:43:26] 2025-07-27 13:42:53,953 | INFO     | . log creation = 0 s
[2025-07-27 15:43:26] 2025-07-27 13:42:53,953 | INFO     | ..............................
[2025-07-27 15:43:26] 2025-07-27 13:42:53,994 | INFO     | 
[2025-07-27 15:43:26] 2025-07-27 13:42:53,994 | INFO     | job summary report
[2025-07-27 15:43:26] 2025-07-27 13:42:53,994 | INFO     | --------------------------------------------------
[2025-07-27 15:43:26] 2025-07-27 13:42:53,994 | INFO     | PanDA job id: 6745352376
[2025-07-27 15:43:26] 2025-07-27 13:42:53,994 | INFO     | task id: 45743349
[2025-07-27 15:43:26] 2025-07-27 13:42:53,994 | INFO     | errors: (none)
[2025-07-27 15:43:26] 2025-07-27 13:42:53,994 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 15:43:26] 2025-07-27 13:42:53,994 | INFO     | pilot state: finished 
[2025-07-27 15:43:26] 2025-07-27 13:42:53,994 | INFO     | transexitcode: 0
[2025-07-27 15:43:26] 2025-07-27 13:42:53,994 | INFO     | exeerrorcode: 0
[2025-07-27 15:43:26] 2025-07-27 13:42:53,994 | INFO     | exeerrordiag: 
[2025-07-27 15:43:26] 2025-07-27 13:42:53,994 | INFO     | exitcode: 0
[2025-07-27 15:43:26] 2025-07-27 13:42:53,994 | INFO     | exitmsg: OK
[2025-07-27 15:43:26] 2025-07-27 13:42:53,994 | INFO     | cpuconsumptiontime: 17345 s
[2025-07-27 15:43:26] 2025-07-27 13:42:53,994 | INFO     | nevents: 400
[2025-07-27 15:43:26] 2025-07-27 13:42:53,994 | INFO     | neventsw: 0
[2025-07-27 15:43:26] 2025-07-27 13:42:53,994 | INFO     | pid: 2759473
[2025-07-27 15:43:26] 2025-07-27 13:42:53,994 | INFO     | pgrp: 2759473
[2025-07-27 15:43:26] 2025-07-27 13:42:53,994 | INFO     | corecount: 4
[2025-07-27 15:43:26] 2025-07-27 13:42:53,994 | INFO     | event service: False
[2025-07-27 15:43:26] 2025-07-27 13:42:53,994 | INFO     | sizes: {0: 2397478, 4: 2397740, 11: 2397768, 4567: 2424045, 4568: 2433105, 4576: 2433271}
[2025-07-27 15:43:26] 2025-07-27 13:42:53,995 | INFO     | --------------------------------------------------
[2025-07-27 15:43:26] 2025-07-27 13:42:53,995 | INFO     | 
[2025-07-27 15:43:26] 2025-07-27 13:42:53,995 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-27 15:43:26] 2025-07-27 13:42:54,011 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 15:43:26] 2025-07-27 13:42:54,011 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 15:43:26] 2025-07-27 13:42:54,011 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 15:43:26] 2025-07-27 13:42:54,011 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 15:43:26] 2025-07-27 13:42:54,011 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 15:43:26] 2025-07-27 13:42:54,011 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 15:43:26] 2025-07-27 13:42:54,011 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 15:43:26] 2025-07-27 13:42:54,011 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 15:43:26] 2025-07-27 13:42:54,011 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 15:43:26] 2025-07-27 13:42:54,011 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 15:43:26] 2025-07-27 13:42:54,011 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 15:43:26] 2025-07-27 13:42:54,011 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 15:43:26] 2025-07-27 13:42:54,011 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 15:43:26] 2025-07-27 13:42:54,011 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 15:43:26] 2025-07-27 13:42:54,011 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 15:43:26] 2025-07-27 13:42:54,011 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 15:43:26] 2025-07-27 13:42:54,012 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 15:43:26] 2025-07-27 13:42:54,012 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 15:43:26] 2025-07-27 13:42:54,012 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 15:43:26] 2025-07-27 13:42:54,012 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 15:43:26] 2025-07-27 13:42:54,012 | INFO     | job 6745352376 has completed (purged errors)
[2025-07-27 15:43:26] 2025-07-27 13:42:54,012 | INFO     | overall cleanup function is called
[2025-07-27 15:43:26] 2025-07-27 13:42:55,019 | INFO     | --- collectZombieJob: --- 10, [2759473]
[2025-07-27 15:43:26] 2025-07-27 13:42:55,019 | INFO     | zombie collector waiting for pid 2759473
[2025-07-27 15:43:26] 2025-07-27 13:42:55,019 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 15:43:26] 2025-07-27 13:42:55,019 | INFO     | collected zombie processes
[2025-07-27 15:43:26] 2025-07-27 13:42:55,019 | INFO     | will attempt to kill all subprocesses of pid=2759473
[2025-07-27 15:43:26] 2025-07-27 13:42:55,063 | INFO     | process IDs to be killed: [2759473] (in reverse order)
[2025-07-27 15:43:26] 2025-07-27 13:42:55,094 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 15:43:26] 2025-07-27 13:42:55,094 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 15:43:26] 2025-07-27 13:42:55,096 | INFO     | did not find any defunct processes belonging to 2759473
[2025-07-27 15:43:26] 2025-07-27 13:42:55,097 | INFO     | did not find any defunct processes belonging to 2759473
[2025-07-27 15:43:26] 2025-07-27 13:42:55,097 | INFO     | ready for new job
[2025-07-27 15:43:26] 2025-07-27 13:42:55,097 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 15:43:26] 2025-07-27 13:42:55,098 | INFO     | ***************************************
[2025-07-27 15:43:26] 2025-07-27 13:42:55,098 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 15:43:26] 2025-07-27 13:42:55,098 | INFO     | ***************************************
[2025-07-27 15:43:26] 2025-07-27 13:42:55,098 | INFO     | 
[2025-07-27 15:43:26] 2025-07-27 13:42:55,099 | INFO     | architecture information:
[2025-07-27 15:43:26] 2025-07-27 13:42:55,099 | INFO     | executing command: cat /etc/os-release
[2025-07-27 15:43:26] 2025-07-27 13:42:55,112 | INFO     | cat /etc/os-release:
[2025-07-27 15:43:26] NAME="CentOS Linux"
[2025-07-27 15:43:26] VERSION="7 (Core)"
[2025-07-27 15:43:26] ID="centos"
[2025-07-27 15:43:26] ID_LIKE="rhel fedora"
[2025-07-27 15:43:26] VERSION_ID="7"
[2025-07-27 15:43:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 15:43:26] ANSI_COLOR="0;31"
[2025-07-27 15:43:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 15:43:26] HOME_URL="https://www.centos.org/"
[2025-07-27 15:43:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 15:43:26] 
[2025-07-27 15:43:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 15:43:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 15:43:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 15:43:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 15:43:26] 
[2025-07-27 15:43:26] 2025-07-27 13:42:55,112 | INFO     | ***************************************
[2025-07-27 15:43:26] 2025-07-27 13:42:55,615 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-27 15:43:26] 2025-07-27 13:42:55,632 | INFO     | sufficient remaining disk space (336905371648 B)
[2025-07-27 15:43:26] 2025-07-27 13:42:55,632 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 15:43:26] 2025-07-27 13:42:55,632 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 15:43:26] 2025-07-27 13:42:55,632 | INFO     | update_server=False
[2025-07-27 15:43:26] 2025-07-27 13:42:55,632 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 15:43:26] 2025-07-27 13:42:55,633 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 15:43:26] 2025-07-27 13:42:55,695 | INFO     | all data control threads have been joined
[2025-07-27 15:43:26] 2025-07-27 13:42:55,874 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 15:43:26] 2025-07-27 13:42:55,874 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 15:43:26] 2025-07-27 13:42:55,875 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 15:43:26] 2025-07-27 13:42:55,875 | INFO     | will abort loop
[2025-07-27 15:43:26] 2025-07-27 13:42:56,279 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 15:43:26] 2025-07-27 13:42:56,299 | INFO     | all job control threads have been joined
[2025-07-27 15:43:26] 2025-07-27 13:42:56,358 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 15:43:26] 2025-07-27 13:42:56,638 | INFO     | [job] retrieve thread has finished
[2025-07-27 15:43:26] 2025-07-27 13:42:56,638 | INFO     | [job] queue monitor thread has finished
[2025-07-27 15:43:26] 2025-07-27 13:42:56,700 | INFO     | [data] control thread has finished
[2025-07-27 15:43:26] 2025-07-27 13:42:56,880 | INFO     | [job] job monitor thread has finished
[2025-07-27 15:43:26] 2025-07-27 13:42:57,114 | INFO     | all payload control threads have been joined
[2025-07-27 15:43:26] 2025-07-27 13:42:57,148 | INFO     | [payload] validate_post thread has finished
[2025-07-27 15:43:26] 2025-07-27 13:42:57,305 | INFO     | [job] control thread has finished
[2025-07-27 15:43:26] 2025-07-27 13:42:57,535 | INFO     | [job] validate thread has finished
[2025-07-27 15:43:26] 2025-07-27 13:42:57,564 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 15:43:26] 2025-07-27 13:42:57,660 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 15:43:26] 2025-07-27 13:42:57,861 | INFO     | [payload] failed_post thread has finished
[2025-07-27 15:43:26] 2025-07-27 13:42:57,909 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 15:43:26] 2025-07-27 13:42:57,916 | INFO     | [data] copytool_in thread has finished
[2025-07-27 15:43:26] 2025-07-27 13:42:57,947 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 15:43:26] 2025-07-27 13:42:58,120 | INFO     | [payload] control thread has finished
[2025-07-27 15:43:26] 2025-07-27 13:42:58,285 | INFO     | [data] copytool_out thread has finished
[2025-07-27 15:43:26] 2025-07-27 13:43:00,365 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 15:43:26] 2025-07-27 13:43:01,401 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139807300310848)>', '<ExcThread(monitor, started 139806638053120)>']
[2025-07-27 15:43:26] 2025-07-27 13:43:06,427 | INFO     | all workflow threads have been joined
[2025-07-27 15:43:26] 2025-07-27 13:43:06,427 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 15:43:26] 2025-07-27 13:43:06,428 | INFO     | traces error code: 0
[2025-07-27 15:43:26] 2025-07-27 13:43:06,428 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 15:43:26] 2025-07-27 13:43:25,818 | INFO     | PID=2752856 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 15:43:26] 2025-07-27 13:43:25,818 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 15:43:26] 2025-07-27 13:43:25,818 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 15:43:26] 2025-07-27 13:43:25,818 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 15:43:26] 2025-07-27 13:43:25,818 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 15:43:26] 2025-07-27 13:43:25,818 | INFO     | [monitor] control thread has ended
[2025-07-27 15:43:26] 2025-07-27 13:43:25,894 [wrapper] ==== pilot stdout END ====
[2025-07-27 15:43:26] 2025-07-27 13:43:25,898 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 15:43:26] 2025-07-27 13:43:25,902 [wrapper] pilotpid: 2752856
[2025-07-27 15:43:26] 2025-07-27 13:43:25,906 [wrapper] Pilot exit status: 0
[2025-07-27 15:43:26] 2025-07-27 13:43:25,917 [wrapper] pandaids: 6745352376
[2025-07-27 15:43:26] 2025-07-27 13:43:25,939 [wrapper] cleanup supervisor_pilot 2772000 2752857
[2025-07-27 15:43:26] 2025-07-27 13:43:25,942 [wrapper] Test setup, not cleaning
[2025-07-27 15:43:26] 2025-07-27 13:43:25,946 [wrapper] apfmon messages muted
[2025-07-27 15:43:26] 2025-07-27 13:43:25,949 [wrapper] ==== wrapper stdout END ====
[2025-07-27 15:43:26] 2025-07-27 13:43:25,953 [wrapper] ==== wrapper stderr END ====
[2025-07-27 15:43:26]  *** Error codes and diagnostics ***
[2025-07-27 15:43:26]     "exeErrorCode": 0,
[2025-07-27 15:43:26]     "exeErrorDiag": "",
[2025-07-27 15:43:26]     "pilotErrorCode": 0,
[2025-07-27 15:43:26]     "pilotErrorDiag": "",
[2025-07-27 15:43:26]  *** Listing of results directory ***
[2025-07-27 15:43:26] total 344644
[2025-07-27 15:43:26] -rw-r--r-- 1 boinc boinc    530466 Jul 26 20:25 pilot3.tar.gz
[2025-07-27 15:43:26] -rwx------ 1 boinc boinc     36292 Jul 26 20:36 runpilot2-wrapper.sh
[2025-07-27 15:43:26] -rw-r--r-- 1 boinc boinc      5112 Jul 26 20:36 queuedata.json
[2025-07-27 15:43:26] -rw-r--r-- 1 boinc boinc       100 Jul 27 14:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 15:43:26] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 14:26 run_atlas
[2025-07-27 15:43:26] -rw-r--r-- 1 boinc boinc       105 Jul 27 14:26 job.xml
[2025-07-27 15:43:26] -rw-r--r-- 2 boinc boinc 146653430 Jul 27 14:26 EVNT.45743347._002394.pool.root.1
[2025-07-27 15:43:26] -rw-r--r-- 2 boinc boinc    542890 Jul 27 14:26 input.tar.gz
[2025-07-27 15:43:26] -rw-r--r-- 2 boinc boinc     15095 Jul 27 14:26 start_atlas.sh
[2025-07-27 15:43:26] drwxrwx--x 2 boinc boinc      4096 Jul 27 14:26 shared
[2025-07-27 15:43:26] -rw-r--r-- 1 boinc boinc         0 Jul 27 14:26 boinc_setup_complete
[2025-07-27 15:43:26] -rw-r--r-- 1 boinc boinc      6382 Jul 27 14:26 init_data.xml
[2025-07-27 15:43:26] -rw-r--r-- 1 boinc boinc         0 Jul 27 14:26 boinc_lockfile
[2025-07-27 15:43:26] -rw-r--r-- 1 boinc boinc      2563 Jul 27 14:26 pandaJob.out
[2025-07-27 15:43:26] -rw------- 1 boinc boinc    980117 Jul 27 14:26 agis_schedconf.cvmfs.json
[2025-07-27 15:43:26] -rw------- 1 boinc boinc   1593052 Jul 27 14:26 agis_ddmendpoints.agis.ALL.json
[2025-07-27 15:43:26] drwx------ 4 boinc boinc      4096 Jul 27 14:26 pilot3
[2025-07-27 15:43:26] -rw------- 1 boinc boinc 200988733 Jul 27 15:42 HITS.45743349._042446.pool.root.1
[2025-07-27 15:43:26] -rw-r--r-- 1 boinc boinc       529 Jul 27 15:42 boinc_task_state.xml
[2025-07-27 15:43:26] -rw------- 1 boinc boinc      1019 Jul 27 15:42 memory_monitor_summary.json
[2025-07-27 15:43:26] -rw------- 1 boinc boinc    244142 Jul 27 15:42 log.45743349._042446.job.log.tgz.1
[2025-07-27 15:43:26] -rw------- 1 boinc boinc        95 Jul 27 15:42 pilot_heartbeat.json
[2025-07-27 15:43:26] -rw------- 1 boinc boinc      7769 Jul 27 15:42 heartbeat.json
[2025-07-27 15:43:26] -rw-r--r-- 1 boinc boinc      8192 Jul 27 15:43 boinc_mmap_file
[2025-07-27 15:43:26] -rw-r--r-- 1 boinc boinc        27 Jul 27 15:43 wrapper_checkpoint.txt
[2025-07-27 15:43:26] -rw------- 1 boinc boinc       747 Jul 27 15:43 pilotlog.txt
[2025-07-27 15:43:26] -rw------- 1 boinc boinc    451917 Jul 27 15:43 log.45743349._042446.job.log.1
[2025-07-27 15:43:26] -rw------- 1 boinc boinc       357 Jul 27 15:43 output.list
[2025-07-27 15:43:26] -rw-r--r-- 1 boinc boinc       620 Jul 27 15:43 runtime_log
[2025-07-27 15:43:26] -rw------- 1 boinc boinc    716800 Jul 27 15:43 result.tar.gz
[2025-07-27 15:43:26] -rw-r--r-- 1 boinc boinc      8754 Jul 27 15:43 runtime_log.err
[2025-07-27 15:43:26] -rw------- 1 boinc boinc       662 Jul 27 15:43 A2TLDm1vyz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlpSLDmYmJdXo.diag
[2025-07-27 15:43:26] -rw-r--r-- 1 boinc boinc     22685 Jul 27 15:43 stderr.txt
[2025-07-27 15:43:26] HITS file was successfully produced:
[2025-07-27 15:43:26] -rw------- 1 boinc boinc 200988733 Jul 27 15:42 shared/HITS.pool.root.1
[2025-07-27 15:43:26]  *** Contents of shared directory: ***
[2025-07-27 15:43:26] total 340756
[2025-07-27 15:43:26] -rw-r--r-- 2 boinc boinc 146653430 Jul 27 14:26 ATLAS.root_0
[2025-07-27 15:43:26] -rw-r--r-- 2 boinc boinc    542890 Jul 27 14:26 input.tar.gz
[2025-07-27 15:43:26] -rw-r--r-- 2 boinc boinc     15095 Jul 27 14:26 start_atlas.sh
[2025-07-27 15:43:26] -rw------- 1 boinc boinc 200988733 Jul 27 15:42 HITS.pool.root.1
[2025-07-27 15:43:26] -rw------- 1 boinc boinc    716800 Jul 27 15:43 result.tar.gz
15:43:27 (2749161): run_atlas exited; CPU time 17358.372013
15:43:27 (2749161): called boinc_finish(0)

</stderr_txt>
]]>

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